BLASTP 2.2.1 [Apr-13-2001]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|15644876|ref|NP_207046.1| conserved hypothetical
protein [Helicobacter pylori 26695]
(362 letters)
Database: /home/scwang/download_20020708_db/nr
1,026,957 sequences; 324,149,939 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_207046.1| (NC_000915) conserved hypothetical protein... 697 0.0
ref|NP_222954.1| (NC_000921) putative [Helicobacter pylori ... 694 0.0
ref|NP_281462.1| (NC_002163) putative transmembrane protein... 380 e-104
ref|NP_294205.1| (NC_001263) B-cell receptor associated pro... 109 6e-23
ref|NP_440390.1| (NC_000911) unknown protein [Synechocystis... 96 6e-19
ref|NP_395735.1| (NC_002608) Vng6208c [Halobacterium sp. NR... 92 7e-18
ref|NP_594713.1| (NC_003424) putative prohibitin [Schizosac... 90 5e-17
ref|XP_110594.1| (XM_110594) B-cell receptor-associated pro... 83 6e-15
ref|NP_009204.1| (NM_007273) B-cell associated protein [Hom... 82 7e-15
gb|AAF68386.1|AF236370_1 (AF236370) prohibitin [Zea mays] 82 7e-15
gb|AAB82549.1| (AF022225) prohibitin [Pneumocystis carinii] 82 1e-14
ref|NP_189364.1| (NM_113642) prohibitin, putative [Arabidop... 77 2e-13
ref|NP_031557.1| (NM_007531) B-cell receptor-associated pro... 77 2e-13
gb|AAC51639.1| (U72511) B-cell receptor associated protein ... 77 2e-13
gb|AAM64845.1| (AY087293) prohibitin, putative [Arabidopsis... 77 2e-13
ref|NP_495250.1| (NM_062849) Prohibitin [Caenorhabditis ele... 77 4e-13
gb|AAA53144.1| (U16737) prohibitin [Saccharomyces cerevisiae] 75 9e-13
ref|NP_542529.1| (NC_003345) hypothetical conserved protein... 75 9e-13
ref|NP_011648.1| (NC_001139) antiproliferative protein invo... 75 9e-13
ref|NP_655931.1| (NC_003995) Band_7, SPFH domain / Band 7 f... 75 1e-12
ref|NP_199227.1| (NM_123781) prohibitin [Arabidopsis thalia... 75 2e-12
ref|NP_198893.1| (NM_123442) prohibitin (gb|AAC49691.1) [Ar... 74 3e-12
ref|NP_606613.1| (NC_003485) hypothetical phage protein [St... 74 3e-12
gb|AAF68385.1|AF236369_1 (AF236369) prohibitin [Zea mays] 74 3e-12
pir||T03843 prohibitin - common tobacco >gi|1946329|gb|AAC4... 74 3e-12
gb|AAC05496.1| (AF049901) prohibitin [Trypanosoma brucei rh... 73 4e-12
gb|EAA13889.1| (AAAB01008980) agCP8842 [Anopheles gambiae s... 73 6e-12
ref|NP_325899.1| (NC_002771) conserved hypothetical protein... 73 6e-12
ref|NP_440089.1| (NC_000911) prohibitin [Synechocystis sp. ... 72 8e-12
gb|AAF68384.1|AF236368_1 (AF236368) prohibitin [Zea mays] 71 2e-11
gb|AAF68387.1|AF236371_1 (AF236371) prohibitin [Zea mays] 71 2e-11
ref|NP_652030.1| (NM_143773) l(2)03709 gene product [Drosop... 70 3e-11
ref|NP_485338.1| (NC_003272) prohibitin homolog [Nostoc sp.... 70 3e-11
gb|AAB53231.1| (U97204) prohibitin-like molecule TC-PRO-1 [... 70 3e-11
ref|XP_080392.1| (XM_080392) l(2)03709 [Drosophila melanoga... 70 3e-11
ref|NP_171882.1| (NM_100266) putative prohibitin 2 [Arabido... 69 6e-11
gb|EAA05785.1| (AAAB01008835) agCP10268 [Anopheles gambiae ... 69 8e-11
gb|AAF57632.2| (AE003798) CG15081-PA [Drosophila melanogast... 69 8e-11
ref|NP_490929.1| (NM_058528) Y37E3.9.p [Caenorhabditis eleg... 69 8e-11
ref|NP_218553.1| (NC_000919) Lambda CII stability-governing... 69 1e-10
ref|NP_002625.1| (NM_002634) prohibitin [Homo sapiens] >gi|... 68 2e-10
ref|NP_032857.1| (NM_008831) prohibitin [Mus musculus] >gi|... 67 2e-10
ref|NP_614130.1| (NC_003551) Membrane protease subunit, sto... 66 5e-10
gb|AAK07610.1|AF319771_2 (AF319771) prohibitin 1-like prote... 66 5e-10
ref|NP_194580.1| (NM_118993) prohibitin-like protein [Arabi... 65 9e-10
ref|NP_588144.1| (NC_003421) putative prohibitin [Schizosac... 65 1e-09
gb|AAM65593.1| (AY088047) prohibitin-like protein [Arabidop... 65 1e-09
ref|NP_386230.1| (NC_003047) PUTATIVE MEMBRANE BOUND PROTEA... 65 1e-09
ref|NP_347688.1| (NC_003030) Membrane protease subunit, sto... 65 1e-09
gb|AAF53765.1| (AE003661) l(2)37Cc gene product [Drosophila... 64 2e-09
ref|NP_626066.1| (NC_003888) putative secreted protein [Str... 64 2e-09
ref|NP_179643.1| (NM_127613) putative prohibitin [Arabidops... 64 2e-09
ref|NP_532721.1| (NC_003304) HFLK protein [Agrobacterium tu... 64 3e-09
ref|NP_355013.1| (NC_003062) AGR_C_3705p [Agrobacterium tum... 64 3e-09
ref|NP_110835.1| (NC_002689) Membrane protease subunit (sto... 64 4e-09
ref|XP_137762.1| (XM_137762) similar to PROHIBITIN (B-CELL ... 63 5e-09
ref|NP_539527.1| (NC_003317) HFLK PROTEIN [Brucella meliten... 63 5e-09
ref|NP_011747.1| (NC_001139) Possible role in aging; Phb2p ... 63 5e-09
ref|NP_142449.1| (NC_000961) membrane protein [Pyrococcus h... 63 5e-09
ref|NP_394756.1| (NC_002578) membrane protein 7, erythrocyt... 63 6e-09
ref|NP_127238.1| (NC_000868) STOMATIN-LIKE PROTEIN [Pyrococ... 62 8e-09
ref|NP_196934.1| (NM_121434) prohibitin - like protein [Ara... 61 2e-08
ref|NP_600748.1| (NC_003450) COG0330:Membrane protease subu... 59 7e-08
ref|NP_229619.1| (NC_000853) ftsH protease activity modulat... 59 7e-08
ref|NP_290805.1| (NC_002655) protease specific for phage la... 58 1e-07
ref|XP_070805.1| (XM_070805) similar to prohibitin [Homo sa... 58 2e-07
ref|XP_122336.1| (XM_122336) similar to PROHIBITIN (B-CELL ... 57 3e-07
ref|NP_212337.1| (NC_001318) Lambda CII stability-governing... 57 3e-07
ref|XP_056688.1| (XM_056688) similar to prohibitin [Homo sa... 57 3e-07
ref|NP_421339.1| (NC_002696) conserved hypothetical protein... 57 3e-07
ref|NP_216004.1| (NC_000962) hypothetical protein Rv1488 [M... 57 4e-07
ref|NP_065380.1| (NC_002525) 77 pct identical to sp:YBBK_EC... 56 6e-07
ref|NP_103040.1| (NC_002678) protease subunit hflK [Mesorhi... 56 6e-07
ref|NP_343577.1| (NC_002754) Erythrocyte band 7 membrane pr... 56 6e-07
ref|NP_458800.1| (NC_003198) HflC protein [Salmonella enter... 56 6e-07
gb|AAH14228.1|AAH14228 (BC014228) Unknown (protein for MGC:... 56 7e-07
gb|AAF42676.1|AF226528_1 (AF226528) membrane protein GNA122... 56 7e-07
ref|XP_142216.1| (XM_142216) similar to PROHIBITIN (B-CELL ... 55 1e-06
ref|NP_284125.1| (NC_003116) putative periplasmic protein [... 55 1e-06
gb|AAF42675.1|AF226527_1 (AF226527) membrane protein GNA122... 55 1e-06
ref|NP_488427.1| (NC_003272) hypothetical protein [Nostoc s... 55 2e-06
ref|NP_228675.1| (NC_000853) conserved hypothetical protein... 55 2e-06
gb|AAF42660.1|AF226511_1 (AF226511) membrane protein GNA122... 55 2e-06
ref|NP_302223.1| (NC_002677) conserved hypothetical protein... 55 2e-06
gb|AAF42668.1|AF226519_1 (AF226519) membrane protein GNA122... 54 2e-06
ref|NP_561976.1| (NC_003366) conserved hypothetical protein... 54 2e-06
ref|NP_274245.1| (NC_003112) stomatin/Mec-2 family protein ... 54 4e-06
gb|AAF44771.1|AF235154_1 (AF235154) GNA1220 [Neisseria gono... 54 4e-06
ref|XP_069253.1| (XM_069253) similar to prohibitin [Homo sa... 54 4e-06
ref|NP_473293.1| (NC_000521) band 7-related protein [Plasmo... 53 5e-06
ref|NP_536400.1| (NC_003309) gp43 [Bacteriophage phiE125] >... 53 5e-06
gb|AAF42663.1|AF226514_1 (AF226514) membrane protein GNA122... 53 6e-06
ref|NP_660875.1| (NC_004061) HflC [Buchnera aphidicola str.... 52 8e-06
ref|XP_141875.1| (XM_141875) similar to PROHIBITIN (B-CELL ... 52 1e-05
gb|AAM11314.1| (AY094961) SD03319p [Drosophila melanogaster] 52 1e-05
ref|NP_611853.1| (NM_138009) CG2970 gene product [Drosophil... 52 1e-05
ref|XP_111424.1| (XM_111424) similar to PROHIBITIN (B-CELL ... 52 1e-05
ref|NP_297742.1| (NC_002488) integral membrane protease [Xy... 51 2e-05
ref|NP_492517.1| (NM_060116) erythrocyte band 7 integral me... 50 3e-05
emb|CAB64584.1| (AL135941) hypothetical protein L391.07 [Le... 50 3e-05
ref|NP_476607.1| (NM_057259) l(2)37Cc-P1; transcription uni... 50 3e-05
ref|NP_631283.1| (NC_003888) putative secreted protein [Str... 50 5e-05
ref|NP_518266.1| (NC_003295) PUTATIVE TRANSMEMBRANE PROTEIN... 50 5e-05
ref|NP_070249.1| (NC_000917) membrane protein [Archaeoglobu... 50 5e-05
ref|NP_438321.1| (NC_000907) hflK protein (hflK) [Haemophil... 49 7e-05
gb|AAF09169.1|AF065260_1 (AF065260) HflC homolog [Clostridi... 49 7e-05
ref|NP_275835.1| (NC_000916) stomatin-like protein [Methano... 49 9e-05
ref|NP_404935.1| (NC_003143) putative SPFH domain protein [... 49 9e-05
ref|NP_558821.1| (NC_003364) conserved protein (band 7 homo... 49 9e-05
ref|NP_279419.1| (NC_002607) bifunctional short chain isopr... 49 1e-04
ref|NP_038470.1| (NM_013442) stomatin (EPB72)-like 2; stoma... 49 1e-04
ref|NP_649445.1| (NM_141188) CG14644 gene product [Drosophi... 49 1e-04
ref|NP_240371.1| (NC_002528) hflC protein [Buchnera sp. APS... 49 1e-04
gb|AAF29073.1|AF161458_1 (AF161458) HSPC108 [Homo sapiens] 48 2e-04
ref|NP_438320.1| (NC_000907) hflC protein (hflC) [Haemophil... 47 3e-04
sp|P24156|L2CC_DROME L(2)37CC PROTEIN >gi|84913|pir||C25511... 47 3e-04
gb|AAH10152.1|AAH10152 (BC010152) stomatin-like 2 [Homo sap... 47 3e-04
ref|NP_245055.1| (NC_002663) HflC [Pasteurella multocida] >... 47 3e-04
gb|AAM63205.1| (AY085995) stomatin-like protein [Arabidopsi... 47 3e-04
ref|NP_245054.1| (NC_002663) HflK [Pasteurella multocida] >... 47 3e-04
ref|NP_220711.1| (NC_000963) unknown [Rickettsia prowazekii... 47 3e-04
ref|NP_075720.1| (NM_023231) stomatin-like protein 2 [Mus m... 47 4e-04
ref|NP_640072.1| (NC_003905) hypothetical transmembrane pro... 47 4e-04
gb|AAC46209.1| (AF002133) MAV266 [Mycobacterium avium] 46 6e-04
ref|NP_660876.1| (NC_004061) HflK [Buchnera aphidicola str.... 46 6e-04
pir||T05863 hypothetical protein T29A15.70 - Arabidopsis th... 46 6e-04
ref|NP_567778.1| (NM_118894) putative protein [Arabidopsis ... 46 6e-04
pir||T02246 hypothetical protein P1.11659_4 - human >gi|298... 46 8e-04
ref|NP_455096.1| (NC_003198) putative membrane protein [Sal... 45 0.001
dbj|BAB22363.1| (AK002793) data source:SPTR, source key:Q9U... 45 0.001
ref|NP_126340.1| (NC_000868) STOMATIN-LIKE PROTEIN [Pyrococ... 45 0.001
gb|AAK16087.1|AF288082_5 (AF288082) YcaD [Photorhabdus lumi... 45 0.001
ref|NP_360089.1| (NC_003103) unknown [Rickettsia conorii] >... 45 0.001
ref|NP_543057.1| (NC_003356) putative serine protease [Bact... 45 0.001
ref|NP_200221.1| (NM_124790) putative protein [Arabidopsis ... 45 0.001
ref|NP_459496.1| (NC_003197) putative inner membrane protei... 45 0.002
ref|NP_143371.1| (NC_000961) erythrocyte band7 integral mem... 45 0.002
ref|NP_359801.1| (NC_003103) protease activity modulator Hf... 45 0.002
ref|NP_634057.1| (NC_003901) stomatin-like protein [Methano... 45 0.002
ref|NP_286238.1| (NC_002655) putative protease [Escherichia... 44 0.002
ref|NP_636425.1| (NC_003902) integral membrane protease sub... 44 0.002
gb|AAF52157.1| (AE003607) CG14644 gene product [Drosophila ... 44 0.002
ref|NP_378205.1| (NC_003106) 260aa long hypothetical erythr... 44 0.002
ref|NP_579263.1| (NC_003413) stomatin homolog [Pyrococcus f... 44 0.003
gb|AAF78287.1|AF099662_1 (AF099662) merozoite surface prote... 44 0.004
ref|NP_641491.1| (NC_003919) integral membrane protease sub... 44 0.004
gb|AAM48627.1| (AE008920) SPFH domain / Band 7 family prote... 44 0.004
ref|NP_406573.1| (NC_003143) conserved hypothetical protein... 43 0.006
ref|NP_295866.1| (NC_001263) conserved hypothetical protein... 43 0.006
pir||T14692 hypothetical protein - Yersinia pestis plasmid ... 42 0.008
ref|NP_395392.1| (NC_003134) putative lipoprotein [Yersinia... 42 0.008
gb|AAB63364.1| (U97360) HFLK homolog [Treponema pallidum] 42 0.008
>ref|NP_207046.1| (NC_000915) conserved hypothetical protein [Helicobacter pylori
26695]
pir||H64550 conserved hypothetical protein HP0248 - Helicobacter pylori
(strain 26695)
gb|AAD07316.1| (AE000544) conserved hypothetical protein [Helicobacter pylori
26695]
Length = 362
Score = 697 bits (1799), Expect = 0.0
Identities = 362/362 (100%), Positives = 362/362 (100%)
Query: 1 MPIDLNEHLKKKNSQRETPTPNTPNNGGRFIPPSNSFNSKKLSVLIVIVLLGVIAFLAKP 60
MPIDLNEHLKKKNSQRETPTPNTPNNGGRFIPPSNSFNSKKLSVLIVIVLLGVIAFLAKP
Sbjct: 1 MPIDLNEHLKKKNSQRETPTPNTPNNGGRFIPPSNSFNSKKLSVLIVIVLLGVIAFLAKP 60
Query: 61 FEVISSGEIGIKITAGKYEPTPLQPGIHFFVPIIQDILIVDTRIRNINFSRTEDMGVAGK 120
FEVISSGEIGIKITAGKYEPTPLQPGIHFFVPIIQDILIVDTRIRNINFSRTEDMGVAGK
Sbjct: 61 FEVISSGEIGIKITAGKYEPTPLQPGIHFFVPIIQDILIVDTRIRNINFSRTEDMGVAGK 120
Query: 121 NQGIFRNDAINVMDSRGLTVSIELTVQYRLNPQTTPQTIATYGLSWEQKIINPVVRDVVR 180
NQGIFRNDAINVMDSRGLTVSIELTVQYRLNPQTTPQTIATYGLSWEQKIINPVVRDVVR
Sbjct: 121 NQGIFRNDAINVMDSRGLTVSIELTVQYRLNPQTTPQTIATYGLSWEQKIINPVVRDVVR 180
Query: 181 SVVGRYPAEDLPIKRNEIAALINSGINKEVSKLPNTPVELSSIQLREIVLPAKIKEQIEK 240
SVVGRYPAEDLPIKRNEIAALINSGINKEVSKLPNTPVELSSIQLREIVLPAKIKEQIEK
Sbjct: 181 SVVGRYPAEDLPIKRNEIAALINSGINKEVSKLPNTPVELSSIQLREIVLPAKIKEQIEK 240
Query: 241 VQIARQESERVKYEVERSKQEAQKQAALAKGEADANRIKAQGVADAIVIEAKAKSQANLS 300
VQIARQESERVKYEVERSKQEAQKQAALAKGEADANRIKAQGVADAIVIEAKAKSQANLS
Sbjct: 241 VQIARQESERVKYEVERSKQEAQKQAALAKGEADANRIKAQGVADAIVIEAKAKSQANLS 300
Query: 301 ISQSLSDKLLRLRQIEVQGQFNEALKTNNNAQIMLTPGGAVPNIWIDTKSKVKSSIAETK 360
ISQSLSDKLLRLRQIEVQGQFNEALKTNNNAQIMLTPGGAVPNIWIDTKSKVKSSIAETK
Sbjct: 301 ISQSLSDKLLRLRQIEVQGQFNEALKTNNNAQIMLTPGGAVPNIWIDTKSKVKSSIAETK 360
Query: 361 EP 362
EP
Sbjct: 361 EP 362
>ref|NP_222954.1| (NC_000921) putative [Helicobacter pylori J99]
pir||C71957 hypothetical protein jhp0233 - Helicobacter pylori (strain J99)
gb|AAD05819.1| (AE001461) putative [Helicobacter pylori J99]
Length = 362
Score = 694 bits (1790), Expect = 0.0
Identities = 360/362 (99%), Positives = 361/362 (99%)
Query: 1 MPIDLNEHLKKKNSQRETPTPNTPNNGGRFIPPSNSFNSKKLSVLIVIVLLGVIAFLAKP 60
MPIDLNEHLKKKNSQRE PTPNTPNNGGRFIPPSNSFNSKKLSVLIVIVLLGVIAFLAKP
Sbjct: 1 MPIDLNEHLKKKNSQRENPTPNTPNNGGRFIPPSNSFNSKKLSVLIVIVLLGVIAFLAKP 60
Query: 61 FEVISSGEIGIKITAGKYEPTPLQPGIHFFVPIIQDILIVDTRIRNINFSRTEDMGVAGK 120
FEVISSGEIGIKITAGKYEPTPLQPGIHFFVPIIQDILIVDTRIRNINFSRTEDMGVAGK
Sbjct: 61 FEVISSGEIGIKITAGKYEPTPLQPGIHFFVPIIQDILIVDTRIRNINFSRTEDMGVAGK 120
Query: 121 NQGIFRNDAINVMDSRGLTVSIELTVQYRLNPQTTPQTIATYGLSWEQKIINPVVRDVVR 180
NQGIFRNDAINVMDSRGLTVSIELTVQYRLNPQTTPQTIATYGLSWEQKIINPVVRDVVR
Sbjct: 121 NQGIFRNDAINVMDSRGLTVSIELTVQYRLNPQTTPQTIATYGLSWEQKIINPVVRDVVR 180
Query: 181 SVVGRYPAEDLPIKRNEIAALINSGINKEVSKLPNTPVELSSIQLREIVLPAKIKEQIEK 240
SVVGRYPAEDLPIKRNEIAALINSGINKEVSKLPNTPVELSSIQLREIVLPAKIKEQIEK
Sbjct: 181 SVVGRYPAEDLPIKRNEIAALINSGINKEVSKLPNTPVELSSIQLREIVLPAKIKEQIEK 240
Query: 241 VQIARQESERVKYEVERSKQEAQKQAALAKGEADANRIKAQGVADAIVIEAKAKSQANLS 300
VQIARQESERVKYEVERSKQEAQKQAALAKGEADANRIKAQGVADAIVIEAKAKSQANLS
Sbjct: 241 VQIARQESERVKYEVERSKQEAQKQAALAKGEADANRIKAQGVADAIVIEAKAKSQANLS 300
Query: 301 ISQSLSDKLLRLRQIEVQGQFNEALKTNNNAQIMLTPGGAVPNIWIDTKSKVKSSIAETK 360
ISQSLSDKLLRLRQIEVQGQFNEALKTNNNAQIMLTPGGAVPNIWIDTKSKVKSSIAE+K
Sbjct: 301 ISQSLSDKLLRLRQIEVQGQFNEALKTNNNAQIMLTPGGAVPNIWIDTKSKVKSSIAESK 360
Query: 361 EP 362
EP
Sbjct: 361 EP 362
>ref|NP_281462.1| (NC_002163) putative transmembrane protein [Campylobacter jejuni]
pir||C81445 probable transmembrane protein Cj0268c [imported] - Campylobacter
jejuni (strain NCTC 11168)
emb|CAB72736.1| (AL139074) putative transmembrane protein [Campylobacter jejuni]
Length = 362
Score = 380 bits (975), Expect = e-104
Identities = 200/360 (55%), Positives = 254/360 (70%), Gaps = 4/360 (1%)
Query: 1 MPIDLNEHLKKKNSQRETPTPNTPNNGGRFIPPSNSFNSKKLSVLIVIVLLGVIAFL--A 58
MP DLN++ KKN N N P N K S + V++ +I FL A
Sbjct: 1 MPADLNDYFNKKNGNSNNNGNNNRQNFNFKAPEFNFKGFGKFSPFVYGVII-IILFLIVA 59
Query: 59 KPFEVISSGEIGIKITAGKYEPTPLQPGIHFFVPIIQDILIVDTRIRNINFSRTEDMGV- 117
KPF VI+SGE+GIK T GKY+P PL+PG+HFF+P +Q I I+DTR+R IN++ E
Sbjct: 60 KPFMVINSGEMGIKSTTGKYDPNPLEPGLHFFLPFVQKITIIDTRVRQINYASIEGSNEN 119
Query: 118 AGKNQGIFRNDAINVMDSRGLTVSIELTVQYRLNPQTTPQTIATYGLSWEQKIINPVVRD 177
G+ ++I+V+DSRGL VSI++TVQYRLNP PQTIAT+ L+WE KII+PVVRD
Sbjct: 120 LSSGSGVINKNSISVLDSRGLPVSIDVTVQYRLNPLQVPQTIATWSLNWENKIIDPVVRD 179
Query: 178 VVRSVVGRYPAEDLPIKRNEIAALINSGINKEVSKLPNTPVELSSIQLREIVLPAKIKEQ 237
VVRSVVG+Y AE+LP RN IA I GI K + PN PVEL ++QLREI+LP+K+KEQ
Sbjct: 180 VVRSVVGKYTAEELPTNRNTIATQIEEGIRKTIEAQPNEPVELRAVQLREIILPSKVKEQ 239
Query: 238 IEKVQIARQESERVKYEVERSKQEAQKQAALAKGEADANRIKAQGVADAIVIEAKAKSQA 297
IE+VQIA+QE+ER KYEVER+ QEA K+AALA+GEA+A I A+G A A+ IEA A++ +
Sbjct: 240 IERVQIAKQEAERTKYEVERANQEALKKAALAEGEANATIISAKGKAMAVKIEADAQAYS 299
Query: 298 NLSISQSLSDKLLRLRQIEVQGQFNEALKTNNNAQIMLTPGGAVPNIWIDTKSKVKSSIA 357
N I+ SL+ LL L+QIE Q +FNEALK N +A+I LTPGGAVPNIW+DTK K S A
Sbjct: 300 NKEIANSLNTPLLNLKQIETQKEFNEALKVNQDAKIFLTPGGAVPNIWVDTKDAKKQSAA 359
>ref|NP_294205.1| (NC_001263) B-cell receptor associated protein-related protein
[Deinococcus radiodurans]
pir||E75514 B-cell receptor associated protein-related protein - Deinococcus
radiodurans (strain R1)
gb|AAF10061.1|AE001907_7 (AE001907) B-cell receptor associated protein-related protein
[Deinococcus radiodurans]
Length = 328
Score = 109 bits (272), Expect = 6e-23
Identities = 78/297 (26%), Positives = 146/297 (48%), Gaps = 17/297 (5%)
Query: 17 ETPTPNTPNNGGRFIP---PSNSFNSKKLSVLIVIVLLGVIAFLAKPFEVISSGEIGIKI 73
+ TP+ N + +P PS + ++L+ + L + L + V+ +G +G+
Sbjct: 6 DNTTPDNANPKRQRVPGVRPSGPGLTTNRALLLGGLALAAV-LLFQSVRVVPAGFVGVGF 64
Query: 74 TAGKYEPTPLQPGIHFFVPIIQDILIVDTRIRNINFSRTEDMGVAGKNQGIFRNDAINVM 133
+ + LQ G+HF VP IQ + + D R++ + S T G G AIN
Sbjct: 65 NKLSGQLSTLQEGVHFVVPGIQQLNLYDARLQEVTLSNTARDGDEG---------AINAR 115
Query: 134 DSRGLTVSIELTVQYRLNPQTTPQTIATYGLSWEQKIINPVVRDVVRSVVGRYPAEDL-P 192
GL ++ E+TVQYR++ G +++ +I P VR VR +G++ A +L
Sbjct: 116 SKEGLGITAEVTVQYRIDRNQAAALHKQLGHDYQRTVIRPQVRSKVRDAIGQFGAAELIS 175
Query: 193 IKRNEIAALINSGINKEVSKLPNTPVELSSIQLREIVLPAKIKEQIEKVQIARQESERVK 252
+R ++ + + +E S+ + L S+ LRE+ +P + + IE+ Q A Q+ K
Sbjct: 176 TERKQVEESVTKALREEFSR---NNLMLDSVLLRELKIPDSVAKAIEEKQTAEQQVAVQK 232
Query: 253 YEVERSKQEAQKQAALAKGEADANRIKAQGVADAIVIEAKAKSQANLSISQSLSDKL 309
+++++ AQ+ A+G+A A A+G A+A+ + KA + I ++++KL
Sbjct: 233 NRLQQAQISAQQAVVDAEGKAKAAVATARGEAEALSLRGKALRENPQLIQLTVAEKL 289
>ref|NP_440390.1| (NC_000911) unknown protein [Synechocystis sp. PCC 6803]
pir||S75156 hypothetical protein slr1768 - Synechocystis sp. (strain PCC 6803)
dbj|BAA17070.1| (D90903) ORF_ID:slr1768~unknown protein [Synechocystis sp. PCC
6803]
Length = 298
Score = 95.9 bits (237), Expect = 6e-19
Identities = 84/322 (26%), Positives = 151/322 (46%), Gaps = 54/322 (16%)
Query: 33 PSNSFNSKKLSVLIVIVLLGVIAF-----LAKPFEVISSGEIGIKITAGKYEPTPLQPGI 87
P N K L L+ + L + A L + VI +GE+G+ T G + TPL G+
Sbjct: 23 PENPKIPKLLRPLLFFIALLMSALFVQQSLGRALVVIPAGEVGVIETMGTVDTTPLTSGV 82
Query: 88 HFFVPIIQDILIVDTRIRNINFSRTEDMGVAGKNQGIFRNDAINVMDSRGLTVSIELTVQ 147
+F P+ + ++ TR+++I + ++ GL +I++++Q
Sbjct: 83 YFLNPLSK-VVTYSTRLQDIK-------------------ETVDTSSKEGLNFNIDVSLQ 122
Query: 148 YRLNPQTTPQTIATYGLSWEQK-IINPVVRDVVRSVVGRYPAEDL-PIKRNEIAALINSG 205
YRLNP+ + ++ G +Q+ II R ++R +Y + KR EI+ ++
Sbjct: 123 YRLNPEKAGEVFSSLGSEEQQREIIISRFRSLIRENTAKYDLSSIYGDKRAEISGVLVQS 182
Query: 206 INKEVSKLPNTPVELSSIQLREIVLPAKIKEQIEKVQIARQESERVKYEVERSKQEAQKQ 265
+ +++ L E +R ++LP I++ I+ K EVE+S Q+ Q +
Sbjct: 183 MKEQLEPLGFVVEEAL---MRNVILPENIQKAIQ-----------AKVEVEQSNQKKQLE 228
Query: 266 AALAKGEADANRIKAQGVADAIVIEAKAKSQANLSISQSLSDKLLRLRQIEVQGQFNEAL 325
A+ +A+ I+AQGVAD+ I +SQSL+D++++L+ IE + E+
Sbjct: 229 LISARRDAERKIIEAQGVADSQRI-----------LSQSLTDQIIKLKAIEATQKLAES- 276
Query: 326 KTNNNAQIMLTPGGAVPNIWID 347
N IM + G +P I D
Sbjct: 277 -PNTKVLIMGSGEGNLPIIMSD 297
>ref|NP_395735.1| (NC_002608) Vng6208c [Halobacterium sp. NRC-1]
gb|AAG20870.1| (AE005155) Vng6208c [Halobacterium sp. NRC-1]
Length = 289
Score = 92.4 bits (228), Expect = 7e-18
Identities = 69/305 (22%), Positives = 139/305 (44%), Gaps = 33/305 (10%)
Query: 36 SFNSKKLSVLIVIVLLGVIAFLAKPFEVISSGEIGIKITAGKYEPTPLQPGIHFFVPIIQ 95
S K +V+ VL+ V+ + + G I + G L+PG + VPI Q
Sbjct: 3 SLQLKVGAVVGAFVLVTVLVGGGLAWNPVQEGNIEVVKEWGASTGETLEPGANVIVPIKQ 62
Query: 96 DILIVDTRIRNINFSRTEDMGVAGKNQGIFRNDAINVMDSRGLTVSIELTVQYRLNPQTT 155
+V R + + + G R+D++ V+ + G++V++++T++YR+N
Sbjct: 63 STAVVPVRPQEYTMANEKQEGAEA------RDDSVEVLTNDGVSVNVDVTIRYRVNKTEA 116
Query: 156 PQTIATYG--LSWEQKIINPVVRDVVRSVVGRYPAEDL--PIKRNEIAALINSGINKEVS 211
Y E ++I P +DV+R+ G ++ + ++AA + + E
Sbjct: 117 ATFYDEYKDVSQAEARLIRPTTQDVLRTEGGDIDTTEIYTGAGQKQMAAAVKKALETEAV 176
Query: 212 KLPNTPVELSSIQLREIVLPAKIKEQIEKVQIARQESERVKYEVERSKQEAQKQAALAKG 271
+ + + ++Q+R I LP + + +EK ++ +Q E+ + ++ +K EA+++ AKG
Sbjct: 177 ---GSGLIIEAVQIRNIKLPGQYADAVEKKEVEKQNIEKKQNSIQVAKAEAERKRVQAKG 233
Query: 272 EADANRIKAQGVADAIVIEAKAKSQANLSISQSLSDKLLRLRQIEVQGQFNEALKTNNNA 331
EA+AN I A+ + D + +L+++R IE Q N + +
Sbjct: 234 EAEANEIVAESLKD--------------------NPELIKIRYIEALNQDNSTIYVGAGS 273
Query: 332 QIMLT 336
Q +T
Sbjct: 274 QAGIT 278
>ref|NP_594713.1| (NC_003424) putative prohibitin [Schizosaccharomyces pombe]
pir||T50096 probable prohibitin [imported] - fission yeast
(Schizosaccharomyces pombe)
emb|CAB76268.1| (AL158056) putative prohibitin [Schizosaccharomyces pombe]
Length = 282
Score = 89.7 bits (221), Expect = 5e-17
Identities = 69/262 (26%), Positives = 123/262 (46%), Gaps = 44/262 (16%)
Query: 83 LQPGIHFFVPIIQDILIVDTRIRNINFSRTEDMGVAGKNQGIFRNDAINVMDSRGLT-VS 141
+Q G HF +P +Q ++ D R R N + T S+ L VS
Sbjct: 49 VQEGTHFLIPWLQKAIVYDVRTRPRNIATTTG--------------------SKDLQMVS 88
Query: 142 IELTVQYRLNPQTTPQTIATYGLSWEQKIINPVVRDVVRSVVGRYPAEDLPIKRNEIAAL 201
+ L V +R PQ GL ++++++ + ++++SVV ++ A +L +R ++A
Sbjct: 89 LTLRVLHRPEVGMLPQIYQNLGLDYDERVLPSIGNEILKSVVAQFDAAELITQREVVSAK 148
Query: 202 INSGINKEVSKLPNTPVELSSIQLREIVLPAKIKEQIEKVQIARQESERVKYEVERSKQE 261
I + V + + L + + + + + +E+ QIA+QE+ER ++ VE+S+QE
Sbjct: 149 IRQEL---VQRATEFGIRLEDVSITHMTFGKEFTKAVERKQIAQQEAERARFLVEQSEQE 205
Query: 262 AQKQAALAKGEADANRIKAQGVADAIVIEAKAKSQANLSISQSLSDKLLRLRQIEVQGQF 321
Q AN I+A+G A+A I +KA +A L+++R++E +
Sbjct: 206 RQ-----------ANVIRAEGEAEAADIVSKALDKA--------GGALIQIRRLETSKEV 246
Query: 322 NEALKTNNNAQIMLTPGGAVPN 343
AL N AQ+ P GA N
Sbjct: 247 ATAL-ANKGAQVTYLPFGAGSN 267
>ref|XP_110594.1| (XM_110594) B-cell receptor-associated protein 37 [Mus musculus]
ref|XP_132853.1| (XM_132853) B-cell receptor-associated protein 37 [Mus musculus]
Length = 299
Score = 82.8 bits (203), Expect = 6e-15
Identities = 67/287 (23%), Positives = 131/287 (45%), Gaps = 45/287 (15%)
Query: 76 GKYEPTPLQPGIHFFVPIIQDILIVDTRIRNINFSRTEDMGVAGKNQGIFRNDAINVMDS 135
G + T L G+HF +P Q +I D R R S + S
Sbjct: 57 GVQQDTILAEGLHFRIPWFQYPIIYDIRARPRKIS--------------------SPTGS 96
Query: 136 RGLT-VSIELTVQYRLNPQTTPQTIATYGLSWEQKIINPVVRDVVRSVVGRYPAEDLPIK 194
+ L V+I L V R N Q P GL +E++++ +V +V++SVV ++ A L +
Sbjct: 97 KDLQMVNISLRVLSRPNAQELPSMYQRLGLDYEERVLPSIVNEVLKSVVAKFNASQLITQ 156
Query: 195 RNEIAALINSGINKEVSKLPNTPVELSSIQLREIVLPAKIKEQIEKVQIARQESERVKYE 254
R +++ LI + + + L + + E+ + +E Q+A+QE++R ++
Sbjct: 157 RAQVSLLIRRELTERAKDFS---LILDDVAITELSFSREYTAAVEAKQVAQQEAQRAQFL 213
Query: 255 VERSKQEAQKQAALAKGEADANRIKAQGVADAIVIEAKAKSQANLSISQSLSDKLLRLRQ 314
VE++KQE +++ A+GEA+A ++ + + S + ++LR+
Sbjct: 214 VEKAKQEQRQKIVQAEGEAEAAKMLGEAL--------------------SKNPGYIKLRK 253
Query: 315 IEVQGQFNEALKTNNNAQIMLTPGGAVPNIWIDTKSKVKSSIAETKE 361
I ++ + T+ N +I LT V N+ ++ ++ S+ + K+
Sbjct: 254 IRAAQNISKTIATSQN-RIYLTADNLVLNLQDESFTRSSDSLIKGKK 299
>ref|NP_009204.1| (NM_007273) B-cell associated protein [Homo sapiens]
gb|AAB51324.1| (U47924) B-cell receptor associated protein [Homo sapiens]
gb|AAC36005.1| (AC002397) BAP [Mus musculus]
gb|AAD38042.1|AF150962_1 (AF150962) repressor of estrogen receptor activity [Homo sapiens]
gb|AAF17231.1|AF126021_1 (AF126021) B-cell receptor-associated protein BAP37 [Homo sapiens]
gb|AAF44345.1|AF178980_1 (AF178980) D-prohibitin [Homo sapiens]
gb|AAH14766.1|AAH14766 (BC014766) B-cell associated protein [Homo sapiens]
Length = 299
Score = 82.4 bits (202), Expect = 7e-15
Identities = 67/287 (23%), Positives = 131/287 (45%), Gaps = 45/287 (15%)
Query: 76 GKYEPTPLQPGIHFFVPIIQDILIVDTRIRNINFSRTEDMGVAGKNQGIFRNDAINVMDS 135
G + T L G+HF +P Q +I D R R S + S
Sbjct: 57 GVQQDTILAEGLHFRIPWFQYPIIYDIRARPRKIS--------------------SPTGS 96
Query: 136 RGLT-VSIELTVQYRLNPQTTPQTIATYGLSWEQKIINPVVRDVVRSVVGRYPAEDLPIK 194
+ L V+I L V R N Q P GL +E++++ +V +V++SVV ++ A L +
Sbjct: 97 KDLQMVNISLRVLSRPNAQELPSMYQRLGLDYEERVLPSIVNEVLKSVVAKFNASQLITQ 156
Query: 195 RNEIAALINSGINKEVSKLPNTPVELSSIQLREIVLPAKIKEQIEKVQIARQESERVKYE 254
R +++ LI + + + L + + E+ + +E Q+A+QE++R ++
Sbjct: 157 RAQVSLLIRRELTERAKDFS---LILDDVAITELSFSREYTAAVEAKQVAQQEAQRAQFL 213
Query: 255 VERSKQEAQKQAALAKGEADANRIKAQGVADAIVIEAKAKSQANLSISQSLSDKLLRLRQ 314
VE++KQE +++ A+GEA+A ++ + + S + ++LR+
Sbjct: 214 VEKAKQEQRQKIVQAEGEAEAAKMLGEAL--------------------SKNPGYIKLRK 253
Query: 315 IEVQGQFNEALKTNNNAQIMLTPGGAVPNIWIDTKSKVKSSIAETKE 361
I ++ + T+ N +I LT V N+ ++ ++ S+ + K+
Sbjct: 254 IRAAQNISKTIATSQN-RIYLTADNLVLNLQDESFTRGSDSLIKGKK 299
>gb|AAF68386.1|AF236370_1 (AF236370) prohibitin [Zea mays]
Length = 282
Score = 82.4 bits (202), Expect = 7e-15
Identities = 60/238 (25%), Positives = 111/238 (46%), Gaps = 24/238 (10%)
Query: 51 LGVIAFLAKP-FEVISSGEIGIKITAGK-YEPTPLQPGIHFFVPIIQDILIVDTRIRNIN 108
LGV A A F + GE + + P + G H VPI+Q I D R R +
Sbjct: 22 LGVAASAASTSFYTVDGGERAVIFDRVRGVLPRTMSEGTHLLVPILQKPFIFDIRTRPHS 81
Query: 109 FSRTEDMGVAGKNQGIFRNDAINVMDSRGLTVSIELTVQYRLNPQTTPQTIATYGLSWEQ 168
FS T D + VS+ L V R + + P + GL +++
Sbjct: 82 FSSTS-----------------GTKDLQ--MVSLTLRVLSRPDVEHLPDIFTSLGLEYDE 122
Query: 169 KIINPVVRDVVRSVVGRYPAEDLPIKRNEIAALINSGINKEVSKLPNTPVELSSIQLREI 228
K++ + +V+++VV ++ A+ L +R ++AL+ + K + + L + + +
Sbjct: 123 KVLPSIGNEVLKAVVAQFNADQLLTERPHVSALVRESLTKRAREFN---IVLDEVAITHL 179
Query: 229 VLPAKIKEQIEKVQIARQESERVKYEVERSKQEAQKQAALAKGEADANRIKAQGVADA 286
+ + +EK Q+A+QE+ER ++ V R++QE + A+GE++A R+ ++ A
Sbjct: 180 AYGQEFAQAVEKKQVAQQEAERSRFLVARAEQERRAAIVRAEGESEAARLISEATTTA 237
>gb|AAB82549.1| (AF022225) prohibitin [Pneumocystis carinii]
Length = 272
Score = 82.0 bits (201), Expect = 1e-14
Identities = 56/226 (24%), Positives = 112/226 (48%), Gaps = 29/226 (12%)
Query: 86 GIHFFVPIIQDILIVDTRIRNINFSRTEDMGVAGKNQGIFRNDAINVMDSRGLT-VSIEL 144
G HF +P +Q +I D R R N + T S+ L VS+ L
Sbjct: 48 GTHFLIPWLQKAIIYDVRTRPRNIATTTG--------------------SKDLQMVSLTL 87
Query: 145 TVQYRLNPQTTPQTIATYGLSWEQKIINPVVRDVVRSVVGRYPAEDLPIKRNEIAALINS 204
V Y + PQ + GL ++++++ + +V++S+V ++ A +L +R +++ +
Sbjct: 88 RVLYHPDVMKLPQIYQSLGLDYDERVLPSIGNEVLKSIVAQFDAAELITQREIVSSKVRE 147
Query: 205 GINKEVSKLPNTPVELSSIQLREIVLPAKIKEQIEKVQIARQESERVKYEVERSKQEAQK 264
+ K S+ ++L + + + + + +E+ QIA+Q++ER K+ VE+++QE Q
Sbjct: 148 DLVKRASEFG---IQLEDVSITHMTFGQEFTKAVEQKQIAQQDAERAKFTVEKAEQERQA 204
Query: 265 QAALAKGEADANRIKA---QGVADAIVIEAKAKSQANLSISQSLSD 307
A+GEA+A + Q D ++ + +SQA+ I+ L++
Sbjct: 205 SVIRAEGEAEAAETVSKALQRAGDGLI--SIRRSQASKEIAAVLAN 248
>ref|NP_189364.1| (NM_113642) prohibitin, putative [Arabidopsis thaliana]
dbj|BAB02123.1| (AP000381) prohibitin [Arabidopsis thaliana]
Length = 279
Score = 77.4 bits (189), Expect = 2e-13
Identities = 66/257 (25%), Positives = 116/257 (44%), Gaps = 49/257 (19%)
Query: 86 GIHFFVPIIQDILIVDTRIRNINFSR---TEDMGVAGKNQGIFRNDAINVMDSRGLTVSI 142
G HF +P +Q I D R + FS T+D+ + V++
Sbjct: 58 GTHFLIPYLQTPHIYDIRTKPHTFSSKSGTKDLQM----------------------VNL 95
Query: 143 ELTVQYRLNPQTTPQTIATYGLSWEQKIINPVVRDVVRSVVGRYPAEDLPIKRNEIAALI 202
L V +R P T GL +++K++ + +V+++VV + A+ L +R +++AL+
Sbjct: 96 TLRVLFRPEVSRLPYIFQTLGLEYDEKVLPSIGNEVLKAVVANFNADQLLTERPQVSALV 155
Query: 203 NSGINKEVSKLPNTPVELSSIQLREIVLPAKIKEQIEKVQIARQESERVKYEVERSKQEA 262
+ K + +EL I + + A+ +E Q+A+QE+ER K+ V ++ QE
Sbjct: 156 RDALIKRAREFN---IELDDIAITHLSYGAEFSRAVEAKQVAQQEAERSKFVVMKADQER 212
Query: 263 QKQAALAKGEADANRIKAQGVADAIVIEAKAKSQANLSISQSLSDKLLRLRQIEVQGQFN 322
+ A+GE++A AQ ++DA AKA L+ LR+IE +
Sbjct: 213 RAAVIRAEGESEA----AQLISDA---TAKA------------GMGLIELRRIEASREVA 253
Query: 323 EALKTNNNAQIMLTPGG 339
L + N + PGG
Sbjct: 254 ATLARSPN--VAYLPGG 268
>ref|NP_031557.1| (NM_007531) B-cell receptor-associated protein 37 [Mus musculus]
pir||S46996 B-cell receptor-associated protein BAP37 - mouse
emb|CAA55350.1| (X78683) IgM B-cell receptor associated protein (BAP) 37 [Mus
musculus]
Length = 298
Score = 77.4 bits (189), Expect = 2e-13
Identities = 52/222 (23%), Positives = 110/222 (49%), Gaps = 24/222 (10%)
Query: 140 VSIELTVQYRLNPQTTPQTIATYGLSWEQKIINPVVRDVVRSVVGRYPAEDLPIKRNEIA 199
V+I L V R N Q P GL +E++++ +V +V++SVV ++ A L +R +++
Sbjct: 101 VNISLRVLSRPNAQELPSMYQRLGLDYEERVLPSIVNEVLKSVVAKFNASQLITQRAQVS 160
Query: 200 ALINSGINKEVSKLPNTPVELSSIQLREIVLPAKIKEQIEKVQIARQESERVKYEVERSK 259
LI + + + L + + E+ + +E Q+A+QE++R ++ VE++K
Sbjct: 161 LLIRRELTERAKDFS---LILDDVAITELSFSREYTAAVEAKQVAQQEAQRAQFLVEKAK 217
Query: 260 QEAQKQAALAKGEADANRIKAQGVADAIVIEAKAKSQANLSISQSLSDKLLRLRQIEVQG 319
QE +++ A+GEA+A ++ + + S + ++LR+I
Sbjct: 218 QEQRQKIVQAEGEAEAAKMLGEAL--------------------SKNPGYIKLRKIRAAQ 257
Query: 320 QFNEALKTNNNAQIMLTPGGAVPNIWIDTKSKVKSSIAETKE 361
++ + T+ N +I LT V N+ ++ ++ S+ + K+
Sbjct: 258 NISKTIATSQN-RIYLTADNLVLNLQDESFTRGSDSLIKGKK 298
>gb|AAC51639.1| (U72511) B-cell receptor associated protein [Homo sapiens]
Length = 211
Score = 77.4 bits (189), Expect = 2e-13
Identities = 52/222 (23%), Positives = 110/222 (49%), Gaps = 24/222 (10%)
Query: 140 VSIELTVQYRLNPQTTPQTIATYGLSWEQKIINPVVRDVVRSVVGRYPAEDLPIKRNEIA 199
V+I L V R N Q P GL +E++++ +V +V++SVV ++ A L +R +++
Sbjct: 14 VNISLRVLSRPNAQELPSMYQRLGLDYEERVLPSIVNEVLKSVVAKFNASQLITQRAQVS 73
Query: 200 ALINSGINKEVSKLPNTPVELSSIQLREIVLPAKIKEQIEKVQIARQESERVKYEVERSK 259
LI + + + L + + E+ + +E Q+A+QE++R ++ VE++K
Sbjct: 74 LLIRRELTERAKDFS---LILDDVAITELSFSREYTAAVEAKQVAQQEAQRAQFLVEKAK 130
Query: 260 QEAQKQAALAKGEADANRIKAQGVADAIVIEAKAKSQANLSISQSLSDKLLRLRQIEVQG 319
QE +++ A+GEA+A ++ + + S + ++LR+I
Sbjct: 131 QEQRQKIVQAEGEAEAAKMLGEAL--------------------SKNPGYIKLRKIRAAQ 170
Query: 320 QFNEALKTNNNAQIMLTPGGAVPNIWIDTKSKVKSSIAETKE 361
++ + T+ N +I LT V N+ ++ ++ S+ + K+
Sbjct: 171 NISKTIATSQN-RIYLTADNLVLNLQDESFTRGSDSLIKGKK 211
>gb|AAM64845.1| (AY087293) prohibitin, putative [Arabidopsis thaliana]
Length = 279
Score = 77.4 bits (189), Expect = 2e-13
Identities = 66/257 (25%), Positives = 116/257 (44%), Gaps = 49/257 (19%)
Query: 86 GIHFFVPIIQDILIVDTRIRNINFSR---TEDMGVAGKNQGIFRNDAINVMDSRGLTVSI 142
G HF +P +Q I D R + FS T+D+ + V++
Sbjct: 58 GTHFLIPYLQTPHIYDIRTKPHTFSSKSGTKDLQM----------------------VNL 95
Query: 143 ELTVQYRLNPQTTPQTIATYGLSWEQKIINPVVRDVVRSVVGRYPAEDLPIKRNEIAALI 202
L V +R P T GL +++K++ + +V+++VV + A+ L +R +++AL+
Sbjct: 96 TLRVLFRPEVSRLPYIFQTLGLEYDEKVLPSIGNEVLKAVVANFNADQLLTERPQVSALV 155
Query: 203 NSGINKEVSKLPNTPVELSSIQLREIVLPAKIKEQIEKVQIARQESERVKYEVERSKQEA 262
+ K + +EL I + + A+ +E Q+A+QE+ER K+ V ++ QE
Sbjct: 156 REALIKRAREFN---IELDDIAITHLSYGAEFSRAVEAKQVAQQEAERSKFVVMKADQER 212
Query: 263 QKQAALAKGEADANRIKAQGVADAIVIEAKAKSQANLSISQSLSDKLLRLRQIEVQGQFN 322
+ A+GE++A AQ ++DA AKA L+ LR+IE +
Sbjct: 213 RAAVIRAEGESEA----AQLISDA---TAKA------------GMGLIELRRIEASREVA 253
Query: 323 EALKTNNNAQIMLTPGG 339
L + N + PGG
Sbjct: 254 ATLARSPN--VAYLPGG 268
>ref|NP_495250.1| (NM_062849) Prohibitin [Caenorhabditis elegans]
sp|P50093|YWB1_CAEEL Hypothetical 31.8 kDa protein in chromosome II
gb|AAA68353.1| (U28940) Hypothetical protein T24H7.1 [Caenorhabditis elegans]
Length = 286
Score = 76.6 bits (187), Expect = 4e-13
Identities = 49/199 (24%), Positives = 96/199 (47%), Gaps = 24/199 (12%)
Query: 86 GIHFFVPIIQDILIVDTRIRNINFSRTEDMGVAGKNQGIFRNDAINVMDSRGLT-VSIEL 144
G+HF +P Q +I D R R N + S+ L V+I L
Sbjct: 58 GLHFRIPWFQYPIIYDIRARP--------------------NQIRSPTGSKDLQMVNIGL 97
Query: 145 TVQYRLNPQTTPQTIATYGLSWEQKIINPVVRDVVRSVVGRYPAEDLPIKRNEIAALINS 204
V R NP+ T G +WE++++ + +V++ VV ++ A L +R +++ L+
Sbjct: 98 RVLSRPNPEHLVHIYRTLGQNWEERVLPSICNEVLKGVVAKFNASQLITQRQQVSMLVRK 157
Query: 205 GINKEVSKLPNTPVELSSIQLREIVLPAKIKEQIEKVQIARQESERVKYEVERSKQEAQK 264
+ + + + + L + L E+ + +E Q+A QE++R + VER+KQ+ Q+
Sbjct: 158 TL---IERALDFNIILDDVSLTELAFSPQYSAAVEAKQVAAQEAQRATFYVERAKQQKQE 214
Query: 265 QAALAKGEADANRIKAQGV 283
+ A+GEA++ ++ + +
Sbjct: 215 KIVQAEGEAESAKLLGEAM 233
>gb|AAA53144.1| (U16737) prohibitin [Saccharomyces cerevisiae]
Length = 287
Score = 75.5 bits (184), Expect = 9e-13
Identities = 69/296 (23%), Positives = 128/296 (42%), Gaps = 59/296 (19%)
Query: 50 LLGVIAFLAKPFEVISSG--------------EIGIKITAGKYEPTPLQPGIHFFVPIIQ 95
L+ VI +A P +I+SG I KI K + + G HF VP +Q
Sbjct: 7 LIDVITKVALPIGIIASGIQYSMYDVKGGSRGVIFDKINGVKQQV--VGEGTHFLVPWLQ 64
Query: 96 DILIVDTRIRNINFSRTEDMGVAGKNQGIFRNDAINVMDSRGLTVSIELTVQYRLNPQTT 155
+I D R + ++ A N VS+ L V +R
Sbjct: 65 KAIIYDVRTKP-------------------KSIATNTGTKDLQMVSLTLRVLHRPEVLQL 105
Query: 156 PQTIATYGLSWEQKIINPVVRDVVRSVVGRYPAEDLPIKRNEIAALINSGINKEVSKLPN 215
P GL ++++++ + +V++S+V ++ A +L +R +I+ I KE+S N
Sbjct: 106 PAIYQNLGLDYDERVLPSIGNEVLKSIVAQFDAAELITQRE----IISQKIRKELSTRAN 161
Query: 216 T-PVELSSIQLREIVLPAKIKEQIEKVQIARQESERVKYEVERSKQEAQKQAALAKGEAD 274
++L + + + + + +E+ QIA+Q++ER K+ VE+++QE Q A+GEA+
Sbjct: 162 EFGIKLEDVSITHMTFGPEFTKAVEQKQIAQQDAERAKFLVEKAEQERQASVIRAEGEAE 221
Query: 275 ANRIKAQGVADAIVIEAKAKSQANLSISQSLSDKLLRLRQIEVQGQFNEALKTNNN 330
++ +A + D LL +R++E + L ++N
Sbjct: 222 GAECISKALA-------------------KVGDGLLLIRRLEASKDIAQTLANSSN 258
>ref|NP_542529.1| (NC_003345) hypothetical conserved protein COG330 [Halovirus HF2]
gb|AAL54952.1| (AF222060) hypothetical conserved protein COG330 [Halovirus HF2]
Length = 291
Score = 75.5 bits (184), Expect = 9e-13
Identities = 59/252 (23%), Positives = 118/252 (46%), Gaps = 11/252 (4%)
Query: 36 SFNSKKLSVLIVIVLLGVIAFLAKPFEVISSGEIGIKITAGKYEPTPLQPGIHFFVPIIQ 95
+F K + V++ +LL A +E + G + + G LQPG ++ P+
Sbjct: 5 TFKLKAVGVVMAFMLLTAGAVGGMAWEPVDEGNVAVVTEWGDATGEVLQPGANWITPVKH 64
Query: 96 DILIVDTRIRNINFSRTEDMGVAGKNQGIFRNDAINVMDSRGLTVSIELTVQYRL--NPQ 153
+ + + TR + ++ T + G K+ D I V + G+ + ++TV+Y+L +P+
Sbjct: 65 NTVELSTRQQA--YTMTSNPGEGAKDYA----DPIVVKTADGVEATFDVTVRYQLPNDPE 118
Query: 154 TTPQTIATYGL--SWEQKIINPVVRDVVRSVVGRYPAEDLPIKRNEIAALINSGINKEVS 211
Y + E+++I + + G ++ + +++ E
Sbjct: 119 AVTDFYTDYRTLENAEKRMIRTTLAKQMLVTTGSMKTSEVYTSAGQTEITMDARSQLE-E 177
Query: 212 KLPNTPVELSSIQLREIVLPAKIKEQIEKVQIARQESERVKYEVERSKQEAQKQAALAKG 271
K +T + L S+Q+ ++ P ++ I + ++A+Q + + EVE +KQEA+ Q A+G
Sbjct: 178 KFADTGLVLDSVQITKVNFPQSYEKSITEKEVAQQRELKAEAEVEVAKQEARAQIEKARG 237
Query: 272 EADANRIKAQGV 283
EA +N I AQ V
Sbjct: 238 EAKSNEIVAQSV 249
>ref|NP_011648.1| (NC_001139) antiproliferative protein involved in determination of
replicative life span; Phb1p [Saccharomyces cerevisiae]
sp|P40961|PHB_YEAST PROHIBITIN
pir||S64441 prohibitin PHB1 - yeast (Saccharomyces cerevisiae)
emb|CAA97145.1| (Z72917) ORF YGR132c [Saccharomyces cerevisiae]
Length = 287
Score = 75.5 bits (184), Expect = 9e-13
Identities = 57/246 (23%), Positives = 111/246 (44%), Gaps = 43/246 (17%)
Query: 86 GIHFFVPIIQDILIVDTRIRNINFSRTEDMGVAGKNQGIFRNDAINVMDSRGLTVSIELT 145
G HF VP +Q +I D R + ++ A N VS+ L
Sbjct: 55 GTHFLVPWLQKAIIYDVRTKP-------------------KSIATNTGTKDLQMVSLTLR 95
Query: 146 VQYRLNPQTTPQTIATYGLSWEQKIINPVVRDVVRSVVGRYPAEDLPIKRNEIAALINSG 205
V +R P GL ++++++ + +V++S+V ++ A +L +R +I+
Sbjct: 96 VLHRPEVLQLPAIYQNLGLDYDERVLPSIGNEVLKSIVAQFDAAELITQRE----IISQK 151
Query: 206 INKEVSKLPNT-PVELSSIQLREIVLPAKIKEQIEKVQIARQESERVKYEVERSKQEAQK 264
I KE+S N ++L + + + + + +E+ QIA+Q++ER K+ VE+++QE Q
Sbjct: 152 IRKELSTRANEFGIKLEDVSITHMTFGPEFTKAVEQKQIAQQDAERAKFLVEKAEQERQA 211
Query: 265 QAALAKGEADANRIKAQGVADAIVIEAKAKSQANLSISQSLSDKLLRLRQIEVQGQFNEA 324
A+GEA++ ++ +A + D LL +R++E +
Sbjct: 212 SVIRAEGEAESAEFISKALA-------------------KVGDGLLLIRRLEASKDIAQT 252
Query: 325 LKTNNN 330
L ++N
Sbjct: 253 LANSSN 258
>ref|NP_655931.1| (NC_003995) Band_7, SPFH domain / Band 7 family [Bacillus anthracis
A2012] [Bacillus anthracis str. A2012]
Length = 321
Score = 75.1 bits (183), Expect = 1e-12
Identities = 62/306 (20%), Positives = 138/306 (44%), Gaps = 35/306 (11%)
Query: 45 LIVIVLLGVIAFLAKPFEVISSGEIGIKITAGKYEPTPLQPGIHFFVPIIQDILIV-DTR 103
L +I L V+ F+A ++I ++G+ GK++ +QPG++ +PI+ + + D R
Sbjct: 6 LTIIFALIVVTFIALTIKIIPQQKVGVVERFGKFQRV-MQPGLNLLIPIVDRVRVYHDLR 64
Query: 104 IRNINFSRTEDMGVAGKNQGIFRNDAINVMDSRGLTVSIELTVQYRLNPQTTPQTIATYG 163
I+ N + V+ + V I+ + Y Q +ATYG
Sbjct: 65 IQQTNVPPQK------------------VITKDNVQVEIDTIIFY----QVVEPELATYG 102
Query: 164 LSWEQKIINPVVRDVVRSVVGRYPAEDLPIKRNEIAALINSGINKEVSKLPNTPVELSSI 223
+S + + + +R ++G+ ++ R +I+ I +++ K V + +
Sbjct: 103 ISNYEYGVRNITSATMRQIIGKMELDETLSGREKISTEIRLALDEATEKWG---VRIERV 159
Query: 224 QLREIVLPAKIKEQIEKVQIARQESERVKYEVERSKQ--------EAQKQAALAKGEADA 275
++ +I P ++ +EK A + + E E +KQ E Q + +A+G+ +A
Sbjct: 160 EVVDINPPKDVQASMEKQMKAERNKRAIILEAEAAKQDKVLRAEGEKQSKILMAEGDKEA 219
Query: 276 NRIKAQGVADAIVIEAKAKSQANLSISQSLSDKLLRLRQIEVQGQFNEALKTNNNAQIML 335
+A+G+ +A +EA+ +++A I+++ +++ LR+ + + + A++
Sbjct: 220 RIREAEGIKEAKELEAQGEARAIEEIAKAEQNRIELLREANLDERILAYKSFESLAEVAK 279
Query: 336 TPGGAV 341
P V
Sbjct: 280 GPANKV 285
>ref|NP_199227.1| (NM_123781) prohibitin [Arabidopsis thaliana]
dbj|BAB10981.1| (AB005239) prohibitin [Arabidopsis thaliana]
Length = 278
Score = 74.7 bits (182), Expect = 2e-12
Identities = 53/221 (23%), Positives = 103/221 (45%), Gaps = 22/221 (9%)
Query: 86 GIHFFVPIIQDILIVDTRIRNINFSRTEDMGVAGKNQGIFRNDAINVMDSRGLTVSIELT 145
G HF +P+ + +I D R R +N ND TV+I L
Sbjct: 62 GTHFKIPLFERAIIYDVRSRPYV-----------ENSQTGSNDL--------QTVTIGLR 102
Query: 146 VQYRLNPQTTPQTIATYGLSWEQKIINPVVRDVVRSVVGRYPAEDLPIKRNEIAALINSG 205
V R P+ T G ++ ++++ ++ + +++VV +Y A L +R ++ I
Sbjct: 103 VLTRPMGDRLPEIYRTLGQNYGERVLPSIINETLKAVVAQYNASHLITQREAVSREIRKI 162
Query: 206 INKEVSKLPNTPVELSSIQLREIVLPAKIKEQIEKVQIARQESERVKYEVERSKQEAQKQ 265
+ + +K + L + + + + E IEK Q+A QE+ER K+ VE+++Q+ +
Sbjct: 163 VTERAAKFN---IALDDVSITNLKFGKEFTEAIEKKQVAAQEAERAKFIVEKAEQDKKSA 219
Query: 266 AALAKGEADANRIKAQGVADAIVIEAKAKSQANLSISQSLS 306
A+GEA + ++ Q +A+ K +A I+Q+++
Sbjct: 220 IIRAQGEAKSAQLIGQAIANNEAFITLRKIEAAREIAQTIA 260
>ref|NP_198893.1| (NM_123442) prohibitin (gb|AAC49691.1) [Arabidopsis thaliana]
gb|AAC49691.1| (U69155) prohibitin [Arabidopsis thaliana]
gb|AAD00157.1| (U66593) prohibitin 3 [Arabidopsis thaliana]
dbj|BAB08838.1| (AB015470) prohibitin [Arabidopsis thaliana]
gb|AAK96690.1| (AY054499) prohibitin [Arabidopsis thaliana]
gb|AAM47950.1| (AY114631) prohibitin [Arabidopsis thaliana]
gb|AAM65180.1| (AY087641) prohibitin [Arabidopsis thaliana]
Length = 277
Score = 73.9 bits (180), Expect = 3e-12
Identities = 63/257 (24%), Positives = 117/257 (45%), Gaps = 49/257 (19%)
Query: 86 GIHFFVPIIQDILIVDTRIRNINFSR---TEDMGVAGKNQGIFRNDAINVMDSRGLTVSI 142
G HF +PI+Q I D R + FS T+D+ + V++
Sbjct: 58 GTHFLIPILQRPHIFDIRTKPHTFSSISGTKDLQM----------------------VNL 95
Query: 143 ELTVQYRLNPQTTPQTIATYGLSWEQKIINPVVRDVVRSVVGRYPAEDLPIKRNEIAALI 202
L V R P T GL +++K++ + +V+++VV ++ A+ L +R ++AL+
Sbjct: 96 TLRVLSRPEVSRLPYIFQTLGLEYDEKVLPSIGNEVLKAVVAQFNADQLLTERPHVSALV 155
Query: 203 NSGINKEVSKLPNTPVELSSIQLREIVLPAKIKEQIEKVQIARQESERVKYEVERSKQEA 262
+ +++ + + L + + + + +E+ Q+A+QE+ER K+ V ++ QE
Sbjct: 156 RESL---ITRAKDFNIVLDDVAITHLSYGVEFSRAVEQKQVAQQEAERSKFVVMKADQER 212
Query: 263 QKQAALAKGEADANRIKAQGVADAIVIEAKAKSQANLSISQSLSDKLLRLRQIEVQGQFN 322
+ A+GE++A AQ ++DA AKA L+ LR+IE +
Sbjct: 213 RAAVIRAEGESEA----AQLISDA---TAKA------------GMGLIELRRIEASREIA 253
Query: 323 EALKTNNNAQIMLTPGG 339
L + N + PGG
Sbjct: 254 STLARSPN--VAYLPGG 268
>ref|NP_606613.1| (NC_003485) hypothetical phage protein [Streptococcus pyogenes
MGAS8232]
gb|AAL97112.1| (AE009980) hypothetical phage protein [Streptococcus pyogenes
MGAS8232]
Length = 275
Score = 73.9 bits (180), Expect = 3e-12
Identities = 70/283 (24%), Positives = 135/283 (46%), Gaps = 36/283 (12%)
Query: 40 KKLSVLIVIVLLGVIAFLAKPFEVISSGEIGIKITAGK-YEPTPLQPGIHFFVPIIQDIL 98
+KL + +++G + F I + +G+K++A + L G H VP I I
Sbjct: 5 EKLVFTVAFLIIGGVFFRTTAVTRIPANTVGVKVSATSGVQKQTLSTGYHLKVPFIDKIY 64
Query: 99 IVDTRIRNINFSRTEDMGVAGKNQGIFRNDAINVMDSRGLTVSIELTVQYRLNPQTTPQT 158
+ T ++ Q + D++ L +++ V+YR++ +
Sbjct: 65 KMPTSVQ----------------QKKIKKITTQTEDAQWLDTTLD--VKYRVSEKNAMNV 106
Query: 159 IATYGL--SWEQKIINPVVRDVVRSVVGRYPA-EDLPIKRNEIAALINSGINKEVSKLPN 215
Y + + +I V+ V V Y E L KRNE+ A I +++ ++K
Sbjct: 107 FKDYQSMENVNKSLIKAAVQRAVEQVTVNYDIYEALGSKRNELYAEIEKSLSERLAK--- 163
Query: 216 TPVELSSIQLREIVLPAKIKEQIEKVQIARQESERVKYEVERSKQEAQKQAALAKGEADA 275
+EL S+ L + ++IEK + ES + K +V+ +KQ+ +K AK EA+
Sbjct: 164 ESIELVSVTLTD----QDAGDEIEKA--IKDESVKQK-QVDSAKQDKEK----AKIEAET 212
Query: 276 NRIKAQGVADAIVIEAKAKSQANLSISQSLSDKLLRLRQIEVQ 318
+I+AQ ADA VI+AK ++++N + + S++D L+++++ E +
Sbjct: 213 KQIQAQAEADAQVIKAKGEAESNNTKAASITDNLIKMKEAEAR 255
>gb|AAF68385.1|AF236369_1 (AF236369) prohibitin [Zea mays]
Length = 284
Score = 73.6 bits (179), Expect = 3e-12
Identities = 51/210 (24%), Positives = 100/210 (47%), Gaps = 28/210 (13%)
Query: 80 PTPLQPGIHFFVPIIQDILIVDTRIRNINFSR---TEDMGVAGKNQGIFRNDAINVMDSR 136
P + G HF VP +Q I D R R NFS T+D+ +
Sbjct: 52 PETVGEGTHFLVPWLQKPFIFDIRTRPHNFSSNSGTKDLQM------------------- 92
Query: 137 GLTVSIELTVQYRLNPQTTPQTIATYGLSWEQKIINPVVRDVVRSVVGRYPAEDLPIKRN 196
V++ L + R + Q P + GL ++ K++ + +V+++VV ++ A+ L R
Sbjct: 93 ---VNLTLRLLSRPDVQHLPTIFTSLGLEYDDKVLPSIGNEVLKAVVAQFNADQLLTDRP 149
Query: 197 EIAALINSGINKEVSKLPNTPVELSSIQLREIVLPAKIKEQIEKVQIARQESERVKYEVE 256
++AL+ + + + + L + + + + +EK Q+A+QE+ER K+ V
Sbjct: 150 HVSALVRDALIRRAREFN---IILDDVAITHLSYGIEFSLAVEKKQVAQQEAERSKFLVA 206
Query: 257 RSKQEAQKQAALAKGEADANRIKAQGVADA 286
+++QE + A+GE+++ R+ ++ A A
Sbjct: 207 KAEQERRAAIVRAEGESESARLISEATAMA 236
>pir||T03843 prohibitin - common tobacco
gb|AAC49690.1| (U69154) prohibitin [Nicotiana tabacum]
Length = 279
Score = 73.6 bits (179), Expect = 3e-12
Identities = 48/203 (23%), Positives = 102/203 (49%), Gaps = 26/203 (12%)
Query: 86 GIHFFVPIIQDILIVDTRIRNINFSRTEDMGVAGKNQGIFRNDAINVMDSRGLTVSIELT 145
G HF VP +Q I D R R FS +V ++ L + + LT
Sbjct: 58 GTHFLVPWLQKPFIFDIRTRPHTFS--------------------SVSGTKDLQM-VHLT 96
Query: 146 VQYRLNPQTT--PQTIATYGLSWEQKIINPVVRDVVRSVVGRYPAEDLPIKRNEIAALIN 203
++ P+ P T GL +++K++ + +V+++VV ++ A+ L +R +++AL+
Sbjct: 97 LRVLSRPEVARLPAIFKTLGLEYDEKVLPSIGNEVLKAVVAQFNADQLLTERPQVSALVR 156
Query: 204 SGINKEVSKLPNTPVELSSIQLREIVLPAKIKEQIEKVQIARQESERVKYEVERSKQEAQ 263
+ + + + + L + + + A+ + +E+ Q+A+QE+ER K+ V +++QE +
Sbjct: 157 ESL---IRRAKDFNIVLDDVAITHLSYGAEFSKAVEQKQVAQQEAERSKFVVMKAEQERR 213
Query: 264 KQAALAKGEADANRIKAQGVADA 286
A+GE+++ ++ + A A
Sbjct: 214 AAIIRAEGESESAKLISDATAAA 236
>gb|AAC05496.1| (AF049901) prohibitin [Trypanosoma brucei rhodesiense]
Length = 277
Score = 73.2 bits (178), Expect = 4e-12
Identities = 56/218 (25%), Positives = 104/218 (47%), Gaps = 26/218 (11%)
Query: 140 VSIELTVQYRLNPQTTPQTIATYGLSWEQKIINPVVRDVVRSVVGRYPAEDLPIKRNEIA 199
V+I L V +R PQ +G+ ++++I+ + +++++VV Y AE+L KR+ ++
Sbjct: 85 VNISLRVLFRPQTDRLPQIYREFGMDYDERILPSISNEILKAVVAEYKAEELIQKRDVVS 144
Query: 200 ALINSGINKEVSKLPNTPVELSSIQLREIVLPAKIKEQIEKVQIARQESERVKYEVERSK 259
A I + +VS+ + L + L +I + +E+ Q+A+QE+ER +Y V ++
Sbjct: 145 ARIYQVMQSKVSQF---GLVLEDLSLVDIQFGKEFMVAVEQKQVAQQEAERFRYVVLENE 201
Query: 260 QEAQKQAALAKGEADANRIKAQGVADAIVIEAKAKSQANLSISQSLSDKLLRLRQIEVQG 319
Q+ + A+GEA++ R+ ++ + Q LL LR+IE
Sbjct: 202 QKRRAAVVRAEGEAESARLISEAI-------------------QRSGGGLLELRRIEAAV 242
Query: 320 QFNEALKTNNNAQIMLTPGGAVPNIWIDTKSKVKSSIA 357
L N + PGG+ N+ + KS S A
Sbjct: 243 DIASKLIPMRN--VTFLPGGS--NMLLHMKSHQASEQA 276
>gb|EAA13889.1| (AAAB01008980) agCP8842 [Anopheles gambiae str. PEST]
Length = 323
Score = 72.8 bits (177), Expect = 6e-12
Identities = 57/228 (25%), Positives = 110/228 (48%), Gaps = 24/228 (10%)
Query: 86 GIHFFVPIIQDILIVDTRIRNINFSRTEDMGVAGKNQGIFRNDAINVMDSRGLT-VSIEL 144
G+HF VP Q +I D R R S + S+ L V+I L
Sbjct: 93 GLHFRVPWFQYPIIYDIRSRPRKIS--------------------SPTGSKDLQMVNISL 132
Query: 145 TVQYRLNPQTTPQTIATYGLSWEQKIINPVVRDVVRSVVGRYPAEDLPIKRNEIAALINS 204
V R + + P G +++K++ + +V++SVV ++ A L +R +++ LI
Sbjct: 133 RVLSRPDARKLPVMYRQLGQDYDEKVLPSICNEVLKSVVAKFNASQLITQRQQVSLLIRR 192
Query: 205 GINKEVSKLPNTPVELSSIQLREIVLPAKIKEQIEKVQIARQESERVKYEVERSKQEAQK 264
+ V + + + L + L E+ + +E Q+A+QE+++ + VER+KQE Q+
Sbjct: 193 EL---VERAADFNIILDDVSLTELSFGREYTAAVESKQVAQQEAQQAAFLVERAKQERQQ 249
Query: 265 QAALAKGEADANRIKAQGVADAIVIEAKAKSQANLSISQSLSDKLLRL 312
+ A+GEA+A ++ VA+ K +A +I++++++ R+
Sbjct: 250 KIVQAEGEAEAAKMLGIAVAENPGYLKLRKIRAAQNIARTIANSQNRV 297
>ref|NP_325899.1| (NC_002771) conserved hypothetical protein [Mycoplasma pulmonis]
emb|CAC13241.1| (AL445563) conserved hypothetical protein [Mycoplasma pulmonis]
Length = 309
Score = 72.8 bits (177), Expect = 6e-12
Identities = 75/313 (23%), Positives = 145/313 (45%), Gaps = 54/313 (17%)
Query: 45 LIVIVLLGVIAF----LAKPF--EVISSGEIGIKITAGKYEPTPLQPGIHFFVPIIQDIL 98
+I++++LGVI L PF +++S E I G Y T L GIHF +PII
Sbjct: 5 IILLIVLGVIFLFCLVLVLPFSLKIVSQTEFIIVERLGTYRKT-LTNGIHFIIPIID--- 60
Query: 99 IVDTRIRNINFSRTEDMGVAGKNQGIFRNDAIN-----VMDSRGLTVSIELTVQYRLNPQ 153
+++G F+ ++ V+ V ++ + + Q
Sbjct: 61 -------------------IPRSRGNFKEQVLDFKPQDVITKDNAIVKVDSVIFF----Q 97
Query: 154 TTPQTIATYGLSWEQKIINPVVRDVVRSVVGRYPAEDLPIKRNEIAALINSGINKEVSKL 213
T + TYG + K + + +R+++G + ++L R+ + A + + I+
Sbjct: 98 ITDAKLYTYGAEYPIKALENLSYTTLRNLLGEFELDELLTSRDIVNAKLTTTIDLASD-- 155
Query: 214 PNTPVELSSIQLREIVLPAKIKEQIEKVQIARQESERVKYEVERSKQEA------QKQAA 267
+ +++ ++L+ I PA IK +EK A +E E + ++ A Q++AA
Sbjct: 156 -SWGIKVHRVELKTIDPPADIKNAMEKQLRAEREKRANILEAQGQREAAILEAQGQREAA 214
Query: 268 L--AKGEADANRIKAQGVADAIVIEAKAKSQA-NLSISQSLSDKLLRLRQIEVQGQFNEA 324
+ A+GE +A +KAQG +A ++EA+ + Q+ +L S +S ++L + IE G+
Sbjct: 215 ILAAQGEKEAAILKAQGQREAAILEAEGQKQSIHLLNSSDISKEVLTWKSIEQLGK---- 270
Query: 325 LKTNNNAQIMLTP 337
+ N +I++ P
Sbjct: 271 IADGNATKIIIPP 283
>ref|NP_440089.1| (NC_000911) prohibitin [Synechocystis sp. PCC 6803]
pir||S74617 prohibitin phb - Synechocystis sp. (strain PCC 6803)
dbj|BAA16769.1| (D90900) prohibitin [Synechocystis sp. PCC 6803]
Length = 282
Score = 72.4 bits (176), Expect = 8e-12
Identities = 62/239 (25%), Positives = 108/239 (44%), Gaps = 28/239 (11%)
Query: 46 IVIVLLGVIAFLAKPFEVISSGEIGIKITAGKYEPTPLQPGIHFFVPIIQDILIVDTRIR 105
++ LL +++F F VI+ G+ G+ GK + L GIHF P++ + I D ++
Sbjct: 17 LIAALLVLLSF--NSFVVINPGQAGVLSVLGKAQDGALLEGIHFKPPLVSSVDIYDVTVQ 74
Query: 106 NINF---SRTEDMGVAGKNQGIFRNDAINVMDSRGLTVSIELTVQYRLNPQTTPQTIATY 162
S T+D+ Q + + AIN V+I T Q T Q I
Sbjct: 75 KFEVPAQSSTKDL------QDLSASFAINFRLDPTEVVTIRRT-------QGTLQNIVA- 120
Query: 163 GLSWEQKIINPVVRDVVRSVVGRYPAEDLPIKRNEIAALINSGINKEVSKLPNTPVELSS 222
KII P ++ + R E+ KR+E+ ++ +N + K ++ S
Sbjct: 121 ------KIIAPQTQESFKIAAARRTVEEAITKRSELKEDFDNALNSRLEKYGIIVLDTSV 174
Query: 223 IQLREIVLPAKIKEQIEKVQIARQESERVKYEVERSKQEAQKQAALAKGEADANRIKAQ 281
+ L + + +E+ QIA Q ++R Y + ++Q+AQ AKG+A+A R+ A+
Sbjct: 175 VDL---AFSPEFAKAVEEKQIAEQRAQRAVYVAQEAEQQAQADINRAKGKAEAQRLLAE 230
>gb|AAF68384.1|AF236368_1 (AF236368) prohibitin [Zea mays]
Length = 289
Score = 71.2 bits (173), Expect = 2e-11
Identities = 61/247 (24%), Positives = 109/247 (43%), Gaps = 35/247 (14%)
Query: 86 GIHFFVPIIQDILIVDTRIRNINFSRTEDMGVAGKNQGIFRNDAINVMDSRGLT-VSIEL 144
G HF +P + +I D R R N + SR L V I L
Sbjct: 63 GTHFMIPWFERPIIYDVRARP--------------------NLVESTSGSRDLQMVKIGL 102
Query: 145 TVQYRLNPQTTPQTIATYGLSWEQKIINPVVRDVVRSVVGRYPAEDLPIKRNEIAALINS 204
V R P+ P T G ++ ++++ ++ + +++VV +Y A L +R ++ I
Sbjct: 103 RVLTRPMPERLPHIYRTLGENFNERVLPSIIHETLKAVVAQYNASQLITQRETVSREIRK 162
Query: 205 GINKEVSKLPNTPVELSSIQLREIVLPAKIKEQIEKVQIARQESERVKYEVERSKQEAQK 264
I E ++ N + L + + + + IE Q+A QE+ER K+ VE+++Q+ +
Sbjct: 163 -ILTERARFFN--IALDDVSITSLSFGKEFTHAIEAKQVAAQEAERAKFIVEKAEQDKRS 219
Query: 265 QAALAKGEADANRIKAQGVADAIVIEAKAKSQANLSISQSLS-----------DKLLRLR 313
A+GEA + + Q +A+ A + +A IS ++S D LL L+
Sbjct: 220 AIIRAQGEAKSAELIGQAIANNPAFLALRQIEAAREISHTISASANKVFLDSNDLLLNLQ 279
Query: 314 QIEVQGQ 320
Q+ V +
Sbjct: 280 QLNVSSK 286
>gb|AAF68387.1|AF236371_1 (AF236371) prohibitin [Zea mays]
Length = 289
Score = 70.9 bits (172), Expect = 2e-11
Identities = 68/293 (23%), Positives = 123/293 (41%), Gaps = 38/293 (12%)
Query: 43 SVLIVIVLLGVIAFLA--KPFEVISSGEIGIKITAGKYEPTPLQP-GIHFFVPIIQDILI 99
S L+ + LLG A F + G I + + P G H +P I+ +I
Sbjct: 17 SALVKVALLGGAGLYAVLNSFYNVEGGHRAIVFNRLEGIKDKVYPEGTHLMIPWIERPII 76
Query: 100 VDTRIRNINFSRTEDMGVAGKNQGIFRNDAINVMDSRGLT-VSIELTVQYRLNPQTTPQT 158
D R R N + SR L V I L V R P P+
Sbjct: 77 YDVRARP--------------------NLVESTSGSRDLQMVRIGLRVLTRPMPDQLPKI 116
Query: 159 IATYGLSWEQKIINPVVRDVVRSVVGRYPAEDLPIKRNEIAALINSGINKEVSKLPNTPV 218
G ++ ++++ ++ + +++VV +Y A L +R ++ I + + + N +
Sbjct: 117 YRNLGENFNERVLPSIIHETLKAVVAQYNASQLITQREAVSREIRKILTERAN---NFNI 173
Query: 219 ELSSIQLREIVLPAKIKEQIEKVQIARQESERVKYEVERSKQEAQKQAALAKGEADANRI 278
L + + + + IE Q+A QE+ER K+ VE+++Q+ + A+GEA + +
Sbjct: 174 ALDDVSITSLSFGKEFTHAIEAKQVAAQEAERAKFIVEKAEQDKRSAVIRAQGEAKSAEL 233
Query: 279 KAQGVADAIVIEAKAKSQANLSISQSLS-----------DKLLRLRQIEVQGQ 320
Q +A+ A + +A IS +++ D LL L+Q+ V G+
Sbjct: 234 IGQAIANNPAFLALRQIEAAREISHTMAASSNKVFLDSRDLLLGLQQLNVGGK 286
>ref|NP_652030.1| (NM_143773) l(2)03709 gene product [Drosophila melanogaster]
gb|AAL29056.1| (AY061508) LD46344p [Drosophila melanogaster]
Length = 299
Score = 70.5 bits (171), Expect = 3e-11
Identities = 43/167 (25%), Positives = 88/167 (51%), Gaps = 3/167 (1%)
Query: 140 VSIELTVQYRLNPQTTPQTIATYGLSWEQKIINPVVRDVVRSVVGRYPAEDLPIKRNEIA 199
++I L V R + P G+ +++K++ + +V++SV+ ++ A L +R +++
Sbjct: 103 INISLRVLSRPDSLNLPYLHKQLGVDYDEKVLPSICNEVLKSVIAKFNASQLITQRQQVS 162
Query: 200 ALINSGINKEVSKLPNTPVELSSIQLREIVLPAKIKEQIEKVQIARQESERVKYEVERSK 259
LI + V + + + L + L E+ + IE Q+A+QE++R + VER+K
Sbjct: 163 LLIRKEL---VERARDFNIILDDVSLTELSFGKEYTAAIEAKQVAQQEAQRAVFFVERAK 219
Query: 260 QEAQKQAALAKGEADANRIKAQGVADAIVIEAKAKSQANLSISQSLS 306
QE Q++ A+GEA+A ++ V K +A SI+++++
Sbjct: 220 QEKQQKIVQAEGEAEAAKMLGLAVKQNPAYLKLRKLRAAQSIARTIA 266
>ref|NP_485338.1| (NC_003272) prohibitin homolog [Nostoc sp. PCC 7120]
dbj|BAB73252.1| (AP003585) ORF_ID:alr1295~prohibitin homolog [Nostoc sp. PCC 7120]
Length = 270
Score = 70.5 bits (171), Expect = 3e-11
Identities = 60/242 (24%), Positives = 106/242 (43%), Gaps = 33/242 (13%)
Query: 44 VLIVIVLLGVIAFLAKPFEVISSGEIGIKITAGKYEPTPLQPGIHFFVPIIQDILIVDTR 103
++ +IV++G+ +F+ +I+ G+ G+ GK L GIH P+I I + D
Sbjct: 5 LVAIIVIIGLNSFI-----IINPGQAGVLSILGKARDGALLEGIHLKPPLISAIDVYDLT 59
Query: 104 IRNINF---SRTEDMGVAGKNQGI-FRNDAINVMDSRGLTVSIELTVQYRLNPQTTPQTI 159
++ S T+D+ I FR D I V+D R ++E V
Sbjct: 60 VQKFEVPAESSTKDLQNLSARFAINFRLDPIQVVDVRRKQGTLENIVS------------ 107
Query: 160 ATYGLSWEQKIINPVVRDVVRSVVGRYPAEDLPIKRNEIAALINSGINKEVSKLPNTPVE 219
KII P ++ + R E+ KR+E+ ++ + + K ++
Sbjct: 108 ---------KIIAPQTQEAFKIAAARRTVEEAITKRSELKEDFDNALGDRLDKYGIIVLD 158
Query: 220 LSSIQLREIVLPAKIKEQIEKVQIARQESERVKYEVERSKQEAQKQAALAKGEADANRIK 279
S + L + +E+ QIA Q ++R Y ++QEAQ + AKG+A+A R+
Sbjct: 159 TSVVDL---TFSPEFARAVEEKQIAEQRAQRAVYVAREAEQEAQAEINRAKGKAEAQRLL 215
Query: 280 AQ 281
A+
Sbjct: 216 AE 217
>gb|AAB53231.1| (U97204) prohibitin-like molecule TC-PRO-1 [Toxocara canis]
Length = 274
Score = 70.5 bits (171), Expect = 3e-11
Identities = 56/261 (21%), Positives = 110/261 (41%), Gaps = 45/261 (17%)
Query: 79 EPTPLQPGIHFFVPIIQDILIVDTRIRNINFSRTEDMGVAGKNQGIFRNDAINVMDSRGL 138
+P + G HF +P +Q +I D R S + S+ L
Sbjct: 48 KPDVVGEGTHFLIPWVQRPIIFDIRSTPRAIS--------------------TITGSKDL 87
Query: 139 -TVSIELTVQYRLNPQTTPQTIATYGLSWEQKIINPVVRDVVRSVVGRYPAEDLPIKRNE 197
VSI L + +R P P G + ++++ + +V+++VV ++ A ++ +R
Sbjct: 88 QNVSITLRILHRPEPSKLPNIYLNIGQDYAERVLPSITNEVLKAVVAQFDAHEMITQRES 147
Query: 198 IAALINSGINKEVSKLPNTPVELSSIQLREIVLPAKIKEQIEKVQIARQESERVKYEVER 257
++ ++ +++ + + L I + + + E +E Q+A+QE+E+ +Y VE
Sbjct: 148 VSHRVSVELSERARQFG---ILLDDIAITHLSFGREFTEAVEMKQVAQQEAEKARYLVET 204
Query: 258 SKQEAQKQAALAKGEADANRIKAQGVADAIVIEAKAKSQANLSISQSLSDKLLRLRQIEV 317
++Q A+G+A A ++ AQ DA D L+ LR+IE
Sbjct: 205 AEQMKIAAITTAEGDAQAAKLLAQAFKDA-------------------GDGLIELRKIEA 245
Query: 318 QGQFNEALKTNNNAQIMLTPG 338
+ E + N ++ PG
Sbjct: 246 AEEIAERMSKTRN--VIYLPG 264
>ref|XP_080392.1| (XM_080392) l(2)03709 [Drosophila melanogaster]
Length = 303
Score = 70.5 bits (171), Expect = 3e-11
Identities = 43/167 (25%), Positives = 88/167 (51%), Gaps = 3/167 (1%)
Query: 140 VSIELTVQYRLNPQTTPQTIATYGLSWEQKIINPVVRDVVRSVVGRYPAEDLPIKRNEIA 199
++I L V R + P G+ +++K++ + +V++SV+ ++ A L +R +++
Sbjct: 103 INISLRVLSRPDSLNLPYLHKQLGVDYDEKVLPSICNEVLKSVIAKFNASQLITQRQQVS 162
Query: 200 ALINSGINKEVSKLPNTPVELSSIQLREIVLPAKIKEQIEKVQIARQESERVKYEVERSK 259
LI + V + + + L + L E+ + IE Q+A+QE++R + VER+K
Sbjct: 163 LLIRKEL---VERARDFNIILDDVSLTELSFGKEYTAAIEAKQVAQQEAQRAVFFVERAK 219
Query: 260 QEAQKQAALAKGEADANRIKAQGVADAIVIEAKAKSQANLSISQSLS 306
QE Q++ A+GEA+A ++ V K +A SI+++++
Sbjct: 220 QEKQQKIVQAEGEAEAAKMLGLAVKQNPAYLKLRKLRAAQSIARTIA 266
>ref|NP_171882.1| (NM_100266) putative prohibitin 2 [Arabidopsis thaliana]
gb|AAD00156.1| (U66592) prohibitin 2 [Arabidopsis thaliana]
gb|AAD09244.1| (U89791) prohibitin-like protein [Arabidopsis thaliana]
gb|AAD10682.1| (AC003027) prohibitin 2 [Arabidopsis thaliana]
gb|AAK44132.1|AF370317_1 (AF370317) putative prohibitin 2 protein [Arabidopsis thaliana]
gb|AAL34276.1| (AY063102) putative prohibitin 2 protein [Arabidopsis thaliana]
Length = 286
Score = 69.3 bits (168), Expect = 6e-11
Identities = 57/245 (23%), Positives = 106/245 (43%), Gaps = 35/245 (14%)
Query: 86 GIHFFVPIIQDILIVDTRIRNINFSRTEDMGVAGKNQGIFRNDAINVMDSRGLT-VSIEL 144
G HF VP + +I D R R T S L V I L
Sbjct: 62 GTHFMVPWFERPIIYDVRARPYLVESTTG--------------------SHDLQMVKIGL 101
Query: 145 TVQYRLNPQTTPQTIATYGLSWEQKIINPVVRDVVRSVVGRYPAEDLPIKRNEIAALINS 204
V R PQ T G ++ ++++ ++ + +++VV +Y A L +R ++ I
Sbjct: 102 RVLTRPMGDRLPQIYRTLGENYSERVLPSIIHETLKAVVAQYNASQLITQREAVSREIRK 161
Query: 205 GINKEVSKLPNTPVELSSIQLREIVLPAKIKEQIEKVQIARQESERVKYEVERSKQEAQK 264
+ + S N + L + + + + IE Q+A QE+ER K+ VE+++Q+ +
Sbjct: 162 ILTERAS---NFDIALDDVSITTLTFGKEFTAAIEAKQVAAQEAERAKFIVEKAEQDRRS 218
Query: 265 QAALAKGEADANRIKAQGVADAIVIEAKAKSQANLSISQSL-----------SDKLLRLR 313
A+GEA + ++ Q +A+ K +A I+Q++ +D LL L+
Sbjct: 219 AVIRAQGEAKSAQLIGQAIANNQAFITLRKIEAAREIAQTIAQSANKVYLSSNDLLLNLQ 278
Query: 314 QIEVQ 318
++ ++
Sbjct: 279 EMNLE 283
>gb|EAA05785.1| (AAAB01008835) agCP10268 [Anopheles gambiae str. PEST]
Length = 280
Score = 68.9 bits (167), Expect = 8e-11
Identities = 45/202 (22%), Positives = 101/202 (49%), Gaps = 24/202 (11%)
Query: 86 GIHFFVPIIQDILIVDTRIRNINFSRTEDMGVAGKNQGIFRNDAINVMDSRGL-TVSIEL 144
G HFFVP +Q +I D R S+ ++ V + S+ L V+I L
Sbjct: 61 GTHFFVPWVQRPIIFDIR------SQPRNVPV--------------ITGSKDLQNVNITL 100
Query: 145 TVQYRLNPQTTPQTIATYGLSWEQKIINPVVRDVVRSVVGRYPAEDLPIKRNEIAALINS 204
+ +R P P+ G ++++++ + +V+++VV ++ A +L +R ++ ++
Sbjct: 101 RILFRPVPDQLPKIYTILGQDYDERVLPSITTEVLKAVVAQFDAGELITQREMVSQKVSD 160
Query: 205 GINKEVSKLPNTPVELSSIQLREIVLPAKIKEQIEKVQIARQESERVKYEVERSKQEAQK 264
+ + ++ V L I + + + + +E Q+A+QE+E+ ++ VE+++Q Q
Sbjct: 161 DLTERAAQFG---VILDDISITHLTFGKEFTQAVEMKQVAQQEAEKARFMVEKAEQMKQA 217
Query: 265 QAALAKGEADANRIKAQGVADA 286
A+G+A A ++ A+ + ++
Sbjct: 218 AIITAEGDAQAAQMLARSLKES 239
>gb|AAF57632.2| (AE003798) CG15081-PA [Drosophila melanogaster]
gb|AAF57631.2| (AE003798) CG15081-PB [Drosophila melanogaster]
gb|AAM68447.1| (AE003798) CG15081-PC [Drosophila melanogaster]
Length = 243
Score = 68.9 bits (167), Expect = 8e-11
Identities = 38/139 (27%), Positives = 77/139 (55%), Gaps = 3/139 (2%)
Query: 140 VSIELTVQYRLNPQTTPQTIATYGLSWEQKIINPVVRDVVRSVVGRYPAEDLPIKRNEIA 199
++I L V R + P G+ +++K++ + +V++SV+ ++ A L +R +++
Sbjct: 103 INISLRVLSRPDSLNLPYLHKQLGVDYDEKVLPSICNEVLKSVIAKFNASQLITQRQQVS 162
Query: 200 ALINSGINKEVSKLPNTPVELSSIQLREIVLPAKIKEQIEKVQIARQESERVKYEVERSK 259
LI + V + + + L + L E+ + IE Q+A+QE++R + VER+K
Sbjct: 163 LLIRKEL---VERARDFNIILDDVSLTELSFGKEYTAAIEAKQVAQQEAQRAVFFVERAK 219
Query: 260 QEAQKQAALAKGEADANRI 278
QE Q++ A+GEA+A ++
Sbjct: 220 QEKQQKIVQAEGEAEAAKM 238
>ref|NP_490929.1| (NM_058528) Y37E3.9.p [Caenorhabditis elegans]
gb|AAK27865.1| (AC087079) Hypothetical protein Y37E3.9 [Caenorhabditis elegans]
Length = 275
Score = 68.9 bits (167), Expect = 8e-11
Identities = 52/246 (21%), Positives = 105/246 (42%), Gaps = 43/246 (17%)
Query: 86 GIHFFVPIIQDILIVDTRIRNINFSRTEDMGVAGKNQGIFRNDAINVMDSRGL-TVSIEL 144
G HF +P +Q +I D R + S+ L V+I L
Sbjct: 56 GTHFLIPWVQKPIIFDIRSTP--------------------RAVTTITGSKDLQNVNITL 95
Query: 145 TVQYRLNPQTTPQTIATYGLSWEQKIINPVVRDVVRSVVGRYPAEDLPIKRNEIAALINS 204
+ +R +P P GL + ++++ + +V+++VV ++ A ++ +R ++ +
Sbjct: 96 RILHRPSPDRLPNIYLNIGLDYAERVLPSITNEVLKAVVAQFDAHEMITQREVVSQRASV 155
Query: 205 GINKEVSKLPNTPVELSSIQLREIVLPAKIKEQIEKVQIARQESERVKYEVERSKQEAQK 264
+ + ++ + L I + + + E +E Q+A+QE+E+ +Y VE+++Q
Sbjct: 156 ALRERAAQFG---LLLDDIAITHLNFGREFTEAVEMKQVAQQEAEKARYLVEKAEQMKIA 212
Query: 265 QAALAKGEADANRIKAQGVADAIVIEAKAKSQANLSISQSLSDKLLRLRQIEVQGQFNEA 324
A+G+A A ++ A+ A A D L+ LR+IE + E
Sbjct: 213 AVTTAEGDAQAAKLLAKAFASA-------------------GDGLVELRKIEAAEEIAER 253
Query: 325 LKTNNN 330
+ N N
Sbjct: 254 MAKNKN 259
>ref|NP_218553.1| (NC_000919) Lambda CII stability-governing protein (hflK)
[Treponema pallidum]
sp|O83151|HFLK_TREPA HFLK protein
pir||H71364 probable Lambda CII stability-governing protein (hflK) - syphilis
spirochete
gb|AAC65102.1| (AE001196) Lambda CII stability-governing protein (hflK) [Treponema
pallidum]
Length = 328
Score = 68.6 bits (166), Expect = 1e-10
Identities = 59/243 (24%), Positives = 113/243 (46%), Gaps = 11/243 (4%)
Query: 53 VIAFLAKPFEVISSGEIGIKITAGKYEPTPLQPGIHFFVPIIQDILIVD-TRIRNINFS- 110
VI +A P +IS + G+ GKY T L+PG+H+ +P ++ + V T+++ F
Sbjct: 25 VIVGIASPIRIISPTDNGVVTRFGKYHRT-LEPGLHYLIPFVEWVYKVPVTKVQKEEFGF 83
Query: 111 RTEDMGVAGKNQGIFRNDAINVMDSRGLTVSIELTVQYRL-NPQTTPQTIATYGLSWEQK 169
RT ++++ + + V +E VQYR+ +P+ + + ++
Sbjct: 84 RTSKSSEQSHYVNNISHESLMLTGDLNI-VDVEWVVQYRIVDPRAWVFNVES---QERRQ 139
Query: 170 IINPVVRDVVRSVVGRYPAEDLPIKRNEIAALINSGINKEVSKLPNTPVELSSIQLREIV 229
I + + VV S++G D+ + + + K V +SS+QL+ +V
Sbjct: 140 TIRDISKAVVNSLIGDRAILDIMGPERSAIQMRAKDMMNVLLKRIGLGVLVSSVQLQNVV 199
Query: 230 LPAKIKEQIEKVQIARQESERVKYEVERSKQEAQKQAALAKGEADANRIKAQGVADAIVI 289
P ++++ E V IA Q+ R+ + K+ ++ A+G+AD +A G A+ V
Sbjct: 200 PPQEVQQAFEDVNIAIQDMNRL---INEGKESYNREIPKARGDADKLIQEAMGYANERVN 256
Query: 290 EAK 292
AK
Sbjct: 257 RAK 259
>ref|NP_002625.1| (NM_002634) prohibitin [Homo sapiens]
sp|P35232|PHB_HUMAN Prohibitin
pir||I52690 prohibitin - human
gb|AAB21614.1| (S85655) prohibitin [Homo sapiens]
gb|AAH13401.1|AAH13401 (BC013401) prohibitin [Homo sapiens]
Length = 272
Score = 67.8 bits (164), Expect = 2e-10
Identities = 45/202 (22%), Positives = 98/202 (48%), Gaps = 24/202 (11%)
Query: 86 GIHFFVPIIQDILIVDTRIRNINFSRTEDMGVAGKNQGIFRNDAINVMDSRGL-TVSIEL 144
G HF +P +Q +I D R SR ++ V + S+ L V+I L
Sbjct: 53 GTHFLIPWVQKPIIFDCR------SRPRNVPV--------------ITGSKDLQNVNITL 92
Query: 145 TVQYRLNPQTTPQTIATYGLSWEQKIINPVVRDVVRSVVGRYPAEDLPIKRNEIAALINS 204
+ +R P+ + G ++++++ + ++++SVV R+ A +L +R ++ ++
Sbjct: 93 RILFRPVASQLPRIFTSIGEDYDERVLPSITTEILKSVVARFDAGELITQRELVSRQVSD 152
Query: 205 GINKEVSKLPNTPVELSSIQLREIVLPAKIKEQIEKVQIARQESERVKYEVERSKQEAQK 264
+ + + + L + L + + E +E Q+A+QE+ER ++ VE+++Q+ +
Sbjct: 153 DLTERAATFG---LILDDVSLTHLTFGKEFTEAVEAKQVAQQEAERARFVVEKAEQQKKA 209
Query: 265 QAALAKGEADANRIKAQGVADA 286
A+G++ A + A +A A
Sbjct: 210 AIISAEGDSKAAELIANSLATA 231
>ref|NP_032857.1| (NM_008831) prohibitin [Mus musculus]
ref|NP_114039.1| (NM_031851) prohibitin [Rattus norvegicus]
sp|P24142|PHB_MOUSE PROHIBITIN (B-CELL RECEPTOR ASSOCIATED PROTEIN 32) (BAP 32)
pir||A39682 prohibitin - rat
gb|AAA63500.1| (M61219) prohibitin [Rattus norvegicus]
emb|CAA55349.1| (X78682) prohibitin or B-cell receptor associated protein (BAP) 32
[Mus musculus]
dbj|BAB22305.1| (AK002714) data source:MGD, source key:MGI:97572,
evidence:ISS~prohibitin~putative [Mus musculus]
dbj|BAB27067.1| (AK010619) data source:MGD, source key:MGI:97572,
evidence:ISS~prohibitin~putative [Mus musculus]
Length = 272
Score = 67.4 bits (163), Expect = 2e-10
Identities = 45/202 (22%), Positives = 98/202 (48%), Gaps = 24/202 (11%)
Query: 86 GIHFFVPIIQDILIVDTRIRNINFSRTEDMGVAGKNQGIFRNDAINVMDSRGL-TVSIEL 144
G HF +P +Q +I D R SR ++ V + S+ L V+I L
Sbjct: 53 GTHFLIPWVQKPIIFDCR------SRPRNVPV--------------ITGSKDLQNVNITL 92
Query: 145 TVQYRLNPQTTPQTIATYGLSWEQKIINPVVRDVVRSVVGRYPAEDLPIKRNEIAALINS 204
+ +R P+ + G ++++++ + ++++SVV R+ A +L +R ++ ++
Sbjct: 93 RILFRPVASQLPRIYTSIGEDYDERVLPSITTEILKSVVARFDAGELITQRELVSRQVSD 152
Query: 205 GINKEVSKLPNTPVELSSIQLREIVLPAKIKEQIEKVQIARQESERVKYEVERSKQEAQK 264
+ + + + L + L + + E +E Q+A+QE+ER ++ VE+++Q+ +
Sbjct: 153 DLTERAATFG---LILDDVSLTHLTFGKEFTEAVEAKQVAQQEAERARFVVEKAEQQKKA 209
Query: 265 QAALAKGEADANRIKAQGVADA 286
A+G++ A + A +A A
Sbjct: 210 AIISAEGDSKAAELIANSLATA 231
>ref|NP_614130.1| (NC_003551) Membrane protease subunit, stomatin/prohibitin homolog
[Methanopyrus kandleri AV19]
gb|AAM02060.1| (AE010374) Membrane protease subunit, stomatin/prohibitin homolog
[Methanopyrus kandleri AV19]
Length = 245
Score = 66.2 bits (160), Expect = 5e-10
Identities = 51/223 (22%), Positives = 106/223 (46%), Gaps = 30/223 (13%)
Query: 44 VLIVIVLLGVIAFL--AKPFEVISSGEIGIKITAGKYEPTPLQPGIHFFVPIIQDILIVD 101
++I +V+ GV+A L A +++ E G+ + G+Y T +PG++F VP I ++ VD
Sbjct: 1 MIIPLVVGGVLALLVLAASVRIVNQYERGVLLRLGRYIGTR-EPGLNFIVPFIDKMIKVD 59
Query: 102 TRIRNINFSRTEDMGVAGKNQGIFRNDAINVMDSRGLTVSIELTVQYR-LNPQTTPQTIA 160
R+ N E V+ + + ++ + YR ++P + +
Sbjct: 60 LRVVTQNIPAQE------------------VITKDNVPIKVDAVIYYRVVDPVSAVLNVE 101
Query: 161 TYGLSWEQKIINPVVRDVVRSVVGRYPAEDLPIKRNEIAALINSGINKEVSKLPNTPVEL 220
Y E+ + N + + +RSV+G +D+ KR E++ I I++ K + +
Sbjct: 102 DY----EEAVFN-LAQTTLRSVLGEVDLDDILAKREELSERIREIIDE---KTEGWGIHV 153
Query: 221 SSIQLREIVLPAKIKEQIEKVQIARQESERVKYEVERSKQEAQ 263
+ +++R+++LP +++ I + A ++ + E KQ AQ
Sbjct: 154 TGVEIRDVILPEEMRRAIARQAEAERDRRARVIQAEAEKQAAQ 196
>gb|AAK07610.1|AF319771_2 (AF319771) prohibitin 1-like protein [Brassica napus]
Length = 290
Score = 66.2 bits (160), Expect = 5e-10
Identities = 51/222 (22%), Positives = 97/222 (42%), Gaps = 24/222 (10%)
Query: 86 GIHFFVPIIQDILIVDTRIRNINFSRTEDMGVAGKNQGIFRNDAINVMDSRGLT-VSIEL 144
G H VP + +I D R R T SR L V I L
Sbjct: 64 GTHLMVPWFERPVIYDVRARPYLVESTSG--------------------SRDLQMVKIGL 103
Query: 145 TVQYRLNPQTTPQTIATYGLSWEQKIINPVVRDVVRSVVGRYPAEDLPIKRNEIAALINS 204
V R P+ T G ++ ++++ ++ + +++VV +Y A L +R ++ I
Sbjct: 104 RVLTRPMADQLPEIYRTLGENYSERVLPSIIHETLKAVVAQYNASQLITQREAVSREIRK 163
Query: 205 GINKEVSKLPNTPVELSSIQLREIVLPAKIKEQIEKVQIARQESERVKYEVERSKQEAQK 264
+ + + N + L + + + + IE Q+A QE+ER K+ VE+++Q+ +
Sbjct: 164 ILTQRAT---NFNIALDDVSITTLTFGKEFTAAIEAKQVAAQEAERAKFIVEKAEQDKRS 220
Query: 265 QAALAKGEADANRIKAQGVADAIVIEAKAKSQANLSISQSLS 306
A+GEA + ++ Q +A+ K +A I+Q+++
Sbjct: 221 AVIRAQGEAKSAQLIGQAIANNQAFITLRKIEAAREIAQTIA 262
>ref|NP_194580.1| (NM_118993) prohibitin-like protein [Arabidopsis thaliana]
pir||T04622 prohibitin-like protein F20O9.200 - Arabidopsis thaliana
emb|CAA16891.1| (AL021749) prohibitin-like protein [Arabidopsis thaliana]
gb|AAD00155.1| (U66591) prohibitin 1 [Arabidopsis thaliana]
gb|AAD00158.1| (U66594) prohibitin 1 [Arabidopsis thaliana]
emb|CAB81439.1| (AL161573) prohibitin-like protein [Arabidopsis thaliana]
gb|AAM13227.1| (AY093228) prohibitin-like protein [Arabidopsis thaliana]
Length = 288
Score = 65.5 bits (158), Expect = 9e-10
Identities = 39/168 (23%), Positives = 84/168 (49%), Gaps = 3/168 (1%)
Query: 140 VSIELTVQYRLNPQTTPQTIATYGLSWEQKIINPVVRDVVRSVVGRYPAEDLPIKRNEIA 199
V I L V R P+ + G ++ ++++ ++ + +++VV +Y A L +R ++
Sbjct: 97 VKIGLRVLTRPMADQLPEIYRSLGENYSERVLPSIINETLKAVVAQYNASQLITQREAVS 156
Query: 200 ALINSGINKEVSKLPNTPVELSSIQLREIVLPAKIKEQIEKVQIARQESERVKYEVERSK 259
I + + + N V L + + + + IE Q+A QE+ER K+ VE+++
Sbjct: 157 REIRKILTERAA---NFNVALDDVSITNLTFGKEFTAAIEAKQVAAQEAERAKFIVEKAE 213
Query: 260 QEAQKQAALAKGEADANRIKAQGVADAIVIEAKAKSQANLSISQSLSD 307
Q+ + A+GEA + ++ Q +A+ K +A I+Q++++
Sbjct: 214 QDKRSAVIRAQGEAKSAQLIGQAIANNQAFITLRKIEAAREIAQTIAN 261
>ref|NP_588144.1| (NC_003421) putative prohibitin [Schizosaccharomyces pombe]
pir||T40947 probable prohibitin antiproliferative protein - fission yeast
(Schizosaccharomyces pombe)
emb|CAA22869.1| (AL035259) putative prohibitin [Schizosaccharomyces pombe]
Length = 279
Score = 65.1 bits (157), Expect = 1e-09
Identities = 44/201 (21%), Positives = 91/201 (44%), Gaps = 28/201 (13%)
Query: 86 GIHFFVPIIQDILIVDTRIRNINFSR---TEDMGVAGKNQGIFRNDAINVMDSRGLTVSI 142
G HF +P I+ + D R + N S T+D+ + V+I
Sbjct: 62 GTHFLIPWIETAIDYDVRAKPRNISSLTGTKDLQM----------------------VNI 99
Query: 143 ELTVQYRLNPQTTPQTIATYGLSWEQKIINPVVRDVVRSVVGRYPAEDLPIKRNEIAALI 202
V R + P+ T G ++++++ +V +V++SVV ++ A L +R ++ L+
Sbjct: 100 NCRVLSRPDVHALPKIYRTLGGDYDERVLPSIVNEVLKSVVAQFNASQLITQRERVSRLV 159
Query: 203 NSGINKEVSKLPNTPVELSSIQLREIVLPAKIKEQIEKVQIARQESERVKYEVERSKQEA 262
+ K ++ + L + L + + +E QIA+Q+++R + V+R++ E
Sbjct: 160 RENLMKRAARFN---ILLDDVSLTHVQFSPEFTAAVEAKQIAQQDAQRATFYVDRARMEK 216
Query: 263 QKQAALAKGEADANRIKAQGV 283
Q A+GE A ++ + +
Sbjct: 217 QGFIVRAQGEGRAAQLIGEAI 237
>gb|AAM65593.1| (AY088047) prohibitin-like protein [Arabidopsis thaliana]
Length = 288
Score = 65.1 bits (157), Expect = 1e-09
Identities = 39/168 (23%), Positives = 84/168 (49%), Gaps = 3/168 (1%)
Query: 140 VSIELTVQYRLNPQTTPQTIATYGLSWEQKIINPVVRDVVRSVVGRYPAEDLPIKRNEIA 199
V I L V R P+ + G ++ ++++ ++ + +++VV +Y A L +R ++
Sbjct: 97 VKIGLRVLTRPMADQLPEIYRSLGENYSERVLPSIINETLKAVVAQYNASQLITQREAVS 156
Query: 200 ALINSGINKEVSKLPNTPVELSSIQLREIVLPAKIKEQIEKVQIARQESERVKYEVERSK 259
I + + + N V L + + + + IE Q+A QE+ER K+ VE+++
Sbjct: 157 REIRKILTERAA---NFNVALDDVSITXLTFGKEFTAAIEAKQVAAQEAERAKFIVEKAE 213
Query: 260 QEAQKQAALAKGEADANRIKAQGVADAIVIEAKAKSQANLSISQSLSD 307
Q+ + A+GEA + ++ Q +A+ K +A I+Q++++
Sbjct: 214 QDKRSAVIRAQGEAKSAQLIGQAIANNQAFITLRKIEAAREIAQTIAN 261
>ref|NP_386230.1| (NC_003047) PUTATIVE MEMBRANE BOUND PROTEASE PROTEIN [Sinorhizobium
meliloti]
emb|CAC46703.1| (AL591789) PUTATIVE MEMBRANE BOUND PROTEASE PROTEIN [Sinorhizobium
meliloti]
Length = 362
Score = 65.1 bits (157), Expect = 1e-09
Identities = 65/307 (21%), Positives = 129/307 (41%), Gaps = 38/307 (12%)
Query: 2 PIDLNEHLKKKNSQRETPTPNTPNNGGRFIPPSNSFNSKKLSVLIVIVLLGVIAFLAKPF 61
P DL E +++ Q + P N G + V++ +++LG + L
Sbjct: 38 PPDLEEIIRRGQDQLKNVVPGGFNGG--------------IFVIVGLLILGFV--LLNSI 81
Query: 62 EVISSGEIGIKITAGKYEPTPLQPGIHFFVPIIQDILIVDTRIRNINFSRTEDMGVAGK- 120
+ E G+++ GK + PG+H+ ++ + IV + N G G+
Sbjct: 82 YTVQPDERGVEMRFGKPKEEISMPGLHYHFWPLETVEIVKVTEQQQNIG-----GRTGQS 136
Query: 121 NQGIFRNDAINVMDSRGLTVSIELTVQYRLNPQTTPQTIATYGLSWEQKIINPVVRDVVR 180
N G+ + N+++ VQ+ + T + + + V +R
Sbjct: 137 NAGLMLSGDQNIVN-----------VQFSVLFSVTDPKAYLFNVENPADTLQQVAESAMR 185
Query: 181 SVVGRYPAEDL-PIKRNEIAALINSGINKEVSKLPNTPVELSSIQLREIVLPAKIKEQIE 239
VVGR PA+D+ R IAA + + I + + ++++ + + P ++ + +
Sbjct: 186 EVVGRRPAQDIFRDNRQAIAADVKNTIQATMDSY-GAGISVNTVAIEDAAPPREVADAFD 244
Query: 240 KVQIARQESERVKYEVERSKQEAQKQAALAKGEADANRIKAQGVADAIVIEAKAKSQANL 299
+VQ A Q+ +R VE + Q A + A+G+ R +A D +V EA+ ++Q +
Sbjct: 245 EVQRAEQDEDRF---VEEANQYANQVLGRARGQGAQIREEAAAYKDRVVKEAQGEAQRFI 301
Query: 300 SISQSLS 306
S+ S
Sbjct: 302 SVYDEYS 308
>ref|NP_347688.1| (NC_003030) Membrane protease subunit, stomatin/prohibitin homolog
[Clostridium acetobutylicum]
gb|AAK79028.1|AE007621_2 (AE007621) Membrane protease subunit, stomatin/prohibitin homolog
[Clostridium acetobutylicum]
Length = 322
Score = 65.1 bits (157), Expect = 1e-09
Identities = 58/292 (19%), Positives = 147/292 (49%), Gaps = 37/292 (12%)
Query: 44 VLIVIVLLGVIAFLAKPFEVISSGEIGIKITAGKYEPTPLQPGIHFFVPIIQDILIVDTR 103
+++++VL+ ++ + +V+++G + + G++ T LQPG + +P
Sbjct: 2 IVLIVVLVLILLLIFTSLKVVTTGYVYVVERLGQFHRT-LQPGWNIVIPFA--------- 51
Query: 104 IRNINFSRTEDMGVAGKNQGIFRNDAINVMDSRGLTVSIELTVQYR-LNPQTTPQTIATY 162
+F+R + Q I +V+ + +SI+ + Y+ +N + I +Y
Sbjct: 52 ----DFTRAK----VSTKQQILDIQPQSVITKDNVKISIDNVIFYKVMNARDAIYNIESY 103
Query: 163 GLSWEQKIINPVVRDVVRSVVGRYPAEDLPIKRNEIAALINSGINKEVSKLPNT-PVELS 221
+ II + ++ R++VG +++ R+ +IN + K V ++ + +++
Sbjct: 104 ----KSGIIYSTITNM-RNIVGNMTLDEVLSGRD----IINQELLKVVDEITDAYGIKIL 154
Query: 222 SIQLREIVLPAKIKEQIEKVQIARQESERVKYEVERSKQ------EAQKQAALAKGEAD- 274
S++++ I+ PA+I++ +EK A ++ + E KQ E +KQ + + EA+
Sbjct: 155 SVEIKNIIPPAEIQQAMEKQMRAERDKRATILQAEGQKQAQIAKAEGEKQGKILQAEAEK 214
Query: 275 -ANRIKAQGVADAIVIEAKAKSQANLSISQSLSDKLLRLRQIEVQGQFNEAL 325
AN +A+G+ ++ ++EA+ K++A +++++ + + ++ + ++ NE +
Sbjct: 215 QANIKRAEGLKESQLLEAEGKAKAIEAVAEAEAKAINKVNRSIIESGTNETV 266
>gb|AAF53765.1| (AE003661) l(2)37Cc gene product [Drosophila melanogaster]
gb|AAM52623.1| (AY122111) GH12454p [Drosophila melanogaster]
Length = 276
Score = 64.3 bits (155), Expect = 2e-09
Identities = 45/202 (22%), Positives = 96/202 (47%), Gaps = 24/202 (11%)
Query: 86 GIHFFVPIIQDILIVDTRIRNINFSRTEDMGVAGKNQGIFRNDAINVMDSRGL-TVSIEL 144
G HFF+P +Q +I D R S+ ++ V + S+ L V+I L
Sbjct: 53 GTHFFIPWVQRPIIFDIR------SQPRNVPV--------------ITGSKDLQNVNITL 92
Query: 145 TVQYRLNPQTTPQTIATYGLSWEQKIINPVVRDVVRSVVGRYPAEDLPIKRNEIAALINS 204
+ YR P P+ G ++++++ + +V+++VV ++ A +L +R ++ ++
Sbjct: 93 RILYRPIPDQLPKIYTILGQDYDERVLPSIAPEVLKAVVAQFDAGELITQREMVSQRVSQ 152
Query: 205 GINKEVSKLPNTPVELSSIQLREIVLPAKIKEQIEKVQIARQESERVKYEVERSKQEAQK 264
+ + L I L + + +E Q+A+QE+E+ ++ VE+++Q+
Sbjct: 153 ELTVRAKQFGFI---LDDISLTHLTFGREFTLAVEMKQVAQQEAEKARFVVEKAEQQKLA 209
Query: 265 QAALAKGEADANRIKAQGVADA 286
A+G+A+A + A+ +A
Sbjct: 210 SIISAEGDAEAAGLLAKSFGEA 231
>ref|NP_626066.1| (NC_003888) putative secreted protein [Streptomyces coelicolor
A3(2)]
pir||T36857 conserved hypothetical protein SCI5.04c - Streptomyces coelicolor
emb|CAB45288.1| (AL079332) putative secreted protein [Streptomyces coelicolor
A3(2)]
Length = 319
Score = 64.3 bits (155), Expect = 2e-09
Identities = 63/255 (24%), Positives = 112/255 (43%), Gaps = 37/255 (14%)
Query: 44 VLIVIVLLGVIAFLA--KPFEVISSGEIGIKITAGKYEPTPLQPGIHFFVPIIQDILI-V 100
V+IV+++L V+ F+A K +VI I G+Y T L G++ VP I I +
Sbjct: 4 VIIVLIILVVLVFIALIKTIQVIPQASAAIVERFGRYTRT-LNAGLNIVVPFIDTIRNRI 62
Query: 101 DTRIRNINFSRTEDMGVAGKNQGIFRNDAINVMDSRGLTVSIELTVQYRLNPQTTPQTIA 160
D R + + F V+ L V+I+ + Y Q T A
Sbjct: 63 DLREQVVPFPPQP------------------VITQDNLVVNIDTVIYY----QVTDARAA 100
Query: 161 TYGLSWEQKIINPVVRDVVRSVVGRYPAEDLPIKRNEIAALINSGINKEVSKLPNTPVEL 220
TY ++ + I + +R+++G E R EI A + +++ K + +
Sbjct: 101 TYEVASYIQAIEQLTVTTLRNIIGGMDLERTLTSREEINAALRGVLDEATGKWG---IRV 157
Query: 221 SSIQLREIVLPAKIKEQIEKVQIARQESERV--------KYEVERSKQEAQKQAALAKGE 272
+ ++L+ I P I++ +EK A ++ + E+ R++ E Q Q A+GE
Sbjct: 158 NRVELKAIEPPTSIQDSMEKQMRADRDKRAAILQAEGVRQSEILRAEGEKQSQILRAEGE 217
Query: 273 ADANRIKAQGVADAI 287
A A ++A+G A A+
Sbjct: 218 AKAAALRAEGEAQAV 232
>ref|NP_179643.1| (NM_127613) putative prohibitin [Arabidopsis thaliana]
gb|AAD25653.1| (AC007109) putative prohibitin [Arabidopsis thaliana]
gb|AAL62370.1| (AY072378) putative prohibitin [Arabidopsis thaliana]
gb|AAM47939.1| (AY114620) putative prohibitin [Arabidopsis thaliana]
gb|AAM65902.1| (AY088363) putative prohibitin [Arabidopsis thaliana]
Length = 286
Score = 64.3 bits (155), Expect = 2e-09
Identities = 39/167 (23%), Positives = 82/167 (48%), Gaps = 3/167 (1%)
Query: 140 VSIELTVQYRLNPQTTPQTIATYGLSWEQKIINPVVRDVVRSVVGRYPAEDLPIKRNEIA 199
V I L V R P+ + G ++ ++++ ++ + +++VV +Y A L +R ++
Sbjct: 95 VKIGLRVLTRPMADQLPEVYRSLGENYRERVLPSIIHETLKAVVAQYNASQLITQRESVS 154
Query: 200 ALINSGINKEVSKLPNTPVELSSIQLREIVLPAKIKEQIEKVQIARQESERVKYEVERSK 259
I + + N + L + + + + IE Q+A QE+ER K+ VE+++
Sbjct: 155 REIRKILTLRAA---NFHIALDDVSITGLTFGKEFTAAIEGKQVAAQEAERAKFIVEKAE 211
Query: 260 QEAQKQAALAKGEADANRIKAQGVADAIVIEAKAKSQANLSISQSLS 306
Q+ + A+GEA + ++ Q +A+ K +A I+Q++S
Sbjct: 212 QDKRSAVIRAEGEAKSAQLIGQAIANNQAFLTLRKIEAAREIAQTIS 258
>ref|NP_532721.1| (NC_003304) HFLK protein [Agrobacterium tumefaciens str. C58 (U.
Washington)]
gb|AAL43037.1| (AE009155) HFLK protein [Agrobacterium tumefaciens str. C58 (U.
Washington)]
Length = 372
Score = 63.9 bits (154), Expect = 3e-09
Identities = 63/301 (20%), Positives = 130/301 (42%), Gaps = 35/301 (11%)
Query: 2 PIDLNEHLKKKNSQRETPTPNTPNNGGRFIPPSNSFNSKKLSVLIVIVLLGVIAFLAKPF 61
P DL E +++ + + P N G + VL+V+V LG+ +
Sbjct: 46 PPDLEEIIRRSQDRFKNVLPGGFNGG-----------VVAIVVLVVLVFLGI-----QSI 89
Query: 62 EVISSGEIGIKITAGKYEPTPLQPGIHFFVPIIQDILIVDTRIRNINFSRTEDMGVAGKN 121
+ E G+++ G+ + PG+HF + I+ + IV + N + +
Sbjct: 90 YTVQPDERGVELRFGRPKDEISMPGLHFHLWPIETVEIVKVTEQQQNIG---SRASSSSS 146
Query: 122 QGIFRNDAINVMDSRGLTVSIELTVQYRLNPQTTPQTIATYGLSWEQKIINPVVRDVVRS 181
G+ N+ V+++ +V Y ++ + + + + + V +R
Sbjct: 147 SGVMLTGDQNI-------VNVQFSVLYTVSDPKS----YLFNVDAPAETLQQVSESAMRE 195
Query: 182 VVGRYPAEDL-PIKRNEIAALINSGINKEVSKLPNTPVELSSIQLREIVLPAKIKEQIEK 240
VVGR PA+D+ R IAA + S I + + ++++ + + P ++ + ++
Sbjct: 196 VVGRRPAQDIFRDNRQAIAADVRSIIQSTMDGY-GAGISINAVAIEDAAPPREVADAFDE 254
Query: 241 VQIARQESERVKYEVERSKQEAQKQAALAKGEADANRIKAQGVADAIVIEAKAKSQANLS 300
VQ A Q+ +R V+ + Q A ++ A+G+A +A +V EA+ ++Q +S
Sbjct: 255 VQRAEQDEDRF---VQEANQYANQKLGAARGQAAQIVEEANAYKSRVVNEAEGEAQRFIS 311
Query: 301 I 301
I
Sbjct: 312 I 312
>ref|NP_355013.1| (NC_003062) AGR_C_3705p [Agrobacterium tumefaciens] [Agrobacterium
tumefaciens str. C58 (Cereon)]
gb|AAK87798.1| (AE008121) AGR_C_3705p [Agrobacterium tumefaciens str. C58
(Cereon)]
Length = 373
Score = 63.9 bits (154), Expect = 3e-09
Identities = 63/301 (20%), Positives = 130/301 (42%), Gaps = 35/301 (11%)
Query: 2 PIDLNEHLKKKNSQRETPTPNTPNNGGRFIPPSNSFNSKKLSVLIVIVLLGVIAFLAKPF 61
P DL E +++ + + P N G + VL+V+V LG+ +
Sbjct: 47 PPDLEEIIRRSQDRFKNVLPGGFNGG-----------VVAIVVLVVLVFLGI-----QSI 90
Query: 62 EVISSGEIGIKITAGKYEPTPLQPGIHFFVPIIQDILIVDTRIRNINFSRTEDMGVAGKN 121
+ E G+++ G+ + PG+HF + I+ + IV + N + +
Sbjct: 91 YTVQPDERGVELRFGRPKDEISMPGLHFHLWPIETVEIVKVTEQQQNIG---SRASSSSS 147
Query: 122 QGIFRNDAINVMDSRGLTVSIELTVQYRLNPQTTPQTIATYGLSWEQKIINPVVRDVVRS 181
G+ N+ V+++ +V Y ++ + + + + + V +R
Sbjct: 148 SGVMLTGDQNI-------VNVQFSVLYTVSDPKS----YLFNVDAPAETLQQVSESAMRE 196
Query: 182 VVGRYPAEDL-PIKRNEIAALINSGINKEVSKLPNTPVELSSIQLREIVLPAKIKEQIEK 240
VVGR PA+D+ R IAA + S I + + ++++ + + P ++ + ++
Sbjct: 197 VVGRRPAQDIFRDNRQAIAADVRSIIQSTMDGY-GAGISINAVAIEDAAPPREVADAFDE 255
Query: 241 VQIARQESERVKYEVERSKQEAQKQAALAKGEADANRIKAQGVADAIVIEAKAKSQANLS 300
VQ A Q+ +R V+ + Q A ++ A+G+A +A +V EA+ ++Q +S
Sbjct: 256 VQRAEQDEDRF---VQEANQYANQKLGAARGQAAQIVEEANAYKSRVVNEAEGEAQRFIS 312
Query: 301 I 301
I
Sbjct: 313 I 313
>ref|NP_110835.1| (NC_002689) Membrane protease subunit (stomatin homolog)
[Thermoplasma volcanium]
dbj|BAB59460.1| (AP000992) stomatin-like protein [Thermoplasma volcanium]
Length = 274
Score = 63.5 bits (153), Expect = 4e-09
Identities = 61/292 (20%), Positives = 133/292 (44%), Gaps = 32/292 (10%)
Query: 42 LSVLIVIVLLGVIAFLAKPFEVISSGEIGIKITAGKYEPTPLQPGIHFFVPIIQDILIVD 101
L +L++I+++ + L V+ E I +T G+Y PGI F PI+ + V
Sbjct: 4 LDILLIIIIIIALIILLSGIHVLKEWERAIVLTLGRYGGIR-GPGIIFITPIVSRGIYVS 62
Query: 102 TRIRNINFSRTEDMGVAGKNQGIFRNDAINVMDSRGLTVSIELTVQYR-LNPQTTPQTIA 160
TRI+ + F K + F D + V+++ + Y+ ++PQ I
Sbjct: 63 TRIQPVQF----------KTEATFTKDNV--------PVNVDAIMYYQVIDPQKAVLNIE 104
Query: 161 TYGLSWEQKIINPVVRDVVRSVVGRYPAEDLPIKRNEIAALINSGINKEVSKLPNTPVEL 220
Y + N + +R V+G+ ++L +R ++ I++ K V++
Sbjct: 105 NYSVG-----TNYAAQTTLREVIGKSMFDELLSEREKVGETAREIIDQ---KTEAWGVKV 156
Query: 221 SSIQLREIVLPAKIKEQIEKVQIARQESERVKYEVERSKQEAQKQAALAKGEADANRIKA 280
+S+++R++++P++++E + + Q + + R + + +++ EA ++ A + N +
Sbjct: 157 ASVEIRDVIVPSQLQEAMSR-QASAERERRSRVTLAQAEVEAAQKMVEASKQYVDNPVGL 215
Query: 281 QGVADAIVIEAKAKSQANLSISQSLSDKLLRLRQIEVQGQFNEALKTNNNAQ 332
Q I+ E + ++++ + SD + V G NEALK + +
Sbjct: 216 QLRWMQIIYEIGLEGKSSMIMVP--SDVPVAGSAFSVMG-MNEALKARGHVE 264
>ref|XP_137762.1| (XM_137762) similar to PROHIBITIN (B-CELL RECEPTOR ASSOCIATED
PROTEIN 32) (BAP 32) [Mus musculus]
Length = 271
Score = 63.2 bits (152), Expect = 5e-09
Identities = 57/258 (22%), Positives = 113/258 (43%), Gaps = 44/258 (17%)
Query: 86 GIHFFVPIIQDILIVDTRIRNINFSRTEDMGVAGKNQGIFRNDAINVMDSRGL-TVSIEL 144
G HF +P +Q +I D R S+ ++ V + S+ L V+I L
Sbjct: 53 GTHFLIPWVQKPVIFDCR------SQPRNIPV--------------ITGSKDLQNVNITL 92
Query: 145 TVQYRLNPQTTPQTIATYGLSWEQKIINPVVRDVVRSVVGRYPAEDLPIKRNEIAALINS 204
+ +R P G ++++++ + ++++SVV R+ A +L +R ++ ++
Sbjct: 93 RILFRPVASQLPHIYTNIGQDYDERVLPSITSEILKSVVARFDAGELITQRELVSRQVSD 152
Query: 205 GINKEVSKLPNTPVELSSIQLREIVLPAKIKEQIEKVQIARQESERVKYEVERSKQEAQK 264
+ + + + L + L + + E +E Q+A+QE+E ++ VE+++Q QK
Sbjct: 153 DLTERAATFG---LILDDVSLTHLTFGKEFTEAVEAKQVAQQEAETARFVVEKAEQ--QK 207
Query: 265 QAALAKGEADANRIKAQGVADAIVIEAKAKSQANLSISQSLSDKLLRLRQIEVQGQFNEA 324
AA+ E DA A+ +A+++ + D L+ LR++E
Sbjct: 208 VAAIISAEGDAK--AAELIANSLA---------------TAGDGLIELRKLEAAEDIAYQ 250
Query: 325 LKTNNNAQIMLTPGGAVP 342
L + N L G VP
Sbjct: 251 LSRSQNV-TYLPVGQTVP 267
>ref|NP_539527.1| (NC_003317) HFLK PROTEIN [Brucella melitensis]
gb|AAL51791.1| (AE009503) HFLK PROTEIN [Brucella melitensis]
Length = 384
Score = 63.2 bits (152), Expect = 5e-09
Identities = 65/304 (21%), Positives = 135/304 (44%), Gaps = 36/304 (11%)
Query: 2 PIDLNEHLKKKNSQRETPTPNTPNNGGRFIPPSNSFNSKKLSVLIVIVLLGVIAFLAKPF 61
P DL + L+K + + P GGR +++ + LI +LG +L +
Sbjct: 43 PPDLEDILRKGQDRLKQVFPG---GGGR------KGSNRPIYFLIGAAVLGF--WLFQSV 91
Query: 62 EVISSGEIGIKITAGKYEPTPLQPGIHFF---VPIIQDILIVDTRIRNINFSRTEDMGVA 118
+ E+ +++ GK + +PG+HF + IV+ +I NI G
Sbjct: 92 YTVQPDELAVELRFGKPKEEVSEPGLHFHWWPFETYEKAQIVEKQI-NIG-----GQGTR 145
Query: 119 GKNQGIFRNDAINVMDSRGLTVSIELTVQYRLNPQTTPQTIATYGLSWEQKIINPVVRDV 178
QG+ N+ V+++ +V YR++ + + ++ V
Sbjct: 146 NATQGLMLTGDQNI-------VNVQFSVLYRVSDPRA----YLFNVDSPDAMVQQVSESA 194
Query: 179 VRSVVGRYPAEDL-PIKRNEIAALINSGINKEVSKLPNTPVELSSIQLREIVLPAKIKEQ 237
+R +VGR PA+D+ R+ IA + + + + ++++++ + + P ++ +
Sbjct: 195 IREIVGRRPAQDVFRDNRSAIAQSVRDIVQQTLDNY-KAGIQINAVSIEDAAPPREVADA 253
Query: 238 IEKVQIARQESERVKYEVERSKQEAQKQAALAKGEADANRIKAQGVADAIVIEAKAKSQA 297
++VQ A Q+ +R VE S Q + ++ A+GEA R +A + +V +A+ ++Q
Sbjct: 254 FDEVQRAEQDEDRF---VEESNQYSNQKLGQARGEAAQLREEAAAYKNRVVQDAEGEAQR 310
Query: 298 NLSI 301
S+
Sbjct: 311 FSSV 314
>ref|NP_011747.1| (NC_001139) Possible role in aging; Phb2p [Saccharomyces
cerevisiae]
sp|P50085|YG4W_YEAST Hypothetical 34.9 kDa protein in SMI1-PHO81 intergenic region
pir||S57696 prohibitin PHB2 - yeast (Saccharomyces cerevisiae)
emb|CAA61181.1| (X87941) ORF 315 [Saccharomyces cerevisiae]
emb|CAA97259.1| (Z73016) ORF YGR231c [Saccharomyces cerevisiae]
Length = 315
Score = 63.2 bits (152), Expect = 5e-09
Identities = 44/201 (21%), Positives = 93/201 (45%), Gaps = 28/201 (13%)
Query: 86 GIHFFVPIIQDILIVDTRI--RNI-NFSRTEDMGVAGKNQGIFRNDAINVMDSRGLTVSI 142
G HF P + +I D R RN+ + + T+D+ + V+I
Sbjct: 84 GTHFIFPWLDTPIIYDVRAKPRNVASLTGTKDLQM----------------------VNI 121
Query: 143 ELTVQYRLNPQTTPQTIATYGLSWEQKIINPVVRDVVRSVVGRYPAEDLPIKRNEIAALI 202
V R + P T G ++++++ +V +V+++VV ++ A L +R +++ LI
Sbjct: 122 TCRVLSRPDVVQLPTIYRTLGQDYDERVLPSIVNEVLKAVVAQFNASQLITQREKVSRLI 181
Query: 203 NSGINKEVSKLPNTPVELSSIQLREIVLPAKIKEQIEKVQIARQESERVKYEVERSKQEA 262
+ + SK + L + + + + +E QIA+Q+++R + V++++QE
Sbjct: 182 RENLVRRASKFN---ILLDDVSITYMTFSPEFTNAVEAKQIAQQDAQRAAFVVDKARQEK 238
Query: 263 QKQAALAKGEADANRIKAQGV 283
Q A+GEA + + + +
Sbjct: 239 QGMVVRAQGEAKSAELIGEAI 259
>ref|NP_142449.1| (NC_000961) membrane protein [Pyrococcus horikoshii]
pir||A71159 probable membrane protein - Pyrococcus horikoshii
dbj|BAA29558.1| (AP000002) 298aa long hypothetical membrane protein [Pyrococcus
horikoshii]
Length = 298
Score = 63.2 bits (152), Expect = 5e-09
Identities = 64/259 (24%), Positives = 119/259 (45%), Gaps = 38/259 (14%)
Query: 44 VLIVIVLLGVIAFLAKPFEVISSGEIGIKITAGKYEPTPLQPGIHFFVPIIQDILIVDTR 103
+ ++I+ L ++ L +VI + G+ GK+ L PGIHF +P ++ + IVD R
Sbjct: 11 IALIILGLFLLIMLLLSVKVIRPYQKGLVERLGKFNRL-LDPGIHFIIPFMERVKIVDLR 69
Query: 104 IRNINFSRTEDMGVAGKNQGIFRNDAINVMDSRGLTVSIELTVQYRLNPQTTPQTIATYG 163
I+ E V+ + V+++ V Y Q A Y
Sbjct: 70 EHVIDVPPQE------------------VICKDNVVVTVDAVVYY----QVIDPVKAVYN 107
Query: 164 LSWEQKIINPVVRDVVRSVVGRYPAEDLPIKRNEIAALINSGINKEVSKLPNT-PVELSS 222
+S I + + +R+++G ++ R+ +IN+ + +E+ K+ + V+++
Sbjct: 108 VSDFLMAIVKLAQTNLRAIIGEMELDETLSGRD----IINARLREELDKITDRWGVKITR 163
Query: 223 IQLREIVLPAKIKEQIEKVQIARQESERV------KYEVERSKQEAQKQAALAKGEADAN 276
++++ I P I+E + K A +E + K E + E QKQAA+ K E +
Sbjct: 164 VEIQRIDPPKDIQEAMAKQMTAEREKRAMILIAEGKKEAAIREAEGQKQAAILKAEGEKQ 223
Query: 277 R--IKAQGVADAI--VIEA 291
R + A+G A+AI V+EA
Sbjct: 224 RQILIAEGQAEAIRKVLEA 242
>ref|NP_394756.1| (NC_002578) membrane protein 7, erythrocyte (human) related protein
[Thermoplasma acidophilum]
emb|CAC12423.1| (AL445067) membrane protein 7, erythrocyte (human) related protein
[Thermoplasma acidophilum]
Length = 274
Score = 62.8 bits (151), Expect = 6e-09
Identities = 63/298 (21%), Positives = 132/298 (44%), Gaps = 41/298 (13%)
Query: 42 LSVLIVIVLLGVIAFLAKPFEVISSGEIGIKITAGKYEPTPLQPGIHFFVPIIQDILIVD 101
L +L++I+++ + L V+ E I +T G+Y PGI F PI+ + V
Sbjct: 4 LDILLIIIIIIALIILLSGIHVLKEWERAIVLTLGRYGGIR-GPGIIFITPIVSRGIYVS 62
Query: 102 TRIRNINFSRTEDMGVAGKNQGIFRNDAINVMDSRGLTVSIELTVQYR-LNPQTTPQTIA 160
TRI+ + F K + F D + V+++ + Y+ ++PQ I
Sbjct: 63 TRIQPVQF----------KTEATFTKD--------NVPVNVDAIMYYQVIDPQKAVLNIE 104
Query: 161 TYGLSWEQKIINPVVRDVVRSVVGRYPAEDLPIKRNEIAALINSGINKEVSKLPNTPVEL 220
Y + N + +R V+G+ ++L +R +I I++ K V++
Sbjct: 105 NYSVG-----TNYAAQTTLREVIGKSMFDELLSEREKIGETAREIIDQ---KTEAWGVKV 156
Query: 221 SSIQLREIVLPAKIKEQI-----------EKVQIARQESERVKYEVERSKQEAQKQAAL- 268
+S+++R++++P++++E + +V +A+ E E + VE S+Q + L
Sbjct: 157 ASVEIRDVLVPSQLQEAMSRQASAERERRSRVTLAQAEVEAAQKMVEASRQYVENPIGLQ 216
Query: 269 AKGEADANRIKAQGVADAIVIEAKAKSQANLSISQSLSDKLLRLRQIEVQGQFNEALK 326
+ + +G + I+I ++ + ++D +L+ R + GQ E+ K
Sbjct: 217 LRWMQIIYEVGLEGKSSMIMIPSEVPVAGSTFSMFGIND-VLKSRNQTIGGQGQESQK 273
>ref|NP_127238.1| (NC_000868) STOMATIN-LIKE PROTEIN [Pyrococcus abyssi]
pir||F75003 stomatin-like protein PAB1324 - Pyrococcus abyssi (strain Orsay)
emb|CAB50468.1| (AJ248288) STOMATIN-LIKE PROTEIN [Pyrococcus abyssi]
Length = 299
Score = 62.4 bits (150), Expect = 8e-09
Identities = 63/259 (24%), Positives = 119/259 (45%), Gaps = 40/259 (15%)
Query: 46 IVIVLLGV--IAFLAKPFEVISSGEIGIKITAGKYEPTPLQPGIHFFVPIIQDILIVDTR 103
+ +++LG+ + L +VI + G+ GK+ L PGIHF +P ++ + +VD R
Sbjct: 8 VALIILGIFLLIMLLLSVKVIRPYQKGLVERLGKFNRL-LDPGIHFIIPFMERVKVVDLR 66
Query: 104 IRNINFSRTEDMGVAGKNQGIFRNDAINVMDSRGLTVSIELTVQYRLNPQTTPQTIATYG 163
I+ E V+ + V+++ V Y Q A Y
Sbjct: 67 EHVIDVPPQE------------------VICKDNVVVTVDAVVYY----QILDPVKAVYN 104
Query: 164 LSWEQKIINPVVRDVVRSVVGRYPAEDLPIKRNEIAALINSGINKEVSKLPNT-PVELSS 222
+S I + + +R+++G ++ R+ +IN+ + +E+ K+ + V+++
Sbjct: 105 VSDFLMAIVKLAQTNLRAIIGEMELDETLSGRD----IINAKLREELDKITDRWGVKITR 160
Query: 223 IQLREIVLPAKIKEQIEKVQIARQESERV------KYEVERSKQEAQKQAALAKGEADAN 276
++++ I P I+E + K A +E + K E + E QKQAA+ K E +
Sbjct: 161 VEIQRIDPPKDIQEAMAKQMTAEREKRAMILIAEGKKEAAIREAEGQKQAAILKAEGEKQ 220
Query: 277 R--IKAQGVADAI--VIEA 291
R + A+G A+AI V+EA
Sbjct: 221 RQILIAEGQAEAIRKVLEA 239
>ref|NP_196934.1| (NM_121434) prohibitin - like protein [Arabidopsis thaliana]
pir||T48603 prohibitin-like protein - Arabidopsis thaliana
emb|CAB87769.1| (AL163817) prohibitin-like protein [Arabidopsis thaliana]
Length = 249
Score = 60.8 bits (146), Expect = 2e-08
Identities = 49/210 (23%), Positives = 101/210 (47%), Gaps = 29/210 (13%)
Query: 148 YRLNPQTTPQTIATYGLSWEQKIINPVVR-----DVVRSVVGRYPAEDLPIKRNEIAALI 202
Y + +T P I T + + +++N +R DVV++VV ++ A++L +R +++ALI
Sbjct: 62 YIFDIRTKPYKINTDSGTKDLQMVNLTLRVMFRPDVVKAVVAQFNADELLTERPQVSALI 121
Query: 203 NSGINKEVSKLPNTPVELSSIQLREIVLPAKIKEQIEKVQIARQESERVKYEVERSKQEA 262
+ K + + L + + + + +E+ Q+A+QE+ER K+ V ++ QE
Sbjct: 122 RETLIKRAKEFN---IVLDDVSITGLSYGKEFSLAVERKQVAQQEAERSKFVVAKADQER 178
Query: 263 QKQAALAKGEADANRIKAQGVADAIVIEAKAKSQANLSISQSLSDKLLRLRQIEVQGQFN 322
+ A+GE++A R+ ++ A A L++LR++E +
Sbjct: 179 RAAVIRAEGESEAARVISKATAGA-------------------GMGLIKLRRVEAAREV- 218
Query: 323 EALKTNNNAQIMLTPGGAVPNIWIDTKSKV 352
A+ +N+ ++ P G ++ SKV
Sbjct: 219 -AITLSNSPNVVYLPSGGNMLFAMNGPSKV 247
>ref|NP_600748.1| (NC_003450) COG0330:Membrane protease subunits, stomatin/prohibitin
homologs [Corynebacterium glutamicum]
dbj|BAB98926.1| (AP005278) Membrane protease subunits, stomatin/prohibitin homologs
[Corynebacterium glutamicum ATCC 13032]
Length = 432
Score = 59.3 bits (142), Expect = 7e-08
Identities = 65/287 (22%), Positives = 122/287 (41%), Gaps = 36/287 (12%)
Query: 44 VLIVIVLLGVIAFLAKPFEVISSGEIGIKITAGKYEPTPLQPGIHFFVPIIQDILI-VDT 102
+L ++ L+ V + K +I GE + G Y T + G+ VP + + +DT
Sbjct: 5 ILAIVFLVFVAVVVIKSIALIPQGEAAVIERLGSYTRT-VSGGLTLLVPFVDRVRARIDT 63
Query: 103 RIRNINFSRTEDMGVAGKNQGIFRNDAINVMDSRGLTVSIELTVQYRLN-PQTTPQTIAT 161
R R ++F Q + D LTV+I++ V +++N P+ +
Sbjct: 64 RERVVSFPP----------QAVITQD--------NLTVAIDIVVTFQINEPERAIYGVDN 105
Query: 162 YGLSWEQKIINPVVRDVVRSVVGRYPAEDLPIKRNEIAALINSGINKEVSKLPNTPVELS 221
Y + EQ + +R VVG E+ R+ I + ++ +K + +S
Sbjct: 106 YIVGVEQISVA-----TLRDVVGGMTLEETLTSRDVINRRLRGELDAATTKWG---LRIS 157
Query: 222 SIQLREIVLPAKIKEQIEKVQIARQESERVKYEVERSKQEAQKQAALAKGEADANRIKAQ 281
++L+ I P I++ +EK A +E E ++ K A +GE A ++A+
Sbjct: 158 RVELKAIDPPPSIQQSMEKQMKADREKRATILTAEGQREADIKTA---EGEKQAKILQAE 214
Query: 282 GVADAIVIEAKAKSQANLSISQSLSDKLLRLRQIEVQGQFNEALKTN 328
G A ++ A+A+ QA + ++ R ++ QG+ K N
Sbjct: 215 GEKHASILNAEAERQAMILRAEGER----AARYLQAQGEARAIQKVN 257
>ref|NP_229619.1| (NC_000853) ftsH protease activity modulator HflK [Thermotoga
maritima]
pir||A72207 ftsH proteinase activity modulator HflK - Thermotoga maritima
(strain MSB8)
gb|AAD36885.1|AE001819_8 (AE001819) ftsH protease activity modulator HflK [Thermotoga
maritima]
Length = 308
Score = 59.3 bits (142), Expect = 7e-08
Identities = 61/256 (23%), Positives = 115/256 (44%), Gaps = 18/256 (7%)
Query: 40 KKLSVLIVIVLLGVIAFLAKPFEVISSGEIGIKITAGKYEPTPLQPGIHFFVPI-IQDIL 98
+K ++V ++LG+ FL ++V S E+ + T G++ + GIH+ +P IQ +
Sbjct: 2 RKYVWIVVFIVLGIY-FLTGVYQVGPS-EVALLKTFGRFTSV-VPSGIHYHLPYPIQSHV 58
Query: 99 IVD-TRIRNINFS-RTEDMGVAGKNQGIFRNDAINVMDSRGLTVSIELTVQYRLNPQTTP 156
VD T +R I R+ G Q + +AI + L VS+E VQYR+
Sbjct: 59 TVDVTTVRKIEIGFRSIQRGERISYQSV-PQEAIMITGDNNL-VSVEAVVQYRVKDPVA- 115
Query: 157 QTIATYGLSWEQKIINPVVRDVVRSVVGRYPAEDLPIKRNEIAALINSGINKEVSKLPNT 216
+ ++ I+ V+R V +D+ + + + +E+ N
Sbjct: 116 ---YAFNITEADSIVRFTTESVLREKVAMRSIDDVLTSGRDEIGFKTAQMLQEILDSYNC 172
Query: 217 PVELSSIQLREIVLPAKIKEQIEKVQIARQESERVKYEVER------SKQEAQKQAALAK 270
+++ ++ L+E+V P + + + V ARQ+ ER+ E + K + Q Q L +
Sbjct: 173 GIKVENVYLQEVVPPDPVVDAFDDVNNARQDKERLINEARKYANDVVPKAQGQAQEILRQ 232
Query: 271 GEADANRIKAQGVADA 286
EA A + + + +A
Sbjct: 233 AEAYAQEVYLKALGEA 248
>ref|NP_290805.1| (NC_002655) protease specific for phage lambda cII repressor
[Escherichia coli O157:H7 EDL933]
ref|NP_313178.1| (NC_002695) protease specific for phage lambda cII repressor
[Escherichia coli O157:H7]
ref|NP_418596.1| (NC_000913) protease specific for phage lambda cII repressor
[Escherichia coli K12]
sp|P25661|HFLC_ECOLI HflC protein
pir||C43653 probable integral membrane proteinase (EC 3.4.-.-) hflC -
Escherichia coli
gb|AAC43400.1| (U00005) putative integral membrane protease required for high
frequency lysogenization by bacteriophage lambda
[Escherichia coli]
gb|AAA97071.1| (U14003) CG Site No. 17520; alternate gene name hflA; putative
integral membrane protease required for high frequency
lysogenization by bacteriophage lambda [Escherichia
coli]
gb|AAC77132.1| (AE000489) protease specific for phage lambda cII repressor
[Escherichia coli K12]
gb|AAG59371.1|AE005650_10 (AE005650) protease specific for phage lambda cII repressor
[Escherichia coli O157:H7 EDL933]
dbj|BAB38574.1| (AP002568) protease specific for phage lambda cII repressor
[Escherichia coli O157:H7]
Length = 334
Score = 58.2 bits (139), Expect = 1e-07
Identities = 63/299 (21%), Positives = 127/299 (42%), Gaps = 83/299 (27%)
Query: 43 SVLIVIVLLGVIAFLAKPFEVISSGEIGIKITAGKY------EPTPLQPGIHFFVPIIQD 96
SV+ +I+++ V+ +++ V+ GE GI + GK +P +PG+HF +P I+
Sbjct: 4 SVIAIIIIVLVVLYMS--VFVVKEGERGITLRFGKVLRDDDNKPLVYEPGLHFKIPFIET 61
Query: 97 ILIVDTRIRNINFSRTEDMGVAGKNQGIFRNDAINVMDSRGLTVSIELTVQYRLNPQTTP 156
+ ++D RI+ ++ N A + + ++ +++R++ +
Sbjct: 62 VKMLDARIQTMD------------------NQADRFVTKEKKDLIVDSYIKWRIS-DFSR 102
Query: 157 QTIATYG--LSWEQKIINPVVRDVVRSVVGRYPAEDL----------------------- 191
+AT G +S + ++ D +RS +GR +D+
Sbjct: 103 YYLATGGGDISQAEVLLKRKFSDRLRSEIGRLDVKDIVTDSRGRLTLEVRDALNSGSAGT 162
Query: 192 ------PIKRNEIAALINSGINKEVSKLP--------NTPVELSSIQLREIVLPAKIKEQ 237
P N IA + K+P +E+ +++++I LP ++ E
Sbjct: 163 EDEVTTPAADNAIAEAAERVTAETKGKVPVINPNSMAALGIEVVDVRIKQINLPTEVSEA 222
Query: 238 I------EKVQIAR-------QESERVK----YEVERSKQEAQKQAALAKGEADANRIK 279
I E+ +AR +E+E+++ YEV R+ EA++Q + +GE DA K
Sbjct: 223 IYNRMRAEREAVARRHRSQGQEEAEKLRATADYEVTRTLAEAERQGRIMRGEGDAEAAK 281
>ref|XP_070805.1| (XM_070805) similar to prohibitin [Homo sapiens]
Length = 249
Score = 57.8 bits (138), Expect = 2e-07
Identities = 41/177 (23%), Positives = 89/177 (50%), Gaps = 8/177 (4%)
Query: 140 VSIELTVQYRLNPQTTPQTIATYGLSWEQKIINPVVRDVVRSVVGRYPAEDLPIKRNEIA 199
V++ L + +R P + G ++++ + +++SVV R+ A +L +R +I+
Sbjct: 65 VNLTLRIIFRPVASQLPHIFTSSGEDHDERVPPSITNKILKSVVARFEAGELITQREQIS 124
Query: 200 ALINSGINKEVSKLPNTPVELSSIQLREIVLPAKIKEQIEKVQIARQESERVKYEVERSK 259
++ + + + + L + L + + E +E QIA+QE+ER ++ VE+++
Sbjct: 125 RQVSDDLTEPAATFG---LILDDVSLTYLTFGKEFIEAVEAKQIAQQEAERARFVVEKAE 181
Query: 260 QEAQKQAALAKGEADANRIKAQGVADAIVIEAKAKSQ-ANLSISQSLSDKLLRLRQI 315
Q QK+AA+ E D+ A+ + +++ A + L + ++ +LLR R I
Sbjct: 182 Q--QKKAAIISAEGDSK--VAELITNSLATAGDALIELRKLEAVEDITYQLLRSRNI 234
>ref|XP_122336.1| (XM_122336) similar to PROHIBITIN (B-CELL RECEPTOR ASSOCIATED
PROTEIN 32) (BAP 32) [Mus musculus]
Length = 272
Score = 57.4 bits (137), Expect = 3e-07
Identities = 42/202 (20%), Positives = 91/202 (44%), Gaps = 24/202 (11%)
Query: 86 GIHFFVPIIQDILIVDTRIRNINFSRTEDMGVAGKNQGIFRNDAINVMDSRGL-TVSIEL 144
G HF +P +Q +I D R SR ++ V + S+ L V+I L
Sbjct: 53 GTHFLIPWVQKPIIFDCR------SRPRNVPV--------------ITGSKDLQNVNITL 92
Query: 145 TVQYRLNPQTTPQTIATYGLSWEQKIINPVVRDVVRSVVGRYPAEDLPIKRNEIAALINS 204
+ +R P+ + G ++++++ + R+ A +L +R ++ ++
Sbjct: 93 RILFRPVASQLPRIYTSIGEDYDERVLPSITTXXXXXXXARFDAGELITQRELVSRQVSD 152
Query: 205 GINKEVSKLPNTPVELSSIQLREIVLPAKIKEQIEKVQIARQESERVKYEVERSKQEAQK 264
+ + + + L + L + + E +E Q+A+QE+ER ++ VE+++Q+ +
Sbjct: 153 DLTERAATFG---LILDDVSLTHLTFGKEFTEAVEAKQVAQQEAERARFVVEKAEQQKKA 209
Query: 265 QAALAKGEADANRIKAQGVADA 286
A+G++ A + A +A A
Sbjct: 210 AIISAEGDSKAAELIANSLATA 231
>ref|NP_212337.1| (NC_001318) Lambda CII stability-governing protein (hflK) [Borrelia
burgdorferi]
sp|O51221|HFLK_BORBU HFLK protein
pir||C70125 Lambda CII stability-governing protein (hflK) homolog - Lyme
disease spirochete
gb|AAC66586.1| (AE001130) Lambda CII stability-governing protein (hflK) [Borrelia
burgdorferi]
Length = 311
Score = 57.4 bits (137), Expect = 3e-07
Identities = 64/291 (21%), Positives = 130/291 (43%), Gaps = 26/291 (8%)
Query: 42 LSVLIVIVLLGVIAFLAKPFEVISSGEIGIKITAGKYEPTPLQPGIHFFVPIIQDILIVD 101
L ++I ++L+ +I +A F ++ E I + GK T L GIH +P+I++ IV
Sbjct: 15 LIIIITLILISIIV-IANIF-IVGPSEEAIVLRLGKLNRT-LDSGIHVKIPLIEEKFIVP 71
Query: 102 TRI-RNINFSRTEDMGVAGKNQGIFRNDAINVMDSRGLTVSIELTVQYRLNPQTTPQTIA 160
+I + I F +N ND ++ ++IE VQY++
Sbjct: 72 VKIVQEIKFGFLISPSDIRENDN--ANDESRIITGDLNIINIEWLVQYKIRD-------- 121
Query: 161 TYGLSWEQKIINPVVRDVVRSVVGRYPAEDLPIK-RNEIAALINSGINKEVSKL---PNT 216
Y ++ + ++D+ +S + R ++ + N+ I G+ ++++ N
Sbjct: 122 PYSFKFKVEDPETTIKDIAKSSMNRLIGDNTIFEIINDNRVGITEGVKSSMNEIIDNYNL 181
Query: 217 PVELSSIQLREIVLP-AKIKEQIEKVQIARQESERVKYEVERSKQEAQKQAALAKGEADA 275
+++ +Q+R + P K+ E E V IA Q+ + + ++E + KGEA
Sbjct: 182 GIDVVQVQIRNALPPKGKVYEAFEDVNIAIQDKNKY---INEGRKEFNQIVPKIKGEALK 238
Query: 276 NRIKAQGVADAIVIEAKAKSQANLSISQSLSDKLLRLRQIEVQGQFNEALK 326
+A+G ++ + A A ++ I ++ D L+ I + +NE +K
Sbjct: 239 VIEEARGYKESRINNALADTE----IFNAILDAYLKNPDITKERLYNETMK 285
>ref|XP_056688.1| (XM_056688) similar to prohibitin [Homo sapiens]
Length = 201
Score = 57.0 bits (136), Expect = 3e-07
Identities = 41/180 (22%), Positives = 92/180 (50%), Gaps = 16/180 (8%)
Query: 140 VSIELTVQYRLNPQTTPQTIATYGLSWEQKIINPVVRDVVRSVVGRYPAEDLPIKRNEIA 199
V+I L + ++ P+ + G +++ ++ + ++++SVV R+ A ++ +R ++
Sbjct: 28 VNITLRIIFQPVASQLPRIFTSIGEDYDEPVLTYITTEILKSVVARFDAGEVITQRELVS 87
Query: 200 ALINSGINKEVSKLPNTPVELSSIQLREIVLPAKIKEQIEKVQIARQESERVKYEVERSK 259
+++ + ++ + + L + L + + E +E Q+A+QE+ER ++ E+++
Sbjct: 88 RQVSNDLTEQAATFG---LILDDVSLTYLTFGKEFTEAVEAKQVAQQEAERARFVKEKAE 144
Query: 260 QEAQKQAALAKGEADANRIKAQGVADAIVIEAKAKSQANLSISQSLS---DKLLRLRQIE 316
Q QK+A K K + A VI A+ S+A I+ SL+ D L+ L ++E
Sbjct: 145 Q--QKKAEQQK--------KVEQQKKAAVISAEGDSKATELIANSLATAGDGLMELCKLE 194
>ref|NP_421339.1| (NC_002696) conserved hypothetical protein [Caulobacter crescentus
CB15]
gb|AAK24507.1| (AE005921) conserved hypothetical protein [Caulobacter crescentus
CB15]
Length = 301
Score = 57.0 bits (136), Expect = 3e-07
Identities = 68/269 (25%), Positives = 121/269 (44%), Gaps = 31/269 (11%)
Query: 32 PPSNS-FNSK-----KLSVLIVIVLLGVIAFLAKPFEVISSGEIGIKI----TAGKYEPT 81
PP S F SK +SV +V++LL + + + G +G+KI + +P
Sbjct: 14 PPFKSPFQSKGKQAVAISVGVVLLLLSSCVVVTQS-STVEPGNVGVKIRTLGASAGVDPE 72
Query: 82 PLQPGIHFFVPIIQDILIVDTRIRNINFSRTEDMGVAGKNQGIFRNDAINVMDSRGLTVS 141
PL P + I + I+ R ++R D + N+ I D+ GL ++
Sbjct: 73 PL-PARWYLRGIGERIIQYPVIQRTYGYTREAD-------ERGNENEEIAFSDNTGLPMT 124
Query: 142 IELTVQYRLNPQTTPQTIATYGLSWEQKIINPVVRDVVRSVVGRYPAEDLPIK---RNEI 198
+++V ++NP + P TY LS++Q + P+ DV +V AE + ++
Sbjct: 125 ADISVTLQVNPASAPNLYQTYRLSFDQLLDGPIRNDVRSAVAAE--AEKVGVETLYSGGR 182
Query: 199 AALINSGINKEVSKLPNTPVELSSIQ-LREIVLPAKIKEQIE-KVQIARQESERVKYEVE 256
+I + K V +S + + I P I +Q++ K Q+ E E + +
Sbjct: 183 QMVIQKAYARVAGKWARHGVNISQLDWIGSIRYPQAIIQQMQAKTQL---EQEALAAKAL 239
Query: 257 RSKQEAQKQAALAK--GEADANRIKAQGV 283
+K+ A AA+AK GEA++ RIK + +
Sbjct: 240 EAKETALANAAIAKARGEAESIRIKGEAL 268
>ref|NP_216004.1| (NC_000962) hypothetical protein Rv1488 [Mycobacterium tuberculosis
H37Rv]
ref|NP_335986.1| (NC_002755) SPFH domain/Band 7 family protein [Mycobacterium
tuberculosis CDC1551]
sp|P71768|YE88_MYCTU Hypothetical protein Rv1488
pir||C70711 hypothetical protein Rv1488 - Mycobacterium tuberculosis (strain
H37RV)
emb|CAB02038.1| (Z79701) hypothetical protein Rv1488 [Mycobacterium tuberculosis
H37Rv]
gb|AAK45800.1| (AE007022) SPFH domain/Band 7 family protein [Mycobacterium
tuberculosis CDC1551]
Length = 381
Score = 56.6 bits (135), Expect = 4e-07
Identities = 59/262 (22%), Positives = 114/262 (42%), Gaps = 32/262 (12%)
Query: 44 VLIVIVLLGVIAFLAKPFEVISSGEIGIKITAGKYEPTPLQPGIHFFVPIIQDILI-VDT 102
V + ++++ I +AK +I E + G+Y T + + VP I + VD
Sbjct: 9 VFLAVLVIFAIIVVAKSVALIPQAEAAVIERLGRYSRT-VSGQLTLLVPFIDRVRARVDL 67
Query: 103 RIRNINFSRTEDMGVAGKNQGIFRNDAINVMDSRGLTVSIELTVQYRLN-PQTTPQTIAT 161
R R ++F V+ LT++I+ V +++ PQ I+
Sbjct: 68 RERVVSFPPQP------------------VITEDNLTLNIDTVVYFQVTVPQAAVYEISN 109
Query: 162 YGLSWEQKIINPVVRDVVRSVVGRYPAEDLPIKRNEIAALINSGINKEVSKLPNTPVELS 221
Y + EQ + +R+VVG E R++I A + +++ + + ++
Sbjct: 110 YIVGVEQ-----LTTTTLRNVVGGMTLEQTLTSRDQINAQLRGVLDEATGRWG---LRVA 161
Query: 222 SIQLREIVLPAKIKEQIEKVQIARQESERVKYEVERSKQEAQKQAALAKGEADANRIKAQ 281
++LR I P I+ +EK A +E + E +++ A KQ A+G+ A + A+
Sbjct: 162 RVELRSIDPPPSIQASMEKQMKADREKRAMILTAEGTREAAIKQ---AEGQKQAQILAAE 218
Query: 282 GVADAIVIEAKAKSQANLSISQ 303
G A ++ A+A Q+ + +Q
Sbjct: 219 GAKQAAILAAEADRQSRMLRAQ 240
>ref|NP_065380.1| (NC_002525) 77 pct identical to sp:YBBK_ECOLI[hypothetical 33kd
protein of E. coli] [Escherichia coli]
dbj|BAB12673.1| (AP002527) 77 pct identical to sp:YBBK_ECOLI[hypothetical 33kd
protein of E. coli] [Escherichia coli]
Length = 325
Score = 56.2 bits (134), Expect = 6e-07
Identities = 69/330 (20%), Positives = 149/330 (44%), Gaps = 49/330 (14%)
Query: 43 SVLIVIVLLGVIAFLAKPFEVISSGEIGIKITAGKYEPTPLQPGIHFFVPIIQDILIVDT 102
S+ +++++L + F+ +++ G GKY T L PG+HF +P + I
Sbjct: 12 SIPLLLLILVALIFVKSAVKIVPQGNAWTVERFGKYTHT-LSPGLHFLIPFMDRIG---- 66
Query: 103 RIRNINFSRTEDMGVAGKNQGIFRNDAINVMDSRGLTVSIELTVQYRLNPQTTPQTIATY 162
+ IN T + Q + D NV T+ Q A Y
Sbjct: 67 --QRINMMETV---LDVPKQEVISKDNANV------------TIDAVCFIQVIDAAKAAY 109
Query: 163 GLSWEQKIINPVVRDVVRSVVGRYPAEDLPIKRNEIAALINSGINKEVSKLPNTPVELSS 222
+ I+ +V +R+VVG +D+ +R+ I + + + ++ ++++
Sbjct: 110 EVDNLASAISNLVMTNIRTVVGGMNLDDMLSQRDSINSKLLTVVDYATDPWG---IKVTR 166
Query: 223 IQLREIVLPAKIKEQIEKVQIARQESERVKY-EVERSKQEAQKQAALAKGEADANRIKAQ 281
I++R++ P E++ K A+ ++ER K ++ ++ Q Q A+GE + +KA+
Sbjct: 167 IEIRDVKPP----EELTKAMNAQMKAERTKRAQILEAEGIRQSQILKAEGEKQSQILKAE 222
Query: 282 GVADAIVI-------EAKAKSQANLSISQSLSDKLLRLRQIEVQGQFNEALK---TNNNA 331
G + + +A+A+++A +S ++++ ++ + ++ EAL+ T +N+
Sbjct: 223 GERQSAFLQSEARERQAEAEARATKLVSDAIAEGDVQSVNYFIAQKYTEALQAIGTASNS 282
Query: 332 QIMLTPGGAVPNIWIDTKSKVKSSIAETKE 361
++++ P +D+ S V SS+A E
Sbjct: 283 KLVMMP--------LDSSSLV-SSVAGISE 303
>ref|NP_103040.1| (NC_002678) protease subunit hflK [Mesorhizobium loti]
dbj|BAB48826.1| (AP002997) protease subunit; HflK [Mesorhizobium loti]
Length = 371
Score = 56.2 bits (134), Expect = 6e-07
Identities = 55/258 (21%), Positives = 115/258 (44%), Gaps = 23/258 (8%)
Query: 45 LIVIVLLGVIAFLAKPFEVISSGEIGIKITAGKYEPTPLQPGIHFFVPIIQDILIVDTRI 104
LI VL+ + AF A + E+ +++ GK + QPG+HF ++ +
Sbjct: 69 LIAAVLVALWAFQA--VYTVQPDEVAVELRFGKPKAELSQPGLHFHWWPLETV-----ET 121
Query: 105 RNINFSRTEDMGVAGKNQGIFRNDAINVMDSRGLTVSIELTVQYRLNPQTTPQTIATYGL 164
I+ + G G+ + N+ V+++ +V Y Q + + +
Sbjct: 122 AKISEQLVDIGGGNTSGNGLMLSGDQNI-------VNVQFSVAY----QVSDPRAYLFDV 170
Query: 165 SWEQKIINPVVRDVVRSVVGRYPAEDL-PIKRNEIAALINSGINKEVSKLPNTPVELSSI 223
S ++ V +R VGR PA+D+ R IAA + I + + ++++
Sbjct: 171 SDPDGMLRQVAESAMREAVGRRPAQDIFRDDRQGIAASVREIIQSTLDGY-KAGLNVNAV 229
Query: 224 QLREIVLPAKIKEQIEKVQIARQESERVKYEVERSKQEAQKQAALAKGEADANRIKAQGV 283
+ + P ++ + ++VQ A Q+ ++ VE++ Q + ++ A+G+A R A
Sbjct: 230 SIEDAAPPREVADAFDEVQRAEQDEDKF---VEQANQYSNQKLGQARGQAAQIREDAAAY 286
Query: 284 ADAIVIEAKAKSQANLSI 301
+ +V EA+ ++Q +S+
Sbjct: 287 KNRVVQEAEGEAQRFISV 304
>ref|NP_343577.1| (NC_002754) Erythrocyte band 7 membrane protein homolog [Sulfolobus
solfataricus]
gb|AAK42367.1| (AE006825) Erythrocyte band 7 membrane protein homolog [Sulfolobus
solfataricus]
Length = 267
Score = 56.2 bits (134), Expect = 6e-07
Identities = 62/293 (21%), Positives = 123/293 (41%), Gaps = 48/293 (16%)
Query: 46 IVIVLLGVIAFLAKPFEVISSGEIGIKITAGKYEPTPLQPGIHFFVPIIQDILIVDTRIR 105
IV +++ +I F+A F V+ E + + G++ PGI F +P + L+VD R+
Sbjct: 11 IVFLIIIIIIFIAMSFRVVREWERAVVLRLGRFLRVK-GPGIIFLIPFVDRPLVVDLRVN 69
Query: 106 NINFSRTEDMGVAGKNQGIFRNDAINVMDSRGLTVSIELTVQYR-LNPQTTPQTIATYGL 164
+ ++ +TVS++ V Y+ ++PQ ++ Y +
Sbjct: 70 TVEVPPQ------------------TILTKDNVTVSVDAVVYYKVVDPQKAVLSVFNYNV 111
Query: 165 SWEQKIINPVVRDVVRSVVGRYPAEDLPIKRNEIAALINSGINKEVSKLPNTPVELSSIQ 224
+ ++N + + +R +VG+ ++L KR E INK + ++ + E I+
Sbjct: 112 A----VLN-LAQTSLRDIVGQMELDELLSKREE--------INKRIQEILDVTTEGWGIK 158
Query: 225 LREIVL-PAKIKEQIEKVQIARQESERVKYEVERSKQEAQKQAALAKGEADANRIKAQGV 283
+ + + ++ + + + E+ER++ + + L++GE A I +
Sbjct: 159 VTAVTIRDIRLSQDLLSAMAKQAEAERLR----------RAKVILSEGERQAASI----L 204
Query: 284 ADAIVIEAKAKSQANLSISQSLSDKLLRLRQIEVQGQFNEALKTNNNAQIMLT 336
ADA S L ++LSD R I V NE T + + T
Sbjct: 205 ADASAYYKNNPSALQLRFLETLSDISQRGGLIIVVPAGNEIYPTLGTSAALST 257
>ref|NP_458800.1| (NC_003198) HflC protein [Salmonella enterica subsp. enterica
serovar Typhi]
ref|NP_463225.1| (NC_003197) with HflK, part of modulator for protease specific for
FtsH phage lambda cII repressor [Salmonella typhimurium
LT2]
gb|AAL23184.1| (AE008905) with HflK, part of modulator for protease specific for
FtsH phage lambda cII repressor [Salmonella typhimurium
LT2]
emb|CAD06841.1| (AL627283) HflC protein [Salmonella enterica subsp. enterica
serovar Typhi]
Length = 334
Score = 56.2 bits (134), Expect = 6e-07
Identities = 64/299 (21%), Positives = 131/299 (43%), Gaps = 83/299 (27%)
Query: 43 SVLIVIVLLGVIAFLAKPFEVISSGEIGIKITAGKY------EPTPLQPGIHFFVPIIQD 96
SV+ +I+++ V+ +++ V+ GE GI + GK +P PG+HF +P I+
Sbjct: 4 SVIAIIIIVLVVLYMS--VFVVKEGERGITLRFGKVLRDDENKPLVYAPGLHFKIPFIES 61
Query: 97 ILIVDTRIRNINFSRTEDMGVAGKNQGIFRNDAINVMDSRGLTVSIELTVQYRLNPQTTP 156
+ ++D RI+ ++ N A + + ++ +++R++ +
Sbjct: 62 VKMLDARIQTMD------------------NQADRFVTKEKKDLIVDSYIKWRIS-DFSR 102
Query: 157 QTIATYG--LSWEQKIINPVVRDVVRSVVGRYPAEDLPIKRN-----EIAALINS---GI 206
+AT G +S + ++ D +RS +GR +D+ E+ +NS G
Sbjct: 103 YYLATGGGDISQAEVLLKRKFSDRLRSEIGRLDVKDIVTDSRGRLTLEVRDALNSGSAGT 162
Query: 207 NKEVS---------------------KLP--------NTPVELSSIQLREIVLPAKIKEQ 237
+ EV+ K+P +E+ +++++I LP ++ E
Sbjct: 163 DDEVATPAADDAIAEAAERVTAETKGKVPVINPNSMAALGIEVVDVRIKQINLPTEVSEA 222
Query: 238 I------EKVQIAR-------QESERVK----YEVERSKQEAQKQAALAKGEADANRIK 279
I E+ +AR +E+E+++ YEV ++ EA++Q + +GE DA K
Sbjct: 223 IYNRMRAEREAVARRHRSQGQEEAEKLRAAADYEVTKTLAEAERQGRIMRGEGDAEAAK 281
>gb|AAH14228.1|AAH14228 (BC014228) Unknown (protein for MGC:20874) [Homo sapiens]
Length = 201
Score = 55.8 bits (133), Expect = 7e-07
Identities = 41/180 (22%), Positives = 91/180 (49%), Gaps = 16/180 (8%)
Query: 140 VSIELTVQYRLNPQTTPQTIATYGLSWEQKIINPVVRDVVRSVVGRYPAEDLPIKRNEIA 199
V+I L + ++ P+ + G +++ ++ + ++++SVV R+ A ++ +R ++
Sbjct: 28 VNITLRIIFQPVASQLPRIFTSIGEDYDEPVLTYITTEILKSVVARFDAGEVITQRELVS 87
Query: 200 ALINSGINKEVSKLPNTPVELSSIQLREIVLPAKIKEQIEKVQIARQESERVKYEVERSK 259
+++ + ++ + + L + L + + E +E Q+A+QE+ER ++ E+++
Sbjct: 88 RQVSNDLTEQAATFG---LILDDVSLTYLTFGKEFTEAVEAKQVAQQEAERARFVKEKAE 144
Query: 260 QEAQKQAALAKGEADANRIKAQGVADAIVIEAKAKSQANLSISQSLS---DKLLRLRQIE 316
Q QK+A K K + A VI A+ S+A I SL+ D L+ L ++E
Sbjct: 145 Q--QKKAEQQK--------KVEQQKKAAVISAEGDSKATELIVNSLATAGDGLMELCKLE 194
>gb|AAF42676.1|AF226528_1 (AF226528) membrane protein GNA1220 [Neisseria meningitidis]
gb|AAF42681.1|AF226533_1 (AF226533) membrane protein GNA1220 [Neisseria meningitidis]
Length = 315
Score = 55.8 bits (133), Expect = 7e-07
Identities = 61/287 (21%), Positives = 126/287 (43%), Gaps = 30/287 (10%)
Query: 47 VIVLLGVIAFLAKPFEVISSGEIGIKITAGKYEPTPLQPGIHFFVPIIQDILIVDTRIRN 106
+I+L+ V F K F VI E+ + G++ L G++ +P I D + ++
Sbjct: 5 IILLVAVAVFGFKSFVVIPQQEVHVVERLGRFHRA-LTAGLNILIPFI-DRVAYRHSLKE 62
Query: 107 INFSRTEDMGVAGKNQGIFRNDAINVMDSRGLTVSIELTVQYRLNPQTTPQTIATYGLSW 166
I + + N +LTV + Q T +A+YG S
Sbjct: 63 IPLDVPSQVCITRDNT--------------------QLTVDGIIYFQVTDPKLASYGSSN 102
Query: 167 EQKIINPVVRDVVRSVVGRYPAEDLPIKRNEIAALINSGINKEVSKLPNTPVELSSIQLR 226
I + + +RSV+GR + +R+EI +++ S +++ V++ +++
Sbjct: 103 YIMAITQLAQTTLRSVIGRMELDKTFEERDEINSIVVSALDEAAGA---WGVKVLRYEIK 159
Query: 227 EIVLPAKIKEQIEKVQIARQESERVKYEVERSKQEAQKQAALAKGEADANRIKAQGVADA 286
++V P +I ++ QI + +R + + S+ +Q LA G+ +A +++G A A
Sbjct: 160 DLVPPQEILRSMQ-AQITAEREKRAR--IAESEGRKIEQINLASGQREAEIQQSEGEAQA 216
Query: 287 IVIEAKAKSQANLSISQSLSDKLLRLRQIEVQG--QFNEALKTNNNA 331
V + A+ A ++ ++ ++ L + + + Q AL+T A
Sbjct: 217 AVNASNAEKIARINRAKGEAESLRLVAEANAEAIRQIAAALQTQGGA 263
>ref|XP_142216.1| (XM_142216) similar to PROHIBITIN (B-CELL RECEPTOR ASSOCIATED
PROTEIN 32) (BAP 32) [Mus musculus]
Length = 365
Score = 55.5 bits (132), Expect = 1e-06
Identities = 40/171 (23%), Positives = 85/171 (49%), Gaps = 10/171 (5%)
Query: 140 VSIELTVQYRLNPQTTPQTIATYGLSWEQKIINPVVRDVVRSVVGRYPAEDLPIKRNEIA 199
V+I + + + L P G ++++++ + ++ +SVV ++ A +L KR ++
Sbjct: 43 VNITVRILFWLVASHLPHIYTNIGEDYDERVLPSITTEIFKSVVSQFDAGELVTKRELVS 102
Query: 200 ALINSGINKEVSKLPNTPVELSSIQLREIVLPAKIKEQIEKVQIARQESERVKYEVERSK 259
+ + + + + L I L + + E I+ Q+A+QE+ER ++ VE+++
Sbjct: 103 RQVCDDLTERAATFG---LILDDIYLTHLTFRKEFTETIKAKQVAQQEAERARFLVEKAE 159
Query: 260 QEAQKQAALAKGEADANR----IKAQGVADAIVIEAKAKSQANLSISQSLS 306
Q Q++AA+ E D+ + + A A +IE + K +A I+ LS
Sbjct: 160 Q--QQKAAIISAEGDSKEAELIVNSLATAGAGLIELR-KLEAAEDIAYQLS 207
>ref|NP_284125.1| (NC_003116) putative periplasmic protein [Neisseria meningitidis
Z2491]
pir||H81907 probable periplasmic protein NMA1382 [imported] - Neisseria
meningitidis (group A strain Z2491)
gb|AAF42661.1|AF226512_1 (AF226512) membrane protein GNA1220 [Neisseria meningitidis]
gb|AAF42689.1|AF226541_1 (AF226541) membrane protein GNA1220 [Neisseria meningitidis]
emb|CAB84628.1| (AL162755) putative periplasmic protein [Neisseria meningitidis
Z2491]
Length = 315
Score = 55.5 bits (132), Expect = 1e-06
Identities = 61/287 (21%), Positives = 125/287 (43%), Gaps = 30/287 (10%)
Query: 47 VIVLLGVIAFLAKPFEVISSGEIGIKITAGKYEPTPLQPGIHFFVPIIQDILIVDTRIRN 106
+I+L V+ F K F VI E+ + G++ L G++ +P I D + ++
Sbjct: 5 IILLAAVVVFGFKSFVVIPQQEVHVVERLGRFHRA-LTAGLNILIPFI-DRVAYRHSLKE 62
Query: 107 INFSRTEDMGVAGKNQGIFRNDAINVMDSRGLTVSIELTVQYRLNPQTTPQTIATYGLSW 166
I + + N +LTV + Q T +A+YG S
Sbjct: 63 IPLDVPSQVCITRDNT--------------------QLTVDGIIYFQVTDPKLASYGSSN 102
Query: 167 EQKIINPVVRDVVRSVVGRYPAEDLPIKRNEIAALINSGINKEVSKLPNTPVELSSIQLR 226
I + + +RSV+GR + +R+EI + + S +++ V++ +++
Sbjct: 103 YIMAITQLAQTTLRSVIGRMELDKTFEERDEINSTVVSALDEAAGA---WGVKVLRYEIK 159
Query: 227 EIVLPAKIKEQIEKVQIARQESERVKYEVERSKQEAQKQAALAKGEADANRIKAQGVADA 286
++V P +I ++ QI + +R + + S+ +Q LA G+ +A +++G A A
Sbjct: 160 DLVPPQEILRSMQ-AQITAEREKRAR--IAESEGRKIEQINLASGQREAEIQQSEGEAQA 216
Query: 287 IVIEAKAKSQANLSISQSLSDKLLRLRQIEVQG--QFNEALKTNNNA 331
V + A+ A ++ ++ ++ L + + + Q AL+T A
Sbjct: 217 AVNASNAEKIARINRAKGEAESLRLVAEANAEAIRQIAAALQTQGGA 263
>gb|AAF42675.1|AF226527_1 (AF226527) membrane protein GNA1220 [Neisseria meningitidis]
Length = 315
Score = 55.1 bits (131), Expect = 1e-06
Identities = 61/287 (21%), Positives = 125/287 (43%), Gaps = 30/287 (10%)
Query: 47 VIVLLGVIAFLAKPFEVISSGEIGIKITAGKYEPTPLQPGIHFFVPIIQDILIVDTRIRN 106
+I+L V F K F VI E+ + G++ L G++ +P I D + ++
Sbjct: 5 IILLAAVAVFGFKSFVVIPQQEVHVVERLGRFHRA-LTAGLNILIPFI-DRVAYRHSLKE 62
Query: 107 INFSRTEDMGVAGKNQGIFRNDAINVMDSRGLTVSIELTVQYRLNPQTTPQTIATYGLSW 166
I + + N +LTV + Q T +A+YG S
Sbjct: 63 IPLDVPSQVCITRDNT--------------------QLTVDGIIYFQVTDPKLASYGSSN 102
Query: 167 EQKIINPVVRDVVRSVVGRYPAEDLPIKRNEIAALINSGINKEVSKLPNTPVELSSIQLR 226
I + + +RSV+GR + +R+EI +++ S +++ V++ +++
Sbjct: 103 YIMAITQLAQTTLRSVIGRMELDKTFEERDEINSIVVSALDEAAGA---WGVKVLRYEIK 159
Query: 227 EIVLPAKIKEQIEKVQIARQESERVKYEVERSKQEAQKQAALAKGEADANRIKAQGVADA 286
++V P +I ++ QI + +R + + S+ +Q LA G+ +A +++G A A
Sbjct: 160 DLVPPQEILRSMQ-AQITAEREKRAR--IAESEGRKIEQINLASGQREAEIQQSEGEAQA 216
Query: 287 IVIEAKAKSQANLSISQSLSDKLLRLRQIEVQG--QFNEALKTNNNA 331
V + A+ A ++ ++ ++ L + + + Q AL+T A
Sbjct: 217 AVNASNAEKIARINRAKGEAESLRLVAEANAEAIRQIAAALQTQGGA 263
>ref|NP_488427.1| (NC_003272) hypothetical protein [Nostoc sp. PCC 7120]
dbj|BAB76086.1| (AP003596) ORF_ID:all4387~hypothetical protein [Nostoc sp. PCC
7120]
Length = 278
Score = 54.7 bits (130), Expect = 2e-06
Identities = 50/258 (19%), Positives = 112/258 (43%), Gaps = 32/258 (12%)
Query: 46 IVIVLLGVIAFLAKPFEVISSGEIGIKITAGKYEPTPLQPGIHFFVPIIQDILIVDTRIR 105
I+ ++L +I + ++I+ G + G+ T L PG++F VP++ +++ DT
Sbjct: 4 IIAIVLALIGYALGSAKIINEGNAALVERLGRRHRT-LNPGLNFIVPLVDQVVMEDT--- 59
Query: 106 NINFSRTEDMGVAGKNQGIFRNDAINVMDSRGLTVSIELTVQYRLNPQTTPQTIATYGLS 165
T + + K Q + D + + ++ + +R+ + Y +
Sbjct: 60 ------TREQFIDIKPQNVITRD--------NIYLEVDAILFWRIRDMEK----SFYAIE 101
Query: 166 WEQKIINPVVRDVVRSVVGRYPAEDLPIKRNEIAALINSGINKEVSKLPNTPVELSSIQL 225
Q + + +R V+ + ED + R+E+ I S +N S + VE+ + +
Sbjct: 102 DLQGALTQLATTTLREVIAQNTVEDTNVTRDEMNRTILSELN---STTADWGVEIIRLDI 158
Query: 226 REIVLPAKIKEQIEKVQIARQESERVKYEVERSKQEAQKQAALAKGEADANRIKAQGVAD 285
+ I P +++ +E+ + + K S+ E ++QAA+ K A+ Q +A+
Sbjct: 159 QRITPPESVRKTMEE-----ERAAEFKKRALISEAEGERQAAIKK--AEGTMTSMQIIAE 211
Query: 286 AIVIEAKAKSQANLSISQ 303
A+ ++K ++Q
Sbjct: 212 ALRSNPESKEILRYLVAQ 229
>ref|NP_228675.1| (NC_000853) conserved hypothetical protein [Thermotoga maritima]
pir||E72322 conserved hypothetical protein - Thermotoga maritima (strain MSB8)
gb|AAD35948.1|AE001753_4 (AE001753) conserved hypothetical protein [Thermotoga maritima]
Length = 305
Score = 54.7 bits (130), Expect = 2e-06
Identities = 61/290 (21%), Positives = 130/290 (44%), Gaps = 49/290 (16%)
Query: 44 VLIVIVLLGVIAFLAKPFEVISSGEIGIKITAGKYEPTPLQPGIHFFVPIIQDILIVDTR 103
+ +V+++ +I A ++ E G+ GK++ + G+HF +P + ++ VD R
Sbjct: 3 IALVVLVFFLIVLAASSIRIVRPYERGLVERLGKFK-REVGAGVHFIIPFFERMIKVDMR 61
Query: 104 IRNINFSRTEDMGVAGKNQGIFRNDAINVMDSRGLTVSIELTVQYRLNPQTTPQTIATYG 163
+ I+ E I R++ + +D+ + E+T YR+ + +AT
Sbjct: 62 EKVIDVPPQEV---------ITRDNVVVTVDA---VIYYEITDAYRVVYNVSNFEMATIK 109
Query: 164 LSWEQKIINPVVRDVVRSVVGRYPAEDLPIKRNEIAALINSGINKEVSKLPNTPVELSSI 223
L+ +R+V+G + R I + + +++ K V ++ +
Sbjct: 110 LAQTN----------LRNVIGELELDQTLTSRERINMKLRTVLDEATDKWG---VRITRV 156
Query: 224 QLREIVLPAKIKEQIEKVQIARQESERVKYEVERSKQEAQKQAAL--AKGEADANRIKAQ 281
++++I P I + + K + K E K+AA+ A+G A +KA+
Sbjct: 157 EIKKIDPPQDITDAMSK----------------QMKAERTKRAAILEAEGYKQAEILKAE 200
Query: 282 GVADAIVIEAKAKSQANLSISQSLSDKLLRLRQIEVQGQFNEALKTNNNA 331
G +A ++ A+ +++A ++++ KL+ +E +GQ EA+K NA
Sbjct: 201 GQKNAAILRAEGEAEAIKRVAEANMQKLI----LEARGQ-AEAIKLVFNA 245
>gb|AAF42660.1|AF226511_1 (AF226511) membrane protein GNA1220 [Neisseria meningitidis]
gb|AAF42662.1|AF226513_1 (AF226513) membrane protein GNA1220 [Neisseria meningitidis]
gb|AAF42664.1|AF226515_1 (AF226515) membrane protein GNA1220 [Neisseria meningitidis]
gb|AAF42666.1|AF226517_1 (AF226517) membrane protein GNA1220 [Neisseria meningitidis]
gb|AAF42667.1|AF226518_1 (AF226518) membrane protein GNA1220 [Neisseria meningitidis]
gb|AAF42669.1|AF226521_1 (AF226521) membrane protein GNA1220 [Neisseria meningitidis]
gb|AAF42671.1|AF226523_1 (AF226523) membrane protein GNA1220 [Neisseria meningitidis]
gb|AAF42679.1|AF226531_1 (AF226531) membrane protein GNA1220 [Neisseria meningitidis]
gb|AAF42684.1|AF226536_1 (AF226536) membrane protein GNA1220 [Neisseria meningitidis]
gb|AAF42685.1|AF226537_1 (AF226537) membrane protein GNA1220 [Neisseria meningitidis]
gb|AAF42687.1|AF226539_1 (AF226539) membrane protein GNA1220 [Neisseria meningitidis]
Length = 315
Score = 54.7 bits (130), Expect = 2e-06
Identities = 61/287 (21%), Positives = 125/287 (43%), Gaps = 30/287 (10%)
Query: 47 VIVLLGVIAFLAKPFEVISSGEIGIKITAGKYEPTPLQPGIHFFVPIIQDILIVDTRIRN 106
+I+L+ V F K F VI E+ + G++ L G++ +P I D + ++
Sbjct: 5 IILLVAVAVFGFKSFVVIPQQEVHVVERLGRFHRA-LTAGLNILIPFI-DRVAYRHSLKE 62
Query: 107 INFSRTEDMGVAGKNQGIFRNDAINVMDSRGLTVSIELTVQYRLNPQTTPQTIATYGLSW 166
I + + N +LTV + Q T +A+YG S
Sbjct: 63 IPLDVPSQVCITRDNT--------------------QLTVDGIIYFQVTDPKLASYGSSN 102
Query: 167 EQKIINPVVRDVVRSVVGRYPAEDLPIKRNEIAALINSGINKEVSKLPNTPVELSSIQLR 226
I + + +RSV+GR + +R+EI + + S +++ V++ +++
Sbjct: 103 YIMAITQLAQTTLRSVIGRMELDKTFEERDEINSTVVSALDEAAGA---WGVKVLRYEIK 159
Query: 227 EIVLPAKIKEQIEKVQIARQESERVKYEVERSKQEAQKQAALAKGEADANRIKAQGVADA 286
++V P +I ++ QI + +R + + S+ +Q LA G+ +A +++G A A
Sbjct: 160 DLVPPQEILRSMQ-AQITAEREKRAR--IAESEGRKIEQINLASGQREAEIQQSEGEAQA 216
Query: 287 IVIEAKAKSQANLSISQSLSDKLLRLRQIEVQG--QFNEALKTNNNA 331
V + A+ A ++ ++ ++ L + + + Q AL+T A
Sbjct: 217 AVNASNAEKIARINRAKGEAESLRLVAEANAEAIRQIAAALQTQGGA 263
>ref|NP_302223.1| (NC_002677) conserved hypothetical protein [Mycobacterium leprae]
emb|CAC30755.1| (AL583923) conserved hypothetical protein [Mycobacterium leprae]
Length = 374
Score = 54.7 bits (130), Expect = 2e-06
Identities = 64/286 (22%), Positives = 120/286 (41%), Gaps = 36/286 (12%)
Query: 44 VLIVIVLLGVIAFLAKPFEVISSGEIGIKITAGKYEPTPLQPGIHFFVPIIQDILI-VDT 102
VL+ ++ + I +AK +I E + G+Y T + + V I + VD
Sbjct: 9 VLLAVLTIFAIVVVAKSIVLIPQAEAAVVERLGRYGRT-VSGQLTLLVLFIDRVRARVDL 67
Query: 103 RIRNINFSRTEDMGVAGKNQGIFRNDAINVMDSRGLTVSIELTVQYRLN-PQTTPQTIAT 161
R R ++F V+ LT++I+ V +++ PQ I+
Sbjct: 68 RERVVSFPPQP------------------VITEDNLTLNIDTVVYFQVTVPQAAVYEISN 109
Query: 162 YGLSWEQKIINPVVRDVVRSVVGRYPAEDLPIKRNEIAALINSGINKEVSKLPNTPVELS 221
Y + EQ + +R+VVG E R++I A + +++ + + ++
Sbjct: 110 YIVGVEQ-----LTTTTLRNVVGGMTLEQTLTSRDQINAQLRGVLDEATGRWG---LRVA 161
Query: 222 SIQLREIVLPAKIKEQIEKVQIARQESERVKYEVERSKQEAQKQAALAKGEADANRIKAQ 281
++LR I P I+ +EK A +E + E +++ A KQ A+G A + A+
Sbjct: 162 RVELRSIDPPPSIQTSMEKQMKADREKRAMILTAEGTREAAIKQ---AEGNKQAQILAAE 218
Query: 282 GVADAIVIEAKAKSQANLSISQSLSDKLLRLRQIEVQGQFNEALKT 327
G A+++ A+A Q+ + +Q ++ QGQ KT
Sbjct: 219 GAKQAVILAAEADRQSRMLRAQGKR----AAAYLQAQGQAKAIEKT 260
>gb|AAF42668.1|AF226519_1 (AF226519) membrane protein GNA1220 [Neisseria meningitidis]
Length = 315
Score = 54.3 bits (129), Expect = 2e-06
Identities = 60/287 (20%), Positives = 125/287 (42%), Gaps = 30/287 (10%)
Query: 47 VIVLLGVIAFLAKPFEVISSGEIGIKITAGKYEPTPLQPGIHFFVPIIQDILIVDTRIRN 106
+I+L V+ F K F VI E+ + G++ L G++ +P I D + ++
Sbjct: 5 IILLAAVVVFGFKSFVVIPQQEVHVVERLGRFHRA-LTAGLNILIPFI-DRVAYRHSLKE 62
Query: 107 INFSRTEDMGVAGKNQGIFRNDAINVMDSRGLTVSIELTVQYRLNPQTTPQTIATYGLSW 166
I + + N +LTV + Q T +A+YG S
Sbjct: 63 IPLDVPSQVCITRDNT--------------------QLTVDGIIYFQVTDPKLASYGSSN 102
Query: 167 EQKIINPVVRDVVRSVVGRYPAEDLPIKRNEIAALINSGINKEVSKLPNTPVELSSIQLR 226
I + + +RSV+GR + +R+EI + + + +++ V++ +++
Sbjct: 103 YIMAITQLAQTTLRSVIGRMELDKTFEERDEINSTVVAALDEAAGA---WGVKVLRYEIK 159
Query: 227 EIVLPAKIKEQIEKVQIARQESERVKYEVERSKQEAQKQAALAKGEADANRIKAQGVADA 286
++V P +I ++ QI + +R + + S+ +Q LA G+ +A +++G A A
Sbjct: 160 DLVPPQEILRSMQ-AQITAEREKRAR--IAESEGRKIEQINLASGQREAEIQQSEGEAQA 216
Query: 287 IVIEAKAKSQANLSISQSLSDKLLRLRQIEVQG--QFNEALKTNNNA 331
V + A+ A ++ ++ ++ L + + + Q AL+T A
Sbjct: 217 AVNASNAEKIARINRAKGEAESLRLVAEANAEAIRQIAAALQTQGGA 263
>ref|NP_561976.1| (NC_003366) conserved hypothetical protein [Clostridium
perfringens]
dbj|BAB80766.1| (AP003189) conserved hypothetical protein [Clostridium perfringens]
Length = 316
Score = 54.3 bits (129), Expect = 2e-06
Identities = 57/292 (19%), Positives = 136/292 (46%), Gaps = 35/292 (11%)
Query: 43 SVLIVIVLLGVIAFLAKPFEVISSGEIGIKITAGKYEPTPLQPGIHFFVPIIQDILIVDT 102
+V+I+I+LL V+ +V+++G + + G++ L+PG H +P
Sbjct: 4 TVIIIILLLIVVFAAISSIKVVNTGYVYVLERFGQFSKI-LEPGWHLVIPFA-------- 54
Query: 103 RIRNINFSRTEDMGVAGKNQGIFRNDAINVMDSRGLTVSIELTVQYR-LNPQTTPQTIAT 161
+F R + Q I V+ + + I+ + Y+ LN + I
Sbjct: 55 -----DFVRKK----ISTKQQILDIPPQYVITKDNVKIEIDNVIFYKVLNAKDAVYNIED 105
Query: 162 YGLSWEQKIINPVVRDVVRSVVGRYPAEDLPIKRNEIAALINSGINKEVSKLPNTPVELS 221
+ + I+ + ++ R++VG +++ R++I + + I+ +++
Sbjct: 106 F----KSGIVYSTITNM-RNIVGNMSLDEVLSGRDKINLELLTIIDSITDAYG---IKIL 157
Query: 222 SIQLREIVLPAKIKEQIEKVQIARQESERV--------KYEVERSKQEAQKQAALAKGEA 273
S++++ I+ PA+I++ +EK A ++ + E+ R++ E Q + A+ E
Sbjct: 158 SVEIKNIIPPAEIQDAMEKQMKAERDKRATILQAEGLKQSEIARAEAEKQAKILRAEAEK 217
Query: 274 DANRIKAQGVADAIVIEAKAKSQANLSISQSLSDKLLRLRQIEVQGQFNEAL 325
+AN A+G+ ++ ++EA+ K++A +S++ + + R+ ++ NE +
Sbjct: 218 EANIRHAEGLKESQLLEAEGKARAIEEVSKAEAAAIERINTSIIESGTNEVV 269
>ref|NP_274245.1| (NC_003112) stomatin/Mec-2 family protein [Neisseria meningitidis
MC58]
pir||F81107 stomatin/Mec-2 family protein NMB1220 [imported] - Neisseria
meningitidis (group B strain MD58)
gb|AAF41602.1| (AE002470) stomatin/Mec-2 family protein [Neisseria meningitidis
MC58]
gb|AAF42670.1|AF226522_1 (AF226522) membrane protein GNA1220 [Neisseria meningitidis]
gb|AAF42672.1|AF226524_1 (AF226524) membrane protein GNA1220 [Neisseria meningitidis]
gb|AAF42673.1|AF226525_1 (AF226525) membrane protein GNA1220 [Neisseria meningitidis]
gb|AAF42674.1|AF226526_1 (AF226526) membrane protein GNA1220 [Neisseria meningitidis]
gb|AAF42677.1|AF226529_1 (AF226529) membrane protein GNA1220 [Neisseria meningitidis]
gb|AAF42678.1|AF226530_1 (AF226530) membrane protein GNA1220 [Neisseria meningitidis]
gb|AAF42680.1|AF226532_1 (AF226532) membrane protein GNA1220 [Neisseria meningitidis]
gb|AAF42683.1|AF226535_1 (AF226535) membrane protein GNA1220 [Neisseria meningitidis]
gb|AAF42686.1|AF226538_1 (AF226538) membrane protein GNA1220 [Neisseria meningitidis]
gb|AAF42688.1|AF226540_1 (AF226540) membrane protein GNA1220 [Neisseria meningitidis]
Length = 315
Score = 53.5 bits (127), Expect = 4e-06
Identities = 60/287 (20%), Positives = 125/287 (42%), Gaps = 30/287 (10%)
Query: 47 VIVLLGVIAFLAKPFEVISSGEIGIKITAGKYEPTPLQPGIHFFVPIIQDILIVDTRIRN 106
+I+L+ V F K F VI E+ + G++ L G++ +P I D + ++
Sbjct: 5 IILLVAVAVFGFKSFVVIPQQEVHVVERLGRFHRA-LTAGLNILIPFI-DRVAYRHSLKE 62
Query: 107 INFSRTEDMGVAGKNQGIFRNDAINVMDSRGLTVSIELTVQYRLNPQTTPQTIATYGLSW 166
I + + N +LTV + Q T +A+YG S
Sbjct: 63 IPLDVPSQVCITRDNT--------------------QLTVDGIIYFQVTDPKLASYGSSN 102
Query: 167 EQKIINPVVRDVVRSVVGRYPAEDLPIKRNEIAALINSGINKEVSKLPNTPVELSSIQLR 226
I + + +RSV+GR + +R+EI + + + +++ V++ +++
Sbjct: 103 YIMAITQLAQTTLRSVIGRMELDKTFEERDEINSTVVAALDEAAGA---WGVKVLRYEIK 159
Query: 227 EIVLPAKIKEQIEKVQIARQESERVKYEVERSKQEAQKQAALAKGEADANRIKAQGVADA 286
++V P +I ++ QI + +R + + S+ +Q LA G+ +A +++G A A
Sbjct: 160 DLVPPQEILRSMQ-AQITAEREKRAR--IAESEGRKIEQINLASGQREAEIQQSEGEAQA 216
Query: 287 IVIEAKAKSQANLSISQSLSDKLLRLRQIEVQG--QFNEALKTNNNA 331
V + A+ A ++ ++ ++ L + + + Q AL+T A
Sbjct: 217 AVNASNAEKIARINRAKGEAESLRLVAEANAEAIRQIAAALQTQGGA 263
>gb|AAF44771.1|AF235154_1 (AF235154) GNA1220 [Neisseria gonorrhoeae]
gb|AAF44772.1|AF235155_1 (AF235155) GNA1220 [Neisseria gonorrhoeae]
gb|AAF44773.1|AF235156_1 (AF235156) GNA1220 [Neisseria gonorrhoeae]
Length = 315
Score = 53.5 bits (127), Expect = 4e-06
Identities = 61/287 (21%), Positives = 124/287 (42%), Gaps = 30/287 (10%)
Query: 47 VIVLLGVIAFLAKPFEVISSGEIGIKITAGKYEPTPLQPGIHFFVPIIQDILIVDTRIRN 106
+I+L V F K F VI E+ + G++ L G++ +P I D + ++
Sbjct: 5 IILLAAVAVFGFKSFVVIPQQEVHVVERLGRFHRA-LTAGLNILIPFI-DRVAYRHSLKE 62
Query: 107 INFSRTEDMGVAGKNQGIFRNDAINVMDSRGLTVSIELTVQYRLNPQTTPQTIATYGLSW 166
I + + N +LTV + Q T +A+YG S
Sbjct: 63 IPLDVPSQVCITRDNT--------------------QLTVDGIIYFQVTDPKLASYGSSN 102
Query: 167 EQKIINPVVRDVVRSVVGRYPAEDLPIKRNEIAALINSGINKEVSKLPNTPVELSSIQLR 226
I + + +RSV+GR + +R+EI + + S +++ V++ +++
Sbjct: 103 YIMAITQLAQTTLRSVIGRMELDKTFEERDEINSTVVSALDEAAGA---WGVKVLRYEIK 159
Query: 227 EIVLPAKIKEQIEKVQIARQESERVKYEVERSKQEAQKQAALAKGEADANRIKAQGVADA 286
++V P +I ++ QI + +R + + S+ +Q LA G+ +A +++G A A
Sbjct: 160 DLVPPQEILRAMQ-AQITAEREKRAR--IAESEGRKIEQINLASGQREAEIQQSEGEAQA 216
Query: 287 IVIEAKAKSQANLSISQSLSDKLLRLRQIEVQG--QFNEALKTNNNA 331
V + A+ A ++ ++ ++ L + + + Q AL+T A
Sbjct: 217 AVNASNAEKIARINRAKGEAESLRLVAEANAEAIRQIAAALQTQGGA 263
>ref|XP_069253.1| (XM_069253) similar to prohibitin [Homo sapiens]
Length = 396
Score = 53.5 bits (127), Expect = 4e-06
Identities = 37/177 (20%), Positives = 92/177 (51%), Gaps = 9/177 (5%)
Query: 140 VSIELTVQYRLNPQTTPQTIATYGLSWEQKIINPVVRDVVRSVVGRYPAEDLPIKRNEIA 199
V+I L + +R P+ A G ++++++ ++ ++++SVV R+ A +L +R ++
Sbjct: 213 VNITLCILFRPVSSQLPRIFAITGEDYDERVLTSIMTEILKSVVARFDAGELITQRELVS 272
Query: 200 ALINSGINKEVSKLPNTPVELSSIQLREIVLPAKIKEQIEKVQIARQESERVKYEVERSK 259
++ + ++ + + L ++ + E +E Q+A+QE+ER + VE+++
Sbjct: 273 RQVSDDLTEQAAIFG---LILDNVSWTHLAFKKLFTEAVEAKQVAQQEAERARI-VEKAE 328
Query: 260 QEAQKQAALAKGEADANRIKAQGVADAIVIEAKAKSQ-ANLSISQSLSDKLLRLRQI 315
Q QK+ A+ E D+ +A+ +A+ + + + + L ++ ++ +L R I
Sbjct: 329 Q--QKKVAIISTEGDSK--EAELIANELATSGDSLMELSKLEAAEDIAHQLSGSRNI 381
>ref|NP_473293.1| (NC_000521) band 7-related protein [Plasmodium falciparum]
pir||T18493 hypothetical protein C0800w - malaria parasite (Plasmodium
falciparum)
emb|CAB11132.1| (Z98551) band 7-related protein [Plasmodium falciparum 3D7]
Length = 374
Score = 53.1 bits (126), Expect = 5e-06
Identities = 64/268 (23%), Positives = 117/268 (42%), Gaps = 43/268 (16%)
Query: 76 GKYEPTPLQPGIHFFVPIIQDILIVDTRIRNINFSRTEDMGVAGKNQGIFRNDAINVMDS 135
GKY T L GIHF +P I I V FS E+ + NQ D + +
Sbjct: 94 GKYNKT-LLAGIHFLIPFIDKIAYV--------FSLKEET-ITIPNQTAITKDNVTLNID 143
Query: 136 RGLTVSIELTVQYRLNPQTTPQTIATYGLSWEQKIINPVVRDVVRSVVGRYPAEDLPIKR 195
L + + NP + +Y + + + + +RS +G+ + ++R
Sbjct: 144 GVLYIKCD-------NPYNS-----SYAIEDAVFAVTQLAQVTMRSELGKLTLDATFLER 191
Query: 196 NEIAALINSGINKEVSKLPNTPVELSSIQLREIVLPAKIKEQIEKVQIA--RQESERVKY 253
+ + + IN+ N ++ ++R+I+LP IK +EK A R+ +E ++
Sbjct: 192 DNLNEKLVKAINESAK---NWGIKCMRYEIRDIILPVNIKNAMEKQAEAERRKRAEILQS 248
Query: 254 EVERSKQ------EAQKQAALAKGEADANRIKAQGVADAI-VIEAKAKS-QANLSISQSL 305
E ER + + +K +A+G++ A + KA A+AI +I K K +N +IS +
Sbjct: 249 EGERESEINIAIGKKRKSILIAEGQSFAIKAKADATAEAIEIISNKIKKLDSNNAISLLV 308
Query: 306 SDKLLRLRQIEVQGQFNEALKTNNNAQI 333
+++ + + F+ K NN I
Sbjct: 309 AEQYIDV--------FSNICKNNNTVII 328
>ref|NP_536400.1| (NC_003309) gp43 [Bacteriophage phiE125]
gb|AAL40317.1|AF447491_45 (AF447491) gp43 [Bacteriophage phiE125]
Length = 270
Score = 53.1 bits (126), Expect = 5e-06
Identities = 55/250 (22%), Positives = 113/250 (45%), Gaps = 24/250 (9%)
Query: 45 LIVIVLLGVIAFLAKPFEVISSGEIGIKITA-GKYEPTPLQ---PGIHFFVPIIQDILIV 100
L +I++L FLA + + +G +G+K+ G ++ PG +F P + D+ I
Sbjct: 4 LFLILILAPTMFLAAGCDNVPAGYVGVKVQRYGDDRGVNVEVKGPGRYFNGPNV-DMFIF 62
Query: 101 DTRIRNINFSRTEDMGVAGKNQGIFRNDAINVMDSRGLTVSIELTVQYRLNPQTTPQTIA 160
T F+++ AGK+ F + GL+V+ ++ V Y + + P+
Sbjct: 63 PT------FTQSYVWDKAGKSDESFTFQTVE-----GLSVNTDIGVSYAIPRENAPKVFQ 111
Query: 161 TYGLSWEQ---KIINPVVRDVVRSVVGRYPAEDLPIKRNEIAALINSGINKEV-SKLPNT 216
Y ++ + +VRD + ED+ + A + + EV +
Sbjct: 112 KYRRGVDEITGVYLRAIVRDALNLAGASMAVEDVYGRGK---AALQQRVEDEVKANAAKV 168
Query: 217 PVELSSIQ-LREIVLPAKIKEQIEKVQIARQESERVKYEVERSKQEAQKQAALAKGEADA 275
+ + + + ++ LP ++ I A Q +++ + E+ ++ +A KQ A+AKGEA+A
Sbjct: 169 GISVEKVYFVNQMRLPEQVMNSINGKIAATQIAQQKENELRAAEADAAKQVAIAKGEAEA 228
Query: 276 NRIKAQGVAD 285
+KA+ + +
Sbjct: 229 LEVKAKALRE 238
>gb|AAF42663.1|AF226514_1 (AF226514) membrane protein GNA1220 [Neisseria meningitidis]
gb|AAF42665.1|AF226516_1 (AF226516) membrane protein GNA1220 [Neisseria meningitidis]
gb|AAF42682.1|AF226534_1 (AF226534) membrane protein GNA1220 [Neisseria meningitidis]
Length = 315
Score = 52.8 bits (125), Expect = 6e-06
Identities = 60/287 (20%), Positives = 124/287 (42%), Gaps = 30/287 (10%)
Query: 47 VIVLLGVIAFLAKPFEVISSGEIGIKITAGKYEPTPLQPGIHFFVPIIQDILIVDTRIRN 106
+I+L V F K F VI E+ + G++ L G++ +P I D + ++
Sbjct: 5 IILLAAVAVFGFKSFVVIPQQEVHVVERLGRFHRA-LTAGLNILIPFI-DRVAYRHSLKE 62
Query: 107 INFSRTEDMGVAGKNQGIFRNDAINVMDSRGLTVSIELTVQYRLNPQTTPQTIATYGLSW 166
I + + N +LTV + Q T +A+YG S
Sbjct: 63 IPLDVPSQVCITRDNT--------------------QLTVDGIIYFQVTDPKLASYGSSN 102
Query: 167 EQKIINPVVRDVVRSVVGRYPAEDLPIKRNEIAALINSGINKEVSKLPNTPVELSSIQLR 226
I + + +RSV+GR + +R+EI + + + +++ V++ +++
Sbjct: 103 YIMAITQLAQTTLRSVIGRMELDKTFEERDEINSTVVAALDEAAGA---WGVKVLRYEIK 159
Query: 227 EIVLPAKIKEQIEKVQIARQESERVKYEVERSKQEAQKQAALAKGEADANRIKAQGVADA 286
++V P +I ++ QI + +R + + S+ +Q LA G+ +A +++G A A
Sbjct: 160 DLVPPQEILRSMQ-AQITAEREKRAR--IAESEGRKIEQINLASGQREAEIQQSEGEAQA 216
Query: 287 IVIEAKAKSQANLSISQSLSDKLLRLRQIEVQG--QFNEALKTNNNA 331
V + A+ A ++ ++ ++ L + + + Q AL+T A
Sbjct: 217 AVNASNAEKIARINRAKGEAESLRLVAEANAEAIRQIAAALQTQGGA 263
>ref|NP_660875.1| (NC_004061) HflC [Buchnera aphidicola str. Sg (Schizaphis
graminum)]
gb|AAM68086.1| (AE014128) HflC [Buchnera aphidicola str. Sg (Schizaphis graminum)]
Length = 307
Score = 52.4 bits (124), Expect = 8e-06
Identities = 55/275 (20%), Positives = 120/275 (43%), Gaps = 56/275 (20%)
Query: 42 LSVLIVIVLLGVIAFLAKPFEVISSGEIGIKITAGKYEPTPLQ------PGIHFFVPIIQ 95
++ +++ +L + + F ++ GE GI + GK Q PG+HF +P +
Sbjct: 1 MNKIVICILSFFLLIFSSSFFIVKEGERGIILQFGKVLRNNKQKTLVYTPGLHFKIPFFE 60
Query: 96 DILIVDTRIRNINFSRTEDMGVAGKNQGIFRNDAINVMDSRGLTVSIELTVQYRLNPQTT 155
++ I+D+RI ++ N A + + ++ +++R++ +
Sbjct: 61 NVKILDSRIHTMD------------------NQADRFVTKEKKDLIVDSYIKWRIS-DFS 101
Query: 156 PQTIATYGLSWEQK--IINPVVRDVVRSVVGRYPAEDLPI-KRNEIAALINSGINKEVSK 212
+AT G + Q ++ D +RS +GR +++ R + + +NK
Sbjct: 102 RYYLATGGGDFFQAEVLLKRKFSDRLRSEIGRLNVKEIVTDSRGRLTTDVLYSLNKGTIN 161
Query: 213 LPNTP-----------VELSSIQLREIVLPAKIKEQI------EKVQIAR-------QES 248
L +T +E+ +++++I LP ++ + I E+ +AR +++
Sbjct: 162 LDSTSLINVNSMNALGIEVVDVRIKQINLPLEVSDAIYNRMRAERESVARSQRSQGQEKA 221
Query: 249 ERVK----YEVERSKQEAQKQAALAKGEADANRIK 279
E+++ Y V EAQK+A + KG+ +A K
Sbjct: 222 EKLRATADYRVSLILAEAQKKALMIKGQGEAEVAK 256
>ref|XP_141875.1| (XM_141875) similar to PROHIBITIN (B-CELL RECEPTOR ASSOCIATED
PROTEIN 32) (BAP 32) [Mus musculus]
Length = 274
Score = 52.0 bits (123), Expect = 1e-05
Identities = 40/188 (21%), Positives = 87/188 (46%), Gaps = 26/188 (13%)
Query: 86 GIHFFVPIIQDILIVDTRIRNINFSRTEDMGVAGKNQGIFRNDAINVMDSRGL-TVSIEL 144
G HF +P +Q +I D R + D + + S+ L ++I L
Sbjct: 53 GTHFLIPWVQKPIIFDCPSRPL--------------------DVLVITGSKDLQNINITL 92
Query: 145 TVQYRLNPQTTPQTIATYGLSWEQKIINPVVRDVVRSVVGRYPAEDLPIKRNEIAALINS 204
+ + L P + G ++++++ ++ ++++S V ++ A +L +R ++ ++
Sbjct: 93 HILFLLVASQLPCIYTSIGEDYDERVLLSIITEILKSAVAQFNAGELITQRELVSRQVSH 152
Query: 205 GINKEVSKLPNTPVELSSIQLREIVLPAKIKEQIEKVQIARQESERVKYEVERSKQEAQK 264
+ + + + L ++ L K E +E Q+A QE+ER + VE+++Q QK
Sbjct: 153 DLTEREATFG---LILDAMSLTYQTFRKKFTEVVEAKQVAHQEAERARSVVEKAEQ--QK 207
Query: 265 QAALAKGE 272
+AA+ E
Sbjct: 208 KAAIISVE 215
>gb|AAM11314.1| (AY094961) SD03319p [Drosophila melanogaster]
Length = 369
Score = 51.6 bits (122), Expect = 1e-05
Identities = 65/272 (23%), Positives = 123/272 (44%), Gaps = 43/272 (15%)
Query: 83 LQPGIHFFVPIIQDILIVDTRIRNINFSRTEDMGVAGKNQGIFRNDAINVMDSRGLTVSI 142
L PG++ VP+ I V + +++ + Q +D + T+SI
Sbjct: 67 LDPGLNILVPVADKIKYVQS---------LKEIAIDVPKQSAITSDNV--------TLSI 109
Query: 143 ELTVQYRL-NPQTTPQTIATYGLSWEQKIINPVVRDVVRSVVGRYPAEDLPIKRNEIAAL 201
+ + R+ +P A+YG+ + I + + +RS +G+ + + +R +
Sbjct: 110 DGVLYLRIIDPYK-----ASYGVEDPEFAITQLAQTTMRSELGKMSMDKVFRERESLNVS 164
Query: 202 INSGINKEVSKLPNTPVELSSIQLREIVLPAKIKEQIE-KVQIARQ------ESERVKYE 254
I INK + ++R+I LP ++ E ++ +V+ R+ ESE V+ E
Sbjct: 165 IVDSINKASEAWG---IACLRYEIRDIRLPTRVHEAMQMQVEAERRKRAAILESEGVR-E 220
Query: 255 VERSKQEAQKQAALAKGEADANRI--KAQGVADAIVIEAKAKSQANLSISQSLSD----- 307
E + E ++++ + EA+ KA G A AI+ A A++++ L+I++SLS
Sbjct: 221 AEINIAEGKRKSRILASEAERQEHINKASGEAAAIIAVADARARSLLAIAKSLSHLDGQN 280
Query: 308 -KLLRLRQIEVQGQFNEALKTNNNAQIMLTPG 338
L L + + G F + KTNN + PG
Sbjct: 281 AASLTLAE-QYIGAFKKLAKTNNTMILPSNPG 311
>ref|NP_611853.1| (NM_138009) CG2970 gene product [Drosophila melanogaster]
gb|AAF47110.1| (AE003462) CG2970-PA [Drosophila melanogaster]
Length = 323
Score = 51.6 bits (122), Expect = 1e-05
Identities = 65/272 (23%), Positives = 123/272 (44%), Gaps = 43/272 (15%)
Query: 83 LQPGIHFFVPIIQDILIVDTRIRNINFSRTEDMGVAGKNQGIFRNDAINVMDSRGLTVSI 142
L PG++ VP+ I V + +++ + Q +D + T+SI
Sbjct: 21 LDPGLNILVPVADKIKYVQS---------LKEIAIDVPKQSAITSDNV--------TLSI 63
Query: 143 ELTVQYRL-NPQTTPQTIATYGLSWEQKIINPVVRDVVRSVVGRYPAEDLPIKRNEIAAL 201
+ + R+ +P A+YG+ + I + + +RS +G+ + + +R +
Sbjct: 64 DGVLYLRIIDPYK-----ASYGVEDPEFAITQLAQTTMRSELGKMSMDKVFRERESLNVS 118
Query: 202 INSGINKEVSKLPNTPVELSSIQLREIVLPAKIKEQIE-KVQIARQ------ESERVKYE 254
I INK + ++R+I LP ++ E ++ +V+ R+ ESE V+ E
Sbjct: 119 IVDSINKASEAWG---IACLRYEIRDIRLPTRVHEAMQMQVEAERRKRAAILESEGVR-E 174
Query: 255 VERSKQEAQKQAALAKGEADANRI--KAQGVADAIVIEAKAKSQANLSISQSLSD----- 307
E + E ++++ + EA+ KA G A AI+ A A++++ L+I++SLS
Sbjct: 175 AEINIAEGKRKSRILASEAERQEHINKASGEAAAIIAVADARARSLLAIAKSLSHLDGQN 234
Query: 308 -KLLRLRQIEVQGQFNEALKTNNNAQIMLTPG 338
L L + + G F + KTNN + PG
Sbjct: 235 AASLTLAE-QYIGAFKKLAKTNNTMILPSNPG 265
>ref|XP_111424.1| (XM_111424) similar to PROHIBITIN (B-CELL RECEPTOR ASSOCIATED
PROTEIN 32) (BAP 32) [Mus musculus]
ref|XP_138522.1| (XM_138522) similar to prohibitin [Mus musculus]
Length = 307
Score = 51.6 bits (122), Expect = 1e-05
Identities = 25/111 (22%), Positives = 64/111 (57%), Gaps = 5/111 (4%)
Query: 166 WEQKIINPVVRDVVRSVVGRYPAEDLPIKRNEIAALINSGINKEVSKLPNTPVELSSIQL 225
+++++++ + ++++SVV ++ A +L +R + ++ + ++ + + L + L
Sbjct: 166 YDEQVLSSITTEILKSVVAQFDAGELITQRELASRQVSDDLIEQAATFG---LILDDVSL 222
Query: 226 REIVLPAKIKEQIEKVQIARQESERVKYEVERSKQEAQKQAALAKGEADAN 276
+ + E +E Q+ +QE+ER ++ VE+++Q QK+AA+ E D+N
Sbjct: 223 THLTFGKEFTEAVEAKQVTQQEAERARFMVEKAEQ--QKKAAIISAEGDSN 271
>ref|NP_297742.1| (NC_002488) integral membrane protease [Xylella fastidiosa 9a5c]
pir||A82806 integral membrane proteinase XF0452 [imported] - Xylella fastidiosa
(strain 9a5c)
gb|AAF83262.1|AE003895_13 (AE003895) integral membrane protease [Xylella fastidiosa 9a5c]
Length = 379
Score = 51.2 bits (121), Expect = 2e-05
Identities = 65/327 (19%), Positives = 133/327 (39%), Gaps = 34/327 (10%)
Query: 26 NGGRFIPPSNSFNSKKLSVLIVIVLLGVIAFLA-KPFEVISSGEIGIKITAGKYEPTPLQ 84
NGG F + +++ VL+GV+ + ++I + G+ + G++ LQ
Sbjct: 29 NGGGFWKVPGPLKDLFDAGILIWVLIGVLLIVVFSSIQLIGEQQRGVVLRFGQFVRV-LQ 87
Query: 85 PGIHFFVPIIQDILIVDTRIRNINFSRTEDMGVAGKNQGIFRNDAINVMDSRGLTVSIEL 144
PG+ +P + ++ ++ GK + D N+ V++ L
Sbjct: 88 PGLSLKLP---------WPVESVYKVNATEIKTFGKQVPVLTRDE-NI-------VNVTL 130
Query: 145 TVQYRLNPQTTPQTIATYGLSWEQKIINPVVRDVVRSVVGRYPAEDLPIKRNEIAALINS 204
VQY++N + YG +++ + VR VGR + R ++
Sbjct: 131 NVQYQINDPH----LYLYGSRNANEVLVQAAQSAVREQVGRSDLNSVLNNRGPLSTASKE 186
Query: 205 GINKEVSKLPNTPVELSSIQLREIVLPAKIKEQIEKVQIARQESERVKYEVERSKQEAQK 264
+ + T + ++ + L + P ++K ++V A+Q ER+ ++ ++ A K
Sbjct: 187 RLQASLDAY-RTGLLVTGLTLPDARPPEEVKSAFDEVNGAQQVRERL---IDEAQAYAAK 242
Query: 265 QAALAKGEADANRIKAQGVADAIVIEAKAKS------QANLSISQSLSDKLLRLRQI-EV 317
A+G A +NR A+G A++ A+ + QA + ++ K L L I +V
Sbjct: 243 VVPEARGRAASNRTAAEGYKQAVIARAQGDADRFTLLQAQYKNAPEVTRKRLWLETIQQV 302
Query: 318 QGQFNEALKTNNNAQIMLTPGGAVPNI 344
Q + + + I + VP +
Sbjct: 303 LAQNRKVIGADGRQLIYVPIASDVPRL 329
>ref|NP_492517.1| (NM_060116) erythrocyte band 7 integral membrane protein like
[Caenorhabditis elegans]
pir||T21562 hypothetical protein F30A10.5 - Caenorhabditis elegans
emb|CAB03018.1| (Z81072) predicted using Genefinder~Similarity to Human erythrocyte
band 7 integral membrane protein (SW:BAN7_HUMAN),
contains similarity to Pfam domain: PF01145 (SPFH domain
/ Band 7 family), Score=170.0, E-value=1.3e-47, N=1~cDNA
EST yk543b6.3 comes >
Length = 334
Score = 50.4 bits (119), Expect = 3e-05
Identities = 54/238 (22%), Positives = 106/238 (43%), Gaps = 43/238 (18%)
Query: 83 LQPGIHFFVPIIQDILIVDTRIRNINFSRTEDMGVAGKNQGIFRNDAINVMDSRGLTVSI 142
L+PG++F +PII I V R AI + + +T+
Sbjct: 66 LEPGLNFLLPIIDKIKFVQN----------------------LREIAIEIPEQGAITID- 102
Query: 143 ELTVQYRLNPQTTPQTI-------ATYGLSWEQKIINPVVRDVVRSVVGRYPAEDLPIKR 195
VQ RL+ + A+YG+ + + + + +RS VG+ + + +R
Sbjct: 103 --NVQLRLDGVLYLRVFDPYKACDASYGVDDPEFAVTQLAQTTMRSEVGKINLDTVFKER 160
Query: 196 NEIAALINSGINKEVSKLPNTPVELSSIQLREIVLPAKIKEQIE-------KVQIARQES 248
+ I INK + ++ ++R++ +P+KI+E ++ K + A ES
Sbjct: 161 ELLNENIVFAINKASAP---WGIQCMRYEIRDMQMPSKIQEAMQMQVEAERKKRAAILES 217
Query: 249 ERVKYEVERSKQEAQKQAALAKGEADANRIK-AQGVADAIVIEAKAKSQANLSISQSL 305
E ++ + +K A LA A RI A+G A+A++++A+++++A I+ +L
Sbjct: 218 EGIREAAINRAEGDKKSAILASEAVQAERINVAKGEAEAVILKAESRAKAIERIALAL 275
>emb|CAB64584.1| (AL135941) hypothetical protein L391.07 [Leishmania major]
Length = 283
Score = 50.4 bits (119), Expect = 3e-05
Identities = 68/293 (23%), Positives = 123/293 (41%), Gaps = 33/293 (11%)
Query: 61 FEVISSGEIGIKITAGKYEPTPLQPGIHFFVPIIQDILIVDTRIRNINFSRTEDMGVAGK 120
F +S+ E+GI GK++ T PG VP ++ + V + I+ R E
Sbjct: 6 FGCVSTSEVGIIENCGKFDRT-ADPGCFCIVPCVESVRGVVSLKVAISTVRVETK----- 59
Query: 121 NQGIFRNDAINVMDSRGLTVSIELTVQYRLNPQTTPQTIATYGLSWEQKIINPVVRDVVR 180
R++A+ V+IE + Y++ + A Y S + I VVR
Sbjct: 60 ----TRDNAV---------VNIETRLHYKVIAECAED--AFYRFSNPSEQIASFAASVVR 104
Query: 181 SVVGRYPAEDLPIKRNEIAALINSGINKEVSKLPNTPVELSSIQLREIVLPAKIKEQIEK 240
V +Y ++L + +EI ++++ + + KL L S L I A +K I +
Sbjct: 105 GEVPKYTLDELFLMSDEIKKVVSAELTE---KLRGFGFSLESTLLTRIEPSASVKTAISQ 161
Query: 241 VQIARQESERVKYEVERSKQEAQKQAALAKGEADANRIKAQGVA-DAIVIEAKAKSQANL 299
QI ++E E +K A K A+ + + R+ G+A + I KS
Sbjct: 162 TQINAYRRTAAEHESELNKILAVK---AAEADYEEKRLSGVGLAQERQAIMKGLKSSIES 218
Query: 300 SISQSLSDKLLRLRQIEVQGQFNEALK---TNNNAQIMLTPG--GAVPNIWID 347
++ S + + + + Q+ +A+K + + +++L P GA PN D
Sbjct: 219 FVNAVPSMRAKDVMNLLLLNQYFDAMKEVGSGKSNKLILMPNTCGAAPNFMAD 271
>ref|NP_476607.1| (NM_057259) l(2)37Cc-P1; transcription unit No. 4 [Drosophila
melanogaster]
Length = 257
Score = 50.4 bits (119), Expect = 3e-05
Identities = 42/202 (20%), Positives = 88/202 (42%), Gaps = 43/202 (21%)
Query: 86 GIHFFVPIIQDILIVDTRIRNINFSRTEDMGVAGKNQGIFRNDAINVMDSRGL-TVSIEL 144
G HFF+P +Q +I D R S+ ++ V + S+ L V+I L
Sbjct: 53 GTHFFIPWVQRPIIFDIR------SQPRNVPV--------------ITGSKDLQNVNITL 92
Query: 145 TVQYRLNPQTTPQTIATYGLSWEQKIINPVVRDVVRSVVGRYPAEDLPIKRNEIAALINS 204
+ YR P P+ G ++++++ + ++V V +++L ++ + +
Sbjct: 93 RILYRPIPDQLPKIYTILGQDYDERVLPSIAPEMVSQRV----SQELTVRAKQFGFI--- 145
Query: 205 GINKEVSKLPNTPVELSSIQLREIVLPAKIKEQIEKVQIARQESERVKYEVERSKQEAQK 264
L I L + + +E Q+A+QE+E+ ++ VE+++Q+
Sbjct: 146 ---------------LDDISLTHLTFGREFTLAVEMKQVAQQEAEKARFVVEKAEQQKLA 190
Query: 265 QAALAKGEADANRIKAQGVADA 286
A+G+A+A + A+ +A
Sbjct: 191 SIISAEGDAEAAGLLAKSFGEA 212
>ref|NP_631283.1| (NC_003888) putative secreted protein [Streptomyces coelicolor
A3(2)]
emb|CAB94650.1| (AL359215) putative secreted protein [Streptomyces coelicolor
A3(2)]
Length = 343
Score = 49.7 bits (117), Expect = 5e-05
Identities = 61/284 (21%), Positives = 123/284 (42%), Gaps = 41/284 (14%)
Query: 49 VLLGVIAFLAKPFEVISSGEIGIKITA------GKYEPTPLQPGIHFFVPIIQDIL-IVD 101
++ GVI L F V+ + I + A G+Y T L+PG+ +P I + ++D
Sbjct: 9 LIAGVIVALLAVFTVVRAVRIVPQARARNVERLGRYHRT-LKPGLSVVIPYIDRVYPVID 67
Query: 102 TRIRNINFSRTEDMGVAGKNQGIFRNDAINVMDSRGLTVSIELTVQYRLNPQTTPQTIAT 161
R + ++F K Q + D L V I+ + + Q T A
Sbjct: 68 LREQVVSF----------KPQPVITED--------NLVVEIDTVLYF----QVTDPRAAF 105
Query: 162 YGLSWEQKIINPVVRDVVRSVVGRYPAEDLPIKRNEIAALINSGINKEVSKLPNTPVELS 221
Y ++ + + + +R+VVG E R+ I + + +++ K + ++
Sbjct: 106 YEIANFLQAVEQLTVTTLRNVVGSMDLEKTLTSRDTINSQLRGVLDEATGKWG---LRVN 162
Query: 222 SIQLREIVLPAKIKEQIEKVQIARQESERVKYEVERSKQEAQKQAALAKGEADANRIKAQ 281
++++ I P IK+ ++K A ++ E +Q Q A+G+ A ++A+
Sbjct: 163 RVEIKAIDPPQSIKDAMQKQMRAERDKRAAILGAEGQRQS---QILTAEGDKQAAVLRAE 219
Query: 282 GVADAIVIEAKAKSQANLSISQSL-----SDKLLRLRQIEVQGQ 320
G A +++A+ +S+A + Q++ KLL + ++V Q
Sbjct: 220 GNRTAEILKAEGQSRAIDEVFQAVHRNDPDPKLLAYQYLQVLPQ 263
>ref|NP_518266.1| (NC_003295) PUTATIVE TRANSMEMBRANE PROTEIN [Ralstonia solanacearum]
emb|CAD13673.1| (AL646057) PUTATIVE TRANSMEMBRANE PROTEIN [Ralstonia solanacearum]
Length = 302
Score = 49.7 bits (117), Expect = 5e-05
Identities = 53/271 (19%), Positives = 118/271 (42%), Gaps = 25/271 (9%)
Query: 39 SKKLSVLIVIVLLGVIAFLAKP------FEVISSGEIGIKITA---GKYEPTPLQPGIHF 89
+ KL + ++ ++ G + LA +++I G GIKI + G F
Sbjct: 6 ASKLPLKLLALVFGAVLALAVARTFLLTWQIIPPGYTGIKINRLVDRGITRENVVTGFVF 65
Query: 90 FVPIIQDILIVDTRIRNINFSRTEDMGVAGKNQGIFRNDAINVMDSRGLTVSIELTVQYR 149
+ P+ ++ T ++ + + T+D+ N+G N+ + + V++++ V Y+
Sbjct: 66 YNPVQTALIQYPTFVQRVIW--TQDV-----NEGHALNEELTFNTKDAVPVNVDVAVSYQ 118
Query: 150 LNPQTTPQTIATYGLSWEQKIINPVVRDVVRSVV----GRYPAEDL-PIKRNEIAALINS 204
L+ P + + +RD R+++ Y +D+ ++ E + +
Sbjct: 119 LDRDKVPDFYTNFRADRIDSFTHGYLRDTARNIIVAIGSEYSFDDVNGARKEEFVSRLTR 178
Query: 205 GINKEVSKLPNTPVELSSI-QLREIVLPAKIKEQIEKVQIARQESERVKYEVERSKQEAQ 263
++ + L + + + LR P + + + A Q++ R + EV ++ EA+
Sbjct: 179 ELDARLMPLGVSIKQFGIVGSLRP---PRALLDAVSAKTKAIQDAIRTENEVRSAQAEAK 235
Query: 264 KQAALAKGEADANRIKAQGVADAIVIEAKAK 294
K+ A+A+GEA AN A + D ++ + K
Sbjct: 236 KKVAIAEGEAAANHALASSLDDRLLAWERLK 266
>ref|NP_070249.1| (NC_000917) membrane protein [Archaeoglobus fulgidus]
sp|O28852|YE20_ARCFU Hypothetical protein AF1420
pir||C69427 membrane protein homolog - Archaeoglobus fulgidus
gb|AAB89829.1| (AE001006) membrane protein [Archaeoglobus fulgidus]
Length = 249
Score = 49.7 bits (117), Expect = 5e-05
Identities = 46/229 (20%), Positives = 106/229 (46%), Gaps = 39/229 (17%)
Query: 49 VLLGVIAFLAKPFEVISSGEIGIKITAGKYEPTPLQPGIHFFVPIIQDILIVDTRIRNIN 108
+L+ V+ FL ++ E G+ G+ PG+ F +PI++++++VD R +
Sbjct: 8 LLIVVVLFLLSAVRIVKEYERGVIFRLGRLVGAR-GPGLFFIIPILENMVVVDLRTVTYD 66
Query: 109 FSRTEDMGVAGKNQGIFRNDAINVMDSRGLTVSIELTVQYR-LNPQTTPQTIATYGLSWE 167
E V+ +TV + V YR ++P + Y +
Sbjct: 67 VPSQE------------------VVTKDNVTVKVNAVVYYRVVDPAKAVTEVFDYQYATA 108
Query: 168 QKIINPVVRDVVRSVVGRYPAEDLPIKRNEIAALINSGINKEVSKLPNTPVELSSIQLRE 227
Q + + +RS++G+ +++ +R+++ + I++E + ++++++++++
Sbjct: 109 Q-----LAQTTLRSIIGQAELDEVLSERDKLNVKLQQIIDEETNP---WGIKVTAVEIKD 160
Query: 228 IVLPAKIKEQIEKVQIARQESERVKYEVERSK---QEAQKQAALAKGEA 273
+ LP E++ ++ + E+ER + RSK E + QAA+ EA
Sbjct: 161 VELP----EEMRRIMAMQAEAERER----RSKIIRAEGEYQAAMKLREA 201
>ref|NP_438321.1| (NC_000907) hflK protein (hflK) [Haemophilus influenzae Rd]
sp|P44546|HFLK_HAEIN HflK protein
pir||A64051 probable integral membrane proteinase (EC 3.4.-.-) hflK -
Haemophilus influenzae (strain Rd KW20)
gb|AAC21822.1| (U32701) hflK protein (hflK) [Haemophilus influenzae Rd]
Length = 410
Score = 49.3 bits (116), Expect = 7e-05
Identities = 56/285 (19%), Positives = 111/285 (38%), Gaps = 40/285 (14%)
Query: 10 KKKNSQRETPTPNTPNNGGRFIPPSNSFNSKKLSVLIVIVLLGVIAFLAKPFEVISSGEI 69
KK + NTP + G+ IP + V +G I + F I E
Sbjct: 67 KKSGQNNGSSQGNTPFHFGKVIP--------------LAVAIGAIIWGVNGFYTIKEAER 112
Query: 70 GIKITAGKYEPTPLQPGIHFFVPIIQDILIVDTRIRNINFSRTEDMGVAGKNQGIFRNDA 129
G+ + G+ +QPG+++ + +L V N + +++ + QG
Sbjct: 113 GVVLRFGELHSI-VQPGLNWKPTFVDKVLPV-------NVEQVKEL----RTQGAMLTQD 160
Query: 130 INVMDSRGLTVSIELTVQYRLNPQTTPQTIATYGLSWEQKIINPVVRDVVRSVVGRYPAE 189
N+ V +E+TVQYR+ + ++ +N +R V+G
Sbjct: 161 ENM-------VKVEMTVQYRVQDPAK----YLFSVTNADDSLNQATDSALRYVIGHMSMN 209
Query: 190 DLPIKRNEIAALINSGINKEVSKLPNTPVELSSIQLREIVLPAKIKEQIEKVQIARQESE 249
D+ + E+ K + +E+ + + P ++K+ + A+++ +
Sbjct: 210 DILTTGRSVVRENTWKALNEIIKSYDMGLEVIDVNFQSARPPEEVKDAFDDAIKAQEDEQ 269
Query: 250 RVKYEVERSKQEAQKQAALAKGEADANRIKAQGVADAIVIEAKAK 294
R E E +E + +A+G+A +A D IV++AK +
Sbjct: 270 RFIREAEAYAREKEP---IARGDAQRILEEATAYKDRIVLDAKGE 311
>gb|AAF09169.1|AF065260_1 (AF065260) HflC homolog [Clostridium difficile]
Length = 320
Score = 49.3 bits (116), Expect = 7e-05
Identities = 59/281 (20%), Positives = 118/281 (40%), Gaps = 62/281 (22%)
Query: 44 VLIVIVLLGVIAFLAKPFEVISSGEIGIKITAGKYEPTPLQPGIHFFVPIIQDIL-IVDT 102
VL +++++ V+A VI ++GI + GK++ + G+HF +P + + ++D
Sbjct: 6 VLSIVLIVVVVAISLTCIRVIKQSKVGIIMRLGKFQKVA-ETGVHFLIPFLDKMAYVIDL 64
Query: 103 RIRNINFSRTEDMGVAGKNQGIFRNDAINVMDSRGLTVSIELTVQYRLNPQTTPQTIATY 162
R I+F V+ +T+ I+ V Y++ T +
Sbjct: 65 REIVIDFPPQP------------------VITKDNVTMQIDTVVYYKV----TDPVRYVF 102
Query: 163 GLSWEQKIINPVVRDVVRSVVGRYPAEDLPIKRNEIAALINSGINKEVSKLPNTP----- 217
++ I + +R+++G ++ L + NK K N P
Sbjct: 103 EIANPIAAIENLTATTLRNIIGELDLDE---------TLTSQRYNK--CKNENYPDEATD 151
Query: 218 ---VELSSIQLREIVLPAKIKEQIEKVQIARQESERVKYEVERSKQ------EAQKQAAL 268
++++ ++L+ I+ P I+ +EK A +E + E +K E +KQ+A+
Sbjct: 152 KWGIKVNRVELKNIMPPQDIQVAMEKQMRAERERREAILQAEGNKSAAILQAEGEKQSAI 211
Query: 269 -------------AKGEADANRIKAQGVADAIVIEAKAKSQ 296
A+GE ++ + A+G A+AI A AK+Q
Sbjct: 212 LTAEAKKEAMVRVAEGEKESAILVAEGEAEAIRQTAIAKAQ 252
>ref|NP_275835.1| (NC_000916) stomatin-like protein [Methanothermobacter
thermautotrophicus] [Methanothermobacter
thermautotrophicus str. Delta H]
sp|O26788|Y692_METTH Hypothetical protein MTH692
pir||C69192 stomatin-like protein - Methanobacterium thermoautotrophicum
(strain Delta H)
gb|AAB85197.1| (AE000848) stomatin-like protein [Methanothermobacter
thermautotrophicus str. Delta H]
Length = 318
Score = 48.9 bits (115), Expect = 9e-05
Identities = 59/269 (21%), Positives = 113/269 (41%), Gaps = 32/269 (11%)
Query: 42 LSVLIVIVLLGVIAFLAKPFEVISSGEIGIKITAGKYEPTPLQPGIHFFVPIIQDILIVD 101
L ++IV+VLL V+AF K +++ E G+ GKY+ T ++ G+ +P I+ I VD
Sbjct: 3 LELIIVLVLL-VLAF--KSLKILRPYEKGVVERLGKYQRT-VESGLVVIIPFIEAIKKVD 58
Query: 102 TRIRNINFSRTEDMGVAGKNQGIFRNDAINVMDSRGLTVSIELTVQYRLNPQTTPQTIAT 161
R + ++ E V+ V ++ + Y + A
Sbjct: 59 MREQVVDVPPQE------------------VITKDNTVVVVDCVIFY----EVVDPFNAV 96
Query: 162 YGLSWEQKIINPVVRDVVRSVVGRYPAEDLPIKRNEIAALINSGINKEVSKLPNTPVELS 221
Y + + I + + +R+++G + R I + +++ K V
Sbjct: 97 YNVVDFYQAITKLAQTNLRNIIGDLELDQTLTSREMINTQLREVLDEATDKWGTRVVR-- 154
Query: 222 SIQLREIVLPAKIKEQIEKVQIARQESERVKYEVERSKQEAQKQAALAKGEADANRIKAQ 281
++++ I P I E + K A + E E KQ K+A +G+ A ++A+
Sbjct: 155 -VEIQRIEPPGDIVEAMSKQMKAERMKRAAILEAEGYKQSEIKRA---EGDKQAAILEAE 210
Query: 282 GVADAIVIEAKAKSQANLSISQSLSDKLL 310
G A+AI A A ++I++ + +L
Sbjct: 211 GKAEAIKKVADANKYREIAIAEGQAKAIL 239
>ref|NP_404935.1| (NC_003143) putative SPFH domain protein [Yersinia pestis]
emb|CAC90171.1| (AJ414147) putative SPFH domain protein [Yersinia pestis]
Length = 308
Score = 48.9 bits (115), Expect = 9e-05
Identities = 59/311 (18%), Positives = 129/311 (40%), Gaps = 39/311 (12%)
Query: 45 LIVIVLLGVIAFLAKPFEVISSGEIGIKITAGKYEPTPLQPGIHFFVPIIQDILIVDTRI 104
L ++ L+ VI + + I+ + GI GK +PG+ F +PII ++ +
Sbjct: 18 LAILTLIAVICLMGSWY-TINESDRGIITKWGKVVAVA-EPGLGFKIPIITEVETISISN 75
Query: 105 RNINFSRTEDMGVAGKNQGIFRNDAINVMDSRGLTVSIELTVQYRLNPQTTPQTIATYGL 164
R+I + R + K+Q + +++ +++ P + YG
Sbjct: 76 RSIKYDRLK---AYSKDQQ---------------PAQMVVSIGFQVPPTSVEDLFVKYGS 117
Query: 165 --SWEQKIINPVVRDVVRSVVGRYPAEDLPIKRNEIAALINSGINKEVSKLPNTPVELSS 222
+ +++++ V V +V G+Y A R + + + + L + P+ ++S
Sbjct: 118 IQNMAERLVSRHVPTQVENVFGQYTAVSAVQNREDFVRRVTEELRRV---LKDEPLIINS 174
Query: 223 IQLREIVLPAKIKEQIEK-------VQIARQ--ESERVKYEVERSKQEAQKQAALAKGEA 273
+ + I + IE+ V+ R+ E+E++ ++ + Q ++ L+ +
Sbjct: 175 VNIENIDFTEGYEASIEERMKAEVNVEKTRKMLETEKINADIAIEQARGQSESQLSIAKI 234
Query: 274 DANRIKAQGVADAIVIEAKAKSQANLSISQSLSDKLLRLRQIEVQGQFNEALKTNNNAQI 333
A +IK G A+A I ++A +++ + L+Q + + A K N
Sbjct: 235 GAEKIKLMGAAEAENIRLMGAAEA-----EAIKLRADALKQNPLLVELITAEKWNGELPQ 289
Query: 334 MLTPGGAVPNI 344
+ P +VP I
Sbjct: 290 TMLPNSSVPFI 300
>ref|NP_558821.1| (NC_003364) conserved protein (band 7 homolog) [Pyrobaculum
aerophilum]
gb|AAL63003.1| (AE009783) conserved protein (band 7 homolog) [Pyrobaculum
aerophilum]
Length = 262
Score = 48.9 bits (115), Expect = 9e-05
Identities = 51/241 (21%), Positives = 101/241 (41%), Gaps = 31/241 (12%)
Query: 43 SVLIVIVLLGVIAFLAKPFEVISSGEIGIKITAGKYEPTPLQPGIHFFVPIIQDILIVDT 102
++L++ ++ ++ L+ +I + +K G+ + PG+ F +PII+ I+ D
Sbjct: 12 AILVLFAVIVLVVILSSAIRIIPEYQRAVKFRLGRVVGV-VGPGLVFIIPIIETIMRYDL 70
Query: 103 RIRNINFSRTEDMGVAGKNQGIFRNDAINVMDSRGLTVSIELTVQYRLNPQTTPQTIATY 162
RI ++ Q D + V + + + ++ L + +A Y
Sbjct: 71 RIEVVDVPA----------QRALTKDNVEVTIDAAIYLRVIDALKTALTVRNHVPAVAIY 120
Query: 163 GLSWEQKIINPVVRDVVRSVVGRYPAEDLPIKRNEIAALINSGINKEVSK--LPNTPVEL 220
S +R VVG + L R+EIA I S +++ V+ + T V +
Sbjct: 121 AAS------------TLRDVVGMVDLDTLLSHRDEIAKRIASIVDEHVTPWGIKVTAVAI 168
Query: 221 SSIQLREIVLPAKIKE------QIEKVQIARQESERVKYEVERSKQEAQKQAALAKGEAD 274
I+L E++L A + + K+ +A E E K +E +++ +Q A+ D
Sbjct: 169 KDIKLPEVLLRAMASQAEAERVRRAKITLASAEYEASKIYLEAAERYSQNPTAVQLRMID 228
Query: 275 A 275
A
Sbjct: 229 A 229
>ref|NP_279419.1| (NC_002607) bifunctional short chain isoprenyl diphosphate
synthase; Ids [Halobacterium sp. NRC-1]
gb|AAG18899.1| (AE004992) bifunctional short chain isoprenyl diphosphate synthase;
Ids [Halobacterium sp. NRC-1]
Length = 392
Score = 48.5 bits (114), Expect = 1e-04
Identities = 53/259 (20%), Positives = 111/259 (42%), Gaps = 40/259 (15%)
Query: 45 LIVIVLLGVIAFLAKPFEVISSGEIGIKITAGKYEPTPLQPGIHFFVPIIQDILIVDTRI 104
L+++VLL V+ + + +++ + E G+Y L+PGI+ P + D R
Sbjct: 33 LLLLVLLAVVVY--ETVQIVDAYEKQALTVFGEYRGL-LEPGINVIPPFVSRTYTFDMRT 89
Query: 105 RNINFSRTEDMGVAGKNQGIFRNDA--INVMDSRGLTVSIELTVQYRLNPQTTPQTIATY 162
+ I+ R E + N + + I V D++ + ++ Y+ QT
Sbjct: 90 QTIDVPRQE--AITRDNSPVTADAVVYIRVRDAKRAFLEVD---DYKTAVSNLAQT---- 140
Query: 163 GLSWEQKIINPVVRDVVRSVVGRYPAEDLPIKRNEIAALINSGINKEVSKLPNTPVELSS 222
+R+V+G +D KR EI + I + +++ + + + S
Sbjct: 141 ---------------TLRAVLGDMELDDTLNKRQEINSRIRTELDEPTDEWG---IRVES 182
Query: 223 IQLREIVLPAKIKEQIEKVQIARQESERVKYEVERSKQEA--------QKQAALAKGEAD 274
+++RE+ ++++ +E+ A + + E + +Q A Q A+GE
Sbjct: 183 VEVREVNPSQEVQQAMEQQTSAERRRRAMILEAQGERQSAIENAQGDKQSNIIRAQGEKQ 242
Query: 275 ANRIKAQGVADAIVIEAKA 293
+ ++AQG A + V+ AK+
Sbjct: 243 SQILEAQGDAISTVLRAKS 261
>ref|NP_038470.1| (NM_013442) stomatin (EPB72)-like 2; stomatin-like 2; stomatin-like
protein 2 [Homo sapiens]
gb|AAF09142.1|AF190167_1 (AF190167) membrane associated protein SLP-2 [Homo sapiens]
gb|AAF91466.1|AF282596_1 (AF282596) stomatin-like protein 2 [Homo sapiens]
gb|AAH02442.1|AAH02442 (BC002442) stomatin-like 2 [Homo sapiens]
gb|AAH03025.1|AAH03025 (BC003025) stomatin-like 2 [Homo sapiens]
dbj|BAB55091.1| (AK027405) unnamed protein product [Homo sapiens]
gb|AAH14990.1|AAH14990 (BC014990) stomatin-like 2 [Homo sapiens]
Length = 356
Score = 48.5 bits (114), Expect = 1e-04
Identities = 56/270 (20%), Positives = 116/270 (42%), Gaps = 39/270 (14%)
Query: 83 LQPGIHFFVPIIQDILIVDTRIRNINFSRTEDMGVAGKNQGIFRNDAINVMDSRGLTV-S 141
L+PG++ +P++ I V + + INV + +T+ +
Sbjct: 59 LEPGLNILIPVLDRIRYVQS----------------------LKEIVINVPEQSAVTLDN 96
Query: 142 IELTVQYRLNPQTTPQTIATYGLSWEQKIINPVVRDVVRSVVGRYPAEDLPIKRNEIAAL 201
+ L + L + A+YG+ + + + + +RS +G+ + + +R + A
Sbjct: 97 VTLQIDGVLYLRIMDPYKASYGVEDPEYAVTQLAQTTMRSELGKLSLDKVFRERESLNAS 156
Query: 202 INSGINKEVSKLPNTPVELSSIQLREIVLPAKIKEQIEKVQIARQESERVKYEVERSKQ- 260
I IN+ + ++++I +P ++KE ++ A + E E +++
Sbjct: 157 IVDAINQAADCWG---IRCLRYEIKDIHVPPRVKESMQMQVEAERRKRATVLESEGTRES 213
Query: 261 -----EAQKQAALAKGEAD-ANRI-KAQGVADAIVIEAKAKSQA----NLSISQSLSDKL 309
E +KQA + EA+ A +I +A G A A++ +AKAK++A +++Q D
Sbjct: 214 AINVAEGKKQAQILASEAEKAEQINQAAGEASAVLAKAKAKAEAIRILAAALTQHNGDAA 273
Query: 310 LRLRQIE-VQGQFNEALKTNNNAQIMLTPG 338
L E F++ K +N + PG
Sbjct: 274 ASLTVAEQYVSAFSKLAKDSNTILLPSNPG 303
>ref|NP_649445.1| (NM_141188) CG14644 gene product [Drosophila melanogaster]
gb|AAL90007.1| (AY089269) AT06885p [Drosophila melanogaster]
Length = 293
Score = 48.5 bits (114), Expect = 1e-04
Identities = 52/235 (22%), Positives = 98/235 (41%), Gaps = 42/235 (17%)
Query: 42 LSVLIVIVLLGVIAFLAKPFEVISSGEIGIKITAGKYEPTPLQ-PGIHFFVPIIQDILIV 100
LS++++++ L F V+S E + + G+ P P + PG+ F VP I D+ +V
Sbjct: 49 LSMILIVLCLPWSLFCC--LRVMSEYERAVILRLGRLRPKPPRGPGVIFLVPCIDDLAVV 106
Query: 101 DTRIRNINFSRTEDMGVAGKNQGIFRNDAINVMDSRGLTVSIELTVQYRLNPQTTPQTIA 160
D R R+ + R E I D + T+SI+ V Y + A
Sbjct: 107 DIRTRSFDLHRQE----------ILTRDMV--------TISIDGVVYYSIKSPFD----A 144
Query: 161 TYGLSWEQKIINPVVRDVVRSVVGRYPAEDLPIKRNEIAALINSGINKEVSKLPNTPVEL 220
+ ++ + +R+V G + DL + ++ I + + +
Sbjct: 145 MLQVYDPEEATEKLAMTTLRNVAGTHKLMDLLSSKEYLSNQIEGILYNSTEP---WGIRV 201
Query: 221 SSIQLREIVLPAKIKEQIEKVQIARQESERVKYEVERSKQEAQKQAALAKGEADA 275
++++EI +P +Q+++ QE+ R EA+ + A A+GE DA
Sbjct: 202 ERVEIKEIFMP----DQLKRALAVEQEAMR----------EAKAKVAAAQGERDA 242
>ref|NP_240371.1| (NC_002528) hflC protein [Buchnera sp. APS]
sp|P57630|HFLC_BUCAI HFLC protein
dbj|BAB13257.1| (AP001119) hflC protein [Buchnera sp. APS]
Length = 310
Score = 48.5 bits (114), Expect = 1e-04
Identities = 53/279 (18%), Positives = 120/279 (42%), Gaps = 47/279 (16%)
Query: 42 LSVLIVIVLLGVIAFLAKPFEVISSGEIGIKITAGKY------EPTPLQPGIHFFVPIIQ 95
++ +++ + L+ F ++ GE GI + GK + PG+HF P ++
Sbjct: 1 MNKILIFASSVLFLILSSSFFIVKEGERGIVLQFGKVLRNNELKTVVYNPGLHFKWPFLE 60
Query: 96 DILIVDTRIRNINFSRTEDMGVAGKNQGIFRNDAINVMDSRGLTVSIELTVQYRLNPQTT 155
+ ++D RI ++ N A + + ++ +++R+N +
Sbjct: 61 TVKMLDARIHTMD------------------NQADRFVTKEKKDLIVDSYIKWRIN-DFS 101
Query: 156 PQTIATYG--LSWEQKIINPVVRDVVRSVVGRYPAEDL------PIKRNEIAALINSGIN 207
+AT G + + ++ D +RS +GR +++ + + + +L +N
Sbjct: 102 RYYLATGGGDVFQAEVLLKRKFSDRLRSEIGRLNVKEIVTDSRGRLTTDVLNSLNKGSMN 161
Query: 208 KEVSKLPNT------PVELSSIQLREIVLPAKIKEQI------EKVQIARQESERVKYEV 255
E S L N + + +++++I LP ++ + I E+ +AR + + + +
Sbjct: 162 LEKSSLINVNSMNALGIHVVDVRIKQINLPVEVSDAIYNRMRAEREAVARSQRSQGQEKA 221
Query: 256 ERSKQEAQKQAALAKGEA--DANRIKAQGVADAIVIEAK 292
E+ + A + ++ EA +A IK QG A+ + AK
Sbjct: 222 EKLRASADYKVSIILSEARKEALIIKGQGEAEVTKLFAK 260
>gb|AAF29073.1|AF161458_1 (AF161458) HSPC108 [Homo sapiens]
Length = 342
Score = 48.1 bits (113), Expect = 2e-04
Identities = 56/270 (20%), Positives = 116/270 (42%), Gaps = 39/270 (14%)
Query: 83 LQPGIHFFVPIIQDILIVDTRIRNINFSRTEDMGVAGKNQGIFRNDAINVMDSRGLTV-S 141
L+PG++ +P++ I V + + INV + +T+ +
Sbjct: 45 LEPGLNILIPVLDRIRYVQS----------------------LKEIVINVPEQSAVTLDN 82
Query: 142 IELTVQYRLNPQTTPQTIATYGLSWEQKIINPVVRDVVRSVVGRYPAEDLPIKRNEIAAL 201
+ L + L + A+YG+ + + + + +RS +G+ + + +R + A
Sbjct: 83 VTLQIDGVLYLRIMDPYKASYGVEDPEYAVTQLAQTTMRSELGKLSLDKVFRERESLNAS 142
Query: 202 INSGINKEVSKLPNTPVELSSIQLREIVLPAKIKEQIEKVQIARQESERVKYEVERSKQ- 260
I IN+ + ++++I +P ++KE ++ A + E E +++
Sbjct: 143 IVDAINQAADCWG---IRCLRYEIKDIHVPPRVKESMQMQVEAERRKRPTVLESEGTRES 199
Query: 261 -----EAQKQAALAKGEAD-ANRI-KAQGVADAIVIEAKAKSQA----NLSISQSLSDKL 309
E +KQA + EA+ A +I +A G A A++ +AKAK++A +++Q D
Sbjct: 200 AINVAEGKKQAQILASEAEKAEQINQAAGEASAVLAKAKAKAEAIRILAAALTQHNGDAA 259
Query: 310 LRLRQIE-VQGQFNEALKTNNNAQIMLTPG 338
L E F++ K +N + PG
Sbjct: 260 ASLTVAEQYVSAFSKLAKDSNTILLPSNPG 289
>ref|NP_438320.1| (NC_000907) hflC protein (hflC) [Haemophilus influenzae Rd]
sp|P44545|HFLC_HAEIN HflC protein
pir||I64050 probable integral membrane proteinase hflC homolog - Haemophilus
influenzae (strain Rd KW20)
gb|AAC21821.1| (U32701) hflC protein (hflC) [Haemophilus influenzae Rd]
Length = 295
Score = 47.4 bits (111), Expect = 3e-04
Identities = 50/253 (19%), Positives = 107/253 (41%), Gaps = 34/253 (13%)
Query: 49 VLLGVIAFLAKPFEVISSGEIGIKITAGKYEPTP------LQPGIHFFVPIIQDILIVDT 102
V+ + A + V++ G GI + K + +PG+HF VP+I I ++D
Sbjct: 8 VIFVIAAVVYSSIVVVTEGTRGIMLRFNKVQRDADNKVVVYEPGLHFKVPLIDSIKVLDA 67
Query: 103 RIRNINFSRTEDMGVAGKNQGIFRNDAINVMDSRGLTVSIELTVQYRLNPQTTPQTIATY 162
RIR ++ S T + V K+ + ++ V+++++ T +T
Sbjct: 68 RIRTLDGSATRFVTVEKKD------------------LLVDSYVKWKISDFGRFYT-STG 108
Query: 163 GLSWEQ--KIINPVVRDVVRSVVGRYPAEDLPI-KRNEIAALINSGINKEVSKLPNTPVE 219
G + Q +++ V D +RS +G +D+ R E+ ++ +E
Sbjct: 109 GGDYAQAANLLSRKVNDRLRSEIGSRTIKDIVSGTRGELMEGAKKALSSGQDSTAELGIE 168
Query: 220 LSSIQLREIVLPAKIKEQI------EKVQIARQESERVKYEVERSKQEAQKQAALAKGEA 273
+ +++++I LP ++ I E+ +AR+ + K + + + ++ L A
Sbjct: 169 VIDVRVKQINLPDEVSSSIYQRMRAERDAVAREHRSQGKEKAAFIQADVDRKVTLILANA 228
Query: 274 DANRIKAQGVADA 286
+ + +G DA
Sbjct: 229 NKTAQELRGSGDA 241
>sp|P24156|L2CC_DROME L(2)37CC PROTEIN
pir||C25511 Cc protein - fruit fly (Drosophila melanogaster)
emb|CAA27810.1| (X04228) URF 3 (aa 1-203) [Drosophila melanogaster]
emb|CAA27807.1| (X04227) URF 3 [Drosophila melanogaster]
Length = 203
Score = 47.4 bits (111), Expect = 3e-04
Identities = 37/167 (22%), Positives = 73/167 (43%), Gaps = 28/167 (16%)
Query: 115 MGVAGKNQGIFRNDAINVMDSRGL----TVSIELTVQYRLNPQTTPQTIATYGLSWEQKI 170
MG A + R+ NV + G V+I L + YR P P+ G +++++
Sbjct: 1 MGAAAHHLRTIRSQPRNVPEITGSKDLQNVNITLRILYRPIPDQLPKIYTILGQDYDERV 60
Query: 171 INPVVRDVVRSVVGRYPAEDLPIKRNEIAALINSGINKEVSKLPNTPVELSSIQLREIVL 230
+ + ++V V +++L ++ + + L I L +
Sbjct: 61 LPSIAPEMVSQRV----SQELTVRAKQFGFI------------------LDDISLTHLTF 98
Query: 231 PAKIKEQIEKVQIARQESERVKYEVERSKQEAQKQAALAKGEADANR 277
+ +E Q+A+QE+E+ ++ VE+++Q QK A++ E DA R
Sbjct: 99 GREFTLAVEMKQVAQQEAEKARFVVEKAEQ--QKLASIISAEGDAER 143
>gb|AAH10152.1|AAH10152 (BC010152) stomatin-like 2 [Homo sapiens]
Length = 356
Score = 47.4 bits (111), Expect = 3e-04
Identities = 56/270 (20%), Positives = 115/270 (41%), Gaps = 39/270 (14%)
Query: 83 LQPGIHFFVPIIQDILIVDTRIRNINFSRTEDMGVAGKNQGIFRNDAINVMDSRGLTV-S 141
L+PG++ +P++ I V + + INV + +T+ +
Sbjct: 59 LEPGLNILIPVLDRIRYVQS----------------------LKEIVINVPEQSAVTLDN 96
Query: 142 IELTVQYRLNPQTTPQTIATYGLSWEQKIINPVVRDVVRSVVGRYPAEDLPIKRNEIAAL 201
+ L + L + A+YG+ + + + +RS +G+ + + +R + A
Sbjct: 97 VTLQIDGVLYLRIMDPYKASYGVEDPEYAVTQPAQTTMRSELGKLSLDKVFRERESLNAS 156
Query: 202 INSGINKEVSKLPNTPVELSSIQLREIVLPAKIKEQIEKVQIARQESERVKYEVERSKQ- 260
I IN+ + ++++I +P ++KE ++ A + E E +++
Sbjct: 157 IVDAINQAADCWG---IRCLRYEIKDIHVPPRVKESMQMQVEAERRKRATVLESEGTRES 213
Query: 261 -----EAQKQAALAKGEAD-ANRI-KAQGVADAIVIEAKAKSQA----NLSISQSLSDKL 309
E +KQA + EA+ A +I +A G A A++ +AKAK++A +++Q D
Sbjct: 214 AINVAEGKKQAQILASEAEKAEQINQAAGEASAVLAKAKAKAEAIRILAAALTQHNGDAA 273
Query: 310 LRLRQIE-VQGQFNEALKTNNNAQIMLTPG 338
L E F++ K +N + PG
Sbjct: 274 ASLTVAEQYVSAFSKLAKDSNTILLPSNPG 303
>ref|NP_245055.1| (NC_002663) HflC [Pasteurella multocida]
gb|AAK02202.1| (AE006047) HflC [Pasteurella multocida]
Length = 295
Score = 47.4 bits (111), Expect = 3e-04
Identities = 56/265 (21%), Positives = 109/265 (41%), Gaps = 36/265 (13%)
Query: 49 VLLGVIAFLAKPFEVISSGEIGIKITAGKY------EPTPLQPGIHFFVPIIQDILIVDT 102
V++ + A L ++S G GI + K + PG+HF +P I I I+D
Sbjct: 8 VIVVIAAILYSSIVIVSEGTRGIMLRFSKVHRDADNKVVVYNPGLHFKIPFIDSIKILDA 67
Query: 103 RIRNINFSRTEDMGVAGKNQGIFRNDAINVMDSRGLTVSIELTVQYRLNPQTTPQTIATY 162
RIR ++ G A + + + D + ++ V++R++ T AT
Sbjct: 68 RIRTLD-------GQADRFVTVEKKDLL-----------VDSYVKWRISDFGRFYT-ATG 108
Query: 163 GLSWEQ--KIINPVVRDVVRSVVGRYPAEDLPI-KRNEIAALINSGINKEVSKLPNTPVE 219
G + Q ++ V D +RS G +D+ R E+ +N +E
Sbjct: 109 GGDYAQASNLLRRKVNDRLRSETGSRTIKDIVSGTRGELMEGARKALNTGPDSTAELGIE 168
Query: 220 LSSIQLREIVLPAKIKEQI------EKVQIARQESERVKYEVERSKQEAQKQAA--LAKG 271
+ +++++I LP ++ I E+ +AR+ + + + + + ++ LA
Sbjct: 169 VVDVRVKQINLPDEVSSSIYQRMRAERDAVAREHRSQGREKAAFIQADVDRKVTLILANA 228
Query: 272 EADANRIKAQGVADAIVIEAKAKSQ 296
A ++ G A A + + A SQ
Sbjct: 229 NRTAQELRGSGDATAAKVFSDAFSQ 253
>gb|AAM63205.1| (AY085995) stomatin-like protein [Arabidopsis thaliana]
Length = 401
Score = 47.0 bits (110), Expect = 3e-04
Identities = 57/245 (23%), Positives = 110/245 (44%), Gaps = 43/245 (17%)
Query: 76 GKYEPTPLQPGIHFFVPIIQDILIVDTRIRNINFSRTEDMGVAGKNQGIFRNDAINVMDS 135
GK+ T L GIHF VP + RI ++ + E + + NQ D +++
Sbjct: 121 GKFHTT-LPAGIHFLVPFVD-------RIAYVHSLKEEAIPIG--NQTAITKDNVSIHID 170
Query: 136 RGLTVSIELTVQYRLNPQTTPQTIATYGLSWEQKIINPVVRDVVRSVVGRYPAEDLPIKR 195
L V I ++P+ +A+YG+ + + + +RS +G+ + +R
Sbjct: 171 GFLYVKI-------VDPK-----LASYGVENPIYAVMQLAQTTMRSELGKITLDKTFEER 218
Query: 196 NEIAALINSGINKEVSKLPNTPVELSSIQLREIVLPAKIK---------EQIEKVQIARQ 246
+ + I IN + ++ S ++R+I+ P ++ E+ ++ QI
Sbjct: 219 DTLNEKIVEAINVAAK---DWGLQCLSYEIRDIMPPNGVRVAMEMQAEAERKKRAQILES 275
Query: 247 ESERVKYEVERSKQEAQKQAALAKGEA----DANRIKAQGVADAIVIEAKAKSQANLSIS 302
E ER + ++ + +K + + + EA NR AQG A+AI+ A+A ++ +S
Sbjct: 276 EGER---QAHINRADGKKSSVILESEAAMMDQVNR--AQGEAEAILARAQATAKGLAMVS 330
Query: 303 QSLSD 307
QSL +
Sbjct: 331 QSLKE 335
>ref|NP_245054.1| (NC_002663) HflK [Pasteurella multocida]
gb|AAK02201.1| (AE006047) HflK [Pasteurella multocida]
Length = 419
Score = 47.0 bits (110), Expect = 3e-04
Identities = 56/304 (18%), Positives = 124/304 (40%), Gaps = 44/304 (14%)
Query: 6 NEHLKKKNSQRETPTP------------NTPNNGGRFIPPSNSFNSKKLSV---LIVIVL 50
N+ +K+N+Q ++P NGG+ +NS + L++ L + +
Sbjct: 40 NQSGRKQNNQEQSPPDIEEIFNNLLKKLGGSGNGGK---RNNSHSGGSLNLGKLLPIAAV 96
Query: 51 LGVIAFLAKPFEVISSGEIGIKITAGKYEPTPLQPGIHFFVPIIQDILIVDTRIRNINFS 110
+G I + F + E G+ + G+ +QPG+++ I R+ +N
Sbjct: 97 IGAIVWGVSGFYTVKEAERGVVMRFGELHAI-VQPGLNWKPTFID-------RVIPVNVE 148
Query: 111 RTEDMGVAGKNQGIFRNDAINVMDSRGLTVSIELTVQYRLNPQTTPQTIATYGLSWEQKI 170
+ +++ + QG N+ V +E+TVQYR++ + ++
Sbjct: 149 QVKEL----RTQGSMLTQDENM-------VKVEMTVQYRVHDPAK----YLFSVTNADDS 193
Query: 171 INPVVRDVVRSVVGRYPAEDLPIKRNEIAALINSGINKEVSKLPNTPVELSSIQLREIVL 230
+N +R V+G +D+ + + + N +E+ + +
Sbjct: 194 LNQATDSALRYVIGHMSMDDILTTGRSVVRENTWKTLNTIIEPYNMGLEVVDVNFQSARP 253
Query: 231 PAKIKEQIEKVQIARQESERVKYEVERSKQEAQKQAALAKGEADANRIKAQGVADAIVIE 290
P ++K+ + A+++ +R E E +E + +A+G+A +A D +V++
Sbjct: 254 PEEVKDAFDDAIKAQEDEQRYIREAEAYAREREP---IARGDAQRILEEATAYKDRVVLD 310
Query: 291 AKAK 294
AK +
Sbjct: 311 AKGE 314
>ref|NP_220711.1| (NC_000963) unknown [Rickettsia prowazekii]
pir||B71689 hypothetical protein RP328 - Rickettsia prowazekii
emb|CAA14788.1| (AJ235271) unknown [Rickettsia prowazekii]
Length = 311
Score = 47.0 bits (110), Expect = 3e-04
Identities = 58/272 (21%), Positives = 119/272 (43%), Gaps = 55/272 (20%)
Query: 43 SVLIVIVLLGVIAFLAKPFEVISSGEIGIKITAGKYEPTPLQPGIHFFVPIIQDILIVDT 102
S++ ++V++ ++ +V+ + + GK++ LQPG++ +PIIQ + T
Sbjct: 9 SIITILVIIQMV-------KVVPQQQAWVVEKLGKFDKV-LQPGLNLLIPIIQRVAYKHT 60
Query: 103 RIRNINFSRTEDMGVAGKNQGIFRNDAINVMDSRGLTV-SIELTVQYRLNPQTTPQTIAT 161
+ +AI+V ++ ++ L++ L + A+
Sbjct: 61 ----------------------LKEEAIDVTAQTAISNDNVTLSIDGVLYVKIIDPMAAS 98
Query: 162 YGLSWEQKIINPVVRDVVRSVVGRYPAEDLPIKRNEIAALINSGINKEVSKLPNTPVELS 221
YG++ I + + +RS +G+ P + +R+ + I S IN+ N ++
Sbjct: 99 YGVNNPYYAITQLAQTTMRSEIGKLPLDRTFEERDTLNVAIVSAINQAAI---NWGIQCM 155
Query: 222 SIQLREIVLPAKIKEQIEKVQIARQESERVK-YEVERSKQ------EAQK---------- 264
++++I P I + +E +Q+A + +R + E E ++Q E +K
Sbjct: 156 RYEIKDIQPPQTILKAME-LQVAAERQKRAQILESEGNRQAKINHAEGEKAQIVLNSEAS 214
Query: 265 ---QAALAKGEADANRIKAQGVADAIVIEAKA 293
Q AKGEA+A + A A++I I A A
Sbjct: 215 YTDQVNRAKGEAEAIGLVATATANSIEIVAAA 246
>ref|NP_075720.1| (NM_023231) stomatin-like protein 2 [Mus musculus]
gb|AAG53404.1| (AF323178) stomatin-like protein 2 [Mus musculus]
gb|AAH03425.1|AAH03425 (BC003425) RIKEN cDNA 0610038F01 gene [Mus musculus]
Length = 353
Score = 46.6 bits (109), Expect = 4e-04
Identities = 47/224 (20%), Positives = 100/224 (43%), Gaps = 34/224 (15%)
Query: 83 LQPGIHFFVPIIQDILIVDTRIRNINFSRTEDMGVAGKNQGIFRNDAINVMDSRGLTV-S 141
L+PG++ +P++ I V + + INV + +T+ +
Sbjct: 59 LEPGLNVLIPVLDRIRYVQS----------------------LKEIVINVPEQSAVTLDN 96
Query: 142 IELTVQYRLNPQTTPQTIATYGLSWEQKIINPVVRDVVRSVVGRYPAEDLPIKRNEIAAL 201
+ L + L + A+YG+ + + + + +RS +G+ + + +R + A
Sbjct: 97 VTLQIDGVLYLRIMDPYKASYGVEDPEYAVTQLAQTTMRSELGKLSLDKVFRERESLNAN 156
Query: 202 INSGINKEVSKLPNTPVELSSIQLREIVLPAKIKEQIEKVQIARQESERVKYEVERSKQ- 260
I IN+ + ++++I +P ++KE ++ A + E E +++
Sbjct: 157 IVDAINQAADCWG---IRCLRYEIKDIHVPPRVKESMQMQVEAERRKRATVLESEGTRES 213
Query: 261 -----EAQKQAALAKGEAD-ANRI-KAQGVADAIVIEAKAKSQA 297
E +KQA + EA+ A +I +A G A A++ +AKAK++A
Sbjct: 214 AINVAEGKKQAQILASEAEKAEQINQAAGEASAVLAKAKAKAEA 257
>ref|NP_640072.1| (NC_003905) hypothetical transmembrane protein [Proteus vulgaris]
dbj|BAB93674.1| (AP004237) hypothetical transmembrane protein [Proteus vulgaris]
Length = 307
Score = 46.6 bits (109), Expect = 4e-04
Identities = 55/258 (21%), Positives = 115/258 (44%), Gaps = 47/258 (18%)
Query: 44 VLIVIVLLGVIAFLAKPFEVISSGEIGIKITAGKYEPTPLQPGIHFFVPIIQDILI-VDT 102
+ IVI+L V+ L K ++ G++ + G+Y L G++ +P + + + T
Sbjct: 6 IAIVIILAVVLLTLFKCVRIVPQGQLWLVERLGRYH-KQLNAGLNIVIPFVDSVAYRLST 64
Query: 103 RIRNINFSRTEDMGVAGKNQGIFRNDAI---NVMDSRGLTVSIELTVQYRLNPQTTPQTI 159
+ + + E V K+ + +AI V+D++ +E Y+L
Sbjct: 65 KDQIMKIPSQE---VISKDNAVLSVNAITYVKVVDAQKAAYGVE---NYQL--------- 109
Query: 160 ATYGLSWEQKIINPVVRDVVRSVVGRYPAEDLPIKRNEIAALINSGINKEVSKLPNTPVE 219
AT L+ +R+ +G+ ++ +R+EI A + +N ++ + +E
Sbjct: 110 ATVNLAMTS----------LRAAIGKLELDESLSQRDEIRAAL---LNSMADQMTDWGLE 156
Query: 220 LSSIQLREIVLPAKIKEQIEKVQIARQESERVKYEVERSKQEAQKQAALAKGEADANRIK 279
L SI++++I ++E +E+ A ER ++ + AA G A ++
Sbjct: 157 LRSIEIQDINPSESMQESMEEQAAA-----------ERKRKATETMAA---GNKRAAILE 202
Query: 280 AQGVADAIVIEAKAKSQA 297
A+GV ++ V+ A+A +A
Sbjct: 203 AEGVKESTVLRAQADKEA 220
>gb|AAC46209.1| (AF002133) MAV266 [Mycobacterium avium]
Length = 266
Score = 46.2 bits (108), Expect = 6e-04
Identities = 51/224 (22%), Positives = 94/224 (41%), Gaps = 29/224 (12%)
Query: 44 VLIVIVLLGVIAFLAKPFEVISSGEIGIKITAGKYEPTPLQPGIHFFVPIIQDILI-VDT 102
VL+ ++++ I +AK +I E + G+Y T + + VP I I VD
Sbjct: 9 VLLAVLVIFAIVVVAKSVALIPLAEAAVIERLGRYSRT-VSGSVTLLVPFIDRIRARVDL 67
Query: 103 RIRNINFSRTEDMGVAGKNQGIFRNDAINVMDSRGLTVSIELTVQYRLN-PQTTPQTIAT 161
R R ++F V+ LT++I+ V +++ PQ I+
Sbjct: 68 RERVVSFPPQP------------------VITEDNLTLNIDTVVYFQVTVPQAAVYEISN 109
Query: 162 YGLSWEQKIINPVVRDVVRSVVGRYPAEDLPIKRNEIAALINSGINKEVSKLPNTPVELS 221
Y + EQ + VR+VVG E R++I + +++ + + ++
Sbjct: 110 YIVGVEQ-----LTTTTVRNVVGGMTLEQTLTSRDQINGQLRGVLDEATGRWG---LRVA 161
Query: 222 SIQLREIVLPAKIKEQIEKVQIARQESERVKYEVERSKQEAQKQ 265
++LR I P I+ +EK A +E + E S++ A K+
Sbjct: 162 RVELRSIDPPPSIQASMEKQMKADREKRAMILTAEGSRESAIKE 205
>ref|NP_660876.1| (NC_004061) HflK [Buchnera aphidicola str. Sg (Schizaphis
graminum)]
gb|AAM68087.1| (AE014128) HflK [Buchnera aphidicola str. Sg (Schizaphis graminum)]
Length = 411
Score = 46.2 bits (108), Expect = 6e-04
Identities = 54/282 (19%), Positives = 106/282 (37%), Gaps = 43/282 (15%)
Query: 34 SNSFNSKKLSVLIVIVLLGVIAFLAKPFEVISSGEIGIKITAGKYEPTPLQPGIHFFVPI 93
S + + K++ ++I + + F I E G+ T GK+ + PG+++
Sbjct: 61 SQNLSKNKINPFLIIAFVSFFVWCFSGFYTIKEAERGVVTTFGKFSHL-VAPGLNWRPVF 119
Query: 94 IQDILIVDTRIRNINFSRTEDMGVAGKNQGIFRNDAINVMDSRGLTVSIELTVQYRLNPQ 153
I ++ + +N ++ +G ++ S V +E+ VQY++
Sbjct: 120 INEV-------KAVNVETVRELATSGV-----------MLTSDENVVRVEMNVQYKI--- 158
Query: 154 TTPQTIATYGLSWEQKIINPVVRDVVRSVVGRYPAEDLPIKRNEIAALINSGINKEVS-- 211
T + +++ + +R V+G ++ E LI S KE+
Sbjct: 159 -TDPADYLFSVAYPDDSLRQATDSALRGVIGH---SNMDRVLTEGRTLIRSDTQKEIEET 214
Query: 212 -KLPNTPVELSSIQLREIVLPAKIKEQIEKVQIARQESERVKYEVERSKQEAQKQAALAK 270
K + + + + P ++KE + AR+ E+ E E E Q
Sbjct: 215 IKPYKLGITILDVNFQTARPPEEVKEAFDDAIAARENREQYIREAEAYSNEVQP------ 268
Query: 271 GEADANRIKAQGVADAIVIEAKAKSQANLSISQSLSDKLLRL 312
KA G A I+ EAKA S + +Q + L++
Sbjct: 269 --------KAHGKAQRILEEAKAYSSRRILEAQGEVVRFLKI 302
>pir||T05863 hypothetical protein T29A15.70 - Arabidopsis thaliana
emb|CAB38270.1| (AL035602) putative protein [Arabidopsis thaliana]
emb|CAB81408.1| (AL161571) putative protein [Arabidopsis thaliana]
Length = 515
Score = 46.2 bits (108), Expect = 6e-04
Identities = 64/277 (23%), Positives = 116/277 (41%), Gaps = 39/277 (14%)
Query: 76 GKYEPTPLQPGIHFFVPIIQDILIVDTRIRNINFSRTEDMGVAGKNQGIFRNDAINVMDS 135
GKY T L GIHF +P + I V + ++ + NQ D +++
Sbjct: 78 GKYATT-LPSGIHFLIPFVDRIAYVHS---------LKEEAIPIPNQTAITKDNVSIHID 127
Query: 136 RGLTVSIELTVQYRLNPQTTPQTIATYGLSWEQKIINPVVRDVVRSVVGRYPAEDLPIKR 195
L V I ++P+ +A+YG+ + + + +RS +G+ + +R
Sbjct: 128 GVLYVKI-------VDPK-----LASYGVESPIYAVVQLAQTTMRSELGKITLDKTFEER 175
Query: 196 NEIAALINSGINKEVSKLPNTPVELSSIQLREIVLPAKIKEQIE---------KVQIARQ 246
+ + I IN + ++ ++R+I+ P ++ +E + QI
Sbjct: 176 DTLNEKIVEAINVAAK---DWGLQCLRYEIRDIMPPHGVRAAMEMQAEAERKKRAQILES 232
Query: 247 ESERVKY-EVERSKQEAQKQAALAKGEADANRIKAQGVADAIVIEAKAKSQANLSISQSL 305
E ER + + K+ + A+ A NR AQG A+AI+ A+A ++ + +SQSL
Sbjct: 233 EGERQSHINIADGKKSSVILASEAAKMDQVNR--AQGEAEAILARAQATAKGLVLLSQSL 290
Query: 306 SDK-LLRLRQIEVQGQFNEAL-KTNNNAQIMLTPGGA 340
+ + + V Q+ A IML P GA
Sbjct: 291 KETGGVEAASLRVAEQYITAFGNIAKEGTIMLLPSGA 327
>ref|NP_567778.1| (NM_118894) putative protein [Arabidopsis thaliana]
gb|AAK59431.1| (AY034924) unknown protein [Arabidopsis thaliana]
gb|AAL15215.1| (AY059109) unknown protein [Arabidopsis thaliana]
gb|AAM63260.1| (AY086050) stomatin-like protein [Arabidopsis thaliana]
Length = 411
Score = 46.2 bits (108), Expect = 6e-04
Identities = 64/277 (23%), Positives = 116/277 (41%), Gaps = 39/277 (14%)
Query: 76 GKYEPTPLQPGIHFFVPIIQDILIVDTRIRNINFSRTEDMGVAGKNQGIFRNDAINVMDS 135
GKY T L GIHF +P + I V + ++ + NQ D +++
Sbjct: 78 GKYATT-LPSGIHFLIPFVDRIAYVHS---------LKEEAIPIPNQTAITKDNVSIHID 127
Query: 136 RGLTVSIELTVQYRLNPQTTPQTIATYGLSWEQKIINPVVRDVVRSVVGRYPAEDLPIKR 195
L V I ++P+ +A+YG+ + + + +RS +G+ + +R
Sbjct: 128 GVLYVKI-------VDPK-----LASYGVESPIYAVVQLAQTTMRSELGKITLDKTFEER 175
Query: 196 NEIAALINSGINKEVSKLPNTPVELSSIQLREIVLPAKIKEQIE---------KVQIARQ 246
+ + I IN + ++ ++R+I+ P ++ +E + QI
Sbjct: 176 DTLNEKIVEAINVAAK---DWGLQCLRYEIRDIMPPHGVRAAMEMQAEAERKKRAQILES 232
Query: 247 ESERVKY-EVERSKQEAQKQAALAKGEADANRIKAQGVADAIVIEAKAKSQANLSISQSL 305
E ER + + K+ + A+ A NR AQG A+AI+ A+A ++ + +SQSL
Sbjct: 233 EGERQSHINIADGKKSSVILASEAAKMDQVNR--AQGEAEAILARAQATAKGLVLLSQSL 290
Query: 306 SDK-LLRLRQIEVQGQFNEAL-KTNNNAQIMLTPGGA 340
+ + + V Q+ A IML P GA
Sbjct: 291 KETGGVEAASLRVAEQYITAFGNIAKEGTIMLLPSGA 327
>pir||T02246 hypothetical protein P1.11659_4 - human
gb|AAC07983.1| (AC004472) P1.11659_4 [Homo sapiens]
Length = 357
Score = 45.8 bits (107), Expect = 8e-04
Identities = 60/284 (21%), Positives = 119/284 (41%), Gaps = 53/284 (18%)
Query: 83 LQPGIHFFVPIIQDILIVDTRIRNINFSRTEDMGVAGKNQGIFRNDAINVMDSRGLTV-S 141
L+PG++ +P++ I V + + INV + +T+ +
Sbjct: 46 LEPGLNILIPVLDRIRYVQS----------------------LKEIVINVPEQSAVTLDN 83
Query: 142 IELTVQYRLNPQTTPQTIATYGLSWEQKIINPVVRDVVRSVVGRYPAEDLPIKRNEIAAL 201
+ L + L + A+YG+ + + + + +RS +G+ + + +R + A
Sbjct: 84 VTLQIDGVLYLRIMDPYKASYGVEDPEYAVTQLAQTTMRSELGKLSLDKVFRERESLNAS 143
Query: 202 INSGINKEVSKLPNTPVELSSIQLREIVLPAKIKEQIEKVQIARQESE---RVKYEVERS 258
I IN+ + ++++I +P ++KE ++ A++ E R E ER
Sbjct: 144 IVDAINQAADCWG---IRCLRYEIKDIHVPPRVKESMQMQVGAKEGWEKGLRAPVEAERR 200
Query: 259 KQ-----------------EAQKQAALAKGEAD-ANRI-KAQGVADAIVIEAKAKSQA-- 297
K+ E +KQA + EA+ A +I +A G A A++ +AKAK++A
Sbjct: 201 KRATVLESEGTRESAINVAEGKKQAQILASEAEKAEQINQAAGEASAVLAKAKAKAEAIR 260
Query: 298 --NLSISQSLSDKLLRLRQIE-VQGQFNEALKTNNNAQIMLTPG 338
+++Q D L E F++ K +N + PG
Sbjct: 261 ILAAALTQHNGDAAASLTVAEQYVSAFSKLAKDSNTILLPSNPG 304
>ref|NP_455096.1| (NC_003198) putative membrane protein [Salmonella enterica subsp.
enterica serovar Typhi]
emb|CAD04986.1| (AL627267) putative membrane protein [Salmonella enterica subsp.
enterica serovar Typhi]
Length = 305
Score = 45.4 bits (106), Expect = 0.001
Identities = 71/336 (21%), Positives = 153/336 (45%), Gaps = 52/336 (15%)
Query: 44 VLIVIVLLGVIAFLAKPFEVISSGEIGIKITAGKYEPTPLQPGIHFFVPIIQDILIVDTR 103
+LI I++ + + +++ G G+Y T LQPG+ VP + I
Sbjct: 3 ILIPILIFVALVIVGAGVKIVPQGYQWTVERFGRYTKT-LQPGLSLVVPFMDRIG----- 56
Query: 104 IRNINFSRTEDMGVAGKNQGIFRNDAINVMDSRGLTVSIELTVQYRLNPQTTPQTIATYG 163
R IN + + +Q + D NV T+ +Q P+ A Y
Sbjct: 57 -RKINMM---EQVLDIPSQEVISKDNANV------TIDAVCFIQVIDAPR------AAYE 100
Query: 164 LS-WEQKIINPVVRDVVRSVVGRYPAEDLPIKRNEIAALINSGINKEVSKLPNTPVELSS 222
+S E IIN + ++ R+V+G +++ +R+ I A + +++ + ++++
Sbjct: 101 VSNLELAIINLTMTNI-RTVLGSMELDEMLSQRDSINARLLHIVDEATNPWG---IKVTR 156
Query: 223 IQLREIVLPAKIKEQIEKVQIARQESERVKYE-VERSKQEAQKQAALAKGEADANRIKAQ 281
I++R++ PA++ + A+ ++ER K + ++ Q + A+GE + +KA+
Sbjct: 157 IEIRDVRPPAELISSMN----AQMKAERTKRAYILEAEGVRQAEILKAEGEKQSQILKAE 212
Query: 282 GVADAIVIEAKAK-------SQANLSISQSLSDKLLRLRQIEVQGQFNEALK---TNNNA 331
G + ++A+A+ ++A +S++++ ++ V ++ EAL+ + NN+
Sbjct: 213 GERQSAFLQAEARERSAEAEARATQMVSEAIAAGDIQALNYFVAQKYTEALQQIGSANNS 272
Query: 332 QIMLTP------GGAVPNIWIDTKSKVKSSIAETKE 361
++++ P GA+ I VK S +E K+
Sbjct: 273 KVVMMPLDASSLMGAIAGI----SELVKDSASERKK 304
>dbj|BAB22363.1| (AK002793) data source:SPTR, source key:Q9UJZ1,
evidence:ISS~homolog to MEMBRANE ASSOCIATED PROTEIN
SLP-2 (STOMATIN-LIKE PROTEIN 2) (STOMATIN- LIKE
2)~putative [Mus musculus]
Length = 353
Score = 45.4 bits (106), Expect = 0.001
Identities = 47/224 (20%), Positives = 100/224 (43%), Gaps = 34/224 (15%)
Query: 83 LQPGIHFFVPIIQDILIVDTRIRNINFSRTEDMGVAGKNQGIFRNDAINVMDSRGLTV-S 141
L+PG++ +P++ I V + + INV + +T+ +
Sbjct: 59 LEPGLNVLIPVLDRIRYVQS----------------------LKEIVINVPEQSAVTLDN 96
Query: 142 IELTVQYRLNPQTTPQTIATYGLSWEQKIINPVVRDVVRSVVGRYPAEDLPIKRNEIAAL 201
+ L + L + A+YG+ + + + + +RS +G+ + + +R + A
Sbjct: 97 VTLQIDGVLYLRIMDPYKASYGVEDPEYAVTQLAQTTMRSELGKLSLDKVFREREFLNAN 156
Query: 202 INSGINKEVSKLPNTPVELSSIQLREIVLPAKIKEQIEKVQIARQESERVKYEVERSKQ- 260
I IN+ + ++++I +P ++KE ++ A + E E +++
Sbjct: 157 IVDAINQAADCWG---IRCLRYEIKDIHVPPRVKESMQMQVEAERRKRATVLESEGTRES 213
Query: 261 -----EAQKQAALAKGEAD-ANRI-KAQGVADAIVIEAKAKSQA 297
E +KQA + EA+ A +I +A G A A++ +AKAK++A
Sbjct: 214 AINVAEGKKQAQILASEAEKAEQINQAAGEASAVLAKAKAKAEA 257
>ref|NP_126340.1| (NC_000868) STOMATIN-LIKE PROTEIN [Pyrococcus abyssi]
sp|Q9V0Y1|YJ33_PYRAB Hypothetical protein PAB1933
pir||B75107 stomatin-like protein PAB1933 - Pyrococcus abyssi (strain Orsay)
emb|CAB49571.1| (AJ248285) STOMATIN-LIKE PROTEIN [Pyrococcus abyssi]
Length = 268
Score = 45.4 bits (106), Expect = 0.001
Identities = 47/240 (19%), Positives = 106/240 (43%), Gaps = 37/240 (15%)
Query: 31 IPPSNSFNSKKLSVLIVIVLLGVIAFLAKPFEVISSGEIGIKITAGKYEPTPLQPGIHFF 90
I P+N F + I+LL ++ FLA +++ E + G+ PG+ F
Sbjct: 2 ILPTNFF-------VTTIILLFILIFLASAIKIVKEYERAVIFRLGRVVGAR-GPGLFFI 53
Query: 91 VPIIQDILIVDTRIRNINFSRTEDMGVAGKNQGIFRNDAINVMDSRGLTVSIELTVQYR- 149
+PI + +IVD R + ++ E + + V + V +R
Sbjct: 54 IPIFEKAVIVDLRTQVLDVPVQE------------------TITKDNVPVRVNAVVYFRV 95
Query: 150 LNPQTTPQTIATYGLSWEQKIINPVVRDVVRSVVGRYPAEDLPIKRNEIAALINSGINKE 209
++P + Y ++ Q + + +RSV+G+ ++L +R+++ + I++
Sbjct: 96 VDPVKAVTQVKNYIMATSQ-----ISQTTLRSVIGQAHLDELLSERDKLNMQLQRIIDEA 150
Query: 210 VSKLPNTPVELSSIQLREIVLPAKIKEQIEK-VQIARQESERVKY-EVERSKQEAQKQAA 267
+++++++++++ LPA ++ + K + R+ R+ E ER E ++AA
Sbjct: 151 TDP---WGIKVTAVEIKDVELPAGMQRAMAKQAEAERERRARITLAEAERQAAEKLREAA 207
>gb|AAK16087.1|AF288082_5 (AF288082) YcaD [Photorhabdus luminescens]
Length = 306
Score = 45.1 bits (105), Expect = 0.001
Identities = 66/275 (24%), Positives = 131/275 (47%), Gaps = 44/275 (16%)
Query: 76 GKYEPTPLQPGIHFFVPIIQDILIVDTRIRNINFSRTEDMGVAGKNQGIFRNDAINVMDS 135
G+Y T L PG+H +P I I R IN + + +Q + D NV
Sbjct: 39 GRYTRT-LLPGLHIIIPFIDRIG------RKINMM---EQVLDIPSQEVISRDNANV--- 85
Query: 136 RGLTVSIELTVQYRLNPQTTPQTIATYGLSWEQKIINPVVRDVVRSVVGRYPAEDLPIKR 195
T+ +Q ++P ++ LS IIN + + R+V+G +++ +R
Sbjct: 86 ---TIDAVCFIQV-VDPVRAAYEVSNLELS----IINLTMTNF-RTVLGSMELDEMLSQR 136
Query: 196 NEIAALINSGINKEVSKLPNT-PVELSSIQLREIVLPAKIKEQIEKVQIARQESERVKYE 254
+ I NS + V + N V+++ I++R++ P KE I + A+ ++ER K
Sbjct: 137 DSI----NSRLLHIVDEATNPWGVKITRIEIRDVRPP---KELISAMN-AQMKAERTK-R 187
Query: 255 VERSKQEAQKQAAL--AKGEADANRIKAQGVADAIVIEAKAK-------SQANLSISQSL 305
+ + E +QAA+ A+GE + +KA+G + ++A+A+ ++A +S ++
Sbjct: 188 ADILEAEGIRQAAILKAEGEKQSQILKAEGERQSAFLQAEARERAAEAEARATKMVSDAI 247
Query: 306 SDKLLRLRQIEVQGQFNEALKT---NNNAQIMLTP 337
SD ++ V ++ +AL + + N+++++ P
Sbjct: 248 SDGNMQAINYFVAQKYTDALTSIGASGNSKVIMMP 282
>ref|NP_360089.1| (NC_003103) unknown [Rickettsia conorii]
gb|AAL02990.1| (AE008609) unknown [Rickettsia conorii]
Length = 312
Score = 45.1 bits (105), Expect = 0.001
Identities = 57/269 (21%), Positives = 116/269 (42%), Gaps = 50/269 (18%)
Query: 48 IVLLGVIAFLA--KPFEVISSGEIGIKITAGKYEPTPLQPGIHFFVPIIQDILIVDTRIR 105
+++ +IA L + +V+ + + GK++ LQPG++ +P+IQ + T
Sbjct: 5 LLIFSIIAILVIIQMVKVVPQQQAWVVEKLGKFDKV-LQPGLNLLIPVIQRVAYKHT--- 60
Query: 106 NINFSRTEDMGVAGKNQGIFRNDAINVMDSRGLTV-SIELTVQYRLNPQTTPQTIATYGL 164
+ +AI+V ++ ++ L++ L + A+YG+
Sbjct: 61 -------------------LKEEAIDVTAQTAISNDNVTLSIDGVLYVKIIDPMAASYGV 101
Query: 165 SWEQKIINPVVRDVVRSVVGRYPAEDLPIKRNEIAALINSGINKEVSKLPNTPVELSSIQ 224
+ I + + +RS +G+ P + +R + I + IN+ N ++ +
Sbjct: 102 NNPYYAITQLAQTTMRSEIGKLPLDRTFEERETLNVAIVAAINQAAI---NWGIQCMRYE 158
Query: 225 LREIVLPAKIKEQIEKVQIARQESERVK-YEVERSKQ------EAQK------------- 264
+++I P I + +E +Q+A + +R + E E ++Q E +K
Sbjct: 159 IKDIQPPQTILKAME-LQVAAERQKRAQILESEGNRQAKINHAEGEKAQIVLNSEASYTD 217
Query: 265 QAALAKGEADANRIKAQGVADAIVIEAKA 293
Q AKGEA+A + A A++I I A A
Sbjct: 218 QVNRAKGEAEAIGLVATATANSIEIVATA 246
>ref|NP_543057.1| (NC_003356) putative serine protease [Bacteriophage P27]
emb|CAC83523.1| (AJ298298) putative serine protease [Bacteriophage P27]
Length = 275
Score = 45.1 bits (105), Expect = 0.001
Identities = 42/167 (25%), Positives = 74/167 (44%), Gaps = 8/167 (4%)
Query: 135 SRGLTVSIELTVQYRLNPQTTPQTIATYGLSWEQKIINPVVRDVVRSVVGRYPAEDLPIK 194
S G T+ + V Y+++P TY + I + +R + + R ++ K
Sbjct: 79 SDGTTIGYHIGVAYKVDPSKVTTVFQTYRKGVDD-ITDTDLRQKIADALNRLASKMTTDK 137
Query: 195 -----RNEIAALINSGINKEVSKLPNTPVELSSIQLREIVLPAKIKEQIEKVQIARQESE 249
++E+ I E++ + + LS + E P + + I A Q++
Sbjct: 138 FIDGGKSELLDEALKDIQAEMTPIGIQVMSLSYVGKPEY--PPTVIDSINAKVTANQKTL 195
Query: 250 RVKYEVERSKQEAQKQAALAKGEADANRIKAQGVADAIVIEAKAKSQ 296
+ + EV++ + EA A A G+ADA R KAQ ADAI + +A Q
Sbjct: 196 QREQEVKQREAEANMLRAEAAGQADAIRTKAQAEADAIRLRGEALRQ 242
>ref|NP_200221.1| (NM_124790) putative protein [Arabidopsis thaliana]
dbj|BAA97132.1| (AB018115) contains similarity to stomatin like
protein~gene_id:MJP23.8 [Arabidopsis thaliana]
Length = 401
Score = 45.1 bits (105), Expect = 0.001
Identities = 56/245 (22%), Positives = 109/245 (43%), Gaps = 43/245 (17%)
Query: 76 GKYEPTPLQPGIHFFVPIIQDILIVDTRIRNINFSRTEDMGVAGKNQGIFRNDAINVMDS 135
GK+ T L GIHF VP + RI ++ + E + + NQ D +++
Sbjct: 121 GKFHTT-LPAGIHFLVPFVD-------RIAYVHSLKEEAIPIG--NQTAITKDNVSIHID 170
Query: 136 RGLTVSIELTVQYRLNPQTTPQTIATYGLSWEQKIINPVVRDVVRSVVGRYPAEDLPIKR 195
L V I ++P+ +A+YG+ + + + +RS +G+ + +R
Sbjct: 171 GVLYVKI-------VDPK-----LASYGVENPIYAVMQLAQTTMRSELGKITLDKTFEER 218
Query: 196 NEIAALINSGINKEVSKLPNTPVELSSIQLREIVLPAKIK---------EQIEKVQIARQ 246
+ + I IN + ++ ++R+I+ P ++ E+ ++ QI
Sbjct: 219 DTLNEKIVEAINVAAK---DWGLQCLRYEIRDIMPPNGVRVAMEMQAEAERKKRAQILES 275
Query: 247 ESERVKYEVERSKQEAQKQAALAKGEA----DANRIKAQGVADAIVIEAKAKSQANLSIS 302
E ER + ++ + +K + + + EA NR AQG A+AI+ A+A ++ +S
Sbjct: 276 EGER---QAHINRADGKKSSVILESEAAMMDQVNR--AQGEAEAILARAQATAKGLAMVS 330
Query: 303 QSLSD 307
QSL +
Sbjct: 331 QSLKE 335
>ref|NP_459496.1| (NC_003197) putative inner membrane protein [Salmonella typhimurium
LT2]
gb|AAL19455.1| (AE008719) putative inner membrane protein [Salmonella typhimurium
LT2]
Length = 305
Score = 44.7 bits (104), Expect = 0.002
Identities = 73/337 (21%), Positives = 153/337 (44%), Gaps = 54/337 (16%)
Query: 44 VLIVIVLLGVIAFLAKPFEVISSGEIGIKITAGKYEPTPLQPGIHFFVPIIQDILIVDTR 103
+LI I++ + + +++ G G+Y T LQPG+ VP + I
Sbjct: 3 ILIPILIFVALVIVGAGVKIVPQGYQWTVERFGRYTKT-LQPGLSLVVPFMDRIG----- 56
Query: 104 IRNINFSRTEDMGVAGKNQGIFRNDAINVMDSRGLTVSIELTVQYRLNPQTTPQTIATYG 163
R IN + + +Q + D NV T+ +Q P+ A Y
Sbjct: 57 -RKINMM---EQVLDIPSQEVISKDNANV------TIDAVCFIQVIDAPR------AAYE 100
Query: 164 LS-WEQKIINPVVRDVVRSVVGRYPAEDLPIKRNEIAALINSGINKEVSKLPNT-PVELS 221
+S E IIN + ++ R+V+G +++ +R+ I N+ + V + N ++++
Sbjct: 101 VSNLELAIINLTMTNI-RTVLGSMELDEMLSQRDSI----NTRLLHIVDEATNPWGIKVT 155
Query: 222 SIQLREIVLPAKIKEQIEKVQIARQESERVKYE-VERSKQEAQKQAALAKGEADANRIKA 280
I++R++ PA++ + A+ ++ER K + ++ Q + A+GE + +KA
Sbjct: 156 RIEIRDVRPPAELISSMN----AQMKAERTKRAYILEAEGVRQAEILKAEGEKQSQILKA 211
Query: 281 QGVADAIVIEAKAK-------SQANLSISQSLSDKLLRLRQIEVQGQFNEALK---TNNN 330
+G + ++A+A+ ++A +S++++ ++ V ++ EAL+ + NN
Sbjct: 212 EGERQSAFLQAEARERSAEAEARATQMVSEAIAAGDIQAINYFVAQKYTEALQQIGSANN 271
Query: 331 AQIMLTP------GGAVPNIWIDTKSKVKSSIAETKE 361
+++++ P GA+ I VK S +E K+
Sbjct: 272 SKVVMMPLDASSLMGAIAGI----SELVKDSASERKK 304
>ref|NP_143371.1| (NC_000961) erythrocyte band7 integral membrane protein [Pyrococcus
horikoshii]
sp|O59180|YF11_PYRHO Hypothetical protein PH1511
pir||C71027 probable erythrocyte band7 integral membrane protein - Pyrococcus
horikoshii
dbj|BAA30619.1| (AP000006) 266aa long hypothetical erythrocyte band7 integral
membrane protein [Pyrococcus horikoshii]
Length = 266
Score = 44.7 bits (104), Expect = 0.002
Identities = 43/223 (19%), Positives = 99/223 (44%), Gaps = 30/223 (13%)
Query: 48 IVLLGVIAFLAKPFEVISSGEIGIKITAGKYEPTPLQPGIHFFVPIIQDILIVDTRIRNI 107
I+LL ++ FLA +++ E + G+ PG+ F +PI + +IVD R + +
Sbjct: 12 IILLFILIFLASAIKIVKEYERAVIFRLGRVVGAR-GPGLFFIIPIFEKAVIVDLRTQVL 70
Query: 108 NFSRTEDMGVAGKNQGIFRNDAINVMDSRGLTVSIELTVQYR-LNPQTTPQTIATYGLSW 166
+ E + + V + V +R ++P + Y ++
Sbjct: 71 DVPVQE------------------TITKDNVPVRVNAVVYFRVVDPVKAVTQVKNYIMAT 112
Query: 167 EQKIINPVVRDVVRSVVGRYPAEDLPIKRNEIAALINSGINKEVSKLPNTPVELSSIQLR 226
Q + + +RSV+G+ ++L +R+++ + I++ +++++++++
Sbjct: 113 SQ-----ISQTTLRSVIGQAHLDELLSERDKLNMQLQRIIDEATDP---WGIKVTAVEIK 164
Query: 227 EIVLPAKI-KEQIEKVQIARQESERVKY-EVERSKQEAQKQAA 267
++ LPA + K + + R+ R+ E ER E ++AA
Sbjct: 165 DVELPAGMQKAMARQAEAERERRARITLAEAERQAAEKLREAA 207
>ref|NP_359801.1| (NC_003103) protease activity modulator HflK [Rickettsia conorii]
gb|AAL02702.1| (AE008583) protease activity modulator HflK [Rickettsia conorii]
Length = 346
Score = 44.7 bits (104), Expect = 0.002
Identities = 55/266 (20%), Positives = 111/266 (41%), Gaps = 18/266 (6%)
Query: 36 SFNSKKLSVLIVIVLLGVIAFLAKPFEVISSGEIGIKITAGKYEPTPLQPGIHFFVPIIQ 95
+FN+K + + +V V V +LA I GE I G++ PG+++ +P
Sbjct: 45 NFNAKTIILAVVAV---VALWLASGIYEIKEGEEAAVIRFGRFVRKGY-PGLNYHLPAPF 100
Query: 96 DILIVD----TRIRNINFSRTEDMGVAGKNQGIFRNDAINVMDSRGLTVSIELTVQYRLN 151
+ +IV+ +R I + + G N ++I + + +++ V + +N
Sbjct: 101 EKIIVEKVKQSRRIEIGYRTNSSLRSGGDNTKNIAGESIMLTGDENI-IALNCDVMWHIN 159
Query: 152 PQTTPQTIATYGLSWEQKIINPVVRDVVRSVVGRYPAE-DLPIKRNEIAALINSGINKEV 210
+ + + + V VR V+G P L ++ EI I K +
Sbjct: 160 NLED----FIFNVQRPAETVKATVESAVREVIGNTPISWVLSDQKQEITYKIEKLAQKIL 215
Query: 211 SKLPNTPVELSSIQLREIVLPAKIKEQIEKVQIARQESERVKYEVERSKQEAQKQAALAK 270
N V + +QL + PA++ + VQ ++ + E+ E+ +++ K A+
Sbjct: 216 DSY-NAGVMIEKVQLLKAEPPAEVIDAYRDVQTSKADKEK---EINQAQAYNNKILPEAR 271
Query: 271 GEADANRIKAQGVADAIVIEAKAKSQ 296
G A +A+G ++ +A+ SQ
Sbjct: 272 GAAAKIIQEAEGYRAEVISKAEGDSQ 297
>ref|NP_634057.1| (NC_003901) stomatin-like protein [Methanosarcina mazei Goe1]
gb|AAM31729.1| (AE013443) stomatin-like protein [Methanosarcina mazei Goe1]
Length = 260
Score = 44.7 bits (104), Expect = 0.002
Identities = 60/282 (21%), Positives = 124/282 (43%), Gaps = 50/282 (17%)
Query: 45 LIVIVLLGVIAFLAKPFEVISSGEIGIKITAGKYEPTPLQPGIHFFVPIIQDILIVDTRI 104
L + VL+ VI L++ ++++ E + G+ PGI +PII + +D R+
Sbjct: 8 LTLPVLIVVILILSQSIKMVNEYERVVIFRLGRLSGVK-GPGIFLIIPIIDKAIKIDLRV 66
Query: 105 RNINFSRTEDMGVAGKNQGIFRNDAINVMDSRGLTVSIELTVQYR-LNPQTTPQTIATYG 163
I+ + Q + D +TV ++ V Y+ + P + Y
Sbjct: 67 IAIDVPK----------QAVITRD--------NVTVEVDAVVYYKVVEPGAAITQVENYM 108
Query: 164 LSWEQKIINPVVRDVVRSVVGRYPAEDLPIKRNEIAALINSGINKEVSKLPNT-----PV 218
+ + + + +R V+G+ ++L +R INK++ +L + +
Sbjct: 109 FA-----TSTLSQTTLRDVLGQMELDELLSER--------ENINKQIQELLDAYTDPWGI 155
Query: 219 ELSSIQLREIVLPAKIKEQIEKVQIARQESER--VKYEVERSKQEAQKQAA-LAKGEADA 275
+++ + +R++ LP +K I K A +E + E E E K AA L +G A
Sbjct: 156 KVTGVTIRDVSLPETMKRAIAKQAEAEREKRARIILAEGEFQAAERMKDAATLYQGVPTA 215
Query: 276 NRIK-AQGVAD-------AIVIEAKAKSQANL-SISQSLSDK 308
+++ Q +A+ +V E+K+ N+ ++S+++S+K
Sbjct: 216 IKLRELQTLAEIAREKNLIVVTESKSPDTGNIAALSKAISEK 257
>ref|NP_286238.1| (NC_002655) putative protease [Escherichia coli O157:H7 EDL933]
ref|NP_308579.1| (NC_002695) putative protease [Escherichia coli O157:H7]
ref|NP_415022.1| (NC_000913) putative protease [Escherichia coli K12]
sp|P77367|YBBK_ECOLI Hypothetical protein ybbK
pir||H64779 probable membrane protein ybbK - Escherichia coli
gb|AAB40243.1| (U82664) similar to M. tuberculosis MTCY277.09 [Escherichia coli]
gb|AAC73591.1| (AE000155) putative protease [Escherichia coli K12]
gb|AAG54846.1|AE005230_6 (AE005230) putative protease [Escherichia coli O157:H7 EDL933]
dbj|BAB33975.1| (AP002552) putative protease [Escherichia coli O157:H7]
Length = 305
Score = 44.3 bits (103), Expect = 0.002
Identities = 64/307 (20%), Positives = 143/307 (45%), Gaps = 44/307 (14%)
Query: 44 VLIVIVLLGVIAFLAKPFEVISSGEIGIKITAGKYEPTPLQPGIHFFVPIIQDILIVDTR 103
+ I I++ + + +++ G G+Y T LQPG+ VP + I
Sbjct: 3 IFIPILIFVALVIVGAGVKIVPQGYQWTVERFGRYTKT-LQPGLSLVVPFMDRIG----- 56
Query: 104 IRNINFSRTEDMGVAGKNQGIFRNDAINVMDSRGLTVSIELTVQYRLNPQTTPQTIATYG 163
R IN + + +Q + D NV T+ +Q P+ A Y
Sbjct: 57 -RKINMM---EQVLDIPSQEVISKDNANV------TIDAVCFIQVIDAPR------AAYE 100
Query: 164 LS-WEQKIINPVVRDVVRSVVGRYPAEDLPIKRNEIAALINSGINKEVSKLPNT-PVELS 221
+S E IIN + ++ R+V+G +++ +R+ I NS + + V + N ++++
Sbjct: 101 VSNLELAIINLTMTNI-RTVLGSMELDEMLSQRDSI----NSRLLRIVDEATNPWGIKVT 155
Query: 222 SIQLREIVLPAKIKEQIEKVQIARQESERVKYE-VERSKQEAQKQAALAKGEADANRIKA 280
I++R++ PA++ + A+ ++ER K + ++ Q + A+GE + +KA
Sbjct: 156 RIEIRDVRPPAELISSMN----AQMKAERTKRAYILEAEGIRQAEILKAEGEKQSQILKA 211
Query: 281 QGVADAIVIEAKAK-------SQANLSISQSLSDKLLRLRQIEVQGQFNEALK---TNNN 330
+G + ++A+A+ ++A +S++++ ++ V ++ EAL+ +++N
Sbjct: 212 EGERQSAFLQAEARERSAEAEARATKMVSEAIASGDIQAVNYFVAQKYTEALQQIGSSSN 271
Query: 331 AQIMLTP 337
+++++ P
Sbjct: 272 SKVVMMP 278
>ref|NP_636425.1| (NC_003902) integral membrane protease subunit [Xanthomonas
campestris pv. campestris str. ATCC 33913]
gb|AAM40349.1| (AE012202) integral membrane protease subunit [Xanthomonas
campestris pv. campestris str. ATCC 33913]
Length = 380
Score = 44.3 bits (103), Expect = 0.002
Identities = 53/251 (21%), Positives = 102/251 (40%), Gaps = 44/251 (17%)
Query: 44 VLIVIVLLGVIAFLAKPFEVISSGEIGIKITAGKYEPTPLQPGIHFFVPIIQDILIVDTR 103
VLI +VL+ L F++I + G+ + G++ LQPG F +P +
Sbjct: 52 VLIAVVLM----VLFSSFQLIGEQQRGVVLRFGQFSRI-LQPGPSFKLPWPIE------S 100
Query: 104 IRNINFSRTEDMGVAGKNQGIFRNDAINVMDSRGLTVSIELTVQYRLNPQTTPQTIATYG 163
+R +N + + ++ + V+ V++ L VQY+++ +G
Sbjct: 101 VRKVNATEIKTF-----------SNQVPVLTRDENIVNVSLNVQYQISDPRK----YLFG 145
Query: 164 LSWEQKIINPVVRDVVRSVVGRYPAEDLPIKRNEIAALINSGINKEVSKLPNTPVELSSI 223
++ + VR VGR + R +A + ++ NT + ++ +
Sbjct: 146 SRNADLVLEQAAQSAVREQVGRSDLNTVLNNRGPLAIASKDRLQAALNAY-NTGLSVTGV 204
Query: 224 QLREIVLPAKIKEQIEKVQIARQESERVKYEVE-----------------RSKQEAQKQA 266
L + P ++K ++V A+Q ER+ E + R+ E KQA
Sbjct: 205 TLPDARPPEEVKPAFDEVNGAQQVRERLINEAQAYAAKVVPEARGQGARTRTGAEGYKQA 264
Query: 267 ALAKGEADANR 277
++K E DA+R
Sbjct: 265 VISKAEGDADR 275
>gb|AAF52157.1| (AE003607) CG14644 gene product [Drosophila melanogaster]
Length = 225
Score = 44.3 bits (103), Expect = 0.002
Identities = 47/213 (22%), Positives = 87/213 (40%), Gaps = 40/213 (18%)
Query: 64 ISSGEIGIKITAGKYEPTPLQ-PGIHFFVPIIQDILIVDTRIRNINFSRTEDMGVAGKNQ 122
+S E + + G+ P P + PG+ F VP I D+ +VD R R+ + R E
Sbjct: 1 MSEYERAVILRLGRLRPKPPRGPGVIFLVPCIDDLAVVDIRTRSFDLHRQE--------- 51
Query: 123 GIFRNDAINVMDSRGLTVSIELTVQYRLNPQTTPQTIATYGLSWEQKIINPVVRDVVRSV 182
I D + T+SI+ V Y + A + ++ + +R+V
Sbjct: 52 -ILTRDMV--------TISIDGVVYYSIKSPFD----AMLQVYDPEEATEKLAMTTLRNV 98
Query: 183 VGRYPAEDLPIKRNEIAALINSGINKEVSKLPNTPVELSSIQLREIVLPAKIKEQIEKVQ 242
G + DL + ++ I + + + ++++EI +P +Q+++
Sbjct: 99 AGTHKLMDLLSSKEYLSNQIEGILYNSTEP---WGIRVERVEIKEIFMP----DQLKRAL 151
Query: 243 IARQESERVKYEVERSKQEAQKQAALAKGEADA 275
QE+ R EA+ + A A+GE DA
Sbjct: 152 AVEQEAMR----------EAKAKVAAAQGERDA 174
>ref|NP_378205.1| (NC_003106) 260aa long hypothetical erythrocyte band 7 integral
membrane protein [Sulfolobus tokodaii]
dbj|BAB67314.1| (AP000989) 260aa long hypothetical erythrocyte band 7 integral
membrane protein [Sulfolobus tokodaii]
Length = 260
Score = 44.3 bits (103), Expect = 0.002
Identities = 62/319 (19%), Positives = 132/319 (40%), Gaps = 71/319 (22%)
Query: 46 IVIVLLGVIAFLAKPFEVISSGEIGIKITAGKYEPTPLQPGIHFFVPIIQDILIVDTRIR 105
+V +++ ++ FLA F +++ + + + G+ PGI F +P + L+VD RI
Sbjct: 10 LVFLVIIILIFLAMSFRIVTEWQRAVVLRLGRVLGVK-GPGIIFLIPFVDRPLLVDLRIV 68
Query: 106 NINFSRTEDMGVAGKNQGIFRNDAINVMDSRGLTVSIELTVQYR-LNPQTTPQTIATYGL 164
+ ++ +TV+I+ V Y+ ++P +++ Y
Sbjct: 69 TVEVPPQ------------------TIVTKDNVTVTIDAVVYYKVVDPLKAVISVSNYPA 110
Query: 165 SWEQKIINPVVRDVVRSVVGRYPAEDLPIKRNEIAALINSGINKEVSKLPNTPVELSSIQ 224
+ ++N + +R +VG+ +++ KR E IN+ + ++ +T E I+
Sbjct: 111 A----VLN-YAQTSLRDIVGQMELDEILTKREE--------INRRLQEILDTVTEGWGIK 157
Query: 225 LREIVLPAKIKEQIEKVQIARQESERVKYEVERSKQEAQKQA--ALAKGEADANRIKAQG 282
+ ++ V+ R E + E++K E ++A L++GE A I A+
Sbjct: 158 VTQVT-----------VRDIRLSPELLSAMAEQAKAERLRRAKIILSEGERQAANILAEA 206
Query: 283 VADAIVIEAKAKSQANLSISQSLSDKLLRLRQIEVQGQFNEALKTNNNAQIMLTPGGAVP 342
S+S + L+LR +E+ ++ +++ P G
Sbjct: 207 -----------------SLSYQNNPVALQLRFLEMLSDISQ-----RGNMVIVVPAG--- 241
Query: 343 NIWIDTKSKVKSSIAETKE 361
+ T S +K+ I TK+
Sbjct: 242 QEFYATLSTLKNVITSTKQ 260
>ref|NP_579263.1| (NC_003413) stomatin homolog [Pyrococcus furiosus DSM 3638]
gb|AAL81658.1| (AE010254) stomatin homolog [Pyrococcus furiosus DSM 3638]
Length = 269
Score = 43.9 bits (102), Expect = 0.003
Identities = 41/224 (18%), Positives = 98/224 (43%), Gaps = 28/224 (12%)
Query: 48 IVLLGVIAFLAKPFEVISSGEIGIKITAGKYEPTPLQPGIHFFVPIIQDILIVDTRIRNI 107
I+LL ++ FL+ +++ E + G+ PG+ F +PI + +IVD R + +
Sbjct: 12 IILLFILIFLSSAIKIVKEYERAVIFRLGRVVGAR-GPGLFFIIPIFEKAVIVDLRTQVL 70
Query: 108 NFSRTEDMGVAGKNQGIFRNDAINVMDSRGLTVSIELTVQYR-LNPQTTPQTIATYGLSW 166
+ E + + V + V +R ++P + Y ++
Sbjct: 71 DVPVQE------------------TITKDNVPVRVNAVVYFRVVDPVKAVTQVKNYIMAT 112
Query: 167 EQKIINPVVRDVVRSVVGRYPAEDLPIKRNEIAALINSGINKEVSKLPNTPVELSSIQLR 226
Q + + +RSV+G+ ++L +R+++ + I++ +++++++++
Sbjct: 113 SQ-----ISQTTLRSVIGQAHLDELLSERDKLNMQLQRIIDEATDP---WGIKVTAVEIK 164
Query: 227 EIVLPAKIKEQIEKVQIARQESERVKYEVERSKQEAQKQAALAK 270
++ LPA ++ + K A +E E +Q A+K A+
Sbjct: 165 DVELPAGMQRAMAKQAEAERERRARILLAEAERQAAEKLREAAR 208
>gb|AAF78287.1|AF099662_1 (AF099662) merozoite surface protein 3b [Plasmodium vivax]
Length = 697
Score = 43.5 bits (101), Expect = 0.004
Identities = 39/153 (25%), Positives = 76/153 (49%), Gaps = 8/153 (5%)
Query: 209 EVSKLPNTPVELSSIQLREIVLPAKIKEQIEKVQIARQESERVKYEVERSKQEAQKQAAL 268
E+ KL + V+ ++ + +++ L A+I E K Q+A+ E+E+ + + +K+ A K+
Sbjct: 173 ELQKLKDE-VDKAAKKAKQLQLKAEIAEHAVKAQVAKTEAEKAQKDATTAKEVAIKETGT 231
Query: 269 AKGEADANRIKAQGVADAIVIEAKAKSQANLSISQSLSDKLLRLRQIEVQGQFNEALKTN 328
+K E N KA +A E + K+QA SI+ +DK + Q EV+ + + K
Sbjct: 232 SKSE---NVTKAIDMAKK--EEEETKNQA--SIASENADKAAKAAQEEVKKEIKDENKEI 284
Query: 329 NNAQIMLTPGGAVPNIWIDTKSKVKSSIAETKE 361
+ + +T G + N + S + + K+
Sbjct: 285 SQLENEITKLGDILNTVKELASNAEDASKNAKK 317
>ref|NP_641491.1| (NC_003919) integral membrane protease subunit [Xanthomonas
axonopodis pv. citri str. 306]
gb|AAM36027.1| (AE011744) integral membrane protease subunit [Xanthomonas
axonopodis pv. citri str. 306]
Length = 375
Score = 43.5 bits (101), Expect = 0.004
Identities = 51/251 (20%), Positives = 102/251 (40%), Gaps = 44/251 (17%)
Query: 44 VLIVIVLLGVIAFLAKPFEVISSGEIGIKITAGKYEPTPLQPGIHFFVPIIQDILIVDTR 103
+L+ +VL+ L F++I + G+ + G++ LQPG +F +P +
Sbjct: 52 ILVAVVLM----VLFSSFQLIGEQQRGVVLRFGQFSRI-LQPGPNFKLPWPIE------S 100
Query: 104 IRNINFSRTEDMGVAGKNQGIFRNDAINVMDSRGLTVSIELTVQYRLNPQTTPQTIATYG 163
+R +N + + ++ + V+ V++ L VQY+++ +G
Sbjct: 101 VRKVNATEIKTF-----------SNQVPVLTRDENIVNVSLNVQYQISDPRK----YLFG 145
Query: 164 LSWEQKIINPVVRDVVRSVVGRYPAEDLPIKRNEIAALINSGINKEVSKLPNTPVELSSI 223
++ + VR VGR + R +A + + NT + ++ +
Sbjct: 146 SRNADLVLEQAAQSAVREQVGRSDLNTVLNNRGPLAIASKDRLQAALDAY-NTGLAVTGV 204
Query: 224 QLREIVLPAKIKEQIEKVQIARQESERVKYEVE-----------------RSKQEAQKQA 266
L + P ++K ++V A+Q ER+ E + R+ E KQA
Sbjct: 205 TLPDARPPEEVKPAFDEVNGAQQVRERLINEAQAYAAKVVPEARGQGARTRTGAEGYKQA 264
Query: 267 ALAKGEADANR 277
++K E DA+R
Sbjct: 265 TISKAEGDADR 275
>gb|AAM48627.1| (AE008920) SPFH domain / Band 7 family protein [uncultured
proteobacterium]
Length = 318
Score = 43.5 bits (101), Expect = 0.004
Identities = 56/269 (20%), Positives = 113/269 (41%), Gaps = 42/269 (15%)
Query: 38 NSKKLSVLIVIVLLGVIAFLAKPFEVISSGEIGIKITAGKYEPTPLQPGIHFFVPIIQDI 97
+S +++L+++VL+ + F + + GKY T L+ G++F P
Sbjct: 10 SSVAIAILLIVVLMKAVKF-------VPQNRAFVVERFGKYTRT-LEAGLNFLNPFFD-- 59
Query: 98 LIVDTRIRNINFSRTEDMGVAGKNQGIFRNDAINVMDSRGLTV-SIELTVQYRLNPQTTP 156
++++RT + A +V +T +I L V L +
Sbjct: 60 --------RVSYNRT------------LKEQAFDVPSQSAITRDNISLVVDGVLYLKVLD 99
Query: 157 QTIATYGLSWEQKIINPVVRDVVRSVVGRYPAEDLPIKRNEIAALINSGINKEVSKLPNT 216
A+YG+ + + + +RS +G+ + +R + I S IN+
Sbjct: 100 PYKASYGVDDYVWAVTQLAQTTMRSEIGKIELDKTFEEREALNNNIVSQINEAAGPWG-- 157
Query: 217 PVELSSIQLREIVLPAKIKEQIEKVQIARQESERVKYEVERSKQ------EAQKQAALAK 270
V + ++++I P + + +E+ A +E E E +Q E +K++ +
Sbjct: 158 -VMVLRYEIKDIEPPRTVLDAMERQMKAEREKRASILESEGERQSSINVAEGEKRSRVLA 216
Query: 271 GEADANR--IKAQGVADAIVIEAKAKSQA 297
EA+ +KA+G A+AI+ A AK++A
Sbjct: 217 AEAEKAEQILKAEGEANAIIAVANAKAEA 245
>ref|NP_406573.1| (NC_003143) conserved hypothetical protein [Yersinia pestis]
emb|CAC92325.1| (AJ414155) conserved hypothetical protein [Yersinia pestis]
Length = 304
Score = 42.7 bits (99), Expect = 0.006
Identities = 64/309 (20%), Positives = 145/309 (46%), Gaps = 48/309 (15%)
Query: 42 LSVLIVIVLLGVIAFLAKPFEVISSGEIGIKITAGKYEPTPLQPGIHFFVPIIQDILIVD 101
+ +LIV+ L+ V++ + +++ G G+Y T L PG++ VP + D
Sbjct: 5 IPILIVVALIVVLSAI----KIVPQGFQWTVERFGRYTKT-LMPGLNIVVPFM------D 53
Query: 102 TRIRNINFSRTEDMGVAGKNQGIFRNDAINVMDSRGLTVSIELTVQYRLNPQTTPQTIAT 161
R IN + + +Q I D NV + + ++P ++
Sbjct: 54 RVGRKINVM---EQVLDIPSQEIISRDNANVAIDAVCFIQV-------IDPVKAAYEVSN 103
Query: 162 YGLSWEQKIINPVVRDVVRSVVGRYPAEDLPIKRNEIAALINSGINKEVSKLPNT-PVEL 220
L+ I+N + + R+V+G +++ +R+ I NS + V + N +++
Sbjct: 104 LELA----IVNLTMTNF-RTVLGSMELDEMLSQRDNI----NSRLLHIVDEATNPWGIKI 154
Query: 221 SSIQLREIVLPAKIKEQIEKVQIARQESERVKYEVERSKQEAQKQAAL--AKGEADANRI 278
+ I++R++ P ++ + A+ ++ER K + + E +QAA+ A+GE + +
Sbjct: 155 TRIEIRDVRPPTELISAMN----AQMKAERTK-RADILEAEGVRQAAILRAEGEKQSQIL 209
Query: 279 KAQGVADAIVIEAKAK-------SQANLSISQSLSDKLLRLRQIEVQGQFNEALK---TN 328
KA+G + ++A+A+ +QA +S++++ ++ V ++ +AL+ +
Sbjct: 210 KAEGERQSAFLQAEARERAAEAEAQATKMVSEAIAAGDIQAINYFVAQKYTDALQHIGSA 269
Query: 329 NNAQIMLTP 337
NN+++++ P
Sbjct: 270 NNSKVIMMP 278
>ref|NP_295866.1| (NC_001263) conserved hypothetical protein [Deinococcus
radiodurans]
pir||D75311 conserved hypothetical protein - Deinococcus radiodurans (strain
R1)
gb|AAF11687.1|AE002048_7 (AE002048) conserved hypothetical protein [Deinococcus radiodurans]
Length = 344
Score = 42.7 bits (99), Expect = 0.006
Identities = 58/265 (21%), Positives = 119/265 (44%), Gaps = 45/265 (16%)
Query: 43 SVLIVIVLLGVIAFLAKPFEVISSGEIGIKITAGKYEPTPLQPGIHFFVPIIQDILIVDT 102
++ +V+++L VI L + + G + GK++ T L+PG++ +P I I
Sbjct: 4 TIFVVVLVLLVIITLLAGIKSVPQGNEWTQERFGKFQRT-LKPGLNLIIPYIDRIG---- 58
Query: 103 RIRNINFSRTEDMGVAGKNQGIFRNDAINVMDSRGLTVSIELTVQYRLNPQTTPQTIATY 162
R +N + +F + ++ V+++ V Y Q A+Y
Sbjct: 59 --RKVNMM-----------EQVFDVPSQEIITKDNALVTVDAVVFY----QVLDAAKASY 101
Query: 163 GL-SWEQKIINPVVRDVVRSVVGRYPAEDLPIKRNEIAALINSGINKEVSKLPNTPVELS 221
+ + EQ ++N + ++ R+V G ++L R+ I A + +++ V+++
Sbjct: 102 EVRNLEQAVLNLTMTNI-RTVTGSMDLDELLSNRDTINAKLLVVVDEATEPWG---VKVT 157
Query: 222 SIQLREIVLPAKIKEQIEKVQIARQESERVKYEVERSKQEAQKQAAL--AKGEADANRIK 279
I++++I PA + +ARQ K E +K+A + A+G A +K
Sbjct: 158 RIEVKDIKPPADLV-----ASMARQ-----------MKAEREKRANILDAEGFRQAAILK 201
Query: 280 AQGVADAIVIEAKAKSQANLSISQS 304
A G A V++A+ + QA+ S++
Sbjct: 202 ADGEKQAAVLKAEGEKQASFMESEA 226
>pir||T14692 hypothetical protein - Yersinia pestis plasmid pMT1
gb|AAC13207.1| (AF053947) unknown [Yersinia pestis]
Length = 261
Score = 42.4 bits (98), Expect = 0.008
Identities = 30/99 (30%), Positives = 53/99 (53%), Gaps = 1/99 (1%)
Query: 199 AALINSGINKEVSKLPNTPVELSSIQ-LREIVLPAKIKEQIEKVQIARQESERVKYEVER 257
A+L+++ + +++ +E+ S+ + + P + E I A Q++ + + EVE+
Sbjct: 130 ASLLDNALKDIQAEMSPVGIEVISLSWVGKPDYPDTVIESINAKVTANQKTLQRQQEVEQ 189
Query: 258 SKQEAQKQAALAKGEADANRIKAQGVADAIVIEAKAKSQ 296
K EA A+GEADA R +AQ ADAI + +A Q
Sbjct: 190 RKAEANMLREQAEGEADAIRKRAQAEADAIKLRGEALRQ 228
>ref|NP_395392.1| (NC_003134) putative lipoprotein [Yersinia pestis]
pir||T15029 probable serine proteinase - Yersinia pestis plasmid pMT1
gb|AAC82772.1| (AF074611) putative serine protease [Yersinia pestis]
emb|CAB55231.1| (AL117211) putative lipoprotein [Yersinia pestis]
Length = 276
Score = 42.4 bits (98), Expect = 0.008
Identities = 30/99 (30%), Positives = 53/99 (53%), Gaps = 1/99 (1%)
Query: 199 AALINSGINKEVSKLPNTPVELSSIQ-LREIVLPAKIKEQIEKVQIARQESERVKYEVER 257
A+L+++ + +++ +E+ S+ + + P + E I A Q++ + + EVE+
Sbjct: 145 ASLLDNALKDIQAEMSPVGIEVISLSWVGKPDYPDTVIESINAKVTANQKTLQRQQEVEQ 204
Query: 258 SKQEAQKQAALAKGEADANRIKAQGVADAIVIEAKAKSQ 296
K EA A+GEADA R +AQ ADAI + +A Q
Sbjct: 205 RKAEANMLREQAEGEADAIRKRAQAEADAIKLRGEALRQ 243
>gb|AAB63364.1| (U97360) HFLK homolog [Treponema pallidum]
Length = 220
Score = 42.4 bits (98), Expect = 0.008
Identities = 42/179 (23%), Positives = 86/179 (47%), Gaps = 10/179 (5%)
Query: 53 VIAFLAKPFEVISSGEIGIKITAGKYEPTPLQPGIHFFVPIIQDILIVD-TRIRNINFS- 110
VI +A P +IS + G+ GKY T L+PG+H+ +P ++ + V T+++ F
Sbjct: 25 VIVGIASPIRIISPTDNGVVTRFGKYHRT-LEPGLHYLIPFVEWVYKVPVTKVQKEEFGF 83
Query: 111 RTEDMGVAGKNQGIFRNDAINVMDSRGLTVSIELTVQYRL-NPQTTPQTIATYGLSWEQK 169
RT ++++ + + V +E VQYR+ +P+ + + ++
Sbjct: 84 RTSKSSEQSHYVNNISHESLMLTGDLNI-VDVEWVVQYRIVDPRAWVFNVES---QERRQ 139
Query: 170 IINPVVRDVVRSVVG-RYPAEDLPIKRNEIAALINSGINKEVSKLPNTPVELSSIQLRE 227
I + + VV S++G R + + +R+ I +N + ++ V +SS+QL++
Sbjct: 140 TIRDISKAVVNSLIGDRAILDIMGAERSAIQMRAKDMMNVLLKRI-GLGVLVSSVQLQK 197
Database: /home/scwang/download_20020708_db/nr
Posted date: Aug 7, 2002 12:55 PM
Number of letters in database: 324,149,939
Number of sequences in database: 1,026,957
Lambda K H
0.314 0.132 0.357
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 214,988,866
Number of Sequences: 1026957
Number of extensions: 8670643
Number of successful extensions: 27690
Number of sequences better than 1.0e-02: 152
Number of HSP's better than 0.0 without gapping: 32
Number of HSP's successfully gapped in prelim test: 121
Number of HSP's that attempted gapping in prelim test: 27490
Number of HSP's gapped (non-prelim): 183
length of query: 362
length of database: 324,149,939
effective HSP length: 122
effective length of query: 240
effective length of database: 198,861,185
effective search space: 47726684400
effective search space used: 47726684400
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 98 (42.4 bits)