BLASTP 2.2.1 [Apr-13-2001]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|15644897|ref|NP_207067.1| conserved hypothetical
ATP-binding protein [Helicobacter pylori 26695]
(437 letters)
Database: /home/scwang/download_20020708_db/nr
1,026,957 sequences; 324,149,939 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_207067.1| (NC_000915) conserved hypothetical ATP-bin... 868 0.0
ref|NP_222975.1| (NC_000921) putative [Helicobacter pylori ... 847 0.0
ref|NP_281645.1| (NC_002163) hypothetical protein Cj0458c [... 495 e-139
ref|NP_213198.1| (NC_000918) hypothetical protein [Aquifex ... 322 7e-87
ref|NP_389583.1| (NC_000964) similar to hypothetical protei... 297 1e-79
ref|NP_252669.1| (NC_002516) conserved hypothetical protein... 294 1e-78
ref|NP_562009.1| (NC_003366) conserved hypothetical protein... 293 2e-78
ref|NP_657738.1| (NC_003995) UPF0004, Uncharacterized prote... 291 1e-77
pir||S57900 conserved hypothetical protein 2 (hemL 3' regio... 290 2e-77
ref|NP_228462.1| (NC_000853) conserved hypothetical protein... 290 2e-77
ref|NP_371816.1| (NC_002758) conserved hypothetical protein... 288 1e-76
ref|NP_603372.1| (NC_003454) MIAB protein [Fusobacterium nu... 283 2e-75
ref|NP_348462.1| (NC_003030) Predicted Fe-S oxidoreductase,... 281 1e-74
ref|NP_601156.1| (NC_003450) COG0621:2-methylthioadenine sy... 281 1e-74
dbj|BAB99342.1| (AP005280) 2-methylthioadenine synthetase [... 281 1e-74
ref|NP_243238.1| (NC_002570) BH2372~unknown conserved prote... 280 3e-74
ref|NP_660758.1| (NC_004061) hypothetical 53.7 kD protein i... 280 3e-74
ref|NP_406146.1| (NC_003143) putative tRNA-thiotransferase ... 278 9e-74
ref|NP_629911.1| (NC_003888) conserved hypothetical protein... 277 2e-73
ref|NP_622974.1| (NC_003869) 2-methylthioadenine synthetase... 277 2e-73
ref|NP_384511.1| (NC_003047) CONSERVED HYPOTHETICAL PROTEIN... 276 4e-73
ref|NP_230609.1| (NC_002505) conserved hypothetical protein... 275 6e-73
ref|NP_240253.1| (NC_002528) hypothetical protein [Buchnera... 274 2e-72
ref|NP_353388.1| (NC_003062) AGR_C_623p [Agrobacterium tume... 273 2e-72
ref|NP_440473.1| (NC_000911) hypothetical protein [Synechoc... 273 2e-72
ref|NP_642776.1| (NC_003919) conserved hypothetical protein... 273 2e-72
ref|NP_531062.1| (NC_003304) miaB protein [Agrobacterium tu... 273 2e-72
ref|NP_217249.1| (NC_000962) hypothetical protein Rv2733c [... 273 3e-72
ref|NP_518652.1| (NC_003295) CONSERVED HYPOTHETICAL PROTEIN... 273 3e-72
ref|NP_298196.1| (NC_002488) conserved hypothetical protein... 272 6e-72
ref|NP_337308.1| (NC_002755) conserved hypothetical protein... 272 6e-72
ref|NP_637682.1| (NC_003902) conserved hypothetical protein... 271 8e-72
ref|NP_360883.1| (NC_003103) unknown [Rickettsia conorii] >... 271 1e-71
ref|NP_245938.1| (NC_002663) unknown [Pasteurella multocida... 270 2e-71
ref|NP_438192.1| (NC_000907) conserved hypothetical protein... 268 9e-71
ref|NP_283403.1| (NC_003116) hypothetical protein NMA0590 [... 267 2e-70
ref|NP_274862.1| (NC_003112) conserved hypothetical protein... 266 5e-70
ref|NP_485355.1| (NC_003272) hypothetical protein [Nostoc s... 263 2e-69
ref|NP_540893.1| (NC_003317) MIAB PROTEIN [Brucella meliten... 263 2e-69
ref|NP_308726.1| (NC_002695) hypothetical protein [Escheric... 261 9e-69
ref|NP_286386.1| (NC_002655) orf, hypothetical protein [Esc... 261 1e-68
ref|NP_455239.1| (NC_003198) MiaB protein (putative tRNA-th... 259 4e-68
ref|NP_301734.1| (NC_002677) conserved hypothetical protein... 259 4e-68
pir||S72937 hypothetical protein B2235_C2_195 - Mycobacteri... 259 4e-68
ref|NP_459662.1| (NC_003197) methylthiolation of isopenteny... 259 4e-68
ref|NP_106183.1| (NC_002678) hypothetical protein [Mesorhiz... 256 5e-67
ref|NP_221158.1| (NC_000963) unknown [Rickettsia prowazekii... 254 1e-66
gb|AAF60223.1|AF177477_1 (AF177477) CDK5 activator-binding ... 251 9e-66
ref|NP_219191.1| (NC_000919) conserved hypothetical protein... 251 9e-66
ref|NP_080152.1| (NM_025876) RIKEN cDNA 2310066P17 [Mus mus... 248 1e-64
emb|CAC15883.2| (AL355392) dJ1187J4.4 (CGI-05 protein (LOC5... 243 3e-63
ref|XP_015893.2| (XM_015893) similar to hypothetical protei... 243 3e-63
dbj|BAB14760.1| (AK023992) unnamed protein product [Homo sa... 241 9e-63
gb|EAA00300.1| (AAAB01008986) agCP9825 [Anopheles gambiae s... 237 2e-61
ref|NP_195357.1| (NM_119802) putative protein [Arabidopsis ... 236 5e-61
ref|NP_294874.1| (NC_001263) conserved hypothetical protein... 234 1e-60
ref|NP_662869.1| (NC_002932) conserved hypothetical protein... 233 3e-60
ref|NP_650002.1| (NM_141745) CG6345 gene product [Drosophil... 231 1e-59
dbj|BAB55120.1| (AK027449) unnamed protein product [Homo sa... 226 4e-58
ref|NP_057166.1| (NM_016082) CGI-05 protein; hypothetical p... 226 5e-58
ref|NP_562591.1| (NC_003366) conserved hypothetical protein... 208 9e-53
ref|NP_498290.1| (NM_065889) F25B5.5.p [Caenorhabditis eleg... 203 3e-51
ref|NP_057492.1| (NM_016408) hypothetical protein HSPC167; ... 203 3e-51
ref|NP_213332.1| (NC_000918) hypothetical protein [Aquifex ... 201 1e-50
ref|NP_562941.1| (NC_003366) conserved hypothetical protein... 201 1e-50
ref|NP_228639.1| (NC_000853) conserved hypothetical protein... 199 5e-50
ref|NP_604111.1| (NC_003454) Fe-S oxidoreductase [Fusobacte... 199 5e-50
ref|NP_242217.1| (NC_002570) BH1351~unknown conserved prote... 197 2e-49
ref|NP_224460.1| (NC_000922) conserved hypothetical protein... 196 3e-49
ref|NP_445054.1| (NC_002179) conserved hypothetical protein... 196 3e-49
ref|NP_300310.1| (NC_002491) conserved hypothetical protein... 196 3e-49
ref|NP_622614.1| (NC_003869) 2-methylthioadenine synthetase... 195 8e-49
ref|NP_300532.1| (NC_002491) hypothetical protein [Chlamydo... 195 1e-48
ref|NP_224673.1| (NC_000922) Hypothetical Protein [Chlamydo... 194 2e-48
ref|NP_348438.1| (NC_003030) Predicted Fe-S oxidoreductase ... 194 2e-48
ref|NP_622995.1| (NC_003869) 2-methylthioadenine synthetase... 193 3e-48
ref|NP_658342.1| (NC_003995) UPF0004, Uncharacterized prote... 192 7e-48
ref|NP_390421.1| (NC_000964) similar to hypothetical protei... 190 2e-47
ref|NP_485265.1| (NC_003272) hypothetical protein [Nostoc s... 189 4e-47
ref|NP_229658.1| (NC_000853) conserved hypothetical protein... 188 1e-46
ref|NP_372100.1| (NC_002758) conserved hypothetical protein... 186 6e-46
ref|NP_347917.1| (NC_003030) Fe-S oxidoreductases [Clostrid... 185 8e-46
ref|NP_646345.1| (NC_003923) conserved hypothetical protein... 185 8e-46
gb|AAD02057.1| (AF036764) unknown [Clostridium acetobutylicum] 184 2e-45
ref|NP_343738.1| (NC_002754) Conserved hypothetical protein... 183 4e-45
ref|NP_442485.1| (NC_000911) hypothetical protein [Synechoc... 183 4e-45
ref|NP_213577.1| (NC_000918) hypothetical protein [Aquifex ... 182 7e-45
ref|NP_247862.1| (NC_000909) conserved hypothetical protein... 180 3e-44
gb|AAF23796.1|AF213822_11 (AF213822) hypothetical protein [... 174 2e-42
ref|NP_376401.1| (NC_003106) 418aa long conserved hypotheti... 173 3e-42
ref|NP_637912.1| (NC_003902) conserved hypothetical protein... 171 1e-41
ref|NP_275963.1| (NC_000916) conserved protein [Methanother... 171 2e-41
ref|NP_643044.1| (NC_003919) conserved hypothetical protein... 169 6e-41
sp|Q49573|Y16R_MYCIO Hypothetical 51.3 kDa protein in 16S R... 167 3e-40
ref|NP_232248.1| (NC_002505) conserved hypothetical protein... 166 4e-40
ref|NP_286601.1| (NC_002655) orf, hypothetical protein [Esc... 165 9e-40
gb|AAL03926.1|U30252_14 (U30252) unknown [Synechococcus sp.... 165 1e-39
ref|NP_143704.1| (NC_000961) hypothetical protein [Pyrococc... 164 2e-39
sp|O59545|YI75_PYRHO Hypothetical protein PH1875 164 2e-39
ref|NP_455386.1| (NC_003198) conserved hypothetical protein... 164 2e-39
ref|NP_459829.1| (NC_003197) putative Fe-S oxidoreductases ... 164 2e-39
ref|NP_127405.1| (NC_000868) hypothetical protein [Pyrococc... 163 4e-39
ref|NP_629877.1| (NC_003888) conserved hypothetical protein... 162 9e-39
gb|EAA02284.1| (AAAB01003427) ebiP1722 [Anopheles gambiae s... 161 1e-38
ref|NP_579641.1| (NC_003413) hypothetical protein [Pyrococc... 160 2e-38
ref|NP_565035.1| (NM_105867) expressed protein [Arabidopsis... 158 1e-37
ref|NP_249607.1| (NC_002516) conserved hypothetical protein... 158 1e-37
gb|EAA09381.1| (AAAB01008900) agCP15149 [Anopheles gambiae ... 158 1e-37
ref|XP_110019.1| (XM_110019) RIKEN cDNA 6620401C13 [Mus mus... 157 2e-37
ref|NP_060244.1| (NM_017774) hypothetical protein FLJ20342 ... 157 2e-37
ref|XP_165724.1| (XM_165724) hypothetical protein XP_165724... 156 4e-37
ref|NP_282594.1| (NC_002163) hypothetical protein Cj1454c [... 155 7e-37
ref|NP_220797.1| (NC_000963) unknown [Rickettsia prowazekii... 155 9e-37
ref|NP_285512.1| (NC_001264) conserved hypothetical protein... 155 9e-37
ref|NP_634206.1| (NC_003901) hypothetical protein [Methanos... 155 9e-37
ref|NP_282156.1| (NC_002163) hypothetical proteinCj1006c [C... 155 1e-36
ref|NP_102288.1| (NC_002678) hypothetical protein [Mesorhiz... 154 3e-36
ref|NP_422478.1| (NC_002696) conserved hypothetical protein... 153 3e-36
ref|NP_662284.1| (NC_002932) conserved hypothetical protein... 153 3e-36
ref|NP_222991.1| (NC_000921) putative [Helicobacter pylori ... 153 3e-36
emb|CAA10332.1| (AJ131242) hypothetical protein [Wolinella ... 153 4e-36
ref|NP_539050.1| (NC_003317) Fe-S OXIDOREDUCTASE [Brucella ... 153 4e-36
ref|NP_207083.1| (NC_000915) conserved hypothetical protein... 152 6e-36
ref|NP_246510.1| (NC_002663) unknown [Pasteurella multocida... 152 1e-35
ref|NP_105219.1| (NC_002678) hypothetical protein [Mesorhiz... 151 2e-35
ref|NP_360217.1| (NC_003103) unknown [Rickettsia conorii] >... 150 2e-35
ref|NP_223389.1| (NC_000921) putative [Helicobacter pylori ... 150 2e-35
ref|NP_616094.1| (NC_003552) 2-methylthioadenine synthase [... 150 3e-35
ref|NP_387344.1| (NC_003047) CONSERVED HYPOTHETICAL PROTEIN... 150 3e-35
ref|NP_207528.1| (NC_000915) conserved hypothetical protein... 150 4e-35
ref|NP_533359.1| (NC_003304) conserved hypothetical protein... 147 2e-34
ref|NP_611207.1| (NM_137363) CG6550 gene product [Drosophil... 147 2e-34
ref|NP_355629.1| (NC_003062) AGR_C_4885p [Agrobacterium tum... 147 2e-34
ref|NP_614364.1| (NC_003551) 2-methylthioadenine synthetase... 147 2e-34
ref|NP_541681.1| (NC_003318) Fe-S OXIDOREDUCTASE [Brucella ... 147 2e-34
ref|NP_111857.1| (NC_002689) 2-methylthioadenine synthetase... 146 5e-34
ref|NP_070075.1| (NC_000917) conserved hypothetical protein... 145 7e-34
ref|NP_560369.1| (NC_003364) conserved hypothetical protein... 144 2e-33
ref|NP_148004.1| (NC_000854) hypothetical protein [Aeropyru... 144 3e-33
gb|AAH01215.1|AAH01215 (BC001215) Similar to CGI-05 protein... 141 1e-32
ref|NP_519757.1| (NC_003295) CONSERVED HYPOTHETICAL PROTEIN... 140 3e-32
ref|NP_280583.1| (NC_002607) Vng1861c [Halobacterium sp. NR... 139 5e-32
dbj|BAB96555.1| (AB085816) putative fructokinase-like prote... 139 5e-32
gb|AAC38321.2| (AF026544) unknown [Ralstonia eutropha] 136 6e-31
dbj|BAB26688.1| (AK010081) data source:SPTR, source key:Q9J... 132 6e-30
ref|NP_393736.1| (NC_002578) hypothetical protein [Thermopl... 132 1e-29
gb|AAG43441.1|AF186181_1 (AF186181) slr0082 [Synechococcus ... 125 1e-27
ref|NP_218710.1| (NC_000919) conserved hypothetical protein... 124 3e-27
pir||T10441 conserved hypothetical protein - Mycoplasma iow... 101 2e-20
emb|CAA72027.1| (Y11140) homology to M. leprae B2235_C2_195... 85 2e-15
ref|NP_614081.1| (NC_003551) Predicted Fe-S oxidoreductase ... 84 3e-15
ref|NP_276299.1| (NC_000916) phosphonoacetaldehyde methylas... 80 5e-14
pir||T10440 conserved hypothetical protein - Mycoplasma iow... 75 2e-12
ref|NP_247860.1| (NC_000909) conserved hypothetical protein... 75 2e-12
ref|NP_248493.1| (NC_000909) conserved hypothetical protein... 69 1e-10
ref|NP_227997.1| (NC_000853) conserved hypothetical protein... 68 2e-10
ref|NP_615215.1| (NC_003552) conserved hypothetical protein... 67 4e-10
ref|NP_376775.1| (NC_003106) 492aa long conserved hypotheti... 62 1e-08
ref|NP_633546.1| (NC_003901) Fe-S oxidoreductase [Methanosa... 61 3e-08
dbj|BAB23330.1| (AK004490) data source:SPTR, source key:Q9N... 60 5e-08
ref|NP_344196.1| (NC_002754) Conserved hypothetical protein... 59 1e-07
ref|NP_143544.1| (NC_000961) hypothetical protein [Pyrococc... 57 4e-07
ref|NP_490844.1| (NM_058443) Y92H12BL.3.p [Caenorhabditis e... 55 2e-06
ref|NP_126164.1| (NC_000868) hypothetical protein [Pyrococc... 53 6e-06
ref|NP_579452.1| (NC_003413) hypothetical protein [Pyrococc... 51 3e-05
ref|NP_111529.1| (NC_002689) Fe-S oxidoreductase [Thermopla... 50 7e-05
dbj|BAB69397.1| (AB070956) methyltransferase [Streptomyces ... 49 2e-04
ref|NP_394365.1| (NC_002578) conserved hypothetical protein... 46 8e-04
ref|NP_614072.1| (NC_003551) Fe-S oxidoreductase family pro... 45 0.002
ref|NP_441949.1| (NC_000911) unknown protein [Synechocystis... 45 0.002
ref|NP_603060.1| (NC_003454) Oxygen-independent coproporphy... 43 0.006
>ref|NP_207067.1| (NC_000915) conserved hypothetical ATP-binding protein
[Helicobacter pylori 26695]
sp|P56131|Y269_HELPY Hypothetical protein HP0269
pir||E64553 conserved hypothetical ATP-binding protein HP0269 - Helicobacter
pylori (strain 26695)
gb|AAD07337.1| (AE000546) conserved hypothetical ATP-binding protein [Helicobacter
pylori 26695]
Length = 437
Score = 868 bits (2242), Expect = 0.0
Identities = 437/437 (100%), Positives = 437/437 (100%)
Query: 1 MKVYIETMGCAMNSRDSEHLLSELSKLDYKETNDPKTADLILINTCSVREKPERKLFSEI 60
MKVYIETMGCAMNSRDSEHLLSELSKLDYKETNDPKTADLILINTCSVREKPERKLFSEI
Sbjct: 1 MKVYIETMGCAMNSRDSEHLLSELSKLDYKETNDPKTADLILINTCSVREKPERKLFSEI 60
Query: 61 GQFAKIKKPNAKIGVCGCTASHMGADILKKAPSVSFVLGARNVSKISQVIHKEKAVEVAI 120
GQFAKIKKPNAKIGVCGCTASHMGADILKKAPSVSFVLGARNVSKISQVIHKEKAVEVAI
Sbjct: 61 GQFAKIKKPNAKIGVCGCTASHMGADILKKAPSVSFVLGARNVSKISQVIHKEKAVEVAI 120
Query: 121 DYDESAYAFEFFEKKAQIRSLLNISIGCDKKCAYCIVPHTRGKEISIPMDLILKEAEKLA 180
DYDESAYAFEFFEKKAQIRSLLNISIGCDKKCAYCIVPHTRGKEISIPMDLILKEAEKLA
Sbjct: 121 DYDESAYAFEFFEKKAQIRSLLNISIGCDKKCAYCIVPHTRGKEISIPMDLILKEAEKLA 180
Query: 181 NNGTKELMLLGQNVNNYGARFSSEHAKVDFSDLLDKLSEIQGIERIRFTSPHPLHMNDGF 240
NNGTKELMLLGQNVNNYGARFSSEHAKVDFSDLLDKLSEIQGIERIRFTSPHPLHMNDGF
Sbjct: 181 NNGTKELMLLGQNVNNYGARFSSEHAKVDFSDLLDKLSEIQGIERIRFTSPHPLHMNDGF 240
Query: 241 LERFAKNPKVCKSIHMPLQSGSSAVLKMMRRGYSKEWFLNRVERLKALVPEVGISTDIIV 300
LERFAKNPKVCKSIHMPLQSGSSAVLKMMRRGYSKEWFLNRVERLKALVPEVGISTDIIV
Sbjct: 241 LERFAKNPKVCKSIHMPLQSGSSAVLKMMRRGYSKEWFLNRVERLKALVPEVGISTDIIV 300
Query: 301 GFPNESDKDFEDTMEVLEKVRFDTLYSFIYSPRPFTEAGAWKERVPLEVSSSRLERLQNR 360
GFPNESDKDFEDTMEVLEKVRFDTLYSFIYSPRPFTEAGAWKERVPLEVSSSRLERLQNR
Sbjct: 301 GFPNESDKDFEDTMEVLEKVRFDTLYSFIYSPRPFTEAGAWKERVPLEVSSSRLERLQNR 360
Query: 361 HKEILEEKAKLEVGKTHVVLVENRREMDNQIVGFEGRSDTGKFIEVTCKEKRNPGELVKV 420
HKEILEEKAKLEVGKTHVVLVENRREMDNQIVGFEGRSDTGKFIEVTCKEKRNPGELVKV
Sbjct: 361 HKEILEEKAKLEVGKTHVVLVENRREMDNQIVGFEGRSDTGKFIEVTCKEKRNPGELVKV 420
Query: 421 EIISHSKGRLMAATKGN 437
EIISHSKGRLMAATKGN
Sbjct: 421 EIISHSKGRLMAATKGN 437
>ref|NP_222975.1| (NC_000921) putative [Helicobacter pylori J99]
sp|Q9ZMG6|Y269_HELPJ Hypothetical protein JHP0254
pir||E71953 hypothetical protein jhp0254 - Helicobacter pylori (strain J99)
gb|AAD05846.1| (AE001463) putative [Helicobacter pylori J99]
Length = 437
Score = 847 bits (2187), Expect = 0.0
Identities = 425/437 (97%), Positives = 430/437 (98%)
Query: 1 MKVYIETMGCAMNSRDSEHLLSELSKLDYKETNDPKTADLILINTCSVREKPERKLFSEI 60
MKVYIETMGCAMNSRDSEHLLSELSKLDYKET+DPK ADLILINTCSVREKPERKLFSEI
Sbjct: 1 MKVYIETMGCAMNSRDSEHLLSELSKLDYKETSDPKMADLILINTCSVREKPERKLFSEI 60
Query: 61 GQFAKIKKPNAKIGVCGCTASHMGADILKKAPSVSFVLGARNVSKISQVIHKEKAVEVAI 120
GQFAKIKKPNAKIGVCGCTASHMGADILKKAPSVSFVLGARNVSKISQVIHKEKAVEVAI
Sbjct: 61 GQFAKIKKPNAKIGVCGCTASHMGADILKKAPSVSFVLGARNVSKISQVIHKEKAVEVAI 120
Query: 121 DYDESAYAFEFFEKKAQIRSLLNISIGCDKKCAYCIVPHTRGKEISIPMDLILKEAEKLA 180
DYDESAYAFEFFEKKAQIRSLLNISIGCDKKCAYCIVPHTRGKEISIPMDLILKEAEKLA
Sbjct: 121 DYDESAYAFEFFEKKAQIRSLLNISIGCDKKCAYCIVPHTRGKEISIPMDLILKEAEKLA 180
Query: 181 NNGTKELMLLGQNVNNYGARFSSEHAKVDFSDLLDKLSEIQGIERIRFTSPHPLHMNDGF 240
NNGTKELMLLGQNVNNYG RFSSEHAKV FSDLLDKLSEIQGIERIRFTSPHPLHMND F
Sbjct: 181 NNGTKELMLLGQNVNNYGVRFSSEHAKVGFSDLLDKLSEIQGIERIRFTSPHPLHMNDAF 240
Query: 241 LERFAKNPKVCKSIHMPLQSGSSAVLKMMRRGYSKEWFLNRVERLKALVPEVGISTDIIV 300
LERFA+NPKVCKSIHMPLQSGSSAVLKMMRRGYSKEWFLNRVERLKALVPEVGISTDIIV
Sbjct: 241 LERFAQNPKVCKSIHMPLQSGSSAVLKMMRRGYSKEWFLNRVERLKALVPEVGISTDIIV 300
Query: 301 GFPNESDKDFEDTMEVLEKVRFDTLYSFIYSPRPFTEAGAWKERVPLEVSSSRLERLQNR 360
GFPNESDKDFEDTMEVLEKVRFDTLYSFIYSPRPFTEAGAWKERVPLE+SS RLERLQNR
Sbjct: 301 GFPNESDKDFEDTMEVLEKVRFDTLYSFIYSPRPFTEAGAWKERVPLEISSLRLERLQNR 360
Query: 361 HKEILEEKAKLEVGKTHVVLVENRREMDNQIVGFEGRSDTGKFIEVTCKEKRNPGELVKV 420
HKEILEEKAKLEVGKTHVVLVENRREMD QIVGFEGRSDTGKFIEVTCKEK+NPGELV+V
Sbjct: 361 HKEILEEKAKLEVGKTHVVLVENRREMDGQIVGFEGRSDTGKFIEVTCKEKKNPGELVRV 420
Query: 421 EIISHSKGRLMAATKGN 437
EIISHSKGRLMA TKGN
Sbjct: 421 EIISHSKGRLMATTKGN 437
>ref|NP_281645.1| (NC_002163) hypothetical protein Cj0458c [Campylobacter jejuni]
pir||E81390 hypothetical protein Cj0458c [imported] - Campylobacter jejuni
(strain NCTC 11168)
emb|CAB75096.1| (AL139075) hypothetical protein Cj0458c [Campylobacter jejuni]
Length = 433
Score = 495 bits (1275), Expect = e-139
Identities = 249/411 (60%), Positives = 310/411 (74%), Gaps = 6/411 (1%)
Query: 2 KVYIETMGCAMNSRDSEHLLSELS-KLDYKETNDPKTADLILINTCSVREKPERKLFSEI 60
K++I+T+GCAMN RDSEH+++EL+ K +Y T D K ADLILINTCSVREKP KLFSE+
Sbjct: 5 KLFIQTLGCAMNVRDSEHMIAELTQKENYALTEDIKEADLILINTCSVREKPVHKLFSEV 64
Query: 61 GQFAKIKKPNAKIGVCGCTASHMGADILKKAPSVSFVLGARNVSKISQVIHKEKAVEVAI 120
G F K+KK AKIGVCGCTASH+G +I K+AP V FVLGARN+SKI+Q I K + V I
Sbjct: 65 GGFEKVKKEGAKIGVCGCTASHLGNEIFKRAPYVDFVLGARNISKITQAIKTPKFMGVDI 124
Query: 121 DYDESAYAFEFFEKKAQIRSLLNISIGCDKKCAYCIVPHTRGKEISIPMDLILKEAEKLA 180
DYDES +AF F + + +S +NISIGCDK C YCIVPHTRG EISIP ++I KEA+K
Sbjct: 125 DYDESEFAFADF-RNSIYKSYINISIGCDKHCTYCIVPHTRGDEISIPFNIIYKEAQKAI 183
Query: 181 NNGTKELMLLGQNVNNYGARFSSEHAKVDFSDLLDKLSEIQGIERIRFTSPHPLHMNDGF 240
G KE+ LLGQNVNNYG RF +EH K+DFSDLL++LS I+G+ERIRFTSPHPLHM+D F
Sbjct: 184 EKGAKEIFLLGQNVNNYGKRFRNEHKKMDFSDLLEELSTIEGLERIRFTSPHPLHMDDKF 243
Query: 241 LERFAKNPKVCKSIHMPLQSGSSAVLKMMRRGYSKEWFLNRVERLKALVPEVGISTDIIV 300
LE FA NPKVCKS+HMPLQSGSS +LK M+RGY+KEW+LNR +L+ L P V ISTDIIV
Sbjct: 244 LEVFANNPKVCKSMHMPLQSGSSEILKAMKRGYTKEWYLNRALKLRELCPNVSISTDIIV 303
Query: 301 GFPNESDKDFEDTMEVLEKVRFDTLYSFIYSPRPFTEAGAWKERVPLEVSSSRLERLQNR 360
FP ES+KDFE+T++VLEKVRF+ ++SF YS RP T+A ++ E++S RL LQNR
Sbjct: 304 AFPGESEKDFEETVDVLEKVRFEQIFSFKYSKRPLTKAATMPNQIDEEIASRRLSTLQNR 363
Query: 361 HKEILEEKAKLEVGKTHVVLVENRREMDNQIVGFEGRSDTGKFIEVTCKEK 411
H EIL++ K + KT VL E R ++ GR+D ++V E+
Sbjct: 364 HSEILDKIVKKQENKTFKVLFEELRAGNS----IAGRTDNNFLVQVEGSEE 410
>ref|NP_213198.1| (NC_000918) hypothetical protein [Aquifex aeolicus]
sp|O66638|Y284_AQUAE Hypothetical protein AQ_284
pir||B70326 conserved hypothetical protein aq_284 - Aquifex aeolicus
gb|AAC06605.1| (AE000682) hypothetical protein [Aquifex aeolicus]
Length = 440
Score = 322 bits (824), Expect = 7e-87
Identities = 176/449 (39%), Positives = 279/449 (61%), Gaps = 27/449 (6%)
Query: 2 KVYIETMGCAMNSRDSEHLLSELSKLDYKETNDPKTADLILINTCSVREKPERKLFSEIG 61
K +I+T GC MN DSE + L + Y++T++ + ADLI++NTC++REKP++K+ S +G
Sbjct: 4 KFFIKTFGCQMNFNDSERIRGLLKTIGYEQTDNWEEADLIILNTCTIREKPDQKVLSHLG 63
Query: 62 QFAKIKKPNAK--IGVCGCTASHMGADILKKAPSVSFVLGARNVSKISQVIHKEKAVEVA 119
++ KIK+ N K I V GC A G +++KKAP + + + N+ ++ ++I++ +A A
Sbjct: 64 EYKKIKEKNPKALIAVAGCLAQRTGWELVKKAPVIDIMFSSFNMHQLPELINQAQAGYKA 123
Query: 120 I------DYDESAYAFEFFEKKAQIRSLLNISIGCDKKCAYCIVPHTRGKEISIPMDLIL 173
I DE E+ + + + I GCDK C YC+VP TRGKE S + IL
Sbjct: 124 IAILDELPQDEDKIWEYPVERDNKYCAYVTIIKGCDKNCTYCVVPRTRGKERSRALHSIL 183
Query: 174 KEAEKLANNGTKELMLLGQNVNNYGARFSSEHAKVDFSDLLDKLSEIQGIERIRFTSPHP 233
E ++L ++G +E+ LLGQNV +G F + FS+LL ++S+I G+ERIRFT+ HP
Sbjct: 184 DEVKRLVDDGVREIHLLGQNVTAWGKDFEKP---IPFSELLYQVSKIDGVERIRFTTGHP 240
Query: 234 LHMNDGFLERFAKNPKVCKSIHMPLQSGSSAVLKMMRRGYSKEWFLNRVERLKALVPEVG 293
+ D +E A P+VC ++H+P Q+GS+ +L +M RGY+KE +L ++E+LK V ++
Sbjct: 241 RDLTDDIIEAMADIPQVCNALHLPFQAGSNRILALMDRGYTKEEYLEKIEKLKEKVKDIA 300
Query: 294 ISTDIIVGFPNESDKDFEDTMEVLEKVRFDTLYSFIYSPRPFTEAGAWKERVPLEVSSSR 353
+STD+IVGFP E+++DFE T++VL+KVRF+ ++SF +SPRP T A + ++P +V + R
Sbjct: 301 MSTDVIVGFPTETEEDFEHTLDVLKKVRFEQVFSFKFSPRPGTPAAEMEGQIPDDVKTER 360
Query: 354 LERLQNRHKEILEEKAKLEVGKTHVVLVENRREMDNQIVGFEGRSDTGKFIEVTCKEKRN 413
+ RL K IL E AK G VLVE E + +++ GR+ T K+ K +
Sbjct: 361 MRRLLELQKSILSEIAKKYEGTVQEVLVE--EEKNGELI---GRTTTNKWASF----KGD 411
Query: 414 P---GELVKVEIISHS----KGRLMAATK 435
P G++VK+++I S +G L+ K
Sbjct: 412 PSLLGKIVKIKVIKSSPFSLEGELLEVIK 440
>ref|NP_389583.1| (NC_000964) similar to hypothetical proteins [Bacillus subtilis]
sp|O31778|YMCB_BACSU Hypothetical protein ymcB
pir||D69884 conserved hypothetical protein ymcB - Bacillus subtilis
emb|CAB13574.1| (Z99112) similar to hypothetical proteins [Bacillus subtilis]
Length = 509
Score = 297 bits (761), Expect = 1e-79
Identities = 174/432 (40%), Positives = 247/432 (56%), Gaps = 20/432 (4%)
Query: 2 KVYIETMGCAMNSRDSEHLLSELSKLDYKETNDPKTADLILINTCSVREKPERKLFSEIG 61
K YI T GC MN D+E + L Y+ TN A++IL+NTC++RE E K+F E+G
Sbjct: 67 KFYIRTYGCQMNEHDTEVMAGIFMALGYEATNSVDDANVILLNTCAIRENAENKVFGELG 126
Query: 62 QFAKIKK--PNAKIGVCGCTASHMGA--DILKKAPSVSFVLGARNVSKISQVIH-----K 112
+KK P+ +GVCGC + ILKK P V + G N+ ++ +++ K
Sbjct: 127 HLKALKKNNPDLILGVCGCMSQEESVVNRILKKHPFVDMIFGTHNIHRLPELLSEAYLSK 186
Query: 113 EKAVEVAIDYDESAYAFEFFEK--KAQIRSLLNISIGCDKKCAYCIVPHTRGKEISIPMD 170
E VEV + + E K +I+ +NI GCDK C YCIVP+TRGKE S +
Sbjct: 187 EMVVEV---WSKEGDVIENLPKVRNGKIKGWVNIMYGCDKFCTYCIVPYTRGKERSRRPE 243
Query: 171 LILKEAEKLANNGTKELMLLGQNVNNYGARFSSEHAKVDFSDLLDKLSEIQGIERIRFTS 230
I++E +LA+ G KE+ LLGQNVN YG F E DL+D+L +I I RIRFT+
Sbjct: 244 DIIQEVRRLASEGYKEITLLGQNVNAYGKDF--EDMTYGLGDLMDELRKID-IPRIRFTT 300
Query: 231 PHPLHMNDGFLERFAKNPKVCKSIHMPLQSGSSAVLKMMRRGYSKEWFLNRVERLKALVP 290
HP +D +E AK + IH+P+QSGSS VLK+M R Y +E ++ V ++K +P
Sbjct: 301 SHPRDFDDRLIEVLAKGGNLLDHIHLPVQSGSSEVLKLMARKYDRERYMELVRKIKEAMP 360
Query: 291 EVGISTDIIVGFPNESDKDFEDTMEVLEKVRFDTLYSFIYSPRPFTEAGAWKERVPLEVS 350
++TDIIVGFPNE+D+ FE+T+ + +V FD+ Y+FIYSPR T A K+ VP+ V
Sbjct: 361 NASLTTDIIVGFPNETDEQFEETLSLYREVEFDSAYTFIYSPREGTPAAKMKDNVPMRVK 420
Query: 351 SSRLERLQNRHKEILEEKAKLEVGKTHVVLVENRREMDNQIVGFEGRSDTGKFIEVTCKE 410
RL+RL EI +K K GK VLVE + + I+ G ++ K +
Sbjct: 421 KERLQRLNALVNEISAKKMKEYEGKVVEVLVEGESKNNPDILA--GYTEKSKLVNFK-GP 477
Query: 411 KRNPGELVKVEI 422
K G++V+V+I
Sbjct: 478 KEAIGKIVRVKI 489
>ref|NP_252669.1| (NC_002516) conserved hypothetical protein [Pseudomonas aeruginosa]
sp|Q51470|Y3I0_PSEAE Hypothetical protein PA3980
pir||F83147 conserved hypothetical protein PA3980 [imported] - Pseudomonas
aeruginosa (strain PAO1)
gb|AAG07367.1|AE004816_3 (AE004816) conserved hypothetical protein [Pseudomonas aeruginosa]
Length = 446
Score = 294 bits (753), Expect = 1e-78
Identities = 168/445 (37%), Positives = 269/445 (59%), Gaps = 16/445 (3%)
Query: 2 KVYIETMGCAMNSRDSEHLLSELSKLDYKE-TNDPKTADLILINTCSVREKPERKLFSEI 60
K++IET GC MN DS + L + E T + AD+IL+NTCS+REK + K+FS++
Sbjct: 4 KLFIETHGCQMNEYDSSRMADLLGEHQALEVTENAAEADVILLNTCSIREKAQEKVFSKL 63
Query: 61 GQFAKIKK--PNAKIGVCGCTASHMGADILKKAPSVSFVLGARNVSKISQVIHKEKAVEV 118
G + ++K+ P+ IGV GC AS GA I ++AP V V G + + ++ ++I ++
Sbjct: 64 GMWRELKQQNPDLVIGVGGCVASQEGAAIRERAPYVDVVFGPQTLHRLPEMIDAARSTRK 123
Query: 119 AIDYDESAYAFEFFEKKAQIR-----SLLNISIGCDKKCAYCIVPHTRGKEISIPMDLIL 173
D S E F++ + R + +++ GC K C++C+VP+TRG+E+S P D ++
Sbjct: 124 P-QVDVSFPEIEKFDRLPEPRVDGPTAFVSVMEGCSKYCSFCVVPYTRGEEVSRPFDDVI 182
Query: 174 KEAEKLANNGTKELMLLGQNVNNYGARFSSEHAKVDFSDLLDKLSEIQGIERIRFTSPHP 233
E LA NG +E+ LLGQNVN + + + DF++LL ++ + GIERIR+T+ HP
Sbjct: 183 AEVIHLAENGVREVTLLGQNVNGFRG-LTHDGRLADFAELLRVVAAVDGIERIRYTTSHP 241
Query: 234 LHMNDGFLERFAKNPKVCKSIHMPLQSGSSAVLKMMRRGYSKEWFLNRVERLKALVPEVG 293
L +D ++ A+ P++ K IH+P+QSGS VL M+R ++ + +R+ +LKA VP++
Sbjct: 242 LEFSDALIQAHAEVPELVKFIHLPVQSGSDRVLAAMKRNHTVLEYKSRIRKLKAAVPDIC 301
Query: 294 ISTDIIVGFPNESDKDFEDTMEVLEKVRFDTLYSFIYSPRPFTEAGAWKERVPLEVSSSR 353
IS+D IVGFP E++KDFE TM+++E V FD +SFIYS RP T A + +P EV R
Sbjct: 302 ISSDFIVGFPGETEKDFEQTMKLVEDVGFDFSFSFIYSARPGTPAADLADDLPEEVKKQR 361
Query: 354 LERLQNRHKEILEEKAKLEVGKTHVVLVENRREMDNQIVGFEGRSDTGKFIEVTCKEKRN 413
L+ LQ+R + E ++ VG T +LV + + D ++ +GR++ + + C R
Sbjct: 362 LQILQSRIHQQGYEISRRMVGSTQRILVTDFSKKDPGML--QGRTENNRIVNFRCDNPRL 419
Query: 414 PGELVKVEI---ISHS-KGRLMAAT 434
G+ +V I + HS +G L+ +T
Sbjct: 420 IGQFAQVHIDDALPHSLRGTLIDST 444
>ref|NP_562009.1| (NC_003366) conserved hypothetical protein [Clostridium
perfringens]
dbj|BAB80799.1| (AP003189) conserved hypothetical protein [Clostridium perfringens]
Length = 447
Score = 293 bits (751), Expect = 2e-78
Identities = 159/427 (37%), Positives = 253/427 (59%), Gaps = 14/427 (3%)
Query: 5 IETMGCAMNSRDSEHLLSELSKLDYKETNDPKTADLILINTCSVREKPERKLFSEIGQFA 64
I T GC MN DSE L L Y+ T + + A +I+ NTC VRE E K+F +GQ
Sbjct: 14 ISTYGCQMNEEDSEKLSGMLKSQGYERTENKEEASIIIFNTCCVRENAENKVFGNLGQLK 73
Query: 65 KIKK--PNAKIGVCGCTASHMG-AD-ILKKAPSVSFVLGARNVSKISQVIHK--EKAVEV 118
++KK PN I +CGC +G AD +LK P V + G N K + +H+ ++ V+V
Sbjct: 74 QLKKKNPNLVIAICGCMMQQVGMADKVLKTFPYVDIIFGTHNAHKFPEYLHRVLQEGVQV 133
Query: 119 A--IDYDESAYAFEFFEKKAQIRSLLNISIGCDKKCAYCIVPHTRGKEISIPMDLILKEA 176
++ +E ++K+ +++ + I GC+ C YCIVP+ RG+E S + I+KE
Sbjct: 134 KEILNKEEGIVEGLPIDRKSDVKAFVTIMYGCNNFCTYCIVPYVRGRERSRKSEDIIKEI 193
Query: 177 EKLANNGTKELMLLGQNVNNYGARFSSEHAKVDFSDLLDKLSEIQGIERIRFTSPHPLHM 236
E+L + G KE+ LLGQNVN+YG + +DF+ LL K++E++G+ER+RF + HP +
Sbjct: 194 EELVSQGYKEITLLGQNVNSYGKGLEED---IDFAGLLRKVNEVKGLERVRFMTSHPKDL 250
Query: 237 NDGFLERFAKNPKVCKSIHMPLQSGSSAVLKMMRRGYSKEWFLNRVERLKALVPEVGIST 296
+D + + K+C+ +H+P+QSGSS +LK M R Y +E++L+ V+++K+ +P+V ++T
Sbjct: 251 SDDVIMAIKECDKLCEQVHLPVQSGSSRILKEMNRHYDREYYLDLVKKIKSEIPDVTLTT 310
Query: 297 DIIVGFPNESDKDFEDTMEVLEKVRFDTLYSFIYSPRPFTEAGAWKERVPLEVSSSRLER 356
DII+GFP E+++DF DT+ + E+V +D+ ++FIYS R T A + ++P ++ R R
Sbjct: 311 DIIIGFPGETEEDFLDTLSLCEEVGYDSAFTFIYSRRNHTPADKMENQIPDDIKHDRFNR 370
Query: 357 LQNRHKEILEEKAKLEVGKTHVVLVENRREMDNQIVGFEGRSDTGKFIEVTCKEKRNPGE 416
L + + K K GK VLVE + D GR+ GK + EK GE
Sbjct: 371 LVEAINKKVVIKNKEYEGKVVEVLVEGPSKNDE--TKLTGRTRNGKLVNFAGDEKL-VGE 427
Query: 417 LVKVEII 423
LV ++I+
Sbjct: 428 LVNLKIV 434
>ref|NP_657738.1| (NC_003995) UPF0004, Uncharacterized protein family UPF0004
[Bacillus anthracis A2012] [Bacillus anthracis str.
A2012]
Length = 509
Score = 291 bits (745), Expect = 1e-77
Identities = 168/432 (38%), Positives = 249/432 (56%), Gaps = 20/432 (4%)
Query: 2 KVYIETMGCAMNSRDSEHLLSELSKLDYKETNDPKTADLILINTCSVREKPERKLFSEIG 61
K YI T GC MN D+E + + L Y+ T + AD++L+NTC++RE E K+F E+G
Sbjct: 67 KFYIRTYGCQMNEHDTEVMAGIFTALGYEPTFSTEDADVVLLNTCAIRENAENKVFGELG 126
Query: 62 QFAKIKKPNAK--IGVCGCTASHMGA--DILKKAPSVSFVLGARNVSKISQVIH-----K 112
+K+ N+ IGVCGC + I++K V V G N+ ++ ++ K
Sbjct: 127 HLKSLKRRNSDLLIGVCGCMSQEESVVNKIMQKNQHVDMVFGTHNIHRLPYILKDAMFSK 186
Query: 113 EKAVEVAIDYDESAYAFEFFEK--KAQIRSLLNISIGCDKKCAYCIVPHTRGKEISIPMD 170
E VEV + + E K + I++ +NI GCDK C YCIVP+TRGKE S +
Sbjct: 187 ETVVEV---WSKEGDVIENLPKVRRGDIKAWVNIMYGCDKFCTYCIVPYTRGKERSRRPE 243
Query: 171 LILKEAEKLANNGTKELMLLGQNVNNYGARFSSEHAKVDFSDLLDKLSEIQGIERIRFTS 230
I++E LA NG KE+ LLGQNVN YG F E + DL+D+L ++ I RIRFT+
Sbjct: 244 DIIQEIRHLAANGYKEITLLGQNVNAYGKDF--EDIEYGLGDLMDELRKVD-IARIRFTT 300
Query: 231 PHPLHMNDGFLERFAKNPKVCKSIHMPLQSGSSAVLKMMRRGYSKEWFLNRVERLKALVP 290
HP +D +E K + + IH+P+QSGS+ +LK+M R YS+E +L V ++K +P
Sbjct: 301 SHPRDFDDHLIEVLGKGGNLVEHIHLPVQSGSTEMLKIMARKYSREHYLELVRKIKEAIP 360
Query: 291 EVGISTDIIVGFPNESDKDFEDTMEVLEKVRFDTLYSFIYSPRPFTEAGAWKERVPLEVS 350
++TDIIVGFPNE+D+ FE+TM + +V FDT ++FIYSPR T A K+ VP+EV
Sbjct: 361 NAVLTTDIIVGFPNETDEQFEETMSLYREVGFDTAFTFIYSPREGTPAAKMKDNVPMEVK 420
Query: 351 SSRLERLQNRHKEILEEKAKLEVGKTHVVLVENRREMDNQIVGFEGRSDTGKFIEVTCKE 410
RL+RL ++ EK G+ VLV+ + + +++ G + T K +
Sbjct: 421 KERLQRLNALVNKLAIEKNDRYKGQIVEVLVDGESKNNPEVLA--GYTRTNKLVNFVA-P 477
Query: 411 KRNPGELVKVEI 422
K G+LVK+++
Sbjct: 478 KSLIGQLVKIKV 489
>pir||S57900 conserved hypothetical protein 2 (hemL 3' region) - Pseudomonas
aeruginosa
emb|CAA57577.1| (X82072) orf2 [Pseudomonas aeruginosa]
Length = 446
Score = 290 bits (743), Expect = 2e-77
Identities = 167/445 (37%), Positives = 268/445 (59%), Gaps = 16/445 (3%)
Query: 2 KVYIETMGCAMNSRDSEHLLSELSKLDYKE-TNDPKTADLILINTCSVREKPERKLFSEI 60
K++IET GC MN DS + L + E T + AD+IL+NTCS+REK + K+ S++
Sbjct: 4 KLFIETHGCQMNEYDSSRMADLLGEHQALEVTENAAEADVILLNTCSIREKVQEKVCSKL 63
Query: 61 GQFAKIKK--PNAKIGVCGCTASHMGADILKKAPSVSFVLGARNVSKISQVIHKEKAVEV 118
G + ++K+ P+ IGV GC AS GA I ++AP V V G + + ++ ++I ++
Sbjct: 64 GMWRELKQQNPDLVIGVGGCVASQEGAAIRERAPYVDVVFGPQTLHRLPEMIDAARSTRK 123
Query: 119 AIDYDESAYAFEFFEKKAQIR-----SLLNISIGCDKKCAYCIVPHTRGKEISIPMDLIL 173
D S E F++ + R + +++ GC K C++C+VP+TRG+E+S P D ++
Sbjct: 124 P-QVDVSFPEIEKFDRLPEPRVDGPTAFVSVMEGCSKYCSFCVVPYTRGEEVSRPFDDVI 182
Query: 174 KEAEKLANNGTKELMLLGQNVNNYGARFSSEHAKVDFSDLLDKLSEIQGIERIRFTSPHP 233
E LA NG +E+ LLGQNVN + + + DF++LL ++ + GIERIR+T+ HP
Sbjct: 183 AEVIHLAENGVREVTLLGQNVNGFRG-LTHDGRLADFAELLRVVAAVDGIERIRYTTSHP 241
Query: 234 LHMNDGFLERFAKNPKVCKSIHMPLQSGSSAVLKMMRRGYSKEWFLNRVERLKALVPEVG 293
L +D ++ A+ P++ K IH+P+QSGS VL M+R ++ + +R+ +LKA VP++
Sbjct: 242 LEFSDALIQAHAEVPELVKFIHLPVQSGSDRVLAAMKRNHTVLEYKSRIRKLKAAVPDIC 301
Query: 294 ISTDIIVGFPNESDKDFEDTMEVLEKVRFDTLYSFIYSPRPFTEAGAWKERVPLEVSSSR 353
IS+D IVGFP E++KDFE TM+++E V FD +SFIYS RP T A + +P EV R
Sbjct: 302 ISSDFIVGFPGETEKDFEQTMKLVEDVGFDFSFSFIYSARPGTPAADLADDLPEEVKKQR 361
Query: 354 LERLQNRHKEILEEKAKLEVGKTHVVLVENRREMDNQIVGFEGRSDTGKFIEVTCKEKRN 413
L+ LQ+R + E ++ VG T +LV + + D ++ +GR++ + + C R
Sbjct: 362 LQILQSRIHQQGYEISRRMVGSTQRILVTDFSKEDPGML--QGRTENNRIVNFRCDNPRL 419
Query: 414 PGELVKVEI---ISHS-KGRLMAAT 434
G+ +V I + HS +G L+ +T
Sbjct: 420 IGQFAQVHIDDALPHSLRGTLIDST 444
>ref|NP_228462.1| (NC_000853) conserved hypothetical protein [Thermotoga maritima]
pir||D72352 conserved hypothetical protein - Thermotoga maritima (strain MSB8)
gb|AAD35737.1|AE001738_17 (AE001738) conserved hypothetical protein [Thermotoga maritima]
Length = 443
Score = 290 bits (742), Expect = 2e-77
Identities = 173/433 (39%), Positives = 259/433 (58%), Gaps = 24/433 (5%)
Query: 1 MKVYIETMGCAMNSRDSEHLLSELSKLDYKETNDPKTADLILINTCSVREKPERKLFSEI 60
M+ YI+T GC MN DSE + L K + + P+ AD+++INTC+VR K E K +SE+
Sbjct: 1 MRFYIKTFGCQMNENDSEAMAGLLVKEGFTPASSPEEADVVIINTCAVRRKSEEKAYSEL 60
Query: 61 GQFAKIKKPNA-KIGVCGCTASHMGADILKKAPSVSFVLGARNVSKISQVIHKEKAVEVA 119
GQ K+KK +GV GC A L+K FVLG R V ++++ + K E
Sbjct: 61 GQVLKLKKKKKIVVGVAGCVAEKEREKFLEKG--ADFVLGTRAVPRVTEAVKKALEGEKV 118
Query: 120 IDYDESAYAFEFFEKKAQIRSL-----LNISIGCDKKCAYCIVPHTRGKEISIPMDLILK 174
+++ + E+ + +IR+ + I GCD+ C YCIVP+TRG+E S PM IL+
Sbjct: 119 ALFED--HLDEYTHELPRIRTSRHHAWVTIIHGCDRFCTYCIVPYTRGRERSRPMADILE 176
Query: 175 EAEKLANNGTKELMLLGQNVNNYGARFSSEHAKVDFSDLLDKLSEIQGIERIRFTSPHPL 234
E +KLA G +E+ LGQNV+ YG + + LL++ S+I+GIERI F + +P
Sbjct: 177 EVKKLAEQGYREVTFLGQNVDAYGKDLKDGSS---LAKLLEEASKIEGIERIWFLTSYPT 233
Query: 235 HMNDGFLERFAKNPKVCKSIHMPLQSGSSAVLKMMRRGYSKEWFLNRVERLKALVPEVGI 294
+D +E AKNPKV KS+H+P+QSGS+ +LK+M R Y+KE +L +E++++ VPEV I
Sbjct: 234 DFSDELIEVIAKNPKVAKSVHLPVQSGSNRILKLMNRRYTKEEYLALLEKIRSKVPEVAI 293
Query: 295 STDIIVGFPNESDKDFEDTMEVLEKVRFDTLYSFIYSPRPFTEAGA-WKERVPLEVSSSR 353
S+DIIVGFP E+++DF +T++++EK +F+ L IYSPR T A +K+ VP E R
Sbjct: 294 SSDIIVGFPTETEEDFMETVDLVEKAQFERLNLAIYSPREGTVAWKYYKDDVPYEEKVRR 353
Query: 354 LERLQNRHKEILEEKAKLEVGKTHVVLVENR--------REMDNQIVGFEGRS-DTGKFI 404
++ L N K I + + GKT ++VE + R++ N+I+ FEG G+F
Sbjct: 354 MQFLMNLQKRINRKLNERYRGKTVRIIVEAQAKNGLFYGRDIRNKIIAFEGEDWMIGRFA 413
Query: 405 EVTCKEKRNPGEL 417
+V EK G L
Sbjct: 414 DVKV-EKITAGPL 425
>ref|NP_371816.1| (NC_002758) conserved hypothetical protein [Staphylococcus aureus
subsp. aureus Mu50]
ref|NP_374408.1| (NC_002745) conserved hypotehtical protein [Staphylococcus aureus
subsp. aureus N315]
ref|NP_645992.1| (NC_003923) conserved hypotehtical protein [Staphylococcus aureus
subsp. aureus MW2]
dbj|BAB42387.1| (AP003133) conserved hypotehtical protein [Staphylococcus aureus
subsp. aureus N315]
dbj|BAB57454.1| (AP003361) conserved hypothetical protein [Staphylococcus aureus
subsp. aureus Mu50]
dbj|BAB95040.1| (AP004826) conserved hypotehtical protein [Staphylococcus aureus
subsp. aureus MW2]
Length = 514
Score = 288 bits (736), Expect = 1e-76
Identities = 166/427 (38%), Positives = 249/427 (57%), Gaps = 16/427 (3%)
Query: 5 IETMGCAMNSRDSEHLLSELSKLDYKETNDPKTADLILINTCSVREKPERKLFSEIGQFA 64
I+T GC MN+ D+E + L L Y+ T D TAD+ILINTC++RE E K+FSEIG
Sbjct: 72 IKTYGCQMNAHDTEVIAGILEALGYQATTDINTADVILINTCAIRENAENKVFSEIGNLK 131
Query: 65 KIKK--PNAKIGVCGCTASHMGA--DILKKAPSVSFVLGARNVSKISQVIHK---EKAVE 117
+KK P+ IGVCGC + ILK +V + G N+ + +++ + KA+
Sbjct: 132 HLKKERPDILIGVCGCMSQEESVVNKILKSYQNVDMIFGTHNIHHLPEILEEAYLSKAMV 191
Query: 118 VAIDYDESAYAFEFFEK--KAQIRSLLNISIGCDKKCAYCIVPHTRGKEISIPMDLILKE 175
V + + + E K + I++ +NI GCDK C YCIVP TRGKE S + I+ E
Sbjct: 192 VEV-WSKEGDVIENLPKVREGNIKAWVNIMYGCDKFCTYCIVPFTRGKERSRRPEDIIDE 250
Query: 176 AEKLANNGTKELMLLGQNVNNYGARFSSEHAKVDFSDLLDKLSEIQGIERIRFTSPHPLH 235
+LA G KE+ LLGQNVN+YG + + D DLL +S+I I R+RFT+ HP
Sbjct: 251 VRELAREGYKEITLLGQNVNSYGKDL--QDIEYDLGDLLQAISKI-AIPRVRFTTSHPWD 307
Query: 236 MNDGFLERFAKNPKVCKSIHMPLQSGSSAVLKMMRRGYSKEWFLNRVERLKALVPEVGIS 295
D ++ ++ + IH+P+QSG++AVLK+M R Y++E +L+ V+R+K +P V ++
Sbjct: 308 FTDHMIDVISEGGNIVPHIHLPVQSGNNAVLKIMGRKYTRESYLDLVKRIKDRIPNVALT 367
Query: 296 TDIIVGFPNESDKDFEDTMEVLEKVRFDTLYSFIYSPRPFTEAGAWKERVPLEVSSSRLE 355
TDIIVG+PNES++ FE+T+ + ++V F+ Y+++YS R T A K+ VPL V RL+
Sbjct: 368 TDIIVGYPNESEEQFEETLTLYDEVGFEHAYTYLYSQRDGTPAAKMKDNVPLNVKKERLQ 427
Query: 356 RLQNRHKEILEEKAKLEVGKTHVVLVENRREMDNQIVGFEGRSDTGKFIEVTCKEKRNPG 415
RL + + G+T VL E + D+Q++ G +D K + K G
Sbjct: 428 RLNKKVGHYSQIAMSKYEGQTVTVLCEGSSKKDDQVLA--GYTDKNKLVNFKA-PKEMIG 484
Query: 416 ELVKVEI 422
+LV+V I
Sbjct: 485 KLVEVRI 491
>ref|NP_603372.1| (NC_003454) MIAB protein [Fusobacterium nucleatum subsp. nucleatum
ATCC 25586]
gb|AAL94671.1| (AE010559) MIAB protein [Fusobacterium nucleatum subsp. nucleatum
ATCC 25586]
Length = 435
Score = 283 bits (725), Expect = 2e-75
Identities = 152/408 (37%), Positives = 238/408 (58%), Gaps = 10/408 (2%)
Query: 2 KVYIETMGCAMNSRDSEHLLSELSKLDYKETNDPKTADLILINTCSVREKPERKLFSEIG 61
K I T GC MN +S + L Y T + AD + +NTC+VRE ++F ++G
Sbjct: 3 KASIITYGCQMNVNESAKIKKIFQNLGYDVTEEIDNADAVFLNTCTVREGAATQIFGKLG 62
Query: 62 QFAKIK-KPNAKIGVCGCTASHMGADILKKAPSVSFVLGARNVSKISQVIHK----EKAV 116
+ +K K IGV GC A G +++KK P + V+G +N+ +I Q I K E
Sbjct: 63 ELKALKEKRGTIIGVTGCFAQEQGEELVKKFPIIDIVMGNQNIGRIPQAIEKIENNESTH 122
Query: 117 EVAIDYDESAYAFEFFEKKAQIRSLLNISIGCDKKCAYCIVPHTRGKEISIPMDLILKEA 176
EV D ++ E + + ++I+ GC+ C +CIVP+ RG+E S+P++ I+K+
Sbjct: 123 EVYTDNEDELPPRLDAEFGSDQTASISITYGCNNFCTFCIVPYVRGRERSVPLEEIVKDV 182
Query: 177 EKLANNGTKELMLLGQNVNNYGARFSSEHAKVDFSDLLDKLSEIQGIERIRFTSPHPLHM 236
E+ G KE++LLGQNVN+YG F + +F+ LLD++ +++G +RF SPHP
Sbjct: 183 EQYVKKGAKEIVLLGQNVNSYGKDFKNGD---NFAKLLDEICKVEGDYIVRFVSPHPRDF 239
Query: 237 NDGFLERFAKNPKVCKSIHMPLQSGSSAVLKMMRRGYSKEWFLNRVERLKALVPEVGIST 296
D +E AKN K+ K +H+PLQSGSS +LK MRRGY+KE +L V+++K+ +P V ++
Sbjct: 240 TDDVIEVIAKNKKISKCLHLPLQSGSSQILKKMRRGYTKEKYLALVDKIKSKIPGVALTA 299
Query: 297 DIIVGFPNESDKDFEDTMEVLEKVRFDTLYSFIYSPRPFTEAGAWKERVPLEVSSSRLER 356
DIIVGFP E+++DF DT++V++KV FD Y F+YS R T+A ++ V RL+R
Sbjct: 300 DIIVGFPGETEEDFLDTIDVVQKVSFDNSYMFMYSIRKGTKAATMDNQIEESVKKERLQR 359
Query: 357 LQNRHKEILEEKAKLEVGKTHVVLVENRREMDNQIVGFEGRSDTGKFI 404
L + ++ G+ VLVE + + +++ GR+ T K +
Sbjct: 360 LMEVQNKCSFYESSKYKGRIVKVLVEGPSKKNKEVL--SGRTSTNKIV 405
>ref|NP_348462.1| (NC_003030) Predicted Fe-S oxidoreductase, YMCB B.subtilis ortholog
[Clostridium acetobutylicum]
gb|AAK79802.1|AE007692_10 (AE007692) Predicted Fe-S oxidoreductase, YMCB B.subtilis ortholog
[Clostridium acetobutylicum]
Length = 441
Score = 281 bits (719), Expect = 1e-74
Identities = 159/427 (37%), Positives = 244/427 (56%), Gaps = 14/427 (3%)
Query: 4 YIETMGCAMNSRDSEHLLSELSKLDYKETNDPKTADLILINTCSVREKPERKLFSEIGQF 63
+IET GC MN+ DSE L L ++ Y+ T++ + ADLI+ NTC VRE E K++ +G
Sbjct: 8 FIETWGCQMNAEDSEKLAGMLKEMKYEATDNREDADLIIFNTCCVRENAELKVYGNLGTL 67
Query: 64 AKIK--KPNAKIGVCGCTASH--MGADILKKAPSVSFVLGARNVSKISQVIHKEKAVEVA 119
K+K KPN I VCGC M I K+ P V V+G N Q + K + +
Sbjct: 68 KKLKDKKPNLIITVCGCMMQQRDMAEHIKKRFPFVDIVMGTHNTQMFPQYLKKVENERTS 127
Query: 120 I----DYDESAYAFEFFEKKAQIRSLLNISIGCDKKCAYCIVPHTRGKEISIPMDLILKE 175
+ D +E + +++ + I GC+ C YCIVP+ RG+E S + I E
Sbjct: 128 VVEIWDKEEGIVEGMPIYRSYDMKAFVTIMYGCNNFCTYCIVPYVRGRERSRKPEDIENE 187
Query: 176 AEKLANNGTKELMLLGQNVNNYGARFSSEHAKVDFSDLLDKLSEIQGIERIRFTSPHPLH 235
++L G KE+ LLGQNVN+YG E ++F+ LL +L+ I+G+ RIRF + HP
Sbjct: 188 IKELVKKGYKEITLLGQNVNSYGKSLDEE---MNFALLLRRLNNIEGLLRIRFMTSHPKD 244
Query: 236 MNDGFLERFAKNPKVCKSIHMPLQSGSSAVLKMMRRGYSKEWFLNRVERLKALVPEVGIS 295
+ D + A KVC+ IH+P+QSGS+ +L M R Y++E ++N V ++K+ + V I+
Sbjct: 245 LTDDVIAAIADCDKVCEHIHLPVQSGSTTILNKMNRNYTREDYINLVNKIKSGIKNVAIT 304
Query: 296 TDIIVGFPNESDKDFEDTMEVLEKVRFDTLYSFIYSPRPFTEAGAWKERVPLEVSSSRLE 355
TDIIVGFP E+++DFEDT+ ++++V +D+ ++F+YS R T A ++ ++P EV R
Sbjct: 305 TDIIVGFPGETEEDFEDTLSLVKEVEYDSAFTFLYSIREGTPAAKYENQIPDEVKHKRFN 364
Query: 356 RLQNRHKEILEEKAKLEVGKTHVVLVENRREMDNQIVGFEGRSDTGKFIEVTCKEKRNPG 415
+L I E+K K GK +LVE + + D GR+ TGK + E + G
Sbjct: 365 KLLEAVNLISEKKNKEYEGKIVEILVEGKSKNDGS--KLMGRTRTGKLVNFEGLES-SIG 421
Query: 416 ELVKVEI 422
+L+ V+I
Sbjct: 422 KLINVKI 428
>ref|NP_601156.1| (NC_003450) COG0621:2-methylthioadenine synthetase [Corynebacterium
glutamicum]
Length = 526
Score = 281 bits (719), Expect = 1e-74
Identities = 157/436 (36%), Positives = 238/436 (54%), Gaps = 28/436 (6%)
Query: 5 IETMGCAMNSRDSEHLLSELSKLDYKETNDPKTADLILINTCSVREKPERKLFSEIGQFA 64
++T GC MN DSE L L + Y + T DL++ NTC+VRE + +L+ +G
Sbjct: 32 VKTYGCQMNVHDSERLSGLLEEAGYVAAPEDTTPDLVVFNTCAVRENADMRLYGTLGNLR 91
Query: 65 KIKK--PNAKIGVCGCTASHMGADILKKAPSVSFVLGARNVSKISQVI----HKEKAVEV 118
+K+ P +I V GC A ++KKAP V V G N+ + ++ H +A
Sbjct: 92 SVKEKNPGMQIAVGGCLAQKDKDTVVKKAPWVDVVFGTHNIGSLPTLLQRAEHNAQAEVE 151
Query: 119 AIDYDESAYAFEFFEKKAQIRSLLNISIGCDKKCAYCIVPHTRGKEISIPMDLILKEAEK 178
+D E + ++++ +++S+GC+ C +CIVP RGKE IL E +
Sbjct: 152 IVDSLEQFPSVLSAKRESAYAGWVSVSVGCNNTCTFCIVPSLRGKEQDRRPGDILAEVQA 211
Query: 179 LANNGTKELMLLGQNVNNYGARFSSEHAKVD---FSDLLDKLSEIQGIERIRFTSPHPLH 235
L + G E+ LLGQNVN YG F + D FS LL EI+G+ER+RFTSPHP
Sbjct: 212 LVDQGVTEVTLLGQNVNAYGVNFVDPELERDRSAFSKLLRACGEIEGLERVRFTSPHPAE 271
Query: 236 MNDGFLERFAKNPKVCKSIHMPLQSGSSAVLKMMRRGYSKEWFLNRVERLKALVPEVGIS 295
++ A+ P +C +HMPLQSGS VLK MRR Y + FL+ ++ ++A +P I+
Sbjct: 272 FTSDVIDAMAETPNICPQLHMPLQSGSDKVLKEMRRSYRSKKFLSILDEVRAKIPHASIT 331
Query: 296 TDIIVGFPNESDKDFEDTMEVLEKVRFDTLYSFIYSPRPFTEAGAWKERVPLEVSSSRLE 355
TDIIVGFP E+++DF+ T++V++K RF + Y+F YSPRP T A ++ ++P EV R E
Sbjct: 332 TDIIVGFPGETEEDFQATLDVVKKARFTSAYTFQYSPRPGTPAAEYENQLPKEVVQERYE 391
Query: 356 RLQNRHKEILEEKAKLEVGKTHVVLVE-------------NRREMDNQIVGF------EG 396
RL +++ EE+ + +G T +LV+ + R D ++V F +G
Sbjct: 392 RLMVVQEQVCEEENQKLIGTTVELLVQAGGGRKNDATKRMSGRARDGRLVHFAPEGDIDG 451
Query: 397 RSDTGKFIEVTCKEKR 412
G F+ VT E +
Sbjct: 452 EIRPGDFVTVTVTEAK 467
>dbj|BAB99342.1| (AP005280) 2-methylthioadenine synthetase [Corynebacterium
glutamicum ATCC 13032]
Length = 522
Score = 281 bits (719), Expect = 1e-74
Identities = 157/436 (36%), Positives = 238/436 (54%), Gaps = 28/436 (6%)
Query: 5 IETMGCAMNSRDSEHLLSELSKLDYKETNDPKTADLILINTCSVREKPERKLFSEIGQFA 64
++T GC MN DSE L L + Y + T DL++ NTC+VRE + +L+ +G
Sbjct: 28 VKTYGCQMNVHDSERLSGLLEEAGYVAAPEDTTPDLVVFNTCAVRENADMRLYGTLGNLR 87
Query: 65 KIKK--PNAKIGVCGCTASHMGADILKKAPSVSFVLGARNVSKISQVI----HKEKAVEV 118
+K+ P +I V GC A ++KKAP V V G N+ + ++ H +A
Sbjct: 88 SVKEKNPGMQIAVGGCLAQKDKDTVVKKAPWVDVVFGTHNIGSLPTLLQRAEHNAQAEVE 147
Query: 119 AIDYDESAYAFEFFEKKAQIRSLLNISIGCDKKCAYCIVPHTRGKEISIPMDLILKEAEK 178
+D E + ++++ +++S+GC+ C +CIVP RGKE IL E +
Sbjct: 148 IVDSLEQFPSVLSAKRESAYAGWVSVSVGCNNTCTFCIVPSLRGKEQDRRPGDILAEVQA 207
Query: 179 LANNGTKELMLLGQNVNNYGARFSSEHAKVD---FSDLLDKLSEIQGIERIRFTSPHPLH 235
L + G E+ LLGQNVN YG F + D FS LL EI+G+ER+RFTSPHP
Sbjct: 208 LVDQGVTEVTLLGQNVNAYGVNFVDPELERDRSAFSKLLRACGEIEGLERVRFTSPHPAE 267
Query: 236 MNDGFLERFAKNPKVCKSIHMPLQSGSSAVLKMMRRGYSKEWFLNRVERLKALVPEVGIS 295
++ A+ P +C +HMPLQSGS VLK MRR Y + FL+ ++ ++A +P I+
Sbjct: 268 FTSDVIDAMAETPNICPQLHMPLQSGSDKVLKEMRRSYRSKKFLSILDEVRAKIPHASIT 327
Query: 296 TDIIVGFPNESDKDFEDTMEVLEKVRFDTLYSFIYSPRPFTEAGAWKERVPLEVSSSRLE 355
TDIIVGFP E+++DF+ T++V++K RF + Y+F YSPRP T A ++ ++P EV R E
Sbjct: 328 TDIIVGFPGETEEDFQATLDVVKKARFTSAYTFQYSPRPGTPAAEYENQLPKEVVQERYE 387
Query: 356 RLQNRHKEILEEKAKLEVGKTHVVLVE-------------NRREMDNQIVGF------EG 396
RL +++ EE+ + +G T +LV+ + R D ++V F +G
Sbjct: 388 RLMVVQEQVCEEENQKLIGTTVELLVQAGGGRKNDATKRMSGRARDGRLVHFAPEGDIDG 447
Query: 397 RSDTGKFIEVTCKEKR 412
G F+ VT E +
Sbjct: 448 EIRPGDFVTVTVTEAK 463
>ref|NP_243238.1| (NC_002570) BH2372~unknown conserved protein [Bacillus halodurans]
dbj|BAB06091.1| (AP001515) BH2372~unknown conserved protein [Bacillus halodurans]
Length = 538
Score = 280 bits (715), Expect = 3e-74
Identities = 162/446 (36%), Positives = 254/446 (56%), Gaps = 35/446 (7%)
Query: 2 KVYIETMGCAMNSRDSEHLLSELSKLDYKETNDPKTADLILINTCSVREKPERKLFSEIG 61
K + T GC MN DSE++ L ++ ++ T++ AD+ILINTC++RE E K+F EIG
Sbjct: 96 KFLVRTYGCQMNIHDSENMAGMLKEMGFEATDETTDADVILINTCAIRENAENKVFGEIG 155
Query: 62 QFAKIK--KPNAKIGVCGCTASHMGA--DILKKAPSVSFVLGARNVSKISQVIH-----K 112
++K KP IGVCGC + G I++K + + G N+ ++ ++ K
Sbjct: 156 NLKQLKREKPELVIGVCGCMSQEEGVVNRIMQKHQHIDMIFGTHNIHRLPHLLRNALFGK 215
Query: 113 EKAVEVAIDYDESAYAFEFFEK--KAQIRSLLNISIGCDKKCAYCIVPHTRGKEISIPMD 170
E +EV + + E + + + ++ +NI GCDK C YCIVP+TRGKE S +
Sbjct: 216 EMIIEV---WSKEGDIVENMPRAREGKTQAWVNIMYGCDKFCTYCIVPYTRGKERSRRPE 272
Query: 171 LILKEAEKLANNGTKELMLLGQNVNNYGARFSSEHAKVDFS--DLLDKLSEIQGIERIRF 228
I++E LA G KE+ LLGQNVN YG + A +D+ DL+D++ +I I R+RF
Sbjct: 273 DIIQEVRDLARQGYKEITLLGQNVNAYG----KDLADLDYGLGDLMDEIRKID-IPRVRF 327
Query: 229 TSPHPLHMNDGFLERFAKNPKVCKSIHMPLQSGSSAVLKMMRRGYSKEWFLNRVERLKAL 288
T+ HP +D +E AK + + IH+P+Q G+S +LK+M R Y++E ++ +++K
Sbjct: 328 TTSHPRDFDDHLIEVLAKGGNLVEHIHLPVQHGNSEILKLMARKYTREQYVELAQKIKRA 387
Query: 289 VPEVGISTDIIVGFPNESDKDFEDTMEVLEKVRFDTLYSFIYSPRPFTEAGAWKERVPLE 348
+P +TD+IVGFPNE+D+ FEDT+ ++ ++ FD+ +++IYSPR T A K+ VP+E
Sbjct: 388 IPNASFTTDLIVGFPNETDEQFEDTLSLVREIEFDSAFTYIYSPREGTPAAKMKDNVPME 447
Query: 349 VSSSRLERLQNRHKEILEEKAKLEVGKTHVVLVENRREMD----------NQIVGFEG-R 397
V RL RL +I +K K VLVE + D N++V F+G +
Sbjct: 448 VKRERLARLNALVNDISAQKNLEYQDKVVEVLVEGESKKDPNILAGRTRTNRLVNFKGPK 507
Query: 398 SDTGKFIEVTCKEKRN---PGELVKV 420
S G + V E + GE+V++
Sbjct: 508 SVIGDIVYVKVTEAKTWSLNGEMVEM 533
>ref|NP_660758.1| (NC_004061) hypothetical 53.7 kD protein in cutE-glnX [Buchnera
aphidicola str. Sg (Schizaphis graminum)]
gb|AAM67969.1| (AE014118) hypothetical 53.7 kD protein in cutE-glnX [Buchnera
aphidicola str. Sg (Schizaphis graminum)]
Length = 439
Score = 280 bits (715), Expect = 3e-74
Identities = 170/438 (38%), Positives = 257/438 (57%), Gaps = 24/438 (5%)
Query: 3 VYIETMGCAMNSRDSEHLLSELSKLD-YKETNDPKTADLILINTCSVREKPERKLFSEIG 61
+YI+T GC MN DS + L K Y T + + AD++++NTCS+REK + K+F ++G
Sbjct: 4 IYIKTWGCQMNEYDSSMITVFLEKTGRYLITKEVEKADILILNTCSIREKAQEKVFHQLG 63
Query: 62 QFAKIK--KPNAKIGVCGCTASHMGADILKKAPSVSFVLGARNVSKISQVIHK-EKAVEV 118
++ K+K KP+ I V GC A+ G +I K+A V V G + + K++Q+I K EK
Sbjct: 64 RWKKLKNKKPDVIIAVGGCVATQEGKEIFKRANYVDIVFGTQTLHKLAQMIDKVEKNRRF 123
Query: 119 AIDYDE---SAYAFEFFEKKAQIRSLLNISIGCDKKCAYCIVPHTRGKEISIPMDLILKE 175
ID + + KK + ++I GC+K C++C+VP+TRG EIS P D IL E
Sbjct: 124 MIDISFPQLEKFNYSLEPKKTGYTASISIMEGCNKYCSFCVVPYTRGHEISRPSDDILLE 183
Query: 176 AEKLANNGTKELMLLGQNVNNYGARFSSEHAKVDF-SDLLDKLSEIQGIERIRFTSPHPL 234
LA NG +E+ LLGQNVN Y R + + K+ F S+LL +SEI GI+RIRFT+ +PL
Sbjct: 184 ISILAENGVREINLLGQNVNAYRGR--TFNGKICFFSELLRLVSEIDGIDRIRFTTSNPL 241
Query: 235 HMNDGFLERFAKNPKVCKSIHMPLQSGSSAVLKMMRRGYSKEWFLNRVERLKALVPEVGI 294
D +E + PK+ +H+P+QSGS+ +L++M+R Y+ E + +E+L + I
Sbjct: 242 EFTDDIIEVYQDTPKLVSFLHLPVQSGSNRILQLMKRSYTTEEYEKIIEKLILARSNIQI 301
Query: 295 STDIIVGFPNESDKDFEDTMEVLEKVRFDTLYSFIYSPRPFTEAGAWKERVPLEVSSSRL 354
S+D IVGFP+ES++DF+ T+ ++K+ FD +SFIYS RP T A K+ + L+ RL
Sbjct: 302 SSDFIVGFPSESEEDFQKTINFIKKINFDMSFSFIYSSRPGTPASEMKDNIDLQEKKKRL 361
Query: 355 ERLQNRHKEILEEKAKLEVGKTHVVLVE-----NRREM-----DNQIVGFEG-RSDTGKF 403
LQN + ++ + T VLVE N E+ +N+IV F+G GKF
Sbjct: 362 YTLQNCINKQTMSWSRKMLKSTQSVLVEGVSKKNIMELYGKTENNRIVTFKGSHKMIGKF 421
Query: 404 IEVTCKEKRN---PGELV 418
I++ K+ GEL+
Sbjct: 422 IKLKIKKVHTHSLQGELI 439
>ref|NP_406146.1| (NC_003143) putative tRNA-thiotransferase [Yersinia pestis]
emb|CAC92863.1| (AJ414153) putative tRNA-thiotransferase [Yersinia pestis]
Length = 474
Score = 278 bits (711), Expect = 9e-74
Identities = 160/425 (37%), Positives = 248/425 (57%), Gaps = 23/425 (5%)
Query: 2 KVYIETMGCAMNSRDSEHLLSELSKLD-YKETNDPKTADLILINTCSVREKPERKLFSEI 60
K++I+T GC MN DS + L+ Y+ T P+ ADL+L+NTCS+REK + K+FS +
Sbjct: 4 KLHIKTWGCQMNEYDSSKMADLLASTHGYQLTTIPEEADLLLLNTCSIREKAQEKVFSLL 63
Query: 61 GQFAKIKKPNAK--IGVCGCTASHMGADILKKAPSVSFVLGARNVSKISQVIHKEKAVEV 118
GQ+ +K+ N + IGV GC AS G + ++AP V + G + + ++ ++I+ +
Sbjct: 64 GQWKLLKEKNPQLIIGVGGCVASQEGEQLRQRAPCVDVIFGPQTLHRLPEMINHVQGTNS 123
Query: 119 AIDYDESAYAFEFFEKKAQIRS-----LLNISIGCDKKCAYCIVPHTRGKEISIPMDLIL 173
+ D S E F++ + R+ ++I GC+K C +C+VP+TRG+E+S P D IL
Sbjct: 124 PV-VDISFPEIEKFDRLPEPRAEGPTAFVSIMEGCNKYCTFCVVPYTRGEEVSRPSDDIL 182
Query: 174 KEAEKLANNGTKELMLLGQNVNNY-GARFSSEHAKVDFSDLLDKLSEIQGIERIRFTSPH 232
E +LA G +E+ LLGQNVN Y GA + + F++LL ++ I GI+R+RFT+ H
Sbjct: 183 FEIAQLAAQGVREVNLLGQNVNAYRGATYDGDICS--FAELLRLVAAIDGIDRVRFTTSH 240
Query: 233 PLHMNDGFLERFAKNPKVCKSIHMPLQSGSSAVLKMMRRGYSKEWFLNRVERLKALVPEV 292
P+ D ++ + P++ +H+P+QSGS +L MM+R ++ + + +L+ P++
Sbjct: 241 PIEFTDDIIDVYRDTPELVSFLHLPVQSGSDRILTMMKRAHTALEYKAIIRKLRQARPDI 300
Query: 293 GISTDIIVGFPNESDKDFEDTMEVLEKVRFDTLYSFIYSPRPFTEAGAWKERVPLEVSSS 352
IS+D IVGFP E+ +DFE TM+++ + FDT YSFIYSPRP T A V E
Sbjct: 301 QISSDFIVGFPGETQQDFEQTMKLVADIHFDTSYSFIYSPRPGTPAADLPNNVSEEEKKQ 360
Query: 353 RLERLQNRHKEILEEKAKLEVGKTHVVLVENR----------REMDNQIVGFEGRSD-TG 401
RL LQ R + E ++ VG VLVE R +N++V FEG D G
Sbjct: 361 RLHILQQRISQQAMEISRKMVGTVQRVLVEGTSRKNVMELAGRTENNRVVNFEGSPDMIG 420
Query: 402 KFIEV 406
KF++V
Sbjct: 421 KFVDV 425
>ref|NP_629911.1| (NC_003888) conserved hypothetical protein SC4H2.08 [Streptomyces
coelicolor A3(2)]
pir||T35107 hypothetical protein SC4H2.08 SC4H2.08 - Streptomyces coelicolor
emb|CAA18324.1| (AL022268) conserved hypothetical protein SC4H2.08 [Streptomyces
coelicolor A3(2)]
Length = 505
Score = 277 bits (708), Expect = 2e-73
Identities = 162/438 (36%), Positives = 235/438 (52%), Gaps = 13/438 (2%)
Query: 5 IETMGCAMNSRDSEHLLSELSKLDYKETNDPKT--ADLILINTCSVREKPERKLFSEIGQ 62
+ T GC MN DSE L L Y + AD+++ NTC+VRE + KL+ +G
Sbjct: 18 VRTYGCQMNVHDSERLSGLLEDAGYVRAPEGADGDADVVVFNTCAVRENADNKLYGNLGH 77
Query: 63 FA--KIKKPNAKIGVCGCTASHMGADILKKAPSVSFVLGARNVSKISQVIHKEKAVEVA- 119
A K +P +I V GC A I+K+AP V V G N+ K+ ++ + + E A
Sbjct: 78 LAPKKASRPGMQIAVGGCLAQKDRDTIVKRAPWVDVVFGTHNIGKLPVLLERARVQEEAQ 137
Query: 120 IDYDESAYAFEFF---EKKAQIRSLLNISIGCDKKCAYCIVPHTRGKEISIPMDLILKEA 176
++ ES AF +++ + ++IS+GC+ C +CIVP RGKE IL E
Sbjct: 138 VEIAESLEAFPSTLPTRRESAYAAWVSISVGCNNTCTFCIVPALRGKEKDRRPGDILAEV 197
Query: 177 EKLANNGTKELMLLGQNVNNYGARFSSEHAKVDFSDLLDKLSEIQGIERIRFTSPHPLHM 236
E L G E+ LLGQNVN YG+ A FS LL I G+ER+RFTSPHP
Sbjct: 198 EALVAEGVSEITLLGQNVNAYGSDIGDREA---FSKLLRACGNIDGLERVRFTSPHPRDF 254
Query: 237 NDGFLERFAKNPKVCKSIHMPLQSGSSAVLKMMRRGYSKEWFLNRVERLKALVPEVGIST 296
D + A+ P +HMPLQSGS VLK MRR Y +E +L +E+++A +P I+T
Sbjct: 255 TDDVIAAMAETPNAMPQLHMPLQSGSDPVLKAMRRSYRQERYLGIIEKVRAAIPHAAITT 314
Query: 297 DIIVGFPNESDKDFEDTMEVLEKVRFDTLYSFIYSPRPFTEAGAWKERVPLEVSSSRLER 356
DIIVGFP E+++DFE T+ V+ + RF ++F YS RP T A + ++P V R ER
Sbjct: 315 DIIVGFPGETEEDFEQTLHVVREARFAQAFTFQYSKRPGTPAAEMENQIPKAVVQERYER 374
Query: 357 LQNRHKEILEEKAKLEVGKT-HVVLVENRREMDNQIVGFEGRSDTGKFIEVTCKEKR-NP 414
L +EI ++ K +VG+T +++ E D GR+ + + T ++ P
Sbjct: 375 LVALQEEISWDENKKQVGRTLELMVAEGEGRKDGATHRLSGRAPDNRLVHFTKPDQEVRP 434
Query: 415 GELVKVEIISHSKGRLMA 432
G++V VEI + L+A
Sbjct: 435 GDVVTVEITYAAPHHLLA 452
>ref|NP_622974.1| (NC_003869) 2-methylthioadenine synthetase [Thermoanaerobacter
tengcongensis]
gb|AAM24578.1| (AE013095) 2-methylthioadenine synthetase [Thermoanaerobacter
tengcongensis]
Length = 471
Score = 277 bits (708), Expect = 2e-73
Identities = 164/439 (37%), Positives = 251/439 (56%), Gaps = 25/439 (5%)
Query: 4 YIETMGCAMNSRDSEHLLSELSKLDYKETNDPKTADLILINTCSVREKPERKLFSEIGQF 63
+IET GC MN DSE L L ++ YK T D + AD++L NTC+VRE E ++ + Q
Sbjct: 34 HIETYGCQMNVHDSEKLAGMLEEMGYKYTEDLEKADVLLFNTCAVREHAEVRVLGRVSQI 93
Query: 64 AKIKK--PNAKIGVCGCTAS--HMGADILKKAPSVSFVLGARNVSKIS----QVIHKEKA 115
++K PN IG+ GC H+ I +K P V V G N+ K Q ++
Sbjct: 94 KELKNRNPNLIIGISGCMMQEKHIVEAIREKYPHVDIVFGTHNIYKFPELLWQALNSRVQ 153
Query: 116 VEVAIDYDESAYAFEFFEKKAQIRSLLNISIGCDKKCAYCIVPHTRGKEISIPMDLILKE 175
V I+ ++ + + +++ +NI GC+ C YCIVP+TRG+E S + I+ E
Sbjct: 154 VIDVIENTQNVIEGLPIRRDSNLKAWVNIIYGCNNFCTYCIVPYTRGREKSRRPEDIIAE 213
Query: 176 AEKLANNGTKELMLLGQNVNNYGARFSSEHAKVDFSDLLDKLSEIQGIERIRFTSPHPLH 235
++LA G KE+ LLGQNVN+YG + ++F+ LL L++I+GIERIRF + HP
Sbjct: 214 VKELAEKGYKEITLLGQNVNSYGKDLGGD---INFAKLLYMLNDIKGIERIRFMTSHPKD 270
Query: 236 MNDGFLERFAKNPKVCKSIHMPLQSGSSAVLKMMRRGYSKEWFLNRVERLKALVPEVGIS 295
++D + KVC+ +H+P+Q+GS+ +LK M R Y++E +L +++++A +P++ I+
Sbjct: 271 ISDELIYAMRDLDKVCEHLHLPVQAGSNKILKRMNRRYTREHYLEIIDKVRANIPDIAIT 330
Query: 296 TDIIVGFPNESDKDFEDTMEVLEKVRFDTLYSFIYSPRPFTEAGAWKERVPLEVSSSRLE 355
TDIIVGFP E+++DF T++++E+VRFD Y+F+YS R T A + ++V EV RL
Sbjct: 331 TDIIVGFPGETEEDFFQTLDLVERVRFDGAYTFMYSKRAGTPAASMPDQVDDEVKKDRLI 390
Query: 356 RLQNRHKEILEEKAKLEVGKTHVVLVENRREMD----------NQIVGFEG-RSDTGKFI 404
RL +I EK+ GK VL+E + D N++V F G S GK
Sbjct: 391 RLIELQNKISLEKSAELKGKVVEVLIEGVSKRDPNKLTSRTRTNKVVHFIGDESLIGKLA 450
Query: 405 EVTCKEKR---NPGELVKV 420
V E + GELV+V
Sbjct: 451 NVKITETKAWTMQGELVEV 469
>ref|NP_384511.1| (NC_003047) CONSERVED HYPOTHETICAL PROTEIN [Sinorhizobium meliloti]
emb|CAC41842.1| (AL591783) CONSERVED HYPOTHETICAL PROTEIN [Sinorhizobium meliloti]
Length = 472
Score = 276 bits (705), Expect = 4e-73
Identities = 162/450 (36%), Positives = 252/450 (56%), Gaps = 21/450 (4%)
Query: 2 KVYIETMGCAMNSRDSEHLLSELSKLDYKETNDPKTADLILINTCSVREKPERKLFSEIG 61
KV+++T GC MN DS+ + LS+ Y T+ + AD +L+NTC +REK K++SE+G
Sbjct: 23 KVFVKTYGCQMNVYDSDRMSDALSRDGYVATDVLEDADFVLLNTCHIREKAAEKVYSELG 82
Query: 62 QFAKIKKPNAK------IGVCGCTASHMGADILKKAPSVSFVLGARNVSKISQVIHKEKA 115
+ ++KK A IGV GC A G +IL++ P+V V+G + ++ + + +A
Sbjct: 83 RLRELKKAKALEGREMLIGVAGCVAQAEGDEILRRVPAVDLVIGPQTYHRLPDALKRARA 142
Query: 116 VEVAIDYD---ESAYAFEFFEKKAQIRS-----LLNISIGCDKKCAYCIVPHTRGKEISI 167
+ ++ + E + KA+ R+ L + GCDK C +C+VP+TRG E+S
Sbjct: 143 GQRIVETEYAIEDKFVHLPAPDKAKTRARGVTAFLTVQEGCDKFCTFCVVPYTRGSEVSR 202
Query: 168 PMDLILKEAEKLANNGTKELMLLGQNVNNYGARFSSEHAKV-DFSDLLDKLSEIQGIERI 226
P+ I+ EAEKL G +E+ LLGQNVN + H + DLL +L EI G+ R+
Sbjct: 203 PVAQIVAEAEKLVEGGVREITLLGQNVNAWHGE--GPHGREWSLGDLLRRLGEIDGLARL 260
Query: 227 RFTSPHPLHMNDGFLERFAKNPKVCKSIHMPLQSGSSAVLKMMRRGYSKEWFLNRVERLK 286
R+T+ HP M+D +E K+ +H+P+QSGS +LK M R ++ +L VER++
Sbjct: 261 RYTTSHPRDMDDSLIEAHRSMAKLMPYLHLPVQSGSDRILKAMNRRHTAAEYLALVERIR 320
Query: 287 ALVPEVGISTDIIVGFPNESDKDFEDTMEVLEKVRFDTLYSFIYSPRPFTEAGAWKERVP 346
A P++ +S D IVGFP E+D+DFEDT+ ++E+V + +SF YS RP T KE+VP
Sbjct: 321 AAQPDLALSGDFIVGFPGETDQDFEDTLRLVEEVNYAQAFSFKYSTRPGTPGAELKEQVP 380
Query: 347 LEVSSSRLERLQNRHKEILEEKAKLEVGKTHVVLVENRREMDNQIVGFEGRSDTGKFIEV 406
+V + RLE LQ + A+ VG+ +L+E M Q+V GRS + + V
Sbjct: 381 EDVKAKRLEILQALLVKQQRGFAEACVGREIDLLLEKPGRMPGQLV---GRSPWLQPVNV 437
Query: 407 TCKEKRNPGELVKVEIISHSKGRLMAATKG 436
K + G++++V I L A G
Sbjct: 438 DAKASQ-IGDIIRVRITKAGPNSLFAEMIG 466
>ref|NP_230609.1| (NC_002505) conserved hypothetical protein [Vibrio cholerae]
pir||E82261 conserved hypothetical protein VC0962 [imported] - Vibrio cholerae
(group O1 strain N16961)
gb|AAF94124.1| (AE004177) conserved hypothetical protein [Vibrio cholerae]
Length = 474
Score = 275 bits (704), Expect = 6e-73
Identities = 160/442 (36%), Positives = 254/442 (57%), Gaps = 24/442 (5%)
Query: 2 KVYIETMGCAMNSRDSEHLLSELSKLD-YKETNDPKTADLILINTCSVREKPERKLFSEI 60
K+ I+T GC MN DS + L+ + Y+ T P+ AD++L+NTCS+REK + K+F ++
Sbjct: 4 KLLIKTWGCQMNEYDSSKMADLLNAANGYELTEIPEEADVLLLNTCSIREKAQEKVFHQL 63
Query: 61 GQFA--KIKKPNAKIGVCGCTASHMGADILKKAPSVSFVLGARNVSKISQVIHKEKAVEV 118
G++ K KKP IGV GC A+ G I +AP V + G + + ++ ++I + + +
Sbjct: 64 GRWKTLKDKKPGVVIGVGGCVATQEGDSIRDRAPYVDVIFGPQTLHRLPEMIKQSQTSDA 123
Query: 119 AIDYDESAYAFEFFEKKAQIRS-----LLNISIGCDKKCAYCIVPHTRGKEISIPMDLIL 173
+ D S E F++ + R+ ++I GC K C YC+VP+TRG+E+S PMD +L
Sbjct: 124 PV-MDISFPEIEKFDRLPEPRAEGPTAFVSIMEGCSKYCTYCVVPYTRGEEVSRPMDDVL 182
Query: 174 KEAEKLANNGTKELMLLGQNVNNYGARFSSEHAKVDFSDLLDKLSEIQGIERIRFTSPHP 233
E +LA G +E+ LLGQNVN Y + + F++LL ++ I GI+RIRFT+ HP
Sbjct: 183 FEIAQLAEQGVREVNLLGQNVNAYRGA-THDGGICSFAELLRLVATIDGIDRIRFTTSHP 241
Query: 234 LHMNDGFLERFAKNPKVCKSIHMPLQSGSSAVLKMMRRGYSKEWFLNRVERLKALVPEVG 293
L D + + P++ +H+P+QSGS +L MM+R ++ + + + +L+ P++
Sbjct: 242 LEFTDDIIAVYEDTPELVSFLHLPVQSGSDRILTMMKRPHTAIEYKSIIRKLRKARPDIQ 301
Query: 294 ISTDIIVGFPNESDKDFEDTMEVLEKVRFDTLYSFIYSPRPFTEAGAWKERVPLEVSSSR 353
IS+D IVGFP E+DKDF+DTM+++ V FD +SFI+SPRP T A + + EV R
Sbjct: 302 ISSDFIVGFPGETDKDFQDTMKLIRDVDFDMSFSFIFSPRPGTPAADYPCDLSEEVKKER 361
Query: 354 LERLQNRHKEILEEKAKLEVGKTHVVLVENRREMD----------NQIVGFEGRSD-TGK 402
L LQ + ++L +G +LVE + D N++V FEG D G+
Sbjct: 362 LYELQQQINSQAMRYSRLMLGTEQRILVEGPSKKDLMELRGRTENNRVVNFEGSPDLIGQ 421
Query: 403 FIEVTCKE---KRNPGELVKVE 421
F++V + GEL++ E
Sbjct: 422 FVDVKIVDVFPNSLRGELLRTE 443
>ref|NP_240253.1| (NC_002528) hypothetical protein [Buchnera sp. APS]
sp|P57516|Y441_BUCAI Hypothetical protein BU441
dbj|BAB13139.1| (AP001119) hypothetical protein [Buchnera sp. APS]
Length = 439
Score = 274 bits (700), Expect = 2e-72
Identities = 162/427 (37%), Positives = 251/427 (57%), Gaps = 21/427 (4%)
Query: 3 VYIETMGCAMNSRDSEHLLSELSKLD-YKETNDPKTADLILINTCSVREKPERKLFSEIG 61
+YI+T GC MN DS +++ L K + Y T + AD++++NTCS+REK + K+F ++G
Sbjct: 4 IYIKTWGCQMNEYDSSMIITLLEKNNQYSLTKSAENADILILNTCSIREKAQEKVFHQLG 63
Query: 62 QFAKIKKPNAK--IGVCGCTASHMGADILKKAPSVSFVLGARNVSKISQVIHK-EKAVEV 118
++ KIK N K I V GC A+ G +I K+A V + G + + ++ ++I + EK ++
Sbjct: 64 RWKKIKNNNPKVIIAVGGCVATQEGKEIFKRANYVDIIFGTQTLHRLPKMIDEVEKKRKL 123
Query: 119 AIDYD-ESAYAFEFF--EKKAQIRSLLNISIGCDKKCAYCIVPHTRGKEISIPMDLILKE 175
+ID F++F KK + ++I GC+K C++C+VP+TRG EIS P D +L E
Sbjct: 124 SIDISFPKLEKFKYFLAPKKKGYTADISIMEGCNKYCSFCVVPYTRGNEISRPCDDVLFE 183
Query: 176 AEKLANNGTKELMLLGQNVNNY-GARFSSEHAKVDFSDLLDKLSEIQGIERIRFTSPHPL 234
LA G KE+ LLGQNVN Y G F+ + FS+L+ ++EI GIERIRFT+ +PL
Sbjct: 184 ISLLAKQGIKEINLLGQNVNAYQGPTFNGKVCY--FSELIRLVAEIDGIERIRFTTSNPL 241
Query: 235 HMNDGFLERFAKNPKVCKSIHMPLQSGSSAVLKMMRRGYSKEWFLNRVERLKALVPEVGI 294
D +E + PK+ +H+P+QSGS+ +L +M+R Y+ E + + +++L P++ I
Sbjct: 242 EFTDDIIEVYKDTPKLVSFLHLPVQSGSNKILNLMKRSYTTEDYTSIIKKLTIARPDIQI 301
Query: 295 STDIIVGFPNESDKDFEDTMEVLEKVRFDTLYSFIYSPRPFTEAGAWKERVPLEVSSSRL 354
S+D IVGFP ES+ DFE T+E ++ + FD +SFIYS RP T A + + L+ RL
Sbjct: 302 SSDFIVGFPGESEIDFEKTIEFIKNINFDMSFSFIYSARPGTPASNMNDDLDLKEKKRRL 361
Query: 355 ERLQNRHKEILEEKAKLEVGKTHVVLVEN----------RREMDNQIVGFEGRSD-TGKF 403
LQ R ++ G VLVE R +N++V F+G S G+F
Sbjct: 362 YILQERINIQTMLWSRKMFGSIQSVLVEGVSDKNIMDLYGRTENNRVVTFQGSSKMIGQF 421
Query: 404 IEVTCKE 410
+ V K+
Sbjct: 422 VNVKIKK 428
>ref|NP_353388.1| (NC_003062) AGR_C_623p [Agrobacterium tumefaciens] [Agrobacterium
tumefaciens str. C58 (Cereon)]
gb|AAK86173.1| (AE007973) AGR_C_623p [Agrobacterium tumefaciens str. C58 (Cereon)]
Length = 467
Score = 273 bits (699), Expect = 2e-72
Identities = 166/453 (36%), Positives = 257/453 (56%), Gaps = 25/453 (5%)
Query: 2 KVYIETMGCAMNSRDSEHLLSELSKLDYKETNDPKTADLILINTCSVREKPERKLFSEIG 61
KV+I+T GC MN DS + L+K Y +T D ADL+L+NTC +REK K++S +G
Sbjct: 23 KVFIKTYGCQMNVYDSVRMSDALAKDGYVQTEDMGEADLVLLNTCHIREKAAEKVYSALG 82
Query: 62 QFAKIKKPNAK------IGVCGCTASHMGADILKKAPSVSFVLGARNVSKISQVIHKEKA 115
+ +KK + IGV GC A G +IL++AP+V V+G + ++ + + +
Sbjct: 83 RLRDMKKSREEQGREFMIGVAGCVAQAEGEEILRRAPAVDVVIGPQTYHRLPDALKRVRR 142
Query: 116 VEVAIDYDESAYAFEF-FE-----KKAQIRS-----LLNISIGCDKKCAYCIVPHTRGKE 164
E I E+ YA E FE +KA +RS L + GCDK C +C+VP+TRG E
Sbjct: 143 GERVI---ETEYAVEDKFEHLPVAEKATLRSRGVTAFLTVQEGCDKFCTFCVVPYTRGSE 199
Query: 165 ISIPMDLILKEAEKLANNGTKELMLLGQNVNNYGARFSSEHAKVDFSDLLDKLSEIQGIE 224
+S P+ I+ EA KL + G +E+ LLGQNVN + + K ++LL +L+EI G+
Sbjct: 200 VSRPVRQIVDEAMKLVDAGVREITLLGQNVNAWQGE-GPKGEKWGLAELLYRLAEIPGLA 258
Query: 225 RIRFTSPHPLHMNDGFLERFAKNPKVCKSIHMPLQSGSSAVLKMMRRGYSKEWFLNRVER 284
R+R+T+ HP M+D + + +H+P+QSGS +LK M R ++ E ++ +E+
Sbjct: 259 RLRYTTSHPRDMDDRLIGAHRDLRILMPYLHLPVQSGSDRILKAMNRRHTGEEYIQLIEK 318
Query: 285 LKALVPEVGISTDIIVGFPNESDKDFEDTMEVLEKVRFDTLYSFIYSPRPFTEAGAWKER 344
+++ P++ +S D IVGFP E+D+DFEDTM ++E V++ +SF YS RP T ++
Sbjct: 319 IRSARPDIAMSGDFIVGFPGETDRDFEDTMAMVETVKYAQAFSFKYSTRPGTPGADLTDQ 378
Query: 345 VPLEVSSSRLERLQNRHKEILEEKAKLEVGKTHVVLVENRREMDNQIVGFEGRSDTGKFI 404
V +V + RLERLQ +E A+ VGKT VL+E M Q++ GRS + +
Sbjct: 379 VAEDVKAERLERLQALLLRQQKEFAESLVGKTMDVLLEKPGRMPEQLI---GRSPWLQSV 435
Query: 405 EVTCKEKRNPGELVKVEIISHSKGRLMAATKGN 437
+ K + G++V V I + L A G+
Sbjct: 436 NLDAKTLK-IGDIVNVRITATGPNSLFAEVAGS 467
>ref|NP_440473.1| (NC_000911) hypothetical protein [Synechocystis sp. PCC 6803]
sp|P73127|Y996_SYNY3 Hypothetical protein sll0996
pir||S75239 hypothetical protein - Synechocystis sp. (strain PCC 6803)
dbj|BAA17153.1| (D90904) ORF_ID:sll0996~hypothetical protein [Synechocystis sp. PCC
6803]
Length = 451
Score = 273 bits (699), Expect = 2e-72
Identities = 152/433 (35%), Positives = 244/433 (56%), Gaps = 24/433 (5%)
Query: 2 KVYIETMGCAMNSRDSEHLLSELSKLDYKETNDPKTADLILINTCSVREKPERKLFSEIG 61
+ +I T GC MN DSE + L L T+DP ADL+L NTCS+R+ E+K++S +G
Sbjct: 7 RYHIITFGCQMNKADSERMAGILENLGMTYTDDPNQADLVLYNTCSIRDNAEQKVYSYLG 66
Query: 62 QFAKIKK--PNAKIGVCGCTASHMGADILKKAPSVSFVLGARNVSKISQVIHKEKAVEVA 119
+ AK K+ P + V GC A G +L++ P + V+G ++ +++ Q++ + A
Sbjct: 67 RQAKRKQVEPELTLVVAGCVAQQEGEQLLRRVPELDLVMGPQHANRLDQLLEQVWAGSQV 126
Query: 120 IDYDESAYAFEFFEK---KAQIRSLLNISIGCDKKCAYCIVPHTRGKEISIPMDLILKEA 176
+ ES + E K ++ + + +NI GC+++C+YC+VP+ RG E S + I E
Sbjct: 127 VA-TESLHIMEDITKPRRESTVSAWVNIIYGCNERCSYCVVPNVRGVEQSRTPEAIYGEM 185
Query: 177 EKLANNGTKELMLLGQNVNNYGARF-----SSEHAKVDFSDLLDKLSEIQGIERIRFTSP 231
E LA G KE+ LLGQN++ YG S H +DLL + +I+GI+R+RF +
Sbjct: 186 EVLAQQGFKEVTLLGQNIDAYGRDLPGTTPSGRHLHT-LTDLLYHVHDIEGIDRLRFATS 244
Query: 232 HPLHMNDGFLERFAKNPKVCKSIHMPLQSGSSAVLKMMRRGYSKEWFLNRVERLKALVPE 291
HP + + ++ + PKVC+ H+P QSG + +LK M+RGY++E +L +E+++ +P+
Sbjct: 245 HPRYFTERLIQACQELPKVCEHFHIPFQSGDNDILKAMKRGYTREKYLQIIEKIRRYMPD 304
Query: 292 VGISTDIIVGFPNESDKDFEDTMEVLEKVRFDTLYSFIYSPRPFTEAGAWKERVPLEVSS 351
IS D+IVGFP E++ FE+T+ ++E+V FD L + YSPRP T A W ++ EV
Sbjct: 305 AAISADVIVGFPGETEAQFENTLNLIEEVGFDLLNTAAYSPRPGTPAAFWDNQLSEEVKG 364
Query: 352 SRLERLQNRHKEILEEKAKLEVGKTHVVLVENR----------REMDNQIVGFEGRSD-- 399
RL+RL + E+++ +G+ VLVE R N++ F+G
Sbjct: 365 DRLQRLNHLVSTQAMERSQRYLGRVEEVLVEGENLKSPGQVMGRTRGNRLTFFQGEISEL 424
Query: 400 TGKFIEVTCKEKR 412
GK + V E R
Sbjct: 425 LGKTVPVKITEAR 437
>ref|NP_642776.1| (NC_003919) conserved hypothetical protein [Xanthomonas axonopodis
pv. citri str. 306]
gb|AAM37312.1| (AE011883) conserved hypothetical protein [Xanthomonas axonopodis
pv. citri str. 306]
Length = 452
Score = 273 bits (699), Expect = 2e-72
Identities = 153/405 (37%), Positives = 242/405 (58%), Gaps = 14/405 (3%)
Query: 2 KVYIETMGCAMNSRDSEHLLSELSKLDYKE-TNDPKTADLILINTCSVREKPERKLFSEI 60
K+YI+T GC MN DS + L+ + E T+DP+ AD++L+NTCS+REK + K+FS++
Sbjct: 5 KLYIKTHGCQMNEYDSAKMADVLAASEGLELTDDPEEADVVLVNTCSIREKAQEKVFSQL 64
Query: 61 GQFAKIK---KPNAKIGVCGCTASHMGADILKKAPSVSFVLGARNVSKISQVIHKEKAV- 116
G++ +K KP IGV GC AS G I+K+AP V V G + + ++ ++I +
Sbjct: 65 GRWKALKAGGKP-VIIGVGGCVASQEGEAIVKRAPYVDLVFGPQTLHRLPELIRARRESG 123
Query: 117 --EVAIDYDESAYAFEFFEKKAQIRS-LLNISIGCDKKCAYCIVPHTRGKEISIPMDLIL 173
+V I + E E +A+ S ++I GC K C++C+VP+TRG+E+S P + +L
Sbjct: 124 KSQVDISFPEIEKFDRLPEPRAEGPSAFVSIMEGCSKYCSFCVVPYTRGEEVSRPFEDVL 183
Query: 174 KEAEKLANNGTKELMLLGQNVNNYGARFSSEHAKV----DFSDLLDKLSEIQGIERIRFT 229
E +LA G +E+ LLGQNVN Y + ++ D L+ +++I+GI RIRFT
Sbjct: 184 VEVAQLAAQGVREINLLGQNVNAYRGAYGADAGDAAQYADLGLLIRTIAQIEGIGRIRFT 243
Query: 230 SPHPLHMNDGFLERFAKNPKVCKSIHMPLQSGSSAVLKMMRRGYSKEWFLNRVERLKALV 289
+ HPL +D ++ + P++ +H+P+Q+GS +L M+RGY+ F +++ +L+A+
Sbjct: 244 TSHPLEFSDSLVDAYRDVPQLANYLHLPVQAGSDRILSAMKRGYTALEFKSKIRKLRAVR 303
Query: 290 PEVGISTDIIVGFPNESDKDFEDTMEVLEKVRFDTLYSFIYSPRPFTEAGAWKERVPLEV 349
P++ IS+D IVGFP E++ DFE TM+++E V FD +SF+YS RP T A ++ P V
Sbjct: 304 PDISISSDFIVGFPGETEADFEKTMKLIEDVGFDQSFSFVYSRRPGTPASDLQDDTPEAV 363
Query: 350 SSSRLERLQNRHKEILEEKAKLEVGKTHVVLVENRREMD-NQIVG 393
+RL RLQ ++ VG VLVE D N++ G
Sbjct: 364 KQARLARLQAHINAHAASISQSMVGSVQRVLVEGPSRRDPNELTG 408
>ref|NP_531062.1| (NC_003304) miaB protein [Agrobacterium tumefaciens str. C58 (U.
Washington)]
gb|AAL41378.1| (AE009007) miaB protein [Agrobacterium tumefaciens str. C58 (U.
Washington)]
Length = 455
Score = 273 bits (699), Expect = 2e-72
Identities = 166/453 (36%), Positives = 257/453 (56%), Gaps = 25/453 (5%)
Query: 2 KVYIETMGCAMNSRDSEHLLSELSKLDYKETNDPKTADLILINTCSVREKPERKLFSEIG 61
KV+I+T GC MN DS + L+K Y +T D ADL+L+NTC +REK K++S +G
Sbjct: 11 KVFIKTYGCQMNVYDSVRMSDALAKDGYVQTEDMGEADLVLLNTCHIREKAAEKVYSALG 70
Query: 62 QFAKIKKPNAK------IGVCGCTASHMGADILKKAPSVSFVLGARNVSKISQVIHKEKA 115
+ +KK + IGV GC A G +IL++AP+V V+G + ++ + + +
Sbjct: 71 RLRDMKKSREEQGREFMIGVAGCVAQAEGEEILRRAPAVDVVIGPQTYHRLPDALKRVRR 130
Query: 116 VEVAIDYDESAYAFEF-FE-----KKAQIRS-----LLNISIGCDKKCAYCIVPHTRGKE 164
E I E+ YA E FE +KA +RS L + GCDK C +C+VP+TRG E
Sbjct: 131 GERVI---ETEYAVEDKFEHLPVAEKATLRSRGVTAFLTVQEGCDKFCTFCVVPYTRGSE 187
Query: 165 ISIPMDLILKEAEKLANNGTKELMLLGQNVNNYGARFSSEHAKVDFSDLLDKLSEIQGIE 224
+S P+ I+ EA KL + G +E+ LLGQNVN + + K ++LL +L+EI G+
Sbjct: 188 VSRPVRQIVDEAMKLVDAGVREITLLGQNVNAWQGE-GPKGEKWGLAELLYRLAEIPGLA 246
Query: 225 RIRFTSPHPLHMNDGFLERFAKNPKVCKSIHMPLQSGSSAVLKMMRRGYSKEWFLNRVER 284
R+R+T+ HP M+D + + +H+P+QSGS +LK M R ++ E ++ +E+
Sbjct: 247 RLRYTTSHPRDMDDRLIGAHRDLRILMPYLHLPVQSGSDRILKAMNRRHTGEEYIQLIEK 306
Query: 285 LKALVPEVGISTDIIVGFPNESDKDFEDTMEVLEKVRFDTLYSFIYSPRPFTEAGAWKER 344
+++ P++ +S D IVGFP E+D+DFEDTM ++E V++ +SF YS RP T ++
Sbjct: 307 IRSARPDIAMSGDFIVGFPGETDRDFEDTMAMVETVKYAQAFSFKYSTRPGTPGADLTDQ 366
Query: 345 VPLEVSSSRLERLQNRHKEILEEKAKLEVGKTHVVLVENRREMDNQIVGFEGRSDTGKFI 404
V +V + RLERLQ +E A+ VGKT VL+E M Q++ GRS + +
Sbjct: 367 VAEDVKAERLERLQALLLRQQKEFAESLVGKTMDVLLEKPGRMPEQLI---GRSPWLQSV 423
Query: 405 EVTCKEKRNPGELVKVEIISHSKGRLMAATKGN 437
+ K + G++V V I + L A G+
Sbjct: 424 NLDAKTLK-IGDIVNVRITATGPNSLFAEVAGS 455
>ref|NP_217249.1| (NC_000962) hypothetical protein Rv2733c [Mycobacterium
tuberculosis H37Rv]
sp|O33238|YR33_MYCTU Hypothetical protein Rv2733c
pir||D70506 hypothetical protein Rv2733c - Mycobacterium tuberculosis (strain
H37RV)
emb|CAB10909.1| (Z98209) hypothetical protein Rv2733c [Mycobacterium tuberculosis
H37Rv]
Length = 512
Score = 273 bits (698), Expect = 3e-72
Identities = 156/443 (35%), Positives = 240/443 (53%), Gaps = 19/443 (4%)
Query: 5 IETMGCAMNSRDSEHLLSELSKLDYKETNDPKTADLILINTCSVREKPERKLFSEIGQFA 64
+ T GC MN DSE L L Y+ D AD+++ NTC+VRE + +L+ + A
Sbjct: 29 VRTYGCQMNVHDSERLAGLLEAAGYRRATDGSEADVVVFNTCAVRENADNRLYGNLSHLA 88
Query: 65 KIKK--PNAKIGVCGCTASHMGADILKKAPSVSFVLGARNVSKISQVIHKEKAVEVAIDY 122
K+ P+ +I V GC A +L++AP V V G N+ + ++ + + +VA
Sbjct: 89 PRKRANPDMQIAVGGCLAQKDRDAVLRRAPWVDVVFGTHNIGSLPTLLERARHNKVA--Q 146
Query: 123 DESAYAFEFF------EKKAQIRSLLNISIGCDKKCAYCIVPHTRGKEISIPMDLILKEA 176
E A A + F +++ + ++IS+GC+ C +CIVP RG+E+ IL E
Sbjct: 147 VEIAEALQQFPSSLPSSRESAYAAWVSISVGCNNSCTFCIVPSLRGREVDRSPADILAEV 206
Query: 177 EKLANNGTKELMLLGQNVNNYGARFSSE---HAKVDFSDLLDKLSEIQGIERIRFTSPHP 233
L N+G E+ LLGQNVN YG F+ + F++LL +I G+ER+RFTSPHP
Sbjct: 207 RSLVNDGVLEVTLLGQNVNAYGVSFADPALPRNRGAFAELLRACGDIDGLERVRFTSPHP 266
Query: 234 LHMNDGFLERFAKNPKVCKSIHMPLQSGSSAVLKMMRRGYSKEWFLNRVERLKALVPEVG 293
D +E A+ VC ++HMPLQSGS +L+ MRR Y E +L +ER++A +P
Sbjct: 267 AEFTDDVIEAMAQTRNVCPALHMPLQSGSDRILRAMRRSYRAERYLGIIERVRAAIPHAA 326
Query: 294 ISTDIIVGFPNESDKDFEDTMEVLEKVRFDTLYSFIYSPRPFTEAGAWKERVPLEVSSSR 353
I+TD+IVGFP E+++DF T++V+ + RF ++F YS RP T A ++P V R
Sbjct: 327 ITTDLIVGFPGETEEDFAATLDVVRRARFAAAFTFQYSKRPGTPAAQLDGQLPKAVVQER 386
Query: 354 LERLQNRHKEILEEKAKLEVGKTHVVLV---ENRREMDNQIVGFEGRSDTGKFIEVTCKE 410
ERL ++I E + VG+ VLV E R+ D GR+ G+ + T +
Sbjct: 387 YERLIALQEQISLEANRALVGQAVEVLVATGEGRK--DTVTARMSGRARDGRLVHFTAGQ 444
Query: 411 KR-NPGELVKVEIISHSKGRLMA 432
R PG+++ ++ + L+A
Sbjct: 445 PRVRPGDVITTKVTEAAPHHLIA 467
>ref|NP_518652.1| (NC_003295) CONSERVED HYPOTHETICAL PROTEIN [Ralstonia solanacearum]
emb|CAD14059.1| (AL646059) CONSERVED HYPOTHETICAL PROTEIN [Ralstonia solanacearum]
Length = 457
Score = 273 bits (698), Expect = 3e-72
Identities = 151/414 (36%), Positives = 237/414 (56%), Gaps = 17/414 (4%)
Query: 2 KVYIETMGCAMNSRDSEHLLSELSKLD-YKETNDPKTADLILINTCSVREKPERKLFSEI 60
KV+I+T GC MN DS+ + L+ + T+ P+ AD+IL NTCSVREK + K+FS++
Sbjct: 3 KVFIKTFGCQMNEYDSDKMADVLNAAEGLVPTDTPEDADVILFNTCSVREKAQEKVFSDL 62
Query: 61 GQFAKIK--KPNAKIGVCGCTASHMGADILKKAPSVSFVLGARNVSKISQVIHKEKAV-- 116
G+ +K P+ +GV GC AS GA I+ +AP V V G + + ++ ++I +
Sbjct: 63 GRVKALKARNPDLVVGVGGCVASQEGASIVARAPYVDVVFGPQTLHRLPELIDARRRTGR 122
Query: 117 -EVAIDYDESAYAFEFFEKKAQIR-----SLLNISIGCDKKCAYCIVPHTRGKEISIPMD 170
+V + + E E F+ R + ++I GC K C+YC+VP+TRG+E+S P +
Sbjct: 123 PQVDVSFPE----IEKFDHLPPARVEGPSAFVSIMEGCSKYCSYCVVPYTRGEEVSRPFE 178
Query: 171 LILKEAEKLANNGTKELMLLGQNVNNYGARFSSEHAKVDFSDLLDKLSEIQGIERIRFTS 230
+L E LA G +E+ LLGQNVN Y + + DF+ LL+ ++EI GIERIR+T+
Sbjct: 179 DVLAEVAGLAEQGVREVTLLGQNVNAYIGKMGGTSERADFALLLEYVAEIPGIERIRYTT 238
Query: 231 PHPLHMNDGFLERFAKNPKVCKSIHMPLQSGSSAVLKMMRRGYSKEWFLNRVERLKALVP 290
HP +E +A N K+ +H+P+Q GS +L M+RGY+ + + + +L+A+ P
Sbjct: 239 SHPKEFTARLIEAYATNRKLVDHLHLPVQHGSDRILMAMKRGYTVLEYKSIIRKLRAIRP 298
Query: 291 EVGISTDIIVGFPNESDKDFEDTMEVLEKVRFDTLYSFIYSPRPFTEAGAWKERVPLEVS 350
++ I+TD IVGFP E+D DF TM+++ ++ +D +SFIYSPRP T A + P V
Sbjct: 299 DISIATDFIVGFPGETDADFAKTMDLVHEIGYDNSFSFIYSPRPGTPAANLHDDTPHAVK 358
Query: 351 SSRLERLQNRHKEILEEKAKLEVGKTHVVLVENRREMDNQIVGFEGRSDTGKFI 404
RL+ LQ + ++ VG +LVE D GR++ + +
Sbjct: 359 LERLKHLQATIDANMARISEGMVGSVQRILVEGPSRKDPS--ELHGRTENNRVV 410
>ref|NP_298196.1| (NC_002488) conserved hypothetical protein [Xylella fastidiosa
9a5c]
pir||F82747 conserved hypothetical protein XF0906 [imported] - Xylella
fastidiosa (strain 9a5c)
gb|AAF83716.1|AE003930_6 (AE003930) conserved hypothetical protein [Xylella fastidiosa 9a5c]
Length = 497
Score = 272 bits (695), Expect = 6e-72
Identities = 151/409 (36%), Positives = 242/409 (58%), Gaps = 17/409 (4%)
Query: 2 KVYIETMGCAMNSRDSEHLLSELSKLDYKE-TNDPKTADLILINTCSVREKPERKLFSEI 60
K++I+T GC MN DS + L+ + E T++P+ AD+ILINTCS+REK + K+FS++
Sbjct: 49 KLFIKTHGCQMNEYDSAKMADVLTTTEALELTDNPEEADIILINTCSIREKAQEKVFSQL 108
Query: 61 GQFAKIKKPNAK--IGVCGCTASHMGADILKKAPSVSFVLGARNVSKISQVIH---KEKA 115
G++ +K IGV GC AS G I+K+AP V V G + + ++ +I ++
Sbjct: 109 GRWRALKTSGRDVIIGVGGCVASQEGEAIVKRAPYVDLVFGPQTLHRLPDMIRARREQNR 168
Query: 116 VEVAIDYDESAYAFEFFEKKAQIRS-LLNISIGCDKKCAYCIVPHTRGKEISIPMDLILK 174
+V I + E +A+ S ++I GC K C++C+VP+TRG+E+S P + +L
Sbjct: 169 PQVDIRFPEIEKFDHLPTPRAEGPSAFVSIMEGCSKYCSFCVVPYTRGEEVSRPFEDVLT 228
Query: 175 EAEKLANNGTKELMLLGQNVNNY------GARFSSEHAKVDFSDL---LDKLSEIQGIER 225
E LA G +E+ LLGQNVN Y G ++ A ++DL + +++ + I R
Sbjct: 229 EIAHLATQGVREINLLGQNVNAYRGAMDPGPSNNTNPAPPPYADLGLLIRAIAQFESIGR 288
Query: 226 IRFTSPHPLHMNDGFLERFAKNPKVCKSIHMPLQSGSSAVLKMMRRGYSKEWFLNRVERL 285
IRFT+ HPL +D +E + P++ +H+P+QSGS +L M+RGY+ F +++ +L
Sbjct: 289 IRFTTSHPLEFSDSLVEAYRDVPQLANHLHLPVQSGSDRILSAMKRGYTALEFKSKIRKL 348
Query: 286 KALVPEVGISTDIIVGFPNESDKDFEDTMEVLEKVRFDTLYSFIYSPRPFTEAGAWKERV 345
+A+ P++ IS+D I+GFP ESD DF+ TM+++E + FD +SFIYS RP T A ++
Sbjct: 349 RAVRPDISISSDFIIGFPGESDTDFQKTMQLIEDIGFDQSFSFIYSRRPGTPASNLEDHT 408
Query: 346 PLEVSSSRLERLQNRHKEILEEKAKLEVGKTHVVLVEN-RREMDNQIVG 393
P E+ +RLE LQ + +K +G VLVE ++ N++ G
Sbjct: 409 PDEIKRTRLEHLQKHINTYAADISKRMIGTVQTVLVEGPSKKNPNELTG 457
>ref|NP_337308.1| (NC_002755) conserved hypothetical protein [Mycobacterium
tuberculosis CDC1551]
gb|AAK47122.1| (AE007108) conserved hypothetical protein [Mycobacterium
tuberculosis CDC1551]
Length = 512
Score = 272 bits (695), Expect = 6e-72
Identities = 156/443 (35%), Positives = 239/443 (53%), Gaps = 19/443 (4%)
Query: 5 IETMGCAMNSRDSEHLLSELSKLDYKETNDPKTADLILINTCSVREKPERKLFSEIGQFA 64
+ T GC MN DSE L L Y+ D AD+++ NTC+VRE + +L+ + A
Sbjct: 29 VRTYGCQMNVHDSERLAGLLEAAGYRRATDGSEADVVVFNTCAVRENADNRLYGNLSHLA 88
Query: 65 KIKK--PNAKIGVCGCTASHMGADILKKAPSVSFVLGARNVSKISQVIHKEKAVEVAIDY 122
K+ P+ +I V GC A +L +AP V V G N+ + ++ + + +VA
Sbjct: 89 PRKRANPDMQIAVGGCLAQKDRDAVLXRAPWVDVVFGTHNIGSLPTLLERARHNKVA--Q 146
Query: 123 DESAYAFEFF------EKKAQIRSLLNISIGCDKKCAYCIVPHTRGKEISIPMDLILKEA 176
E A A + F +++ + ++IS+GC+ C +CIVP RG+E+ IL E
Sbjct: 147 VEIAEALQQFPSSLPSSRESAYAAWVSISVGCNNSCTFCIVPSLRGREVDRSPADILAEV 206
Query: 177 EKLANNGTKELMLLGQNVNNYGARFSSE---HAKVDFSDLLDKLSEIQGIERIRFTSPHP 233
L N+G E+ LLGQNVN YG F+ + F++LL +I G+ER+RFTSPHP
Sbjct: 207 RSLVNDGVLEVTLLGQNVNAYGVSFADPALPRNRGAFAELLRACGDIDGLERVRFTSPHP 266
Query: 234 LHMNDGFLERFAKNPKVCKSIHMPLQSGSSAVLKMMRRGYSKEWFLNRVERLKALVPEVG 293
D +E A+ VC ++HMPLQSGS +L+ MRR Y E +L +ER++A +P
Sbjct: 267 AEFTDDVIEAMAQTRNVCPALHMPLQSGSDRILRAMRRSYRAERYLGIIERVRAAIPHAA 326
Query: 294 ISTDIIVGFPNESDKDFEDTMEVLEKVRFDTLYSFIYSPRPFTEAGAWKERVPLEVSSSR 353
I+TD+IVGFP E+++DF T++V+ + RF ++F YS RP T A ++P V R
Sbjct: 327 ITTDLIVGFPGETEEDFAATLDVVRRARFAAAFTFQYSKRPGTPAAQLDGQLPKAVVQER 386
Query: 354 LERLQNRHKEILEEKAKLEVGKTHVVLV---ENRREMDNQIVGFEGRSDTGKFIEVTCKE 410
ERL ++I E + VG+ VLV E R+ D GR+ G+ + T +
Sbjct: 387 YERLIALQEQISLEANRALVGQAVEVLVATGEGRK--DTVTARMSGRARDGRLVHFTAGQ 444
Query: 411 KR-NPGELVKVEIISHSKGRLMA 432
R PG+++ ++ + L+A
Sbjct: 445 PRVRPGDVITTKVTEAAPHHLIA 467
>ref|NP_637682.1| (NC_003902) conserved hypothetical protein [Xanthomonas campestris
pv. campestris str. ATCC 33913]
gb|AAM41606.1| (AE012340) conserved hypothetical protein [Xanthomonas campestris
pv. campestris str. ATCC 33913]
Length = 485
Score = 271 bits (694), Expect = 8e-72
Identities = 155/412 (37%), Positives = 247/412 (59%), Gaps = 28/412 (6%)
Query: 2 KVYIETMGCAMNSRDSEHLLSELSKLDYKE-TNDPKTADLILINTCSVREKPERKLFSEI 60
K+YI+T GC MN DS + L+ + E T++P+ AD++L+NTCS+REK + K+FS++
Sbjct: 38 KLYIKTHGCQMNEYDSAKMADVLAASEGLELTDNPEDADVVLVNTCSIREKAQEKVFSQL 97
Query: 61 GQFAKIK---KPNAKIGVCGCTASHMGADILKKAPSVSFVLGARNVSKISQVIHKEKAV- 116
G++ +K KP IGV GC AS G I+K+AP V V G + + ++ ++I +
Sbjct: 98 GRWKALKAGGKP-VIIGVGGCVASQEGEAIVKRAPYVDLVFGPQTLHRLPELIRARRESG 156
Query: 117 --EVAIDYDESAYAFEFFEKKAQIRS-----LLNISIGCDKKCAYCIVPHTRGKEISIPM 169
+V I + E E F++ + R+ ++I GC K C++C+VP+TRG+E+S P
Sbjct: 157 KSQVDISFPE----IEKFDRLPEPRADGPSAFVSIMEGCSKYCSFCVVPYTRGEEVSRPF 212
Query: 170 DLILKEAEKLANNGTKELMLLGQNVNNYGARFSSEHAK----VDFSDLLDKLSEIQGIER 225
+ +L E +LA G +E+ LLGQNVN Y + ++ + D L+ +++I GI R
Sbjct: 213 EDVLVEVAQLAAQGVREINLLGQNVNAYRGAYGADAGEPAQYADLGLLIRTIAQIDGIGR 272
Query: 226 IRFTSPHPLHMNDGFLERFAKNPKVCKSIHMPLQSGSSAVLKMMRRGYSKEWFLNRVERL 285
IRFT+ HPL +D ++ + P++ +H+P+Q+GS +L M+RGY+ F +++ +L
Sbjct: 273 IRFTTSHPLEFSDSLVDAYRDVPQLANYLHLPVQAGSDRILSAMKRGYTALEFKSKIRKL 332
Query: 286 KALVPEVGISTDIIVGFPNESDKDFEDTMEVLEKVRFDTLYSFIYSPRPFTEAGAWKERV 345
+A+ P++ IS+D IVGFP E+D DF+ TM+++E V FD +SFIYS RP T A ++
Sbjct: 333 RAVRPDISISSDFIVGFPGETDADFDKTMKLIEDVGFDQSFSFIYSRRPGTPASDLEDDT 392
Query: 346 PLEVSSSRLERLQ---NRHKEILEEKAKLEVGKTHVVLVENRREMD-NQIVG 393
P V +RL RLQ N H + ++ VG VLVE D N++ G
Sbjct: 393 PDAVKQARLARLQAHINAHAAGISQRM---VGSVQRVLVEGPSRRDANELTG 441
>ref|NP_360883.1| (NC_003103) unknown [Rickettsia conorii]
gb|AAL03784.1| (AE008671) unknown [Rickettsia conorii]
Length = 445
Score = 271 bits (692), Expect = 1e-71
Identities = 145/408 (35%), Positives = 242/408 (58%), Gaps = 21/408 (5%)
Query: 2 KVYIETMGCAMNSRDSEHLLSELSKLDYKETNDPKTADLILINTCSVREKPERKLFSEIG 61
K+YI+T GC MN DS + L Y+ T + + AD+I++NTC +REK K +SE+G
Sbjct: 4 KLYIKTYGCQMNVYDSVKMQDLLYPFGYEPTENIEEADVIILNTCHIREKAAEKTYSELG 63
Query: 62 QFAKIKKPNAKIG-------VCGCTASHMGADILKKAPSVSFVLGARNVSK----ISQVI 110
+ K++ K G V GC A G +I + P V V+G ++ IS+V+
Sbjct: 64 RIKKLQDTRTKQGLSSAIIVVAGCVAQAEGEEIFTRTPYVDIVVGPQSYYNLPELISKVV 123
Query: 111 HKEKAVEVAIDYDESAYAFEFFEK--KAQIRSLLNISIGCDKKCAYCIVPHTRGKEISIP 168
EK + + +D+ E A + E+ + +++ GCDK C +C+VP+TRG E S
Sbjct: 124 RHEKHL-IDLDFVEEAKFDQLPEQLYPQGTSAFISVQEGCDKFCTFCVVPYTRGAEFSRN 182
Query: 169 MDLILKEAEKLANNGTKELMLLGQNVNNYGARFSSEHAKVDFSDLLDKLSEIQGIERIRF 228
++ + +EA K+ ++G KE+MLLGQNVN Y + ++ +DLL L++I +ER+R+
Sbjct: 183 VEQVYREALKVVSSGAKEIMLLGQNVNAYHGKGPADKI-FSLADLLKHLAQIPNLERLRY 241
Query: 229 TSPHPLHMNDGFLERFAKNPKVCKSIHMPLQSGSSAVLKMMRRGYSKEWFLNRVERLKAL 288
T+ HP+ MN+ ++ + PK+ +H+P+QSGS+ +LK M R + +E++ + + RL+
Sbjct: 242 TTSHPIDMNNDLIKLYGTEPKLMPFLHLPVQSGSNKILKAMNRKHDREYYFDIINRLREA 301
Query: 289 VPEVGISTDIIVGFPNESDKDFEDTMEVLEKVRFDTLYSFIYSPRPFTEAGAWKERVPLE 348
P++ +S+D IVGFP E+D+DFEDT++++ +V++ YSF YSPRP T +++P
Sbjct: 302 RPDIVLSSDFIVGFPGETDEDFEDTLDLVRRVKYGQCYSFKYSPRPGTPGATRTDQIPEH 361
Query: 349 VSSSRLERLQNRHKEILEEKAKLE---VGKTHVVLVENRREMDNQIVG 393
+ S RL LQ +E++ ++ VG T VL + + D+QI+G
Sbjct: 362 IKSERLTILQ---QELMAQQLAFNTSCVGSTMKVLFDRNGKFDDQIIG 406
>ref|NP_245938.1| (NC_002663) unknown [Pasteurella multocida]
sp|Q9L699|YA01_PASMU Hypothetical protein PM1001
gb|AAF68426.1|AF237940_1 (AF237940) conserved hypothetical protein [Pasteurella multocida]
gb|AAK03085.1| (AE006140) unknown [Pasteurella multocida]
Length = 474
Score = 270 bits (691), Expect = 2e-71
Identities = 158/442 (35%), Positives = 256/442 (57%), Gaps = 24/442 (5%)
Query: 2 KVYIETMGCAMNSRDSEHLLSELSKLDYKE-TNDPKTADLILINTCSVREKPERKLFSEI 60
K++I+T GC MN DS + L+ E T P+ AD++L+NTCS+REK + K+F ++
Sbjct: 4 KLHIKTWGCQMNEYDSSKMADLLNSTHGLELTEIPEEADVLLLNTCSIREKAQEKVFHQL 63
Query: 61 GQFAKIKK--PNAKIGVCGCTASHMGADILKKAPSVSFVLGARNVSKISQVIHKEKAVEV 118
G++ ++KK P IGV GC AS G I +AP V + G + + ++ ++I++ + +
Sbjct: 64 GRWKELKKHKPGLVIGVGGCVASQEGEHIRTRAPYVDIIFGPQTLHRLPEMINQIRGGKS 123
Query: 119 AIDYDESAYAFEFFEKKAQIRS-----LLNISIGCDKKCAYCIVPHTRGKEISIPMDLIL 173
++ D S E F++ + R+ ++I GC+K C++C+VP+TRG+E+S P+D +L
Sbjct: 124 SV-VDVSFPEIEKFDRLPEPRAEGPTAFVSIMEGCNKYCSFCVVPYTRGEEVSRPVDDVL 182
Query: 174 KEAEKLANNGTKELMLLGQNVNNYGARFSSEHAKVDFSDLLDKLSEIQGIERIRFTSPHP 233
E +LA G +E+ LLGQNVN Y + + F++LL ++ I GI+R+RFT+ HP
Sbjct: 183 FEIAQLAEQGVREVNLLGQNVNAYRGA-THDDGICTFAELLRLVAAIDGIDRLRFTTSHP 241
Query: 234 LHMNDGFLERFAKNPKVCKSIHMPLQSGSSAVLKMMRRGYSKEWFLNRVERLKALVPEVG 293
+ D ++ + P++ +H+P+QSGS VL MM+R ++ + + + +L+A+ PE+
Sbjct: 242 IEFTDDIIDVYRDTPELVSFLHLPVQSGSDRVLSMMKRNHTALEYKSIIRKLRAVRPEIQ 301
Query: 294 ISTDIIVGFPNESDKDFEDTMEVLEKVRFDTLYSFIYSPRPFTEAGAWKERVPLEVSSSR 353
IS+D IVGFP E+ +DFE TM ++ +V FD +SFIYS RP T A + V E R
Sbjct: 302 ISSDFIVGFPGETAEDFEQTMNLIAQVNFDMSFSFIYSARPGTPAADMPDDVTEEEKKQR 361
Query: 354 LERLQNRHKEILEEKAKLEVGKTHVVLVENRREMD----------NQIVGFEGRSD-TGK 402
L LQ R + ++ +G VLVE + D N+IV F G D GK
Sbjct: 362 LYVLQQRINNQAAQFSRAMLGTEQRVLVEGPSKKDLMELTGRTETNRIVNFVGTPDMIGK 421
Query: 403 FIEVTCKE---KRNPGELVKVE 421
F+++ + GE+V+ E
Sbjct: 422 FVDIKITDVFTNSLRGEVVRTE 443
>ref|NP_438192.1| (NC_000907) conserved hypothetical protein [Haemophilus influenzae
Rd]
sp|Q57163|YLEA_HAEIN Hypothetical protein HI0019
pir||D64140 conserved hypothetical protein HI0019 - Haemophilus influenzae
gb|AAC21697.1| (U32687) conserved hypothetical protein [Haemophilus influenzae Rd]
Length = 474
Score = 268 bits (685), Expect = 9e-71
Identities = 156/443 (35%), Positives = 259/443 (58%), Gaps = 26/443 (5%)
Query: 2 KVYIETMGCAMNSRDSEHLLSELSKLDYKE-TNDPKTADLILINTCSVREKPERKLFSEI 60
K++I+T GC MN DS + L E T P+ AD++L+NTCS+REK + K+F ++
Sbjct: 4 KLHIKTWGCQMNEYDSSKMADLLLSTHGLELTEAPEEADVLLLNTCSIREKAQEKVFHQL 63
Query: 61 GQFAKIKK--PNAKIGVCGCTASHMGADILKKAPSVSFVLGARNVSKISQVIHKEKAVEV 118
G++ ++KK PN IGV GC AS G I +AP V + G + + ++ ++I++ + +
Sbjct: 64 GRWKELKKNNPNLVIGVGGCVASQEGEHIRHRAPYVDIIFGPQTLHRLPEMINQIRGGKS 123
Query: 119 AIDYDESAYAFEFFEKKAQIRS-----LLNISIGCDKKCAYCIVPHTRGKEISIPMDLIL 173
++ D S E F++ + R+ ++I GC+K C +C+VP+TRG+E+S P+D +L
Sbjct: 124 SV-VDVSFPEIEKFDRLPEPRAEGPTAFVSIMEGCNKYCTFCVVPYTRGEEVSRPVDDVL 182
Query: 174 KEAEKLANNGTKELMLLGQNVNNYGARFSSEHAKV-DFSDLLDKLSEIQGIERIRFTSPH 232
E +LA G +E+ LLGQNVN Y R + ++ F++LL ++ I GI+R+RFT+ H
Sbjct: 183 FEIAQLAEQGVREVNLLGQNVNAY--RGPTHDGQICSFAELLRLVASIDGIDRLRFTTSH 240
Query: 233 PLHMNDGFLERFAKNPKVCKSIHMPLQSGSSAVLKMMRRGYSKEWFLNRVERLKALVPEV 292
P+ D ++ + P++ +H+P+Q+GS VL MM+R ++ + + + +L+A+ P++
Sbjct: 241 PIEFTDDIIDVYRDTPELVSFLHLPVQAGSDRVLTMMKRAHTALEYKSIIRKLRAVRPDI 300
Query: 293 GISTDIIVGFPNESDKDFEDTMEVLEKVRFDTLYSFIYSPRPFTEAGAWKERVPLEVSSS 352
IS+D IVGFP E+ +DFE TM ++ +V FD +SF+YS RP T A + V +
Sbjct: 301 QISSDFIVGFPGETAEDFEQTMNLIAQVNFDMSFSFVYSARPGTPAADMPDDVTEDEKKQ 360
Query: 353 RLERLQNRHKEILEEKAKLEVGKTHVVLVENRREMD----------NQIVGFEGRSD-TG 401
RL LQ R + + ++ +G VLVE + D N+IV F+G + G
Sbjct: 361 RLYVLQERINQQAAQFSRRMLGTEQRVLVEGPSKKDIMELTGRTETNRIVNFQGSPEMIG 420
Query: 402 KFIEVTCKE---KRNPGELVKVE 421
KF++V + GE+V+ E
Sbjct: 421 KFVDVKITDVYTNSLRGEVVRTE 443
>ref|NP_283403.1| (NC_003116) hypothetical protein NMA0590 [Neisseria meningitidis
Z2491]
pir||C81978 hypothetical protein NMA0590 [imported] - Neisseria meningitidis
(group A strain Z2491)
emb|CAB83881.1| (AL162753) hypothetical protein NMA0590 [Neisseria meningitidis
Z2491]
Length = 442
Score = 267 bits (683), Expect = 2e-70
Identities = 159/421 (37%), Positives = 238/421 (55%), Gaps = 29/421 (6%)
Query: 2 KVYIETMGCAMNSRDSEHLLSELSKLD--YKETNDPKTADLILINTCSVREKPERKLFSE 59
KV+I T GC MN DS+ +L+ L++ ++ AD+IL NTCSVREK + K+FS+
Sbjct: 3 KVFIRTFGCQMNEYDSDKMLAVLAEEHGGIEQVTQADEADIILFNTCSVREKAQEKVFSD 62
Query: 60 IGQFA--KIKKPNAKIGVCGCTASHMGADILKKAPSVSFVLGARNVSKISQVIHKEKAVE 117
+G+ K KKP IGV GC AS G +I+K+AP V V G + + ++ ++I +K
Sbjct: 63 LGRVRPLKEKKPGLIIGVAGCVASQEGENIIKRAPYVDVVFGPQTLHRLPKMI-VDKETS 121
Query: 118 VAIDYDESAYAFEFFEKKAQIR-----SLLNISIGCDKKCAYCIVPHTRGKEISIPMDLI 172
D S E F+ R + ++I GC K C++C+VP+TRG+E S P++ +
Sbjct: 122 GLSQVDISFPEIEKFDHLPPARVEGGAAFVSIMEGCSKYCSFCVVPYTRGEEFSRPLNDV 181
Query: 173 LKEAEKLANNGTKELMLLGQNVNNYGARFSSEHAKVDFSDLLDKLSEIQGIERIRFTSPH 232
L E LA G KE+ LLGQNVN Y DF+ LL + EI GIER+RFT+ H
Sbjct: 182 LTEIANLAQQGVKEINLLGQNVNAYRGEMDDGEI-CDFATLLRIVHEIPGIERMRFTTSH 240
Query: 233 PLHMNDGFLERFAKNPKVCKSIHMPLQSGSSAVLKMMRRGYSKEWFLNRVERLKALVPEV 292
P D +E + PK+ +H+P+QSGS VL M+RGY+ + + + +L+A+ P++
Sbjct: 241 PREFTDSIIECYRDLPKLVSHLHLPIQSGSDRVLSAMKRGYTALEYKSIIRKLRAIRPDL 300
Query: 293 GISTDIIVGFPNESDKDFEDTMEVLEKVRFDTLYSFIYSPRPFTEAGAWKERVPLEVSSS 352
+S+D IVGFP E++++FE T+++++ + FD + FIYSPRP T A + P E
Sbjct: 301 CLSSDFIVGFPGETEREFEQTLKLVKDIAFDLSFVFIYSPRPGTPAANLHDDTPHEEKVR 360
Query: 353 RLERLQNRHKEILE-EKAKLE---VGKTHVVLVE----------NRREMDNQIVGFEGRS 398
RLE L E++E E A++ +G LVE R +N++V F G
Sbjct: 361 RLEAL----NEVIEAETARINQTMIGTVQRCLVEGISKKDPDQLQARTANNRVVNFTGTP 416
Query: 399 D 399
D
Sbjct: 417 D 417
>ref|NP_274862.1| (NC_003112) conserved hypothetical protein [Neisseria meningitidis
MC58]
pir||C81034 conserved hypothetical protein NMB1866 [imported] - Neisseria
meningitidis (group B strain MD58)
gb|AAF42200.1| (AE002536) conserved hypothetical protein [Neisseria meningitidis
MC58]
Length = 442
Score = 266 bits (679), Expect = 5e-70
Identities = 158/421 (37%), Positives = 238/421 (56%), Gaps = 29/421 (6%)
Query: 2 KVYIETMGCAMNSRDSEHLLSELSKLD--YKETNDPKTADLILINTCSVREKPERKLFSE 59
KV+I T GC MN DS+ +L+ L++ ++ AD+IL NTCSVREK + K+FS+
Sbjct: 3 KVFIRTFGCQMNEYDSDKMLAVLAEEHGGIEQVTQADEADIILFNTCSVREKAQEKVFSD 62
Query: 60 IGQFAKIKK--PNAKIGVCGCTASHMGADILKKAPSVSFVLGARNVSKISQVIHKEKAVE 117
+G+ +K+ P IGV GC AS G +I+K+AP V V G + + ++ ++I +K
Sbjct: 63 LGRVRPLKEKNPGLIIGVAGCVASQEGENIIKRAPYVDVVFGPQTLHRLPKMI-VDKETS 121
Query: 118 VAIDYDESAYAFEFFEKKAQIR-----SLLNISIGCDKKCAYCIVPHTRGKEISIPMDLI 172
D S E F+ R + ++I GC K C++C+VP+TRG+E S P++ +
Sbjct: 122 GLSQVDISFPEIEKFDHLPPARVEGGAAFVSIMEGCSKYCSFCVVPYTRGEEFSRPLNDV 181
Query: 173 LKEAEKLANNGTKELMLLGQNVNNYGARFSSEHAKVDFSDLLDKLSEIQGIERIRFTSPH 232
L E LA G KE+ LLGQNVN Y DF+ LL + EI GIER+RFT+ H
Sbjct: 182 LTEIANLAQQGVKEINLLGQNVNAYRGEMDDGEI-CDFATLLRIVHEIPGIERMRFTTSH 240
Query: 233 PLHMNDGFLERFAKNPKVCKSIHMPLQSGSSAVLKMMRRGYSKEWFLNRVERLKALVPEV 292
P D +E + PK+ +H+P+QSGS VL M+RGY+ + + + +L+A+ P++
Sbjct: 241 PREFTDSIIECYRDLPKLVSHLHLPIQSGSDRVLSAMKRGYTALEYKSIIRKLRAIRPDL 300
Query: 293 GISTDIIVGFPNESDKDFEDTMEVLEKVRFDTLYSFIYSPRPFTEAGAWKERVPLEVSSS 352
+S+D IVGFP E++++FE T+++++ + FD + FIYSPRP T A + P E
Sbjct: 301 CLSSDFIVGFPGETEREFEQTLKLVKDIAFDLSFVFIYSPRPGTPAANLPDDTPHEEKVR 360
Query: 353 RLERLQNRHKEILE-EKAKLE---VGKTHVVLVE----------NRREMDNQIVGFEGRS 398
RLE L E++E E A++ VG LVE R +N++V F G
Sbjct: 361 RLEAL----NEVIEAETARINQTMVGTVQRCLVEGISKKDPDQLQARTANNRVVNFTGTP 416
Query: 399 D 399
D
Sbjct: 417 D 417
>ref|NP_485355.1| (NC_003272) hypothetical protein [Nostoc sp. PCC 7120]
dbj|BAB73269.1| (AP003585) ORF_ID:alr1312~hypothetical protein [Nostoc sp. PCC
7120]
Length = 454
Score = 263 bits (673), Expect = 2e-69
Identities = 139/406 (34%), Positives = 235/406 (57%), Gaps = 13/406 (3%)
Query: 2 KVYIETMGCAMNSRDSEHLLSELSKLDYKETNDPKTADLILINTCSVREKPERKLFSEIG 61
+ +I T GC MN DSE + L + +K + DP ADLIL NTC++R+ E+K++S +G
Sbjct: 7 RYHITTFGCQMNKADSERMAGILEDMGFKFSEDPNNADLILYNTCTIRDNAEQKVYSYLG 66
Query: 62 QFAKIK--KPNAKIGVCGCTASHMGADILKKAPSVSFVLGARNVSKISQVIHKEKAVEVA 119
+ AK K +P+ + V GC A G +L++ P + V+G ++ +++ ++ A
Sbjct: 67 RQAKRKHEQPDLTLVVAGCVAQQEGEALLRRVPELDLVMGPQHANRLKDLLESVFAGNQV 126
Query: 120 IDYDESAYAFEFF---EKKAQIRSLLNISIGCDKKCAYCIVPHTRGKEISIPMDLILKEA 176
+ E+ + E + + + + +N+ GC+++C YC+VP+ RG E S + E
Sbjct: 127 VA-TEAVHIMEDITQARRDSTVTAWVNVIYGCNERCTYCVVPNVRGVEQSRTPAAVRAEM 185
Query: 177 EKLANNGTKELMLLGQNVNNYG-----ARFSSEHAKVDFSDLLDKLSEIQGIERIRFTSP 231
E+L G KE+ LLGQN++ YG A H F+DLL + ++ G+ERIRF +
Sbjct: 186 EELGRQGYKEITLLGQNIDAYGRDLPGATPEGRHLHT-FTDLLYYVHDVPGVERIRFATS 244
Query: 232 HPLHMNDGFLERFAKNPKVCKSIHMPLQSGSSAVLKMMRRGYSKEWFLNRVERLKALVPE 291
HP + + ++ A+ PKVC+ H+P QSG + +LK M RGY++E + ++ ++ +P+
Sbjct: 245 HPRYFTERLIKACAELPKVCEHFHIPFQSGDNQLLKAMARGYTQEKYRRIIDTIRRYMPD 304
Query: 292 VGISTDIIVGFPNESDKDFEDTMEVLEKVRFDTLYSFIYSPRPFTEAGAWKERVPLEVSS 351
IS D IVGFP E+++ FE+T+++++ + FD L + YSPRP T A W+ ++ EV S
Sbjct: 305 ASISADAIVGFPGETEEQFENTLKLVDDIGFDQLNTAAYSPRPGTPAALWENQLSEEVKS 364
Query: 352 SRLERLQNRHKEILEEKAKLEVGKTHVVLVENRREMD-NQIVGFEG 396
RL+RL + E+++ +G+ VLVE + D Q++G G
Sbjct: 365 DRLQRLNHLVNVKAAERSQRYMGRIEEVLVEEQNPKDQTQVMGRTG 410
>ref|NP_540893.1| (NC_003317) MIAB PROTEIN [Brucella melitensis]
gb|AAL53157.1| (AE009631) MIAB PROTEIN [Brucella melitensis]
Length = 467
Score = 263 bits (673), Expect = 2e-69
Identities = 154/448 (34%), Positives = 241/448 (53%), Gaps = 25/448 (5%)
Query: 2 KVYIETMGCAMNSRDSEHLLSELSKLDYKETNDPKTADLILINTCSVREKPERKLFSEIG 61
KV+++T GC MN DS+ + L+ Y T+ P ADL+L+NTC +REK KL+S +G
Sbjct: 24 KVFVKTYGCQMNVYDSQRMADSLAAEGYVATDTPDDADLVLLNTCHIREKASEKLYSALG 83
Query: 62 QFAKIKKPNAK------IGVCGCTASHMGADILKKAPSVSFVLGARNVSKISQVIHKEKA 115
+ K+K A IGV GC A G +IL++AP+V V+G + ++ + + +
Sbjct: 84 RLRKMKDARAADGKELTIGVAGCVAQAEGQEILRRAPNVDLVIGPQTYHRLPNALARVRG 143
Query: 116 VEVAIDYDESAYAFEF-FE----------KKAQIRSLLNISIGCDKKCAYCIVPHTRGKE 164
E ++ D YA E FE +K + + L + GCDK C +C+VP+TRG E
Sbjct: 144 GEKVVETD---YAIEDKFEHLPAPRREETRKRGVSAFLTVQEGCDKFCTFCVVPYTRGSE 200
Query: 165 ISIPMDLILKEAEKLANNGTKELMLLGQNVNNYGARFSSEHAKVDFSDLLDKLSEIQGIE 224
+S + I+ EAE+LA++G +EL LLGQNVN + + + +LL +L+ I GI
Sbjct: 201 VSRSVKQIVAEAERLADSGVRELTLLGQNVNAWHGE-GEDGREWGLGELLFRLARIPGIA 259
Query: 225 RIRFTSPHPLHMNDGFLERFAKNPKVCKSIHMPLQSGSSAVLKMMRRGYSKEWFLNRVER 284
+R+T+ HP M+D + ++ +H+P+QSGS +LK M R + + +L +ER
Sbjct: 260 HLRYTTSHPRDMDDSLIAAHRDLRQLMPYLHLPVQSGSDRILKAMNRRHKADEYLRLIER 319
Query: 285 LKALVPEVGISTDIIVGFPNESDKDFEDTMEVLEKVRFDTLYSFIYSPRPFTEAGAWKER 344
++ + P++ +S D IVGFP E+D+DFEDTM+++ V + YSF YSPRP T +
Sbjct: 320 IRNVRPDMALSGDFIVGFPGETDQDFEDTMQLVRDVNYAQAYSFKYSPRPGTPGADLDDH 379
Query: 345 VPLEVSSSRLERLQNRHKEILEEKAKLEVGKTHVVLVENRREMDNQIVGFEGRSDTGKFI 404
V V RL+RLQ +G+ VL+E Q+VG
Sbjct: 380 VEEAVKDERLQRLQALLSAQQYAFQDSMIGRKMDVLLEKPGREAGQMVG----RSPWLLP 435
Query: 405 EVTCKEKRNPGELVKVEIISHSKGRLMA 432
+ K G+++ V+I+S L+A
Sbjct: 436 VIIDDNKDRVGDIIHVKIVSTGTNSLIA 463
>ref|NP_308726.1| (NC_002695) hypothetical protein [Escherichia coli O157:H7]
ref|NP_415194.1| (NC_000913) orf, hypothetical protein [Escherichia coli K12]
sp|P77645|YLEA_ECOLI Hypothetical protein yleA
pir||C64801 yleA protein - Escherichia coli
gb|AAB40863.1| (U82598) HI0019 homolog [Escherichia coli]
gb|AAC73762.1| (AE000170) orf, hypothetical protein [Escherichia coli K12]
dbj|BAB34122.1| (AP002552) hypothetical protein [Escherichia coli O157:H7]
Length = 474
Score = 261 bits (668), Expect = 9e-69
Identities = 155/424 (36%), Positives = 244/424 (56%), Gaps = 21/424 (4%)
Query: 2 KVYIETMGCAMNSRDSEHLLSELSKLD-YKETNDPKTADLILINTCSVREKPERKLFSEI 60
K++I+T GC MN DS + L Y+ T+ + AD++L+NTCS+REK + K+F ++
Sbjct: 4 KLHIKTWGCQMNEYDSSKMADLLDATHGYQLTDVAEEADVLLLNTCSIREKAQEKVFHQL 63
Query: 61 GQFA--KIKKPNAKIGVCGCTASHMGADILKKAPSVSFVLGARNVSKISQVIHKEKAVEV 118
G++ K K P+ IGV GC AS G I ++A V + G + + ++ ++I+ +
Sbjct: 64 GRWKLLKEKNPDLIIGVGGCVASQEGEHIRQRAHYVDIIFGPQTLHRLPEMINSVRGDRS 123
Query: 119 AIDYDESAYAFEFFEKKAQIRS-----LLNISIGCDKKCAYCIVPHTRGKEISIPMDLIL 173
+ D S E F++ + R+ ++I GC+K C YC+VP+TRG+E+S P D IL
Sbjct: 124 PV-VDISFPEIEKFDRLPEPRAEGPTAFVSIMEGCNKYCTYCVVPYTRGEEVSRPSDDIL 182
Query: 174 KEAEKLANNGTKELMLLGQNVNNYGARFSSEHAKVDFSDLLDKLSEIQGIERIRFTSPHP 233
E +LA G +E+ LLGQNVN + + + F+DLL ++ I GI+RIRFT+ HP
Sbjct: 183 FEIAQLAAQGVREVNLLGQNVNAWRGE-NYDGTTGSFADLLRLVAAIDGIDRIRFTTSHP 241
Query: 234 LHMNDGFLERFAKNPKVCKSIHMPLQSGSSAVLKMMRRGYSKEWFLNRVERLKALVPEVG 293
+ D +E + P++ +H+P+QSGS +L +M R ++ + + +L+A P++
Sbjct: 242 IEFTDDIIEVYRDTPELVSFLHLPVQSGSDRILNLMGRTHTALEYKAIIRKLRAARPDIQ 301
Query: 294 ISTDIIVGFPNESDKDFEDTMEVLEKVRFDTLYSFIYSPRPFTEAGAWKERVPLEVSSSR 353
IS+D IVGFP E+ +DFE TM+++ V FD YSFI+S RP T A + VP E R
Sbjct: 302 ISSDFIVGFPGETTEDFEKTMKLIADVNFDMSYSFIFSARPGTPAADMVDDVPEEEKKQR 361
Query: 354 LERLQNRHKEILEEKAKLEVGKTHVVLVE----------NRREMDNQIVGFEGRSD-TGK 402
L LQ R + ++ +G T +LVE + R +N++V FEG D GK
Sbjct: 362 LYILQERINQQAMAWSRRMLGTTQRILVEGTSRKSIMELSGRTENNRVVNFEGTPDMIGK 421
Query: 403 FIEV 406
F++V
Sbjct: 422 FVDV 425
>ref|NP_286386.1| (NC_002655) orf, hypothetical protein [Escherichia coli O157:H7
EDL933]
gb|AAG54994.1|AE005245_3 (AE005245) orf, hypothetical protein [Escherichia coli O157:H7
EDL933]
Length = 474
Score = 261 bits (667), Expect = 1e-68
Identities = 155/424 (36%), Positives = 243/424 (56%), Gaps = 21/424 (4%)
Query: 2 KVYIETMGCAMNSRDSEHLLSELSKLD-YKETNDPKTADLILINTCSVREKPERKLFSEI 60
K++I+T GC MN DS + L Y+ T+ + AD++L+NTCS+REK + K+F ++
Sbjct: 4 KLHIKTWGCQMNEYDSSKMADLLDATHGYQLTDVAEEADVLLLNTCSIREKAQEKVFHQL 63
Query: 61 GQFA--KIKKPNAKIGVCGCTASHMGADILKKAPSVSFVLGARNVSKISQVIHKEKAVEV 118
G++ K K P+ IGV GC AS G I ++A V + G + + ++ ++I+ +
Sbjct: 64 GRWKLLKEKNPDLIIGVGGCVASQEGEHIRQRAHYVDIIFGPQTLHRLPEMINSVRGDRS 123
Query: 119 AIDYDESAYAFEFFEKKAQIRS-----LLNISIGCDKKCAYCIVPHTRGKEISIPMDLIL 173
+ D S E F++ + R+ ++I GC+K C YC+VP+TRG+E+S P D IL
Sbjct: 124 PV-VDISFPEIEKFDRLPEPRAEGPTAFVSIMEGCNKYCTYCVVPYTRGEEVSRPSDDIL 182
Query: 174 KEAEKLANNGTKELMLLGQNVNNYGARFSSEHAKVDFSDLLDKLSEIQGIERIRFTSPHP 233
E +LA G +E+ LLGQNVN + + + F+DLL ++ I GI+RIRFT+ HP
Sbjct: 183 FEIAQLAAQGVREVNLLGQNVNAWRGE-NYDGTTGSFADLLRLVAAIDGIDRIRFTTSHP 241
Query: 234 LHMNDGFLERFAKNPKVCKSIHMPLQSGSSAVLKMMRRGYSKEWFLNRVERLKALVPEVG 293
+ D +E + P++ +H+P+QSGS +L +M R ++ + + +L+A P++
Sbjct: 242 IEFTDDIIEVYRDTPELVSFLHLPVQSGSDRILNLMGRTHTALEYKAIIRKLRAARPDIQ 301
Query: 294 ISTDIIVGFPNESDKDFEDTMEVLEKVRFDTLYSFIYSPRPFTEAGAWKERVPLEVSSSR 353
IS+D IVGFP E+ +DFE TM+++ V FD YSFI+S RP T A + VP E R
Sbjct: 302 ISSDFIVGFPGETTEDFEKTMKLIADVNFDMSYSFIFSARPGTPAADMVDDVPEEEKKQR 361
Query: 354 LERLQNRHKEILEEKAKLEVGKTHVVLVE----------NRREMDNQIVGFEGRSD-TGK 402
L LQ R + + +G T +LVE + R +N++V FEG D GK
Sbjct: 362 LYILQERINQQAMAWXRRMLGTTQRILVEGTSRKSIMELSGRTENNRVVNFEGTPDMIGK 421
Query: 403 FIEV 406
F++V
Sbjct: 422 FVDV 425
>ref|NP_455239.1| (NC_003198) MiaB protein (putative tRNA-thiotransferase (or
tRNA-methylthiotransferase)) [Salmonella enterica subsp.
enterica serovar Typhi]
emb|CAD05141.1| (AL627267) MiaB protein (putative tRNA-thiotransferase (or
tRNA-methylthiotransferase)) [Salmonella enterica subsp.
enterica serovar Typhi]
Length = 488
Score = 259 bits (662), Expect = 4e-68
Identities = 155/424 (36%), Positives = 243/424 (56%), Gaps = 21/424 (4%)
Query: 2 KVYIETMGCAMNSRDSEHLLSELSKLD-YKETNDPKTADLILINTCSVREKPERKLFSEI 60
K++I+T GC MN DS + L Y+ T+ + AD++L+NTCS+REK + K+F ++
Sbjct: 18 KLHIKTWGCQMNEYDSSKMADLLDATHGYQLTDVAEEADVLLLNTCSIREKAQEKVFHQL 77
Query: 61 GQFA--KIKKPNAKIGVCGCTASHMGADILKKAPSVSFVLGARNVSKISQVIHKEKAVEV 118
G++ K K P+ IGV GC AS G I ++A V + G + + ++ ++I+ +
Sbjct: 78 GRWRLLKEKNPDLIIGVGGCVASQEGEHIRQRAHYVDIIFGPQTLHRLPEMINSVRGDRS 137
Query: 119 AIDYDESAYAFEFFEKKAQIRS-----LLNISIGCDKKCAYCIVPHTRGKEISIPMDLIL 173
+ D S E F++ + R+ ++I GC+K C YC+VP+TRG+E+S P D IL
Sbjct: 138 PV-VDISFPEIEKFDRLPEPRAEGPTAFVSIMEGCNKYCTYCVVPYTRGEEVSRPSDDIL 196
Query: 174 KEAEKLANNGTKELMLLGQNVNNYGARFSSEHAKVDFSDLLDKLSEIQGIERIRFTSPHP 233
E +LA G +E+ LLGQNVN + + + F+DLL ++ I GI+RIRFT+ HP
Sbjct: 197 FEIAQLAAQGVREVNLLGQNVNAWRGE-NYDGTTGTFADLLRLVAAIDGIDRIRFTTSHP 255
Query: 234 LHMNDGFLERFAKNPKVCKSIHMPLQSGSSAVLKMMRRGYSKEWFLNRVERLKALVPEVG 293
+ D +E + P++ +H+P+QSGS VL +M R ++ + + +L+A P++
Sbjct: 256 IEFTDDIIEVYRDTPELVSFLHLPVQSGSDRVLNLMGRTHTALEYKAIIRKLRAARPDIQ 315
Query: 294 ISTDIIVGFPNESDKDFEDTMEVLEKVRFDTLYSFIYSPRPFTEAGAWKERVPLEVSSSR 353
IS+D IVGFP E+ DFE TM+++ V FD YSFI+S RP T A + VP E R
Sbjct: 316 ISSDFIVGFPGETTDDFEKTMKLIADVNFDMSYSFIFSARPGTPAADMVDDVPEEEKKQR 375
Query: 354 LERLQNRHKEILEEKAKLEVGKTHVVLVE----------NRREMDNQIVGFEGRSD-TGK 402
L LQ R + ++ +G T +LVE + R +N++V FEG + GK
Sbjct: 376 LYILQERINQQAMAWSRRMLGTTQRILVEGTSRKNIMELSGRTENNRVVNFEGTPEMIGK 435
Query: 403 FIEV 406
F++V
Sbjct: 436 FVDV 439
>ref|NP_301734.1| (NC_002677) conserved hypothetical protein [Mycobacterium leprae]
sp|Q49842|YR33_MYCLE Hypothetical protein ML0989
emb|CAC31370.1| (AL583920) conserved hypothetical protein [Mycobacterium leprae]
Length = 517
Score = 259 bits (662), Expect = 4e-68
Identities = 155/449 (34%), Positives = 240/449 (52%), Gaps = 25/449 (5%)
Query: 5 IETMGCAMNSRDSEHLLSELSKLDYKETNDPKT---ADLILINTCSVREKPERKLFSEIG 61
+ T GC MN DSE L L Y+ D AD+++ NTC+VRE + +L+ +
Sbjct: 22 VRTYGCQMNVHDSERLAGLLEAAGYQRAADEADVGDADVVVFNTCAVRENADNRLYGNLS 81
Query: 62 QFAKIKK--PNAKIGVCGCTASHMGADILKKAPSVSFVLGARNVSKISQVIHKEKAVEVA 119
A K+ P+ +I V GC A +L KAP V V G N+ + ++ + + +VA
Sbjct: 82 HLAPRKRNNPDMQIAVGGCLAQKDKHTVLSKAPWVDIVFGTHNLGSLPTLLDRARHNKVA 141
Query: 120 IDYDESAYAFEFFE------KKAQIRSLLNISIGCDKKCAYCIVPHTRGKEISIPMDLIL 173
E A + F +++ + ++IS+GC+ C +CIVP RGKE+ IL
Sbjct: 142 --QVEIVEALQHFPSSLPSARESDYAAWVSISVGCNNSCTFCIVPSLRGKEVDRSPADIL 199
Query: 174 KEAEKLANNGTKELMLLGQNVNNYGARFSSE---HAKVDFSDLLDKLSEIQGIERIRFTS 230
E E L +G E+ LLGQNVN YG F+ + F++LL I G+ER+RFTS
Sbjct: 200 AEVEALVADGVLEVTLLGQNVNAYGVSFADPALARNRGSFAELLRSCGSIDGLERVRFTS 259
Query: 231 PHPLHMNDGFLERFAKNPKVCKSIHMPLQSGSSAVLKMMRRGYSKEWFLNRVERLKALVP 290
PHP +E A+ P VC S+HMPLQSGS VL+ MRR Y E +L + +++A +P
Sbjct: 260 PHPAEFTYDVIEAMAQTPNVCPSLHMPLQSGSDRVLRAMRRSYRVERYLGIIGQVRAAMP 319
Query: 291 EVGISTDIIVGFPNESDKDFEDTMEVLEKVRFDTLYSFIYSPRPFTEAGAWKERVPLEVS 350
I+TD+IVGFP E+++DF T++V+ +VRF ++F YS RP T A ++P V
Sbjct: 320 HAAITTDLIVGFPGETEEDFAATLDVVRQVRFTAAFTFQYSKRPGTPAAELGGQLPKAVV 379
Query: 351 SSRLERLQNRHKEILEEKAKLEVGKTHVVLV---ENRREMDNQIVGFEGRSDTGKFI--- 404
R ERL ++I E+ ++ +G+ +LV E R+ D + GR+ G+ +
Sbjct: 380 QERYERLVELQEQICMEENRVLIGRIVELLVTTGEGRK--DARTARRTGRARDGRLVHFA 437
Query: 405 -EVTCKEKRNPGELVKVEIISHSKGRLMA 432
+ + + PG+++ V + + L+A
Sbjct: 438 LDTPWEAQVRPGDIITVMVTEAAPHHLIA 466
>pir||S72937 hypothetical protein B2235_C2_195 - Mycobacterium leprae
gb|AAA17273.1| (U00019) B2235_C2_195 [Mycobacterium leprae]
Length = 516
Score = 259 bits (662), Expect = 4e-68
Identities = 155/449 (34%), Positives = 240/449 (52%), Gaps = 25/449 (5%)
Query: 5 IETMGCAMNSRDSEHLLSELSKLDYKETNDPKT---ADLILINTCSVREKPERKLFSEIG 61
+ T GC MN DSE L L Y+ D AD+++ NTC+VRE + +L+ +
Sbjct: 21 VRTYGCQMNVHDSERLAGLLEAAGYQRAADEADVGDADVVVFNTCAVRENADNRLYGNLS 80
Query: 62 QFAKIKK--PNAKIGVCGCTASHMGADILKKAPSVSFVLGARNVSKISQVIHKEKAVEVA 119
A K+ P+ +I V GC A +L KAP V V G N+ + ++ + + +VA
Sbjct: 81 HLAPRKRNNPDMQIAVGGCLAQKDKHTVLSKAPWVDIVFGTHNLGSLPTLLDRARHNKVA 140
Query: 120 IDYDESAYAFEFFE------KKAQIRSLLNISIGCDKKCAYCIVPHTRGKEISIPMDLIL 173
E A + F +++ + ++IS+GC+ C +CIVP RGKE+ IL
Sbjct: 141 --QVEIVEALQHFPSSLPSARESDYAAWVSISVGCNNSCTFCIVPSLRGKEVDRSPADIL 198
Query: 174 KEAEKLANNGTKELMLLGQNVNNYGARFSSE---HAKVDFSDLLDKLSEIQGIERIRFTS 230
E E L +G E+ LLGQNVN YG F+ + F++LL I G+ER+RFTS
Sbjct: 199 AEVEALVADGVLEVTLLGQNVNAYGVSFADPALARNRGSFAELLRSCGSIDGLERVRFTS 258
Query: 231 PHPLHMNDGFLERFAKNPKVCKSIHMPLQSGSSAVLKMMRRGYSKEWFLNRVERLKALVP 290
PHP +E A+ P VC S+HMPLQSGS VL+ MRR Y E +L + +++A +P
Sbjct: 259 PHPAEFTYDVIEAMAQTPNVCPSLHMPLQSGSDRVLRAMRRSYRVERYLGIIGQVRAAMP 318
Query: 291 EVGISTDIIVGFPNESDKDFEDTMEVLEKVRFDTLYSFIYSPRPFTEAGAWKERVPLEVS 350
I+TD+IVGFP E+++DF T++V+ +VRF ++F YS RP T A ++P V
Sbjct: 319 HAAITTDLIVGFPGETEEDFAATLDVVRQVRFTAAFTFQYSKRPGTPAAELGGQLPKAVV 378
Query: 351 SSRLERLQNRHKEILEEKAKLEVGKTHVVLV---ENRREMDNQIVGFEGRSDTGKFI--- 404
R ERL ++I E+ ++ +G+ +LV E R+ D + GR+ G+ +
Sbjct: 379 QERYERLVELQEQICMEENRVLIGRIVELLVTTGEGRK--DARTARRTGRARDGRLVHFA 436
Query: 405 -EVTCKEKRNPGELVKVEIISHSKGRLMA 432
+ + + PG+++ V + + L+A
Sbjct: 437 LDTPWEAQVRPGDIITVMVTEAAPHHLIA 465
>ref|NP_459662.1| (NC_003197) methylthiolation of isopentenylated A37 derivatives in
rRNA [Salmonella typhimurium LT2]
emb|CAB62263.1| (AJ249116) MiaB protein [Salmonella typhimurium]
gb|AAL19621.1| (AE008727) methylthiolation of isopentenylated A37 derivatives in
rRNA [Salmonella typhimurium LT2]
Length = 474
Score = 259 bits (662), Expect = 4e-68
Identities = 155/424 (36%), Positives = 243/424 (56%), Gaps = 21/424 (4%)
Query: 2 KVYIETMGCAMNSRDSEHLLSELSKLD-YKETNDPKTADLILINTCSVREKPERKLFSEI 60
K++I+T GC MN DS + L Y+ T+ + AD++L+NTCS+REK + K+F ++
Sbjct: 4 KLHIKTWGCQMNEYDSSKMADLLDATHGYQLTDVAEEADVLLLNTCSIREKAQEKVFHQL 63
Query: 61 GQFA--KIKKPNAKIGVCGCTASHMGADILKKAPSVSFVLGARNVSKISQVIHKEKAVEV 118
G++ K K P+ IGV GC AS G I ++A V + G + + ++ ++I+ +
Sbjct: 64 GRWRLLKEKNPDLIIGVGGCVASQEGEHIRQRAHYVDIIFGPQTLHRLPEMINSVRGDRS 123
Query: 119 AIDYDESAYAFEFFEKKAQIRS-----LLNISIGCDKKCAYCIVPHTRGKEISIPMDLIL 173
+ D S E F++ + R+ ++I GC+K C YC+VP+TRG+E+S P D IL
Sbjct: 124 PV-VDISFPEIEKFDRLPEPRAEGPTAFVSIMEGCNKYCTYCVVPYTRGEEVSRPSDDIL 182
Query: 174 KEAEKLANNGTKELMLLGQNVNNYGARFSSEHAKVDFSDLLDKLSEIQGIERIRFTSPHP 233
E +LA G +E+ LLGQNVN + + + F+DLL ++ I GI+RIRFT+ HP
Sbjct: 183 FEIAQLAAQGVREVNLLGQNVNAWRGE-NYDGTTGTFADLLRLVAAIDGIDRIRFTTSHP 241
Query: 234 LHMNDGFLERFAKNPKVCKSIHMPLQSGSSAVLKMMRRGYSKEWFLNRVERLKALVPEVG 293
+ D +E + P++ +H+P+QSGS VL +M R ++ + + +L+A P++
Sbjct: 242 IEFTDDIIEVYRDTPELVSFLHLPVQSGSDRVLNLMGRTHTALEYKAIIRKLRAARPDIQ 301
Query: 294 ISTDIIVGFPNESDKDFEDTMEVLEKVRFDTLYSFIYSPRPFTEAGAWKERVPLEVSSSR 353
IS+D IVGFP E+ DFE TM+++ V FD YSFI+S RP T A + VP E R
Sbjct: 302 ISSDFIVGFPGETTDDFEKTMKLIADVNFDMSYSFIFSARPGTPAADMVDDVPEEEKKQR 361
Query: 354 LERLQNRHKEILEEKAKLEVGKTHVVLVE----------NRREMDNQIVGFEGRSD-TGK 402
L LQ R + ++ +G T +LVE + R +N++V FEG + GK
Sbjct: 362 LYILQERINQQAMAWSRRMLGTTQRILVEGTSRKNIMELSGRTENNRVVNFEGTPEMIGK 421
Query: 403 FIEV 406
F++V
Sbjct: 422 FVDV 425
>ref|NP_106183.1| (NC_002678) hypothetical protein [Mesorhizobium loti]
dbj|BAB51969.1| (AP003006) hypothetical protein [Mesorhizobium loti]
Length = 450
Score = 256 bits (653), Expect = 5e-67
Identities = 147/409 (35%), Positives = 231/409 (55%), Gaps = 21/409 (5%)
Query: 2 KVYIETMGCAMNSRDSEHLLSELSKLDYKETNDPKTADLILINTCSVREKPERKLFSEIG 61
KV+I+T GC MN DS+ + L+ Y T+ ADL+L+NTC +REK K++SE+G
Sbjct: 8 KVFIKTYGCQMNVYDSQRMGDALAADGYTATDAIDEADLVLLNTCHIREKAAEKVYSELG 67
Query: 62 QFAKIKKPNA------KIGVCGCTASHMGADILKKAPSVSFVLGARNVSKISQVIHKEKA 115
+ +K A IGV GC A GA+I++++P+V V+G + ++ V+ + +
Sbjct: 68 RIRDMKAERAIAGRELLIGVAGCVAQAEGAEIIRRSPAVDLVIGPQTYHRLPDVLARVRG 127
Query: 116 VEVAIDYDESAYAFEF-FE-----KKAQI-----RSLLNISIGCDKKCAYCIVPHTRGKE 164
E ++ D YA E F+ K+A++ + L + GCDK C +C+VP+TRG E
Sbjct: 128 GEKIVETD---YAIEDKFDHLPQPKRAEVIKRGVTAFLTVQEGCDKFCTFCVVPYTRGSE 184
Query: 165 ISIPMDLILKEAEKLANNGTKELMLLGQNVNNYGARFSSEHAKVDFSDLLDKLSEIQGIE 224
+S P+ I+ EAE+LA G +E+ LLGQNVN + + + LL +L+EI G+
Sbjct: 185 VSRPVAQIVAEAERLAEAGVREVTLLGQNVNAWHGQ-GENGEEWGLGRLLFRLAEIPGLA 243
Query: 225 RIRFTSPHPLHMNDGFLERFAKNPKVCKSIHMPLQSGSSAVLKMMRRGYSKEWFLNRVER 284
R+R+T+ HP M+D + P + +H+P+QSGS +LK M R ++ +L ++R
Sbjct: 244 RLRYTTSHPRDMDDELISAHRDLPSLMPYLHLPVQSGSDRILKAMNRRHTARDYLALLDR 303
Query: 285 LKALVPEVGISTDIIVGFPNESDKDFEDTMEVLEKVRFDTLYSFIYSPRPFTEAGAWKER 344
++A P++ +S D IVGFP E++ DFE TME++ +V + + +SF YSPRP T +
Sbjct: 304 IRAARPDIALSGDFIVGFPGETEADFEATMELVRQVNYASAFSFKYSPRPGTPGAEMPDH 363
Query: 345 VPLEVSSSRLERLQNRHKEILEEKAKLEVGKTHVVLVENRREMDNQIVG 393
VP + RL+RLQ + + VG T L+E Q VG
Sbjct: 364 VPETLKDERLQRLQALLLKQQQGFGSSLVGSTIDTLIEKPGRQAGQKVG 412
>ref|NP_221158.1| (NC_000963) unknown [Rickettsia prowazekii]
sp|Q9ZCE8|Y808_RICPR Hypothetical protein RP808
pir||B71642 hypothetical protein RP808 - Rickettsia prowazekii
emb|CAA15234.1| (AJ235273) unknown [Rickettsia prowazekii]
Length = 445
Score = 254 bits (650), Expect = 1e-66
Identities = 140/408 (34%), Positives = 232/408 (56%), Gaps = 21/408 (5%)
Query: 2 KVYIETMGCAMNSRDSEHLLSELSKLDYKETNDPKTADLILINTCSVREKPERKLFSEIG 61
K+YI+T GC MN DS + L Y+ T D K AD+I++NTC +REK K +SE+G
Sbjct: 4 KLYIKTYGCQMNVYDSVKIQDLLYPFGYESTEDIKEADIIILNTCHIREKAAEKTYSELG 63
Query: 62 QFAKIKKPNAKIG-------VCGCTASHMGADILKKAPSVSFVLGARNVSK----ISQVI 110
+ K++ + G V GC A G +I + P V V+G ++ IS+V+
Sbjct: 64 RIKKLQNTRKQEGLNPAIIVVAGCVAQAEGEEIFSRTPYVDIVVGPQSYYNLPELISKVV 123
Query: 111 HKEKAVEVAIDYDESAYAFEFFEK--KAQIRSLLNISIGCDKKCAYCIVPHTRGKEISIP 168
EK + + +D+ E A E+ S +++ GCDK C +C+VP+TRG E S
Sbjct: 124 RHEKQL-IDLDFVEEAKFDNLPEQLYPQGASSFISVQEGCDKFCTFCVVPYTRGAEFSRS 182
Query: 169 MDLILKEAEKLANNGTKELMLLGQNVNNYGARFSSEHAKVDFSDLLDKLSEIQGIERIRF 228
++ + +E+ K +N KE++LLGQNVN Y + + +DLL L++I + R+R+
Sbjct: 183 VEQVYRESLKAVSNDAKEIILLGQNVNAYHGKGPKDKI-FTLADLLKCLAQIPNLARLRY 241
Query: 229 TSPHPLHMNDGFLERFAKNPKVCKSIHMPLQSGSSAVLKMMRRGYSKEWFLNRVERLKAL 288
+ HP+ M D ++ PK+ +H+P+QSGS+ +LK M R + ++++ N + RL+
Sbjct: 242 MTSHPIDMTDDLIKLHGTEPKLMPFLHLPVQSGSNKILKAMNRKHDRDYYFNIINRLREA 301
Query: 289 VPEVGISTDIIVGFPNESDKDFEDTMEVLEKVRFDTLYSFIYSPRPFTEAGAWKERVPLE 348
++ +S+D IVGFP E+++DFEDT++++ +V++ YSF YSPRP T +++P
Sbjct: 302 RSDIVLSSDFIVGFPGETEQDFEDTLDLVHRVKYGQCYSFKYSPRPGTPGAIRTDQIPEH 361
Query: 349 VSSSRLERLQNRHKEILEEKAKLE---VGKTHVVLVENRREMDNQIVG 393
+ S RL LQ +E+ ++ VG T VL + + ++QI+G
Sbjct: 362 IKSKRLTILQ---QELATQQLAFNQSCVGSTMRVLFDRDGKFEDQIIG 406
>gb|AAF60223.1|AF177477_1 (AF177477) CDK5 activator-binding protein [Rattus norvegicus]
Length = 586
Score = 251 bits (642), Expect = 9e-66
Identities = 172/480 (35%), Positives = 254/480 (52%), Gaps = 49/480 (10%)
Query: 2 KVYIETMGCAMNSRDSEHLLSELSKLDYKETNDPKTADLILINTCSVREKPERKLFSEIG 61
KVY+ET GC MN D+E S L K Y T++ + AD+IL+ TCS+REK E+ +++ +
Sbjct: 98 KVYLETYGCQMNVNDTEIAWSILQKSGYLRTSNLQEADVILLVTCSIREKAEQTIWNRLH 157
Query: 62 QFA--KIKKPNAK----IGVCGCTASHMGADILKKAPSVSFVLGA---RNVSKISQVIHK 112
Q K K+P ++ IG+ GC A + +IL + V + G R++ ++ V+
Sbjct: 158 QLKVLKAKRPRSRVPLRIGILGCMAERLKGEILNREKMVDLLAGPDAYRDLPRLLAVVES 217
Query: 113 -EKAVEVAIDYDES-AYAFEFFEKKAQIRSLLNISIGCDKKCAYCIVPHTRGKEISIPMD 170
++A V + DE+ A + + ++I GCD C+YCIVP TRG+E S P+
Sbjct: 218 GQQAANVLLSLDETYADIMPVQTSPSATSAFVSIMRGCDNMCSYCIVPFTRGRERSRPVA 277
Query: 171 LILKEAEKLANNGTKELMLLGQNVNNYG----ARFSS----------------EHAKVDF 210
IL E KL+ G KE+ LLGQNVN++ +FSS + + F
Sbjct: 278 SILDEVRKLSEQGLKEVTLLGQNVNSFRDNSEVQFSSTGSANLSRGFTTNYKPKQGGLRF 337
Query: 211 SDLLDKLSEIQGIERIRFTSPHPLHMNDGFLERFAKNPKVCKSIHMPLQSGSSAVLKMMR 270
S LLD++S I RIRFTSPHP D L+ + +CK IH+P QSGSS VL+ MR
Sbjct: 338 SHLLDQVSRIDPEMRIRFTSPHPKDFPDEVLQLIRERHNICKQIHLPAQSGSSRVLEAMR 397
Query: 271 RGYSKEWFLNRVERLKALVPEVGISTDIIVGFPNESDKDFEDTMEVLEKVRFDTLYSFIY 330
RGYS+E ++ V ++ +P VG+S+D I GF E++ D T+ +L +V+++T + F Y
Sbjct: 398 RGYSREAYVALVHHIREAIPGVGLSSDFITGFCGETEDDHLQTVSLLREVQYNTGFLFAY 457
Query: 331 SPRPFTEA-GAWKERVPLEVSSSRLERLQNRHKEILEEKAKLEVGKTHVVLVENRREMDN 389
S R T A K+ VP EV RLE L +E + VG T +VLVE +
Sbjct: 458 SMRQKTRAYHRLKDDVPEEVKLRRLEELITVFREEASKVNATSVGCTQLVLVEGFSK--R 515
Query: 390 QIVGFEGRSDTGKFI--------EVT---CKEKRNPGELVKVEIISHS----KGRLMAAT 434
GR+D + ++T K + PG+ V V+IIS S KG ++ T
Sbjct: 516 STTDLCGRNDANLKVIFPDAEVEDITDPGLKVRAQPGDYVLVKIISASSQTLKGHILCRT 575
>ref|NP_219191.1| (NC_000919) conserved hypothetical protein [Treponema pallidum]
sp|O83735|Y754_TREPA Hypothetical protein TP0754
pir||E71284 conserved hypothetical protein TP0754 - syphilis spirochete
gb|AAC65721.1| (AE001247) conserved hypothetical protein [Treponema pallidum]
Length = 456
Score = 251 bits (642), Expect = 9e-66
Identities = 154/443 (34%), Positives = 246/443 (54%), Gaps = 32/443 (7%)
Query: 1 MKVYIETMGCAMNSRDSEHLLSELSKLDYKETNDPKTADLILINTCSVREKPERKLFSEI 60
M + ET GC MN +S + L + + D +T D+++INTCSVR E ++F +
Sbjct: 1 MTYFFETYGCQMNVAESASVEQLLLARGWTKAVDAQTCDVLIINTCSVRITAETRVFGRL 60
Query: 61 GQFAKIKKPNAK-IGVCGCTASHMGADILKKAPSVSFVLG----ARNVSKISQVIHKEKA 115
G F+ +KK A I + GC A + I ++ P + +V+G AR S ++ K
Sbjct: 61 GLFSSLKKKRAFFIILMGCMAQRLHDKIQQQFPRIDYVVGTFAHARFESIFQEIEQKLTQ 120
Query: 116 VEVAIDYDESAY------AFEFFEK---KAQIRSLLNISIGCDKKCAYCIVPHTRGKEIS 166
+ ++ Y + FF + +S + I GC+ C++CIVP+ RG+EIS
Sbjct: 121 KDYRFEFISERYREHPVSGYRFFASSYSEGSFQSFIPIMNGCNNFCSFCIVPYVRGREIS 180
Query: 167 IPMDLILKEAEKLANNGTKELMLLGQNVNNYGARFSSEHAKVDFSDLLDKL---SEIQG- 222
+D IL+E + L+ G +E+ LLGQNVN+Y R E V F LL L E++
Sbjct: 181 RDLDAILQEVDVLSEKGVREITLLGQNVNSYRGR-DREGNIVTFPQLLRHLVRRCEVKDQ 239
Query: 223 IERIRFTSPHPLHMNDGFLERFAKNPKVCKSIHMPLQSGSSAVLKMMRRGYSKEWFLNRV 282
I+ IRF S HP ++D + A+ ++C+ +H+P+Q G++ VLK MRR Y++E +L+ V
Sbjct: 240 IKWIRFVSSHPKDLSDDLIATIAQESRLCRLVHLPVQHGANGVLKRMRRSYTREQYLSLV 299
Query: 283 ERLKALVPEVGISTDIIVGFPNESDKDFEDTMEVLEKVRFDTLYSFIYSPRPFTEAGAWK 342
+LKA VP V +STDI++GFP E+++DFE T++++ +V FD+ + + Y+PR T A +
Sbjct: 300 GKLKASVPNVALSTDILIGFPGETEEDFEQTLDLMREVEFDSAFMYHYNPREGTPAYDFP 359
Query: 343 ERVPLEVSSSRLERLQNRHKEILEEKAKLEVGKTHVVLVENR-REMDNQIVG-------- 393
+R+P +RL+R+ +K + VGKT VLVE+R R ++ G
Sbjct: 360 DRIPDATRIARLQRVIALQMSTTLKKMRARVGKTLPVLVESRSRNNPEELFGHTELGEMT 419
Query: 394 -FEGRSD---TGKFIEVTCKEKR 412
EG+ D G+F++V KE R
Sbjct: 420 VLEGKVDPTYIGRFVDVQVKEVR 442
>ref|NP_080152.1| (NM_025876) RIKEN cDNA 2310066P17 [Mus musculus]
dbj|BAB26700.1| (AK010097) data source:SPTR, source key:Q9JLH6,
evidence:ISS~homolog to CDK5 ACTIVATOR-BINDING
PROTEIN~putative [Mus musculus]
gb|AAH25132.1| (BC025132) RIKEN cDNA 2310066P17 gene [Mus musculus]
Length = 588
Score = 248 bits (632), Expect = 1e-64
Identities = 167/480 (34%), Positives = 249/480 (51%), Gaps = 49/480 (10%)
Query: 2 KVYIETMGCAMNSRDSEHLLSELSKLDYKETNDPKTADLILINTCSVREKPERKLFSEIG 61
KVY+ET GC MN D+E S L K Y T++ + AD+IL+ TCS+REK E+ +++ +
Sbjct: 100 KVYLETYGCQMNVNDTEIAWSILQKSGYLRTSNLQEADVILLVTCSIREKAEQTIWNRLH 159
Query: 62 QFA--KIKKPNAK----IGVCGCTASHMGADILKKAPSVSFVLGA---RNVSKISQVIHK 112
Q K K+P ++ IG+ GC A + +IL + V + G R++ ++ V+
Sbjct: 160 QLKVLKTKRPRSRVPLRIGILGCMAERLKGEILNREKMVDLLAGPDAYRDLPRLLAVVES 219
Query: 113 -EKAVEVAIDYDES-AYAFEFFEKKAQIRSLLNISIGCDKKCAYCIVPHTRGKEISIPMD 170
++A V + DE+ A + + ++I GCD C+YCIVP TRG+E S P+
Sbjct: 220 GQQAANVLLSLDETYADIMPVQTSPSATSAFVSIMRGCDNMCSYCIVPFTRGRERSRPVA 279
Query: 171 LILKEAEKLANNGTKELMLLGQNVNNYG--------------------ARFSSEHAKVDF 210
IL E KL+ G KE+ LLGQNVN++ + + + F
Sbjct: 280 SILDEVRKLSEQGLKEVTLLGQNVNSFRDNSEVQFNNAGSANLSRGFTTNYKPKQGGLRF 339
Query: 211 SDLLDKLSEIQGIERIRFTSPHPLHMNDGFLERFAKNPKVCKSIHMPLQSGSSAVLKMMR 270
S LLD++S I RIRFTSPHP D L+ + +CK IH+P QSGSS VL MR
Sbjct: 340 SHLLDQVSRIDPEMRIRFTSPHPKDFPDEVLQLIRERHNICKQIHLPAQSGSSRVLDAMR 399
Query: 271 RGYSKEWFLNRVERLKALVPEVGISTDIIVGFPNESDKDFEDTMEVLEKVRFDTLYSFIY 330
RGYS+E ++ V ++ +P V +S+D I GF E++ D T+ +L +V+++T + F Y
Sbjct: 400 RGYSREAYVALVHHVRETIPGVSLSSDFITGFCGETEDDHRQTVSLLREVQYNTGFLFAY 459
Query: 331 SPRPFTEA-GAWKERVPLEVSSSRLERLQNRHKEILEEKAKLEVGKTHVVLVENRREMDN 389
S R T A K+ VP EV RLE L +E + K VG + +VLVE +
Sbjct: 460 SMRQKTRAYHRLKDDVPEEVKLRRLEELITVFREEASKANKTSVGCSQLVLVEGFSK--R 517
Query: 390 QIVGFEGRSDTGKFI--------EVT---CKEKRNPGELVKVEIISHS----KGRLMAAT 434
GR+D + ++T K + PG+ V V+I S S KG ++ T
Sbjct: 518 STTDLCGRNDANLKVIFPDAEVEDITNPGLKVRAQPGDYVLVKITSASSQTLKGHILCRT 577
>emb|CAC15883.2| (AL355392) dJ1187J4.4 (CGI-05 protein (LOC51654) similar to rat
CDK5 activator-binding protein) [Homo sapiens]
Length = 548
Score = 243 bits (620), Expect = 3e-63
Identities = 157/455 (34%), Positives = 242/455 (52%), Gaps = 37/455 (8%)
Query: 2 KVYIETMGCAMNSRDSEHLLSELSKLDYKETNDPKTADLILINTCSVREKPERKLFSEIG 61
KVY+ET GC MN D+E S L K Y T++ + AD+IL+ TCS+REK E+ +++ +
Sbjct: 62 KVYLETYGCQMNVNDTEIAWSILQKSGYLRTSNLQEADVILLVTCSIREKAEQTIWNRLH 121
Query: 62 QFAKIK--KPNAK----IGVCGCTASHMGADILKKAPSVSFVLGA---RNVSKISQVIHK 112
Q +K +P ++ IG+ GC A + +IL + V + G R++ ++ V
Sbjct: 122 QLKALKTRRPRSRVPLRIGILGCMAERLKEEILNREKMVDILAGPDAYRDLPRLLAVAES 181
Query: 113 -EKAVEVAIDYDESAYAFEFFEKKAQIRS-LLNISIGCDKKCAYCIVPHTRGKEISIPMD 170
++A V + DE+ + A S ++I GCD C+YCIVP TRG+E S P+
Sbjct: 182 GQQAANVLLSLDETYADVMPVQTSASATSAFVSIMRGCDNMCSYCIVPFTRGRERSRPIA 241
Query: 171 LILKEAEKLANNGTKELMLLGQNVNNYG--------------------ARFSSEHAKVDF 210
IL+E +KL+ G KE+ LLGQNVN++ + ++ + F
Sbjct: 242 SILEEVKKLSEQGLKEVTLLGQNVNSFRDNSEVQFNSAVPTNLSRGFTTNYKTKQGGLRF 301
Query: 211 SDLLDKLSEIQGIERIRFTSPHPLHMNDGFLERFAKNPKVCKSIHMPLQSGSSAVLKMMR 270
+ LLD++S + RIRFTSPHP D L+ + +CK IH+P QSGSS VL+ MR
Sbjct: 302 AHLLDQVSRVDPEMRIRFTSPHPKDFPDEVLQLIHERDNICKQIHLPAQSGSSRVLEAMR 361
Query: 271 RGYSKEWFLNRVERLKALVPEVGISTDIIVGFPNESDKDFEDTMEVLEKVRFDTLYSFIY 330
RGYS+E ++ V ++ +P V +S+D I GF E+++D T+ +L +V+++ + F Y
Sbjct: 362 RGYSREAYVELVHHIRESIPGVSLSSDFIAGFCGETEEDHVQTVSLLREVQYNMGFLFAY 421
Query: 331 SPRPFTEA-GAWKERVPLEVSSSRLERLQNRHKEILEEKAKLEVGKTHVVLVENRREMDN 389
S R T A K+ VP EV RLE L +E + + VG T +VLVE +
Sbjct: 422 SMRQKTRAYHRLKDDVPEEVKLRRLEELITIFREEATKANQTSVGCTQLVLVEGLSK--R 479
Query: 390 QIVGFEGRSDTGK---FIEVTCKEKRNPGELVKVE 421
GR+D F + ++ NPG V+ +
Sbjct: 480 SATDLCGRNDGNLKVIFPDAEMEDVNNPGLRVRAQ 514
>ref|XP_015893.2| (XM_015893) similar to hypothetical protein HSPC167; hypothetical
protein; CGI-05 protein [Homo sapiens]
Length = 587
Score = 243 bits (620), Expect = 3e-63
Identities = 157/455 (34%), Positives = 242/455 (52%), Gaps = 37/455 (8%)
Query: 2 KVYIETMGCAMNSRDSEHLLSELSKLDYKETNDPKTADLILINTCSVREKPERKLFSEIG 61
KVY+ET GC MN D+E S L K Y T++ + AD+IL+ TCS+REK E+ +++ +
Sbjct: 101 KVYLETYGCQMNVNDTEIAWSILQKSGYLRTSNLQEADVILLVTCSIREKAEQTIWNRLH 160
Query: 62 QFAKIK--KPNAK----IGVCGCTASHMGADILKKAPSVSFVLGA---RNVSKISQVIHK 112
Q +K +P ++ IG+ GC A + +IL + V + G R++ ++ V
Sbjct: 161 QLKALKTRRPRSRVPLRIGILGCMAERLKEEILNREKMVDILAGPDAYRDLPRLLAVAES 220
Query: 113 -EKAVEVAIDYDESAYAFEFFEKKAQIRS-LLNISIGCDKKCAYCIVPHTRGKEISIPMD 170
++A V + DE+ + A S ++I GCD C+YCIVP TRG+E S P+
Sbjct: 221 GQQAANVLLSLDETYADVMPVQTSASATSAFVSIMRGCDNMCSYCIVPFTRGRERSRPIA 280
Query: 171 LILKEAEKLANNGTKELMLLGQNVNNYG--------------------ARFSSEHAKVDF 210
IL+E +KL+ G KE+ LLGQNVN++ + ++ + F
Sbjct: 281 SILEEVKKLSEQGLKEVTLLGQNVNSFRDNSEVQFNSAVPTNLSRGFTTNYKTKQGGLRF 340
Query: 211 SDLLDKLSEIQGIERIRFTSPHPLHMNDGFLERFAKNPKVCKSIHMPLQSGSSAVLKMMR 270
+ LLD++S + RIRFTSPHP D L+ + +CK IH+P QSGSS VL+ MR
Sbjct: 341 AHLLDQVSRVDPEMRIRFTSPHPKDFPDEVLQLIHERDNICKQIHLPAQSGSSRVLEAMR 400
Query: 271 RGYSKEWFLNRVERLKALVPEVGISTDIIVGFPNESDKDFEDTMEVLEKVRFDTLYSFIY 330
RGYS+E ++ V ++ +P V +S+D I GF E+++D T+ +L +V+++ + F Y
Sbjct: 401 RGYSREAYVELVHHIRESIPGVSLSSDFIAGFCGETEEDHVQTVSLLREVQYNMGFLFAY 460
Query: 331 SPRPFTEA-GAWKERVPLEVSSSRLERLQNRHKEILEEKAKLEVGKTHVVLVENRREMDN 389
S R T A K+ VP EV RLE L +E + + VG T +VLVE +
Sbjct: 461 SMRQKTRAYHRLKDDVPEEVKLRRLEELITIFREEATKANQTSVGCTQLVLVEGLSK--R 518
Query: 390 QIVGFEGRSDTGK---FIEVTCKEKRNPGELVKVE 421
GR+D F + ++ NPG V+ +
Sbjct: 519 SATDLCGRNDGNLKVIFPDAEMEDVNNPGLRVRAQ 553
>dbj|BAB14760.1| (AK023992) unnamed protein product [Homo sapiens]
Length = 587
Score = 241 bits (616), Expect = 9e-63
Identities = 156/455 (34%), Positives = 241/455 (52%), Gaps = 37/455 (8%)
Query: 2 KVYIETMGCAMNSRDSEHLLSELSKLDYKETNDPKTADLILINTCSVREKPERKLFSEIG 61
KVY+ET GC MN D+E S L K Y T++ + AD+IL+ TCS+REK E+ +++ +
Sbjct: 101 KVYLETYGCQMNVNDTEIAWSILQKSGYLRTSNLQEADVILLVTCSIREKAEQTIWNRLH 160
Query: 62 QFAKIK--KPNAK----IGVCGCTASHMGADILKKAPSVSFVLGA---RNVSKISQVIHK 112
Q +K +P ++ IG+ GC A + +IL + V + G R++ ++ V
Sbjct: 161 QLKALKTRRPRSRVPLRIGILGCMAERLKEEILNREKMVDILAGPDAYRDLPRLLAVAES 220
Query: 113 -EKAVEVAIDYDESAYAFEFFEKKAQIRS-LLNISIGCDKKCAYCIVPHTRGKEISIPMD 170
++A V + DE+ + A S ++I GCD C+YCIVP TRG+E S P+
Sbjct: 221 GQQAANVLLSLDETYADVMPVQTSASATSAFVSIMRGCDNMCSYCIVPFTRGRERSRPIA 280
Query: 171 LILKEAEKLANNGTKELMLLGQNVNNYG--------------------ARFSSEHAKVDF 210
IL+E +KL+ G KE+ LLGQNVN++ + ++ + F
Sbjct: 281 SILEEVKKLSEQGLKEVTLLGQNVNSFRDNSEVQFNSAVPTNLSRGFTTNYKTKQGGLRF 340
Query: 211 SDLLDKLSEIQGIERIRFTSPHPLHMNDGFLERFAKNPKVCKSIHMPLQSGSSAVLKMMR 270
+ LLD++S + RIRFTSPHP D L+ + +CK IH+P QSGSS VL+ MR
Sbjct: 341 AHLLDQVSRVDPEMRIRFTSPHPKDFPDEVLQLIHERDNICKQIHLPAQSGSSRVLEAMR 400
Query: 271 RGYSKEWFLNRVERLKALVPEVGISTDIIVGFPNESDKDFEDTMEVLEKVRFDTLYSFIY 330
RGYS+E ++ V ++ +P V +S+D I GF E+++D T+ +L + +++ + F Y
Sbjct: 401 RGYSREAYVELVHHIRESIPGVSLSSDFIAGFCGETEEDHVQTVSLLREAQYNMGFLFAY 460
Query: 331 SPRPFTEA-GAWKERVPLEVSSSRLERLQNRHKEILEEKAKLEVGKTHVVLVENRREMDN 389
S R T A K+ VP EV RLE L +E + + VG T +VLVE +
Sbjct: 461 SMRQKTRAYHRLKDDVPEEVKLRRLEELITIFREEATKANQTSVGCTQLVLVEGLSK--R 518
Query: 390 QIVGFEGRSDTGK---FIEVTCKEKRNPGELVKVE 421
GR+D F + ++ NPG V+ +
Sbjct: 519 SATDLCGRNDGNLKVIFPDAEMEDVNNPGLRVRAQ 553
>gb|EAA00300.1| (AAAB01008986) agCP9825 [Anopheles gambiae str. PEST]
Length = 581
Score = 237 bits (605), Expect = 2e-61
Identities = 148/418 (35%), Positives = 229/418 (54%), Gaps = 39/418 (9%)
Query: 2 KVYIETMGCAMNSRDSEHLLSELSKLDYKETNDPKTADLILINTCSVREKPERKLFSEIG 61
KV++E GC MN+ D+E + S L Y T + K AD++L+ TC++RE E +++ +
Sbjct: 90 KVFLEVYGCQMNTNDTEIVWSILKAHQYHRTVNLKEADIVLMMTCAIREGAEDTVWNRLK 149
Query: 62 QFAKIKKPNA-------KIGVCGCTASHMGADILKKAPSVSFVLGARNVSKISQVI---- 110
+K+ +IGV GC A + +++K SV V G + +++
Sbjct: 150 HLRLLKRKRETNGEKPLQIGVLGCMAERLKKQLVEKEHSVDVVAGPDAYKDLPRLLAIGQ 209
Query: 111 HKEKAVEVAIDYDESAYAFEF---FEKKAQIRSLLNISIGCDKKCAYCIVPHTRGKEISI 167
+KA+ V + DE+ YA ++K++ + ++I GCD C+YCIVP TRGKE S
Sbjct: 210 RGQKAINVLLSLDET-YADVVPVKLDRKSKT-AFVSIMRGCDNMCSYCIVPFTRGKERSR 267
Query: 168 PMDLILKEAEKLANNGTKELMLLGQNVNNY--------------------GAR--FSSEH 205
P+ I +E +L N G +E+ LLGQNVN+Y G R + S+
Sbjct: 268 PIKSIREEVLQLENEGIREITLLGQNVNSYRDTSDESLEDAPKEATLLAPGFRTVYKSKV 327
Query: 206 AKVDFSDLLDKLSEIQGIERIRFTSPHPLHMNDGFLERFAKNPKVCKSIHMPLQSGSSAV 265
+ F++LL +L+E RIRFTSPHP LE AK P +C S+H+P QSG++ V
Sbjct: 328 GGLRFAELLTELAEAVPEMRIRFTSPHPKDFPVDVLETIAKYPNICNSLHLPAQSGNTQV 387
Query: 266 LKMMRRGYSKEWFLNRVERLKALVPEVGISTDIIVGFPNESDKDFEDTMEVLEKVRFDTL 325
L+ MRRGY++E +LN VE ++ ++P V +S+D I GF ES+ +F DT+ ++E+V +
Sbjct: 388 LERMRRGYTREAYLNLVEEVRRIIPNVTLSSDFICGFCGESEPEFADTVSLIEQVGYHAA 447
Query: 326 YSFIYSPRPFTEA-GAWKERVPLEVSSSRLERLQNRHKEILEEKAKLEVGKTHVVLVE 382
+ F YS R T A + + VP EV RL R+ + E L V +T +VL+E
Sbjct: 448 FLFAYSMREKTTAHRRYSDDVPEEVKQERLRRMIAAFRREAERLNSLFVDRTELVLIE 505
>ref|NP_195357.1| (NM_119802) putative protein [Arabidopsis thaliana]
emb|CAB16849.1| (Z99708) putative protein [Arabidopsis thaliana]
emb|CAB80305.1| (AL161589) putative protein [Arabidopsis thaliana]
Length = 587
Score = 236 bits (601), Expect = 5e-61
Identities = 159/486 (32%), Positives = 257/486 (52%), Gaps = 60/486 (12%)
Query: 2 KVYIETMGCAMNSRDSEHLLSELSKLDYKET-NDPKTADLILINTCSVREKPERKLFSEI 60
++Y ET GC MN D E +L+ + YKE DP++A++I +NTC++RE E++++ +
Sbjct: 77 RIYHETYGCQMNINDMEIVLAIMKNSGYKEVVTDPESAEVIFVNTCAIRENAEQRVWQRL 136
Query: 61 GQFAKIK---KPNA-----------KIGVCGCTASHMGADILKKAPSVSFVLGA---RNV 103
F +K K NA K+ V GC A + IL V V G R++
Sbjct: 137 NYFWFLKREWKVNAATGRAKSLKPPKVVVLGCMAERLKDKILDSDKMVDVVCGPDAYRDL 196
Query: 104 SKI-SQVIHKEKAVEVAIDYDES-AYAFEFFEKKAQIRSLLNISIGCDKKCAYCIVPHTR 161
++ +V + +K + + +E+ A + I + +++ GC+ CA+CIVP TR
Sbjct: 197 PRLLEEVDYGQKGINTLLSLEETYADISPVRISENSITAFVSVMRGCNNMCAFCIVPFTR 256
Query: 162 GKEISIPMDLILKEAEKLANNGTKELMLLGQNVNNY---------GARFS-----SEHAK 207
G+E S P++ I++E +L +G KE+ LLGQNVN+Y GA + S K
Sbjct: 257 GRERSRPVESIIREVGELWESGVKEVTLLGQNVNSYNDDSADRESGANWEYSEGFSSRCK 316
Query: 208 VD-----FSDLLDKLSEIQGIERIRFTSPHPLHMNDGFLERFAKNPKVCKSIHMPLQSGS 262
V F+DLLD+LS R RFTSPHP D L +C IH+P QSG+
Sbjct: 317 VKNMGLRFADLLDRLSVEFPEMRFRFTSPHPKDYPDELLYLMRDRHNICNLIHLPAQSGN 376
Query: 263 SAVLKMMRRGYSKEWFLNRVERLKALVPEVGISTDIIVGFPNESDKDFEDTMEVLEKVRF 322
S +L+ MRRGY++E +L+ V+++++++P+V I++D I GF E++++ ++T+ ++ V +
Sbjct: 377 SRILEQMRRGYTREAYLDLVKKIRSIIPDVAITSDFITGFCGETEEEHQETLSLVRAVGY 436
Query: 323 DTLYSFIYSPRPFTEAGA-WKERVPLEVSSSRLERLQNRHKEILEEKAKLEVGKTHVVLV 381
D Y F YS R T A + + VP EV RL L + +E +VG T +VLV
Sbjct: 437 DMAYMFAYSMREKTHAHRNYTDDVPEEVKQRRLTELIDAFRETTGPCYDSQVGSTQLVLV 496
Query: 382 E--NRREMDNQIVGFEGRSDTGKFIEVTCKE-------------KRNP--GELVKVEIIS 424
E N+R + +++ G++D G + K KRNP G+ V+V+I
Sbjct: 497 EGPNKRAPETELI---GKTDKGHRVSFVTKPLFDKACLLDGDDLKRNPGIGDFVEVQIEK 553
Query: 425 HSKGRL 430
++ L
Sbjct: 554 STRASL 559
>ref|NP_294874.1| (NC_001263) conserved hypothetical protein [Deinococcus
radiodurans]
pir||H75431 conserved hypothetical protein - Deinococcus radiodurans (strain
R1)
gb|AAF10722.1|AE001964_6 (AE001964) conserved hypothetical protein [Deinococcus radiodurans]
Length = 505
Score = 234 bits (598), Expect = 1e-60
Identities = 136/395 (34%), Positives = 218/395 (54%), Gaps = 28/395 (7%)
Query: 1 MKVYIETMGCAMNSRDSEHLLSELSKLDYKETNDPKTADLILINTCSVREKPERKLFSEI 60
MK ++ T GC MN D+ + S+L P AD +L+NTC+VR KP K+ S +
Sbjct: 47 MKAHLITYGCQMNEYDTHLVQSQLVSFGADIVESPDEADFVLVNTCAVRGKPVDKVRSLL 106
Query: 61 GQFAKIKKPNAKI-GVCGCTASHMGADILKKAPSVSFVLGARNVSKISQVIHKEKAVEVA 119
G K K + + G+ GC A + + V +LG ++ I A
Sbjct: 107 GDLRKQKAQRSLVVGMMGCLAQLEEGQQIARKFEVDVLLGPGSLLDIG----------AA 156
Query: 120 IDYDESAYAFEFFEK---------KAQIRSLLNISIGCDKKCAYCIVPHTRGKEISIPMD 170
++ +E + +F ++ ++++ L I GCD C YCIVP TRG ++S D
Sbjct: 157 LESNERFWGLQFKDELHDHIPPPPSGKLQAHLTIMRGCDHHCTYCIVPTTRGPQVSRHPD 216
Query: 171 LILKEAEKLANNGTKELMLLGQNVNNYGARFSSEHAKV----DFSDLLDKLSEIQGIERI 226
IL+E + G +E+ LLGQNVN YG + AK+ F+DLL ++ GIER+
Sbjct: 217 DILRELDMQLAAGVREVTLLGQNVNAYGV---DQGAKLKGYPSFADLL-RMVGASGIERV 272
Query: 227 RFTSPHPLHMNDGFLERFAKNPKVCKSIHMPLQSGSSAVLKMMRRGYSKEWFLNRVERLK 286
+FT+ HP++ + + P +C+ +H+P+QSGS VL+ M R Y++E +L + ++K
Sbjct: 273 KFTTSHPMNFTEDVAAAIGETPAICEFVHLPVQSGSDRVLRRMAREYNREKYLTHIAQIK 332
Query: 287 ALVPEVGISTDIIVGFPNESDKDFEDTMEVLEKVRFDTLYSFIYSPRPFTEAGAWKERVP 346
+P+V ++TDIIVGFP E+++DF+DT+ + ++V +D+ Y FIYSPRP T + + +P
Sbjct: 333 KHIPDVVLATDIIVGFPGETEEDFQDTLSLYDEVGYDSAYMFIYSPRPGTPSYKHFQDLP 392
Query: 347 LEVSSSRLERLQNRHKEILEEKAKLEVGKTHVVLV 381
E+ + RL+RL R K+ K +VG VL+
Sbjct: 393 RELKTERLQRLIARQKDWSARKNAQKVGTVQQVLL 427
>ref|NP_662869.1| (NC_002932) conserved hypothetical protein [Chlorobium tepidum TLS]
gb|AAM73211.1| (AE012950) conserved hypothetical protein [Chlorobium tepidum TLS]
Length = 444
Score = 233 bits (595), Expect = 3e-60
Identities = 144/439 (32%), Positives = 235/439 (52%), Gaps = 24/439 (5%)
Query: 4 YIETMGCAMNSRDSEHLLSELSKLDYKETNDPKTADLILINTCSVREKPERKLFSEIGQF 63
YI T GC MN DSE + + L + + D AD++L+N+C+VRE E +L I
Sbjct: 13 YIHTFGCQMNQADSEIVTALLRAEGFVPSADETNADIVLLNSCAVRENAEERL-GNILMH 71
Query: 64 AKIKKPNAK---IGVCGCTASHMGADILKKAPSVSFVLGARNVSKISQVI---HKEKAVE 117
K +K K IGV GC + P V F++G N +++ ++ + A
Sbjct: 72 LKGRKRRCKELVIGVLGCVPQFERERVFSDYPFVDFIVGPDNYRELAGLVAGLREAVARP 131
Query: 118 VAIDYDES-AYAFEFFEKKAQIRSLLNISIGCDKKCAYCIVPHTRGKEISIPMDLILKEA 176
+DYD++ YA + I + L + GC+ CA+C+VP TRG+E S+ + ++ E
Sbjct: 132 ALLDYDQTETYAGIEPVRAGSISAFLPVMRGCNNHCAFCVVPVTRGRERSVGFERVVAEV 191
Query: 177 EKLANNGTKELMLLGQNVNNYGARFSSEHAKVDFSDLLDKLSEIQGIERIRFTSPHPLHM 236
L G +E+ LLGQNVN++ +DF+ LL+ +S RIRFT+ HP +
Sbjct: 192 VALEKAGFREVTLLGQNVNSW----RDAEKGLDFAGLLEGVSLAVPSMRIRFTTSHPKDI 247
Query: 237 NDGFLERFAKNPKVCKSIHMPLQSGSSAVLKMMRRGYSKEWFLNRVERLKALVPEVGIST 296
++ ++ A P +C IH+P+QSGSS +L +M+RG+++E +L+R+ +++ +PEV I+T
Sbjct: 248 SEALVKVIAARPNLCNHIHLPVQSGSSRMLDLMKRGHTREEYLDRIAMIRSYIPEVAITT 307
Query: 297 DIIVGFPNESDKDFEDTMEVLEKVRFDTLYSFIYSPRPFTEAGAWKER-----VPLEVSS 351
D+I GF E++KD +T+ ++E V +DT + F YS RP G W R VP V
Sbjct: 308 DLIAGFCTETEKDHRETLSLMEAVGYDTAFMFHYSVRP----GTWAARNLPDDVPDTVKK 363
Query: 352 SRLERLQNRHKEILEEKAKLEVGKTHVVLVENRREMDNQIVGFEGRSDTGKFIEVTCKEK 411
+RL+ + I E + E+GKT VL E + ++ GR+ + + V + +
Sbjct: 364 ARLQEIIELQNAISREIFQREIGKTVEVLAEAESKRSESML--MGRTPENRVV-VFSRGR 420
Query: 412 RNPGELVKVEIISHSKGRL 430
NP + + V+I + L
Sbjct: 421 FNPSDTLLVKITGATSATL 439
>ref|NP_650002.1| (NM_141745) CG6345 gene product [Drosophila melanogaster]
gb|AAF54531.1| (AE003687) CG6345 gene product [Drosophila melanogaster]
gb|AAL48716.1| (AY071094) RE15838p [Drosophila melanogaster]
Length = 583
Score = 231 bits (589), Expect = 1e-59
Identities = 135/431 (31%), Positives = 231/431 (53%), Gaps = 35/431 (8%)
Query: 2 KVYIETMGCAMNSRDSEHLLSELSKLDYKETNDPKTADLILINTCSVREKPERKLFSEIG 61
KV+ E GC MN+ D+E + S L + Y +P+ AD+I++ TC+VR+ E+++ + +
Sbjct: 93 KVHFEVYGCQMNTNDTEVVFSILKENGYLRCQEPEEADVIMLVTCAVRDGAEQRIRNRLK 152
Query: 62 QFAKIKKPNA------KIGVCGCTASHMGADILKKAPSVSFVLGARNVSKISQVI----- 110
+K + ++ + GC A + +L++ V + G + + +++
Sbjct: 153 HLRAMKNKRSTRRHPLQLTLLGCMAERLKEKLLEQEQCVDVIAGPDSYKDLPRLLAISRH 212
Query: 111 HKEKAVEVAIDYDES-AYAFEFFEKKAQIRSLLNISIGCDKKCAYCIVPHTRGKEISIPM 169
+ A+ V + DE+ A + ++I GCD C YCIVP TRG+E S P+
Sbjct: 213 YGNSAINVLLSLDETYADVMPVRLNSESPTAFVSIMRGCDNMCTYCIVPFTRGRERSRPL 272
Query: 170 DLILKEAEKLANNGTKELMLLGQNVNNYGARFSSEHAK--------------------VD 209
I+ E + LA G KE+ LLGQNVN+Y R + E
Sbjct: 273 ASIVAEVKALAEQGVKEVTLLGQNVNSYRDRTAQEEQDSLKATPVPGFSTVYKPKTGGTP 332
Query: 210 FSDLLDKLSEIQGIERIRFTSPHPLHMNDGFLERFAKNPKVCKSIHMPLQSGSSAVLKMM 269
F+ LL +++ RIRFTSPHP +D LE +P VCK +H+P QSG++ VL+ M
Sbjct: 333 FAALLRSVAQAVPDMRIRFTSPHPKDFSDEVLEVIRDHPNVCKQLHLPAQSGNTQVLERM 392
Query: 270 RRGYSKEWFLNRVERLKALVPEVGISTDIIVGFPNESDKDFEDTMEVLEKVRFDTLYSFI 329
RRGYS+E +L V+ ++ +P VG+S+D I GF E++++F+DT+ ++++V+++ Y F
Sbjct: 393 RRGYSREAYLELVQHIRQFLPNVGLSSDFICGFCGETEEEFQDTVSLIQQVQYNVAYLFA 452
Query: 330 YSPRPFTEA-GAWKERVPLEVSSSRLERLQNRHKEILEEKAKLEVGKTHVVLVENRREMD 388
YS R T A +K+ VP+ V + RL+R+ +E + + G+ ++L+E + +
Sbjct: 453 YSMREKTTAHRRYKDDVPINVKNERLQRMVQVFREGATQLHRKMEGQEQLILIEGKSKRS 512
Query: 389 NQIVGFEGRSD 399
+ + GR+D
Sbjct: 513 D--AHWFGRND 521
>dbj|BAB55120.1| (AK027449) unnamed protein product [Homo sapiens]
Length = 395
Score = 226 bits (576), Expect = 4e-58
Identities = 138/385 (35%), Positives = 212/385 (54%), Gaps = 32/385 (8%)
Query: 2 KVYIETMGCAMNSRDSEHLLSELSKLDYKETNDPKTADLILINTCSVREKPERKLFSEIG 61
KVY+ET GC MN D+E S L K Y T++ + AD+IL+ TCS+REK E+ +++ +
Sbjct: 11 KVYLETYGCQMNVNDTEIAWSILQKSGYLRTSNLQEADVILLVTCSIREKAEQTIWNRLH 70
Query: 62 QFAKIK--KPNAK----IGVCGCTASHMGADILKKAPSVSFVLGA---RNVSKISQVIHK 112
Q +K +P ++ IG+ GC A + +IL + V + G R++ ++ V
Sbjct: 71 QLKALKTRRPRSRVPLRIGILGCMAERLKEEILNREKMVDILAGPDAYRDLPRLLAVAES 130
Query: 113 -EKAVEVAIDYDESAYAFEFFEKKAQIRS-LLNISIGCDKKCAYCIVPHTRGKEISIPMD 170
++A V + DE+ + A S ++I GCD C+YCIVP TRG+E S P+
Sbjct: 131 GQQAANVLLSLDETYADVMPVQTSASATSAFVSIMRGCDNMCSYCIVPLTRGRERSRPIA 190
Query: 171 LILKEAEKLANNGTKELMLLGQNVNNYGAR--------------------FSSEHAKVDF 210
L+E +KL+ G KE+ LLGQNVN++ + ++ + F
Sbjct: 191 STLEEVKKLSEQGLKEVTLLGQNVNSFRGNSEVQFNSAVPTNLSRGFTTNYKTKQGGLRF 250
Query: 211 SDLLDKLSEIQGIERIRFTSPHPLHMNDGFLERFAKNPKVCKSIHMPLQSGSSAVLKMMR 270
+ LLD++S + RIRFTSPHP D L+ + +CK IH+P QSGSS VL+ MR
Sbjct: 251 AHLLDQVSRVDPEMRIRFTSPHPKDFPDEVLQLIHERDNICKQIHLPAQSGSSRVLEAMR 310
Query: 271 RGYSKEWFLNRVERLKALVPEVGISTDIIVGFPNESDKDFEDTMEVLEKVRFDTLYSFIY 330
RGYS+E ++ V ++ +P V +S+D I GF E+++D T+ +L +V+++ + F Y
Sbjct: 311 RGYSREAYVELVHHIRESIPGVSLSSDFIAGFCGETEEDHVQTVSLLREVQYNMGFLFAY 370
Query: 331 SPRPFTEA-GAWKERVPLEVSSSRL 354
S R T A K+ VP EV RL
Sbjct: 371 SMRQKTRAYHRLKDDVPEEVKLRRL 395
>ref|NP_057166.1| (NM_016082) CGI-05 protein; hypothetical protein [Homo sapiens]
gb|AAD34147.1|AF152097_1 (AF152097) CGI-05 protein [Homo sapiens]
Length = 554
Score = 226 bits (575), Expect = 5e-58
Identities = 156/469 (33%), Positives = 239/469 (50%), Gaps = 52/469 (11%)
Query: 2 KVYIETMGCAMNSRDSEHLLSELSKLDYKETNDPKTADLILINTCSVREKPERKLFSEIG 61
KVY+ET GC MN D+E S L K Y + AD+IL+ TCS+REK E+ +++ +
Sbjct: 62 KVYLETYGCQMNVNDTEIAWSILQKSGYLRPVTSR-ADVILLVTCSIREKAEQTIWNRLH 120
Query: 62 QFAKIK--KPNAK----IGVCGCTASHMGADILKKAPSVSFVLGA---RNVSKISQVIHK 112
Q +K +P ++ IG+ GC A + +IL + V + G R++ ++ V
Sbjct: 121 QLKALKTRRPRSRVPLRIGILGCMAERLKEEILNREKMVDILAGPDAYRDLPRLLAVAES 180
Query: 113 -EKAVEVAIDYDESAYAFEFFEKKAQIRS-LLNISIGCDKKCAYCIVPHTRGKEISIPMD 170
++A V + DE+ + A S ++I GCD C+YCIVP TRG+E S P+
Sbjct: 181 GQQAANVLLSLDETYADVMPVQTSASATSAFVSIMRGCDNMCSYCIVPFTRGRERSRPIA 240
Query: 171 LILKEAEKLANN--------------GTKELMLLGQNVNNYG------------------ 198
IL+E +KL+ G KE+ LLGQNVN++
Sbjct: 241 SILEEVKKLSEQVFLPPRPPKVLGLQGLKEVTLLGQNVNSFRDNSEVQFNSAVPTNLSRG 300
Query: 199 --ARFSSEHAKVDFSDLLDKLSEIQGIERIRFTSPHPLHMNDGFLERFAKNPKVCKSIHM 256
+ ++ + F+ LLD++S + RIRFTSPHP D L+ + +CK IH+
Sbjct: 301 FTTNYKTKQGGLRFAHLLDQVSRVDPEMRIRFTSPHPKDFPDEVLQLIHERDNICKQIHL 360
Query: 257 PLQSGSSAVLKMMRRGYSKEWFLNRVERLKALVPEVGISTDIIVGFPNESDKDFEDTMEV 316
P QSGSS VL+ MRRGYS+E ++ V ++ +P V +S+D I GF E+++D T+ +
Sbjct: 361 PAQSGSSRVLEAMRRGYSREAYVELVHHIRESIPGVSLSSDFIAGFCGETEEDHVQTVSL 420
Query: 317 LEKVRFDTLYSFIYSPRPFTEA-GAWKERVPLEVSSSRLERLQNRHKEILEEKAKLEVGK 375
L +V+++ + F YS R T A K+ VP EV RLE L +E + + VG
Sbjct: 421 LREVQYNMGFLFAYSMRQKTRAYHRLKDDVPEEVKLRRLEELITIFREEATKANQTSVGC 480
Query: 376 THVVLVENRREMDNQIVGFEGRSDTGK---FIEVTCKEKRNPGELVKVE 421
T +VLVE + GR+D F + ++ NPG V+ +
Sbjct: 481 TQLVLVEGLSK--RSATDLCGRNDGNLKVIFPDAEMEDVNNPGLRVRAQ 527
>ref|NP_562591.1| (NC_003366) conserved hypothetical protein [Clostridium
perfringens]
dbj|BAB81381.1| (AP003191) conserved hypothetical protein [Clostridium perfringens]
Length = 445
Score = 208 bits (530), Expect = 9e-53
Identities = 131/392 (33%), Positives = 213/392 (53%), Gaps = 19/392 (4%)
Query: 2 KVYIETMGCAMNSRDSEHLLSELSKLDYKETNDPKTADLILINTCSVREKPERKLFSEIG 61
KV + ++GC N DSE +L + +Y+ TN+PK AD+I++NTC EK +++ + I
Sbjct: 5 KVGMVSLGCDKNRVDSEIMLGMVQN-EYELTNNPKEADIIIVNTCGFIEKAKQESINTIL 63
Query: 62 QFAKIKKP-NAKIGVC-GCTASHMGADILKKAPSVSFVLGARNVSKISQVI--------H 111
AK K N K+ + GC G ++L+ P + +LG + +KI++ I
Sbjct: 64 DMAKYKTSHNCKLLIATGCLTQRYGDELLELMPEIDIMLGVNDYAKINEAIMNFINGNNE 123
Query: 112 KEKAVEVA-IDYDESAYAFEFFEKKAQIRSLLNISIGCDKKCAYCIVPHTRGKEISIPMD 170
K KA + + +E + A +R I+ GCD C YCI+P RGK S ++
Sbjct: 124 KVKATNYSDVSINEGLRLITTDKATAYLR----IAEGCDNFCTYCIIPKIRGKFRSRALE 179
Query: 171 LILKEAEKLANNGTKELMLLGQNVNNYGARFSSEHAKVDFSDLLDKLSEIQGIERIRFTS 230
I++EA+KLA NG KEL+L+ Q+ NYG E +L +L++I+GIE IR
Sbjct: 180 SIVEEAKKLAENGVKELILIAQDTTNYGIDIYGEKK---LHLVLRELAKIEGIEWIRVLY 236
Query: 231 PHPLHMNDGFLERFAKNPKVCKSIHMPLQSGSSAVLKMMRRGYSKEWFLNRVERLKALVP 290
+P + D ++ + N KVC + +P+Q S+ VLK M R +KE + ++ L+ VP
Sbjct: 237 CYPEAIYDELIKEISVNDKVCNYLDLPIQHISNNVLKRMGRKTTKEEIIGKINDLRKNVP 296
Query: 291 EVGISTDIIVGFPNESDKDFEDTMEVLEKVRFDTLYSFIYSPRPFTEAGAWKERVPLEVS 350
+ + T +IVGFP ES +DF + + ++ ++ D + F YS T A ++++ EV
Sbjct: 297 NIVLRTSLIVGFPGESCEDFNELKDFIKTIKLDKVGVFTYSREEGTPAAIMEDQIDEEVK 356
Query: 351 SSRLERLQNRHKEILEEKAKLEVGKTHVVLVE 382
+R E + KE+ EE K +VG+ + VL+E
Sbjct: 357 KAREEEIMLLQKEVSEEINKNKVGREYDVLIE 388
>ref|NP_498290.1| (NM_065889) F25B5.5.p [Caenorhabditis elegans]
sp|Q09316|YQT5_CAEEL Hypothetical 61.3 kDa protein F25B5.5 in chromosome III
pir||T16145 hypothetical protein F25B5.5 - Caenorhabditis elegans
gb|AAC46526.1| (U23172) Hypothetical protein F25B5.5 [Caenorhabditis elegans]
Length = 547
Score = 203 bits (517), Expect = 3e-51
Identities = 135/465 (29%), Positives = 233/465 (50%), Gaps = 41/465 (8%)
Query: 7 TMGCAMNSRDSEHLLSELSKLDYKETNDPKTADLILINTCSVREKPERKLFSEIGQFAKI 66
T GC MN D E + S ++K + E++ + AD++L+ TCS+R+ E+K+++++ K+
Sbjct: 85 TYGCQMNVSDMEIVRSIMTKYGFVESDKKENADIVLLMTCSIRDGAEKKVWNQL----KL 140
Query: 67 KKPNAK-----IGVCGCTASHMGADILKKAPSVSFVLGARNVSKISQVIHK----EKAVE 117
+ N+ +GV GC A + D+L+K V+ V G + + +++ +
Sbjct: 141 IRSNSVNKGQIVGVLGCMAERVRHDLLEKRNLVNIVAGPDSYRDLPRLVAVAAGGSNGIN 200
Query: 118 VAIDYDES-AYAFEFFEKKAQIRSLLNISIGCDKKCAYCIVPHTRGKEISIPMDLILKEA 176
V + DE+ A A + ++I GCD C YC+VP TRG+E S P++ I++E
Sbjct: 201 VQLSLDETYADVQPIRVDSASKTAFISIMRGCDNMCTYCVVPFTRGRERSRPIESIVEEV 260
Query: 177 EKLANNGTKELMLLGQNVNNYGARFSSEHAK-----------------------VDFSDL 213
++L + G K++ LLGQNVN+Y S + + + F+ L
Sbjct: 261 QRLRDQGYKQVTLLGQNVNSYRDMTSMDFSMAPSTSQEDRVPGFKTVYKPKSGGLTFTTL 320
Query: 214 LDKLSEIQGIERIRFTSPHPLHMNDGFLERFAKNPKVCKSIHMPLQSGSSAVLKMMRRGY 273
L+K+++ R RFTSPHP +E A P +CK +H+P QSG L+ M RGY
Sbjct: 321 LEKVADAAPDIRFRFTSPHPKDFPMQLIELIASRPNLCKQLHLPAQSGDDETLERMERGY 380
Query: 274 SKEWFLNRVERLKALVPEVGISTDIIVGFPNESDKDFEDTMEVLEKVRFDTLYSFIYSPR 333
+++ +L V+ ++ ++P V +++D I GF E+++ ++T+ ++ VR+ + F YS R
Sbjct: 381 TRDLYLRLVDDIRHVLPSVSLTSDFIAGFCGETEQAHQNTLSLIRAVRYSFCFVFPYSMR 440
Query: 334 PFTEA-GAWKERVPLEVSSSRLERLQNRHKEILEEKAKLEVGKTHVVLVENRREMDNQIV 392
T A + VP +V + R L +E + + +G VL+E + + D
Sbjct: 441 GKTRAHHRLTDDVPEDVKARRHLDLTTVFREEALKLNQALIGSEQTVLLEGKSKRDASF- 499
Query: 393 GFEGRSDTG-KFIEVTCKEKRNPGELVKVEIISHSKGRLMAATKG 436
GR D G K + K PG+ K+ I + L A G
Sbjct: 500 -SHGRIDGGVKAVFDNSKLCLEPGQYAKILITDANSQTLKAQLIG 543
>ref|NP_057492.1| (NM_016408) hypothetical protein HSPC167; hypothetical protein;
CGI-05 protein [Homo sapiens]
gb|AAF29131.1|AF161516_1 (AF161516) HSPC167 [Homo sapiens]
Length = 586
Score = 203 bits (517), Expect = 3e-51
Identities = 146/467 (31%), Positives = 227/467 (48%), Gaps = 62/467 (13%)
Query: 2 KVYIETMGCAMNSRDSEHLLSELSKLDYKETNDPKTADLILINTCSVREKPERKLFSEIG 61
KVY+ET GC MN D+E S L K Y T++ + AD+IL+ TCS+REK E+ +++ +
Sbjct: 101 KVYLETYGCQMNVNDTEIAWSILQKSGYLRTSNLQEADVILLVTCSIREKAEQTIWNRLH 160
Query: 62 QFAKIK--KPNAK----IGVCGCTASHMGADILKKAPSVSFVLGA---RNVSKISQVIHK 112
Q +K +P ++ IG+ GC A + +IL + V + G R++ ++ +
Sbjct: 161 QLKALKTRRPRSRVPLRIGILGCMAERLKEEILNREKMVDILAGPDAYRDLPGCWLMLSR 220
Query: 113 EKAVEVAIDYDESAYAFEFFEKKAQIRSLLNISI--GCDKKCAYCIV------------P 158
+ ++ + +SI GCD C+YCIV P
Sbjct: 221 ASKLPTCCSLWTRPMLMSCQSRQGASATSAFVSIMRGCDNMCSYCIVLSPGAGRGVGLLP 280
Query: 159 HTRGKEISIPMDLILKEAEKLANNGTKELMLLGQNVNNYG-------------------- 198
H+RG E + LA G KE+ LLGQNVN++
Sbjct: 281 HSRGSEEAF-----------LA--GLKEVTLLGQNVNSFRDNSEVQFNSAVPTNLSRGFT 327
Query: 199 ARFSSEHAKVDFSDLLDKLSEIQGIERIRFTSPHPLHMNDGFLERFAKNPKVCKSIHMPL 258
+ ++ + F+ LLD++S + RIRFTSPHP D L+ + +CK IH+P
Sbjct: 328 TNYKTKQGGLRFAHLLDQVSRVDPEMRIRFTSPHPKDFPDEVLQLIHERDNICKQIHLPA 387
Query: 259 QSGSSAVLKMMRRGYSKEWFLNRVERLKALVPEVGISTDIIVGFPNESDKDFEDTMEVLE 318
QSGSS VL+ MRRGYS+E ++ V ++ +P V +S+D I GF E+++D T+ +L
Sbjct: 388 QSGSSRVLEAMRRGYSREAYVELVHHIRESIPGVSLSSDFIAGFCGETEEDHVQTVSLLR 447
Query: 319 KVRFDTLYSFIYSPRPFTEA-GAWKERVPLEVSSSRLERLQNRHKEILEEKAKLEVGKTH 377
+V+++ + F YS R T A K+ VP EV RLE L +E + + VG T
Sbjct: 448 EVQYNMGFLFAYSMRQKTRAYHRLKDDVPEEVKLRRLEELITIFREEASKANQTSVGCTQ 507
Query: 378 VVLVENRREMDNQIVGFEGRSDTGK---FIEVTCKEKRNPGELVKVE 421
+VLVE + GR+D F + ++ NPG V+ +
Sbjct: 508 LVLVEGLSK--RSATDLCGRNDGNLKVIFPDAEMEDVNNPGLRVRAQ 552
>ref|NP_213332.1| (NC_000918) hypothetical protein [Aquifex aeolicus]
sp|O66772|Y474_AQUAE Hypothetical protein AQ_474
pir||H70342 conserved hypothetical protein aq_474 - Aquifex aeolicus
gb|AAC06733.1| (AE000691) hypothetical protein [Aquifex aeolicus]
Length = 410
Score = 201 bits (512), Expect = 1e-50
Identities = 132/415 (31%), Positives = 218/415 (51%), Gaps = 16/415 (3%)
Query: 1 MKVYIETMGCAMNSRDSEHLLSELSKLDYKETNDPKTADLILINTCSVREKPERKLFSEI 60
MKV ET+GC MN D++ L ++ + Y+ + AD+ +INTC+V +R I
Sbjct: 1 MKVAFETLGCRMNQFDTDLLKNKFIQKGYEVVSFEDMADVYVINTCTVTVGGDRSSRQAI 60
Query: 61 GQFAKIKKPNAKIGVCGCTASHMGADILKKAPSVSFVLGARNVSKISQVIH-----KEKA 115
Q AK + P A + GC A + L K V V+G + S++ +++ +EK
Sbjct: 61 YQ-AKRRNPKAIVVATGCYAQ-VNPQELAKLKEVDLVVGNTHKSELLKILEEYLERREKK 118
Query: 116 VEVA-IDYDESAYAFEFFEKKAQIRSLLNISIGCDKKCAYCIVPHTRGKEISIPMDLILK 174
V V I ++ F+ +R L + GC+K C +C++P+ RGK S+ ++ I+
Sbjct: 119 VVVGEIFREKEVRNFDTVLYFEGVRPFLKVQEGCNKFCTFCVIPYARGKVRSVDLEKIVH 178
Query: 175 EAEKLANNGTKELMLLGQNVNNYGARFSSEHAKVDFSDLLDKLSEIQGIERIRFTSPHPL 234
+ + LA G KE++L G ++ YG + LL +L +I+GIE IR +S H
Sbjct: 179 QVKLLAQKGFKEVVLTGTQLSQYGW-----DKGYNLYTLLTELIKIEGIELIRLSSMHIK 233
Query: 235 HMNDGFLERFAKNPKVCKSIHMPLQSGSSAVLKMMRRGYSKEWFLNRVERLKALVPEVGI 294
M+ L+ K+ H+ LQSGS+ +L++M RGY++E + V + P I
Sbjct: 234 EMDKELLKLIVSEEKIAPHFHLSLQSGSNRILELMDRGYTREEYEEVVNFIVENRPISSI 293
Query: 295 STDIIVGFPNESDKDFEDTMEVLEKVRFDTLYSFIYSPRPFTEAGAWKERVPLEVSSSRL 354
TD+IVGFP ES++DF++T E L+++ ++ F YS RPFT+A K ++P + R+
Sbjct: 294 GTDVIVGFPTESEEDFQETYEFLKRIPISYMHIFPYSDRPFTKASKLKPKLPERIKKERV 353
Query: 355 ERLQNRHKEILEEKAKLEVGK--THVVLVENRREMDNQI-VGFEGRSDTGKFIEV 406
L+ ++ +E + GK +V+ ENR +N I + EG + GK + V
Sbjct: 354 RILKELDQKKRQEFYEKNKGKELRALVIEENRLLTENYIDIKREGYKEVGKLVRV 408
>ref|NP_562941.1| (NC_003366) conserved hypothetical protein [Clostridium
perfringens]
dbj|BAB81731.1| (AP003192) conserved hypothetical protein [Clostridium perfringens]
Length = 434
Score = 201 bits (512), Expect = 1e-50
Identities = 138/434 (31%), Positives = 225/434 (51%), Gaps = 22/434 (5%)
Query: 1 MKVYIETMGCAMNSRDSEHLLSELSKLDYKETNDPKTADLILINTCSVREKPERKLFSEI 60
MKV T+GC +N+ +SE + + + Y+ + + AD+ ++NTCSV ++K I
Sbjct: 1 MKVAFATLGCRVNTYESEAMTEKFVREGYEVVDFNEMADVYVVNTCSVTNMGDKKSRQII 60
Query: 61 GQFAKIKKPNAKIGVCGCTASHMGADILKKAPSVSFVLGARNVSKISQVIHK-----EKA 115
G+ A+ + P A I V GC A ++ V VLG+RN +I ++K ++
Sbjct: 61 GR-ARRQNPEAIIAVVGCYAQIAPTEV-SGIEGVDVVLGSRNKGEIVYYVNKARDEGKQQ 118
Query: 116 VEVAIDYDESAYA-FEFFEKKAQIRSLLNISIGCDKKCAYCIVPHTRGKEISIPMDLILK 174
V+V + + E + R+ L I GC++ CAYC++P+TRG S +L
Sbjct: 119 VKVGAVLKNKVFEDLKIEEYNNKTRAFLKIQDGCNRFCAYCLIPYTRGSVCSKDPKKVLD 178
Query: 175 EAEKLANNGTKELMLLGQNVNNYGARFSSEHAKVDFSDLLDKLSEIQGIERIRFTSPHPL 234
E LA +G KE++L G + +YG KV DLL+++ +I GIER+R S P
Sbjct: 179 EIRSLAEHGFKEIILSGIHTASYGVDLDE---KVTLVDLLEEIEKIDGIERVRIGSIDPT 235
Query: 235 HMNDGFLERFAKNPKVCKSIHMPLQSGSSAVLKMMRRGYSKEWFLNRVERLKALVPEVGI 294
+ + R K+C H+ LQSG A LK M R Y+ + + + V L+ + +V I
Sbjct: 236 FFTEDVVRRILALKKLCPHFHLSLQSGCDATLKRMNRRYTAKEYEDIVNLLRDKIEDVSI 295
Query: 295 STDIIVGFPNESDKDFEDTMEVLEKVRFDTLYSFIYSPRPFTEAGAWKERVPLEVSSSRL 354
+TD+IVGFP E+D++FE+T E L+++ + F YSPR T A + +V R
Sbjct: 296 TTDVIVGFPGETDEEFEETYEFLKRIALSKTHIFKYSPRKGTRAENMENQVDGNKKDERS 355
Query: 355 ERLQNRHKEILEEKAKLE--VGKTHVVLVENRREMDNQI-VGFEGRSDTGKFIEVTCKEK 411
++L ++ + EKA E +G+ VL E E+ + + G+ T +I+V K
Sbjct: 356 KKLIELNR--INEKAFAEKYIGEVIDVLFEEEVELGSGVYTGY-----TRNYIKVNAKAD 408
Query: 412 RN-PGELVKVEIIS 424
N G+++ V+I S
Sbjct: 409 CNVSGKILNVKINS 422
>ref|NP_228639.1| (NC_000853) conserved hypothetical protein [Thermotoga maritima]
sp|Q9WZT7|Y830_THEMA Hypothetical protein TM0830
pir||B72328 conserved hypothetical protein - Thermotoga maritima (strain MSB8)
gb|AAD35912.1|AE001750_6 (AE001750) conserved hypothetical protein [Thermotoga maritima]
Length = 434
Score = 199 bits (506), Expect = 5e-50
Identities = 129/385 (33%), Positives = 201/385 (51%), Gaps = 16/385 (4%)
Query: 3 VYIETMGCAMNSRDSEHLLSELSKLDYKETNDPKTADLILINTCSVREKPERKLFSEIGQ 62
V IET GC +N +SE++ +L K Y D A I +N+C+V ++ E+K+ I
Sbjct: 4 VRIETFGCKVNQYESEYMAEQLEKAGYVVLPDGNAAYYI-VNSCAVTKEVEKKVKRLIKS 62
Query: 63 FAKIKKPNAKIGVCGCTASHMGADILKKAPSVSFVLGARNVSKISQVIHKEKAVEVAIDY 122
K NAKI + GC A + D K P V VLG I I+ + +
Sbjct: 63 IRNRNK-NAKIILTGCFAQ-LSPDEAKNLP-VDMVLGIDEKKHIVDHINSLNGKQQVVVS 119
Query: 123 DESAYAFE----FFEKKAQIRSLLNISIGCDKKCAYCIVPHTRGKEI-SIPMDLILKEAE 177
+ +E FE + RS + + GCD C YC + RG I S P+++ +E
Sbjct: 120 EPGRPVYEKVKGSFEDRT--RSYIKVEDGCDNTCTYCAIRLARGTRIRSKPLEIFKEEFA 177
Query: 178 KLANNGTKELMLLGQNVNNYGARFSSEHAKVDFSDLLDKLSEIQGIERIRFTSPHPLHMN 237
++ G KE+++ G N+ YG S A +LL + ++ G R+R +S + +N
Sbjct: 178 EMVMKGYKEIVITGVNLGKYGKDMGSSLA-----ELLKVIEKVPGDYRVRLSSINVEDVN 232
Query: 238 DGFLERFAKNPKVCKSIHMPLQSGSSAVLKMMRRGYSKEWFLNRVERLKALVPEVGISTD 297
D ++ F +NP++C +H+ +QSGS VLK M R Y F+ V++L+++ P+ I+TD
Sbjct: 233 DEIVKAFKRNPRLCPHLHISVQSGSDDVLKRMGRKYKISDFMRVVDKLRSIDPDFSITTD 292
Query: 298 IIVGFPNESDKDFEDTMEVLEKVRFDTLYSFIYSPRPFTEAGAWKERVPLEVSSSRLERL 357
IIVGFP E+D DF+ T+E++EKV F ++ F +SPRP T A + VP RL+ L
Sbjct: 293 IIVGFPGETDADFQRTLELVEKVEFSRVHIFRFSPRPGTPASRMEGGVPESKKKERLDVL 352
Query: 358 QNRHKEILEEKAKLEVGKTHVVLVE 382
+ + K++ K +GK VL E
Sbjct: 353 KEKAKDVSIRYRKRIIGKERKVLAE 377
>ref|NP_604111.1| (NC_003454) Fe-S oxidoreductase [Fusobacterium nucleatum subsp.
nucleatum ATCC 25586]
gb|AAL95410.1| (AE010627) Fe-S oxidoreductase [Fusobacterium nucleatum subsp.
nucleatum ATCC 25586]
Length = 435
Score = 199 bits (506), Expect = 5e-50
Identities = 124/390 (31%), Positives = 208/390 (52%), Gaps = 12/390 (3%)
Query: 2 KVYIETMGCAMNSRDSEHLLSELSKLDYKETNDPKTADLILINTCSVREKPERKLFSEIG 61
KV T+GC +N ++E + ++L K Y+E +D+ +IN+C+V +RK + +
Sbjct: 6 KVAFHTLGCKVNQYETESIKNQLIKRGYEEVPFEDKSDIYIINSCTVTSIADRKTRNMLR 65
Query: 62 QFAKIKKPNAKIGVCGCTASHMGADILKKAPSVSFVLGARNVSKISQVIHKEKAVEVAID 121
+ KI P AK+ V GC A +IL+ V FV+ +N S I + + + +
Sbjct: 66 RAKKIN-PKAKVIVTGCYAQTNSREILE-IEDVDFVIDNKNKSNIVNFVGAIEDISFERE 123
Query: 122 -----YDESAYA-FEFFEKKAQIRSLLNISIGCDKKCAYCIVPHTRGKEISIPMDLILKE 175
+ E Y +EF + R+ + I GC+ C+YC +P RGK S + ILKE
Sbjct: 124 KNGNIFQEKEYQEYEFATLREMTRAYVKIQDGCNHFCSYCKIPFARGKSRSRKKENILKE 183
Query: 176 AEKLANNGTKELMLLGQNVNNYGARFSSEHAKVDFSDLLDKLSEIQGIERIRFTSPHPLH 235
EKL +G KE++L+G +++ YG F K +F LL+ + I+ ++R+R S +P
Sbjct: 184 IEKLVEDGFKEIILIGIDLSAYGEDFEE---KDNFESLLEDILRIKDLKRVRIGSVYPDK 240
Query: 236 MNDGFLERFAKNPKVCKSIHMPLQSGSSAVLKMMRRGYSKEWFLNRVERLKALVPEVGIS 295
+ D F+E F KN K+ +H+ LQS VLK MRR Y + +LK+ V ++ +
Sbjct: 241 ITDRFIELF-KNKKLMPHLHISLQSCDDTVLKNMRRNYGSSLIKKSLLKLKSKVKDMEFT 299
Query: 296 TDIIVGFPNESDKDFEDTMEVLEKVRFDTLYSFIYSPRPFTEAGAWKERVPLEVSSSRLE 355
D+IVGFP E + F++T +V++++ F L+ F YS R T A ++ ++ R +
Sbjct: 300 ADVIVGFPKEDEIMFQNTYDVIKEIEFSGLHIFQYSDREGTIASNMDGKIDVKTKKQRAD 359
Query: 356 RLQNRHKEILEEKAKLEVGKTHVVLVENRR 385
RL + +E++ + K + K+ VLVE +
Sbjct: 360 RLDSLKQEMIVDSRKKYLEKSLEVLVEEEK 389
>ref|NP_242217.1| (NC_002570) BH1351~unknown conserved protein [Bacillus halodurans]
dbj|BAB05070.1| (AP001511) BH1351~unknown conserved protein [Bacillus halodurans]
Length = 448
Score = 197 bits (501), Expect = 2e-49
Identities = 125/426 (29%), Positives = 224/426 (52%), Gaps = 13/426 (3%)
Query: 3 VYIETMGCAMNSRDSEHLLSELSKLDYKETNDPKTADLILINTCSVREKPERKLFSEIGQ 62
V +T+GC +N ++E + Y++ + + AD+ +INTC+V ++K I +
Sbjct: 4 VAFQTLGCKVNHYETEAIWQLFKGEGYEKVDFEQMADVYVINTCTVTNTGDKKSRQVIRR 63
Query: 63 FAKIKKPNAKIGVCGCTASHMGADILKKAPSVSFVLGARNVSKISQVIHKEKAVEVAIDY 122
+ K P+A I V GC A A+++ P V V+G ++ K+ + I + K I+
Sbjct: 64 AIR-KNPDAVICVTGCYAQTSPAEVMA-IPGVDIVVGTQDRKKMLEYIEQYKKERQPING 121
Query: 123 DESAYAFEFFEK------KAQIRSLLNISIGCDKKCAYCIVPHTRGKEISIPMDLILKEA 176
+ +E+ + R+ L I GC+ C +CI+P RG S ++K+A
Sbjct: 122 VGNIMKSRVYEELDVPAFTDRTRASLKIQEGCNNFCTFCIIPWARGLMRSRDPKEVIKQA 181
Query: 177 EKLANNGTKELMLLGQNVNNYGARFSSEHAKVDFSDLLDKLSEIQGIERIRFTSPHPLHM 236
E+L G KE++L G + YG + LL+ L ++ G++RIR +S +
Sbjct: 182 EQLVQAGYKEIVLTGIHTGGYGEDLKD----YSLARLLEDLEQVNGLKRIRISSIEASQL 237
Query: 237 NDGFLERFAKNPKVCKSIHMPLQSGSSAVLKMMRRGYSKEWFLNRVERLKALVPEVGIST 296
D +E ++ KV + +H+PLQSGS VLK MRR Y+ +F R+ERL+ +P + +++
Sbjct: 238 TDEVIEVIDRSTKVVRHLHIPLQSGSDTVLKRMRRKYTMAFFAERLERLREALPGLAVTS 297
Query: 297 DIIVGFPNESDKDFEDTMEVLEKVRFDTLYSFIYSPRPFTEAGAWKERVPLEVSSSRLER 356
D+IVGFP E++ +F++T + + K +F L+ F YS R T A +++V +V + R+ R
Sbjct: 298 DVIVGFPGETEAEFQETYDFIAKHKFSELHVFPYSKRTGTPAARMEDQVNEDVKNERVHR 357
Query: 357 LQNRHKEILEEKAKLEVGKTHVVLVENRREMDNQIVGFEGRSDTGKFIEVTCKEKRNPGE 416
L ++ +E A G+ ++ E R + + + G +D +++ ++ G+
Sbjct: 358 LIQLSDQLAKEYASQFEGEVLEMIPEERDKEEPNSGLYVGYTDNYLKVKIPATDEM-IGK 416
Query: 417 LVKVEI 422
LVKV+I
Sbjct: 417 LVKVKI 422
>ref|NP_224460.1| (NC_000922) conserved hypothetical protein [Chlamydophila
pneumoniae CWL029]
pir||G72101 conserved hypothetical protein - Chlamydophila pneumoniae (strain
CWL029)
gb|AAD18404.1| (AE001610) conserved hypothetical protein [Chlamydophila pneumoniae
CWL029]
Length = 500
Score = 196 bits (499), Expect = 3e-49
Identities = 119/397 (29%), Positives = 211/397 (52%), Gaps = 12/397 (3%)
Query: 2 KVYIETMGCAMNSRDSEHLLSELSKLDYKETNDPKTADLILINTCSVREKPERKLFSEIG 61
K++ ++GC+ N DSE +L L K Y+ TN+ + AD +++NTC+ + + +
Sbjct: 49 KIHFISLGCSRNLVDSEVMLGILLKAGYESTNEIEDADYLILNTCAFLKSARDEAKDYLD 108
Query: 62 QFAKIKKPNAKIGVCGCTASHMGADILKKAPSVSFVLGARNVSKISQVIHKEKAVEVAID 121
+KK NAKI V GC S+ ++ + ++LG+ +V I I ++ E
Sbjct: 109 HLIDVKKENAKIIVTGCMTSNHKDELKPWMSHIHYLLGSGDVENILSAIESRESGEKI-- 166
Query: 122 YDESAYAF-EFFEKKAQIRS-----LLNISIGCDKKCAYCIVPHTRGKEISIPMDLILKE 175
SA ++ E E Q+ + L ++ GC K+CA+CI+P +GK S P+D ILKE
Sbjct: 167 ---SAKSYIEMGEVPRQLSTPKHYAYLKVAEGCRKRCAFCIIPSIKGKLRSKPLDQILKE 223
Query: 176 AEKLANNGTKELMLLGQNVNNYGARFSSEHAKVDFSDLLDKLSEIQGIERIRFTSPHPLH 235
L N KE++L+ Q++ +YG S++ + LL +L + G +R +P
Sbjct: 224 FRILVNKSVKEIILIAQDLGDYGKDLSTDRSS-QLESLLHELLKEPGDYWLRMLYLYPDE 282
Query: 236 MNDGFLERFAKNPKVCKSIHMPLQSGSSAVLKMMRRGYSKEWFLNRVERLKALVPEVGIS 295
++DG ++ NPK+ + +PLQ + +LK MRR S+E L +E+L+A VP+V I
Sbjct: 283 VSDGIIDLMQSNPKLLPYVDIPLQHINDRILKQMRRTTSREQILGFLEKLRAKVPQVYIR 342
Query: 296 TDIIVGFPNESDKDFEDTMEVLEKVRFDTLYSFIYSPRPFTEAGAWKERVPLEVSSSRLE 355
+ +IVGFP E+ ++F++ + + + D L F+YS T A +++P +V SRL+
Sbjct: 343 SSVIVGFPGETQEEFQELADFIGEGWIDNLGIFLYSQEANTPAAELPDQIPEKVKESRLK 402
Query: 356 RLQNRHKEILEEKAKLEVGKTHVVLVENRREMDNQIV 392
L K +++ + +G+ +++N N ++
Sbjct: 403 ILSQIQKRNVDKHNQKLIGEKIEAVIDNYHPETNLLL 439
>ref|NP_445054.1| (NC_002179) conserved hypothetical protein [Chlamydophila
pneumoniae AR39]
pir||A81571 conserved hypothetical protein CP0510 [imported] - Chlamydophila
pneumoniae (strain AR39)
gb|AAF38338.1| (AE002211) conserved hypothetical protein [Chlamydophila pneumoniae
AR39]
Length = 503
Score = 196 bits (499), Expect = 3e-49
Identities = 119/397 (29%), Positives = 211/397 (52%), Gaps = 12/397 (3%)
Query: 2 KVYIETMGCAMNSRDSEHLLSELSKLDYKETNDPKTADLILINTCSVREKPERKLFSEIG 61
K++ ++GC+ N DSE +L L K Y+ TN+ + AD +++NTC+ + + +
Sbjct: 52 KIHFISLGCSRNLVDSEVMLGILLKAGYESTNEIEDADYLILNTCAFLKSARDEAKDYLD 111
Query: 62 QFAKIKKPNAKIGVCGCTASHMGADILKKAPSVSFVLGARNVSKISQVIHKEKAVEVAID 121
+KK NAKI V GC S+ ++ + ++LG+ +V I I ++ E
Sbjct: 112 HLIDVKKENAKIIVTGCMTSNHKDELKPWMSHIHYLLGSGDVENILSAIESRESGEKI-- 169
Query: 122 YDESAYAF-EFFEKKAQIRS-----LLNISIGCDKKCAYCIVPHTRGKEISIPMDLILKE 175
SA ++ E E Q+ + L ++ GC K+CA+CI+P +GK S P+D ILKE
Sbjct: 170 ---SAKSYIEMGEVPRQLSTPKHYAYLKVAEGCRKRCAFCIIPSIKGKLRSKPLDQILKE 226
Query: 176 AEKLANNGTKELMLLGQNVNNYGARFSSEHAKVDFSDLLDKLSEIQGIERIRFTSPHPLH 235
L N KE++L+ Q++ +YG S++ + LL +L + G +R +P
Sbjct: 227 FRILVNKSVKEIILIAQDLGDYGKDLSTDRSS-QLESLLHELLKEPGDYWLRMLYLYPDE 285
Query: 236 MNDGFLERFAKNPKVCKSIHMPLQSGSSAVLKMMRRGYSKEWFLNRVERLKALVPEVGIS 295
++DG ++ NPK+ + +PLQ + +LK MRR S+E L +E+L+A VP+V I
Sbjct: 286 VSDGIIDLMQSNPKLLPYVDIPLQHINDRILKQMRRTTSREQILGFLEKLRAKVPQVYIR 345
Query: 296 TDIIVGFPNESDKDFEDTMEVLEKVRFDTLYSFIYSPRPFTEAGAWKERVPLEVSSSRLE 355
+ +IVGFP E+ ++F++ + + + D L F+YS T A +++P +V SRL+
Sbjct: 346 SSVIVGFPGETQEEFQELADFIGEGWIDNLGIFLYSQEANTPAAELPDQIPEKVKESRLK 405
Query: 356 RLQNRHKEILEEKAKLEVGKTHVVLVENRREMDNQIV 392
L K +++ + +G+ +++N N ++
Sbjct: 406 ILSQIQKRNVDKHNQKLIGEKIEAVIDNYHPETNLLL 442
>ref|NP_300310.1| (NC_002491) conserved hypothetical protein [Chlamydophila
pneumoniae J138]
dbj|BAA98461.1| (AP002545) conserved hypothetical protein [Chlamydophila pneumoniae
J138]
Length = 500
Score = 196 bits (499), Expect = 3e-49
Identities = 119/397 (29%), Positives = 211/397 (52%), Gaps = 12/397 (3%)
Query: 2 KVYIETMGCAMNSRDSEHLLSELSKLDYKETNDPKTADLILINTCSVREKPERKLFSEIG 61
K++ ++GC+ N DSE +L L K Y+ TN+ + AD +++NTC+ + + +
Sbjct: 49 KIHFISLGCSRNLVDSEVMLGILLKAGYESTNEIEDADYLILNTCAFLKSARDEAKDYLD 108
Query: 62 QFAKIKKPNAKIGVCGCTASHMGADILKKAPSVSFVLGARNVSKISQVIHKEKAVEVAID 121
+KK NAKI V GC S+ ++ + ++LG+ +V I I ++ E
Sbjct: 109 HLIDVKKENAKIIVTGCMTSNHKDELKPWMSHIHYLLGSGDVENILSAIESRESGEKI-- 166
Query: 122 YDESAYAF-EFFEKKAQIRS-----LLNISIGCDKKCAYCIVPHTRGKEISIPMDLILKE 175
SA ++ E E Q+ + L ++ GC K+CA+CI+P +GK S P+D ILKE
Sbjct: 167 ---SAKSYIEMGEVPRQLSTPKHYAYLKVAEGCRKRCAFCIIPSIKGKLRSKPLDQILKE 223
Query: 176 AEKLANNGTKELMLLGQNVNNYGARFSSEHAKVDFSDLLDKLSEIQGIERIRFTSPHPLH 235
L N KE++L+ Q++ +YG S++ + LL +L + G +R +P
Sbjct: 224 FRILVNKSVKEIILIAQDLGDYGKDLSTDRSS-QLESLLHELLKEPGDYWLRMLYLYPDE 282
Query: 236 MNDGFLERFAKNPKVCKSIHMPLQSGSSAVLKMMRRGYSKEWFLNRVERLKALVPEVGIS 295
++DG ++ NPK+ + +PLQ + +LK MRR S+E L +E+L+A VP+V I
Sbjct: 283 VSDGIIDLMQSNPKLLPYVDIPLQHINDRILKQMRRTTSREQILGFLEKLRAKVPQVYIR 342
Query: 296 TDIIVGFPNESDKDFEDTMEVLEKVRFDTLYSFIYSPRPFTEAGAWKERVPLEVSSSRLE 355
+ +IVGFP E+ ++F++ + + + D L F+YS T A +++P +V SRL+
Sbjct: 343 SSVIVGFPGETQEEFQELADFIGEGWIDNLGIFLYSQEANTPAAELPDQIPEKVKESRLK 402
Query: 356 RLQNRHKEILEEKAKLEVGKTHVVLVENRREMDNQIV 392
L K +++ + +G+ +++N N ++
Sbjct: 403 ILSQIQKRNVDKHNQKLIGEKIEAVIDNYHPETNLLL 439
>ref|NP_622614.1| (NC_003869) 2-methylthioadenine synthetase [Thermoanaerobacter
tengcongensis]
gb|AAM24218.1| (AE013061) 2-methylthioadenine synthetase [Thermoanaerobacter
tengcongensis]
Length = 437
Score = 195 bits (496), Expect = 8e-49
Identities = 129/420 (30%), Positives = 218/420 (51%), Gaps = 28/420 (6%)
Query: 2 KVYIETMGCAMNSRDSEHLLSELSKLDYKETNDPKTADLILINTCSVREKPERKLFSEIG 61
KV T+GC +N ++E + K Y+ + + AD+ +INTCSV + + K I
Sbjct: 3 KVAFYTLGCKVNQYETEVMAELFRKAGYEIVDFDEIADVYVINTCSVTARSDMKSRQMIR 62
Query: 62 QFAKIKKPNAKIGVCGCTASHMGADILKKAPSVSFVLGARNVSKISQVIH-------KEK 114
+ + K P+A + GC + D + P V V+G ++ KI ++ K K
Sbjct: 63 K-TRNKNPDAIVVAVGCYVQ-VSPDEVFSMPEVDIVIGTKDKDKIVDLVKDFENEKKKTK 120
Query: 115 AVEVAI---DYDESAYAFEFFEKKAQIRSLLNISIGCDKKCAYCIVPHTRGKEISIPMDL 171
+E + DY+E F + R+ + I GC++ C YCI+P+ RG S +
Sbjct: 121 LIENIMKQRDYEE----FGITGYTERTRAYIKIEDGCNQYCTYCIIPYARGPVRSRKPEN 176
Query: 172 ILKEAEKLANNGTKELMLLGQNVNNYGARFSSEHAKVDFSDLLDKLSEIQGIERIRFTSP 231
I+KE +K A +G KE++L G ++ +YG + + D++ + E++GIERIR +S
Sbjct: 177 IIKEVKKYAEHGYKEIVLTGIHIASYGRDLKN----IGLLDVIKMVHEVEGIERIRISSI 232
Query: 232 HPLHMNDGFLERFAKNPKVCKSIHMPLQSGSSAVLKMMRRGYSKEWFLNRVERLKALVPE 291
P + + ++ A PK+C+ H+ LQSG LK M R Y+ + VERL+ +P+
Sbjct: 233 EPTFLTEDVVKELANLPKMCRHYHVSLQSGCDETLKRMGRKYTASEYKEVVERLRRYIPD 292
Query: 292 VGISTDIIVGFPNESDKDFEDTMEVLEKVRFDTLYSFIYSPRPFTEAGAWKERVPLEVSS 351
V I+TDI+VGFP E++++FE + + E++ F ++ F YS R T A + +VP +V
Sbjct: 293 VAITTDIMVGFPGETEEEFEKSYKFAEEICFAKMHVFKYSRRKGTRAYNFPNQVPNKVKE 352
Query: 352 SRLERLQNRHKEILEEKAKLE-VGKTHVVLVENR-REMDNQIVGFEGRSDTGKFIEVTCK 409
R ++L K + E K K + +T VL E + +++D + G T ++ V K
Sbjct: 353 ERSKKLLQLSK-VCERKFKERFLNRTVEVLFEQKVKDLDGYVEGL-----TDNYLSVAVK 406
>ref|NP_300532.1| (NC_002491) hypothetical protein [Chlamydophila pneumoniae J138]
ref|NP_444827.1| (NC_002179) conserved hypothetical protein [Chlamydophila
pneumoniae AR39]
sp|Q9Z874|Y477_CHLPN Hypothetical protein CPn0477/CP0277/CPj0477
pir||G81594 conserved hypothetical protein CP0277 [imported] - Chlamydophila
pneumoniae (strain AR39)
gb|AAF38135.1| (AE002186) conserved hypothetical protein [Chlamydophila pneumoniae
AR39]
dbj|BAA98683.1| (AP002546) hypothetical protein [Chlamydophila pneumoniae J138]
Length = 421
Score = 195 bits (495), Expect = 1e-48
Identities = 121/378 (32%), Positives = 200/378 (52%), Gaps = 22/378 (5%)
Query: 8 MGCAMNSRDSEHLLSELSKLDYKETNDPKT-ADLILINTCSVREKPERKLFSEIGQFAKI 66
+GC +N + + +L+ L Y+E D + ADL +INTC+V E + Q +
Sbjct: 15 LGCRVNQYEVQAYRDQLTILGYQEVLDSEIPADLCIINTCAVTASAESSGRHAVRQLCR- 73
Query: 67 KKPNAKIGVCGCTASHMGADILKKAPSVSFVLGARNVSKISQVIHKEKAVEVAIDYDESA 126
+ P A I V GC L ++ F R + +S K + +E YD +
Sbjct: 74 QNPTAHIVVTGC---------LGESDKEFFASLDRQCTLVSNK-EKSRLIEKIFSYDTTF 123
Query: 127 YAFEFFEKKAQIRSLLNISIGCDKKCAYCIVPHTRGKEISIPMDLILKEAEKLANNGTKE 186
F+ + + R+ + + GC+ C+YCI+P+ RG+ +S P + IL E + + G +E
Sbjct: 124 PEFKIHSFEGKSRAFIKVQDGCNSFCSYCIIPYLRGRSVSRPAEKILAEIAGVVDQGYRE 183
Query: 187 LMLLGQNVNNY--GARFSSEHAKVDFSDLLDKLSEIQGIERIRFTSPHPLHMNDGFLERF 244
+++ G NV +Y G R + L++++ +I GIERIR +S P + +
Sbjct: 184 VVIAGINVGDYCDGER--------SLASLIEQVDQIPGIERIRISSIDPDDITEDLHRAI 235
Query: 245 AKNPKVCKSIHMPLQSGSSAVLKMMRRGYSKEWFLNRVERLKALVPEVGISTDIIVGFPN 304
+ C S H+ LQSGS+++LK M R YS+ FL+ VE+ +A P +TD+IVGFP
Sbjct: 236 TSSRHTCPSSHLVLQSGSNSILKRMNRKYSRGDFLDCVEKFRASDPRYAFTTDVIVGFPG 295
Query: 305 ESDKDFEDTMEVLEKVRFDTLYSFIYSPRPFTEAGAWKERVPLEVSSSRLERLQNRHKEI 364
ESD+DFEDT+ ++E V F ++SF +S R T+A + ++P +V R + L K +
Sbjct: 296 ESDQDFEDTLRIIEDVGFIKVHSFPFSARRRTKAYTFDNQIPNQVIYERKKYLAEVAKRV 355
Query: 365 LEEKAKLEVGKTHVVLVE 382
+++ +G+T VLVE
Sbjct: 356 GQKEMMKRLGETTEVLVE 373
>ref|NP_224673.1| (NC_000922) Hypothetical Protein [Chlamydophila pneumoniae CWL029]
pir||G72074 hypothetical protein - Chlamydophila pneumoniae (strain CWL029)
gb|AAD18617.1| (AE001632) Hypothetical Protein [Chlamydophila pneumoniae CWL029]
Length = 421
Score = 194 bits (493), Expect = 2e-48
Identities = 121/378 (32%), Positives = 199/378 (52%), Gaps = 22/378 (5%)
Query: 8 MGCAMNSRDSEHLLSELSKLDYKETNDPKT-ADLILINTCSVREKPERKLFSEIGQFAKI 66
+GC +N + + +L+ L Y+E D + ADL +INTC+V E + Q +
Sbjct: 15 LGCRVNQYEVQAYRDQLTILGYQEVLDSEIPADLCIINTCAVTASAESSGRHAVRQLCR- 73
Query: 67 KKPNAKIGVCGCTASHMGADILKKAPSVSFVLGARNVSKISQVIHKEKAVEVAIDYDESA 126
+ P A I V GC L ++ F R + +S K + +E YD +
Sbjct: 74 QNPTAHIVVTGC---------LGESDKEFFASLDRQCTLVSNK-EKSRLIEKIFSYDTTF 123
Query: 127 YAFEFFEKKAQIRSLLNISIGCDKKCAYCIVPHTRGKEISIPMDLILKEAEKLANNGTKE 186
F+ + + R+ + + GC+ C+YCI+P+ RG+ +S P + IL E + + G +E
Sbjct: 124 PEFKIHSFEGKSRAFIKVQDGCNSFCSYCIIPYLRGRSVSRPAEKILAEIAGVVDQGYRE 183
Query: 187 LMLLGQNVNNY--GARFSSEHAKVDFSDLLDKLSEIQGIERIRFTSPHPLHMNDGFLERF 244
+++ G NV +Y G R + L++++ I GIERIR +S P + +
Sbjct: 184 VVIAGINVGDYCDGER--------SLASLIEQVDRIPGIERIRISSIDPDDITEDLHRAI 235
Query: 245 AKNPKVCKSIHMPLQSGSSAVLKMMRRGYSKEWFLNRVERLKALVPEVGISTDIIVGFPN 304
+ C S H+ LQSGS+++LK M R YS+ FL+ VE+ +A P +TD+IVGFP
Sbjct: 236 TSSRHTCPSSHLVLQSGSNSILKRMNRKYSRGDFLDCVEKFRASDPRYAFTTDVIVGFPG 295
Query: 305 ESDKDFEDTMEVLEKVRFDTLYSFIYSPRPFTEAGAWKERVPLEVSSSRLERLQNRHKEI 364
ESD+DFEDT+ ++E V F ++SF +S R T+A + ++P +V R + L K +
Sbjct: 296 ESDQDFEDTLRIIEDVGFIKVHSFPFSARRRTKAYTFDNQIPNQVIYERKKYLAEVAKRV 355
Query: 365 LEEKAKLEVGKTHVVLVE 382
+++ +G+T VLVE
Sbjct: 356 GQKEMMKRLGETTEVLVE 373
>ref|NP_348438.1| (NC_003030) Predicted Fe-S oxidoreductase [Clostridium
acetobutylicum]
gb|AAK79778.1|AE007690_5 (AE007690) Predicted Fe-S oxidoreductase [Clostridium
acetobutylicum]
Length = 445
Score = 194 bits (492), Expect = 2e-48
Identities = 119/388 (30%), Positives = 201/388 (51%), Gaps = 10/388 (2%)
Query: 1 MKVYIETMGCAMNSRDSEHLLSELSKLDYKETNDPKTADLILINTCSVREKPERKLFSEI 60
+K + ++GC N DSE +L +++ DY+ NDP+ AD+IL+NTC E +++ + I
Sbjct: 4 LKFGLVSLGCDKNRVDSEIILGSMNR-DYEIVNDPREADVILVNTCGFIESAKQESINTI 62
Query: 61 GQFAKIK-KPNAKIGVC-GCTASHMGADILKKAPSVSFVLGARNVSKISQVIHKEKAV-- 116
+ K K K N K+ + GC G ++ + P + +LG + + I +
Sbjct: 63 LEMNKYKEKYNCKMLIATGCLTQRYGKELKELVPEIDAILGVNDYKSLDDAIEDFFNLGK 122
Query: 117 -EVAIDY-DESAYAFEFFEKKAQIRSLLNISIGCDKKCAYCIVPHTRGKEISIPMDLILK 174
++ +Y D+S + + S + IS GC+ C+YCI+P RGK S + I+
Sbjct: 123 KDIYCNYSDQSINEGKRIITTGEYSSYVRISEGCNNSCSYCIIPKIRGKYRSRQFENIID 182
Query: 175 EAEKLANNGTKELMLLGQNVNNYGARFSSEHAKVDFSDLLDKLSEIQGIERIRFTSPHPL 234
E +L+ NGTKE++L+ Q+ YG + + +LL ++S IQGIE IR +P
Sbjct: 183 EVRELSENGTKEVILIAQDTTRYGVDL---YGRKRLHELLKEMSLIQGIEWIRIMYCYPE 239
Query: 235 HMNDGFLERFAKNPKVCKSIHMPLQSGSSAVLKMMRRGYSKEWFLNRVERLKALVPEVGI 294
+ + +E A N KVC I MP+Q S +LK M R K L++VE+++ VP + I
Sbjct: 240 EITEELIEEIASNEKVCNYIDMPIQHISDNILKNMFRKTRKSEILDKVEKIRKKVPNIAI 299
Query: 295 STDIIVGFPNESDKDFEDTMEVLEKVRFDTLYSFIYSPRPFTEAGAWKERVPLEVSSSRL 354
T +IVGFP E++ DF + + ++ + L F YS T+A ++ V R
Sbjct: 300 RTSLIVGFPGETEGDFNELCDFVKDANINNLGVFRYSREEGTKAALMPMQIADTVKEKRE 359
Query: 355 ERLQNRHKEILEEKAKLEVGKTHVVLVE 382
E + +++ + ++GK + V+VE
Sbjct: 360 EDIMLIQQQVSKNLNAKKIGKVYKVIVE 387
>ref|NP_622995.1| (NC_003869) 2-methylthioadenine synthetase [Thermoanaerobacter
tengcongensis]
gb|AAM24599.1| (AE013097) 2-methylthioadenine synthetase [Thermoanaerobacter
tengcongensis]
Length = 436
Score = 193 bits (491), Expect = 3e-48
Identities = 126/430 (29%), Positives = 217/430 (50%), Gaps = 17/430 (3%)
Query: 3 VYIETMGCAMNSRDSEHLLSELSKLDYKETNDPKTADLILINTCSVREKPERKLFSEIGQ 62
V I ++GC NS DSE +L+ L + Y ND K AD+I+INTC+ E +++ I Q
Sbjct: 4 VGIISLGCPKNSVDSEKMLALLKEKGYNIVNDEKKADVIIINTCAFIEDAKKESIEYIIQ 63
Query: 63 FAKIKKPNAKIGVC-GCTASHMGADILKKAPSVSFVLGARNVSKISQVIHKEKAVEVAID 121
++KK K + GC + +++K+ P + V+G + ++I VI + K + +
Sbjct: 64 MGELKKKRLKYLIATGCLSERYNKELIKELPELDAVIGTGDFTQIVDVIEEVKKGKKVLK 123
Query: 122 YDESAYAFEFFEKKAQIRSL--------LNISIGCDKKCAYCIVPHTRGKEISIPMDLIL 173
Y + + R L L I+ GC C++CI+P RGK S M+ I+
Sbjct: 124 YGHP----DLLNDEGIPRILTTPPYYAYLKIAEGCSNACSFCIIPKLRGKYKSRKMENII 179
Query: 174 KEAEKLANNGTKELMLLGQNVNNYGARFSSEHAKVDFSDLLDKLSEIQGIERIRFTSPHP 233
+EA++LA G KEL+++ Q+ YG + K+ LL +LS+I+ ++ IR +P
Sbjct: 180 EEAQELARKGVKELIIIAQDTTKYGIDL---YKKLMLPQLLRELSKIEELKWIRLLYAYP 236
Query: 234 LHMNDGFLERFAKNPKVCKSIHMPLQSGSSAVLKMMRRGYSKEWFLNRVERLKALVPEVG 293
+ D +E N K+ K I +PLQ S +VLK M RG ++ + +L++ +P +
Sbjct: 237 DSVTDELIEEIKNNQKIVKYIDIPLQHSSESVLKRMNRGTTRRKIEEVISKLRS-IPGMV 295
Query: 294 ISTDIIVGFPNESDKDFEDTMEVLEKVRFDTLYSFIYSPRPFTEAGAWKERVPLEVSSSR 353
+ T +VGFP E++++FED +++ RF+ + F YS T++ K ++ +V R
Sbjct: 296 MRTTFMVGFPGETEEEFEDLKNFIKEKRFERVGVFTYSREEGTKSYYMKPQIRKKVKLKR 355
Query: 354 LERLQNRHKEILEEKAKLEVGKTHVVLVENRREMDNQIVGFEGRSDTGKFIEVTCKEKRN 413
E L K+I E ++G VL+E + + + + V +K
Sbjct: 356 QEELMEIQKQISYEFNMSKIGTKLEVLIEGFEDGVYYGRSYMDAPEIDGLVYVRSDKKLF 415
Query: 414 PGELVKVEII 423
PG+ V V ++
Sbjct: 416 PGDFVTVTVV 425
>ref|NP_658342.1| (NC_003995) UPF0004, Uncharacterized protein family UPF0004
[Bacillus anthracis A2012] [Bacillus anthracis str.
A2012]
Length = 450
Score = 192 bits (488), Expect = 7e-48
Identities = 129/431 (29%), Positives = 229/431 (52%), Gaps = 20/431 (4%)
Query: 3 VYIETMGCAMNSRDSEHLLSELSKLDYKETNDPKTADLILINTCSVREKPERKLFSEIGQ 62
V T+GC +N ++E + + Y+ T K AD+ +INTC+V ++K I +
Sbjct: 4 VAFHTLGCKVNHYETEAIWQLFKQGGYERTEYEKKADVYVINTCTVTNTGDKKSRQVIRR 63
Query: 63 FAKIKKPNAKIGVCGCTASHMGADILKKAPSVSFVLGARNVSKISQVIHKEKAVEVAIDY 122
+ + P+A I V GC A A+I+ P V V+G ++ K+ I + + I+
Sbjct: 64 AVR-QNPDAVICVTGCYAQTSPAEIMA-IPGVDIVVGTQDREKMLGYIEEFRKERQPINA 121
Query: 123 DESAYAFEFFEK------KAQIRSLLNISIGCDKKCAYCIVPHTRGKEISIPMDLILKEA 176
+ +E+ + R+ L I GC+ C +CI+P RG S ++K+A
Sbjct: 122 VRNIMKTRVYEELDVPYFTDRTRASLKIQEGCNNFCTFCIIPWARGLMRSRDGKEVIKQA 181
Query: 177 EKLANNGTKELMLLGQNVNNYGARFSSEHAKVDFSDLLDKLSEIQGIERIRFTSPHPLHM 236
++L + G KE++L G + YG + L D +E+ G++R+R +S +
Sbjct: 182 QQLVDAGYKEIVLTGIHTGGYGEDIKDYNLA---GLLRDMEAEVGGLKRLRISSIEASQI 238
Query: 237 NDGFLERFAKNPKVCKSIHMPLQSGSSAVLKMMRRGYSKEWFLNRVERLKALVPEVGIST 296
+D +E K+ V + +H+PLQSGS+ VLK MRR Y+ E+F R++RLK +P + I++
Sbjct: 239 SDEVIEVLDKSEVVVRHLHIPLQSGSNTVLKRMRRKYTMEFFQERLDRLKEALPGLAITS 298
Query: 297 DIIVGFPNESDKDFEDTMEVLEKVRFDTLYSFIYSPRPFTEAGAWKERVPLEVSSSRLER 356
D+IVGFP E++++F +T +++ RF L+ F YS R T A +++VP +V + R+ R
Sbjct: 299 DVIVGFPGETEEEFMETYNFIKENRFSELHVFPYSKRTGTPAARMEDQVPEDVKNDRVHR 358
Query: 357 LQNRHKEILEEKAKLEVGKTHVVLVENR-REMDNQ--IVGFEGRSDTGKFIEVTCK-EKR 412
L ++ +E A G+ ++ E + +E D + VG+ T ++++ + +
Sbjct: 359 LIELSNQLAKEYASQFEGEVLEIIPEEQFKEGDREGLYVGY-----TDNYLKIVFEGSEE 413
Query: 413 NPGELVKVEII 423
G+LVKV+I+
Sbjct: 414 LIGKLVKVKIM 424
>ref|NP_390421.1| (NC_000964) similar to hypothetical proteins [Bacillus subtilis]
sp|P54462|YQEV_BACSU Hypothetical protein yqeV
pir||E69952 conserved hypothetical protein yqeV - Bacillus subtilis
dbj|BAA12468.1| (D84432) YqeV [Bacillus subtilis]
dbj|BAA12080.1| (D83717) YqeV [Bacillus subtilis]
emb|CAB14485.1| (Z99117) similar to hypothetical proteins [Bacillus subtilis]
Length = 451
Score = 190 bits (483), Expect = 2e-47
Identities = 123/432 (28%), Positives = 229/432 (52%), Gaps = 22/432 (5%)
Query: 3 VYIETMGCAMNSRDSEHLLSELSKLDYKETNDPKTADLILINTCSVREKPERKLFSEIGQ 62
V T+GC +N ++E + + Y+ + +TAD+ +INTC+V ++K I +
Sbjct: 4 VAFHTLGCKVNHYETEAIWQLFKEAGYERRDFEQTADVYVINTCTVTNTGDKKSRQVIRR 63
Query: 63 FAKIKKPNAKIGVCGCTASHMGADILKKAPSVSFVLGARNVSKISQVIHKEKAVEVAIDY 122
+ + P+ I V GC A A+I+ P V V+G ++ K+ I + + I+
Sbjct: 64 AIR-QNPDGVICVTGCYAQTSPAEIMA-IPGVDIVVGTQDREKMLGYIDQYREERQPING 121
Query: 123 DESAYAFEFFEK------KAQIRSLLNISIGCDKKCAYCIVPHTRGKEISIPMDLILKEA 176
+ +E+ + R+ L I GC+ C +CI+P RG S + ++K+A
Sbjct: 122 VSNIMKARVYEELDVPAFTDRTRASLKIQEGCNNFCTFCIIPWARGLLRSRDPEEVIKQA 181
Query: 177 EKLANNGTKELMLLGQNVNNYGARFSSEHAKVDFSDLLDKL-SEIQGIERIRFTSPHPLH 235
++L + G KE++L G + YG + +F+ LL +L + ++G++RIR +S
Sbjct: 182 QQLVDAGYKEIVLTGIHTGGYG----EDMKDYNFAKLLSELDTRVEGVKRIRISSIEASQ 237
Query: 236 MNDGFLERFAKNPKVCKSIHMPLQSGSSAVLKMMRRGYSKEWFLNRVERLKALVPEVGIS 295
+ D +E ++ K+ +H+P+QSGS+ VLK MRR Y+ E+F +R+ +LK +P + ++
Sbjct: 238 ITDEVIEVLDRSDKIVNHLHIPIQSGSNTVLKRMRRKYTMEFFADRLNKLKKALPGLAVT 297
Query: 296 TDIIVGFPNESDKDFEDTMEVLEKVRFDTLYSFIYSPRPFTEAGAWKERVPLEVSSSRLE 355
+D+IVGFP E++++F +T +++ +F L+ F YS R T A +++V V + R+
Sbjct: 298 SDVIVGFPGETEEEFMETYNFIKEHKFSELHVFPYSKRTGTPAARMEDQVDENVKNERVH 357
Query: 356 RLQNRHKEILEEKAKLEVGKTHVVLVE---NRREMDNQIVGFEGRSDTGKFIEVTCKEKR 412
RL ++ +E A + ++ E E +N VG+ T +++V K
Sbjct: 358 RLIALSDQLAKEYASQYENEVLEIIPEEAFKETEEENMFVGY-----TDNYMKVVFKGTE 412
Query: 413 NP-GELVKVEII 423
+ G++VKV+I+
Sbjct: 413 DMIGKIVKVKIL 424
>ref|NP_485265.1| (NC_003272) hypothetical protein [Nostoc sp. PCC 7120]
dbj|BAB73179.1| (AP003585) ORF_ID:alr1222~hypothetical protein [Nostoc sp. PCC
7120]
Length = 440
Score = 189 bits (481), Expect = 4e-47
Identities = 124/427 (29%), Positives = 204/427 (47%), Gaps = 12/427 (2%)
Query: 3 VYIETMGCAMNSRDSEHLLSELSKLDYKETNDPKTADLILINTCSVREKPERKLFSEIGQ 62
+ I +GC N D+EH+L L K Y + + AD +++NTCS E + +
Sbjct: 7 IAISHLGCEKNRIDTEHMLGLLVKAGYGVDTNEELADYVIVNTCSFIESAREE---SVRT 63
Query: 63 FAKIKKPNAKIGVCGCTASHMGADILKKAPSVSFVLGARNVSKISQVIHK-EKAVEVAID 121
++ + N KI + GC A H +L++ P V+G + KI VI + E+ V +
Sbjct: 64 LVELAEANKKIVITGCMAQHFQTQLLEELPEAVAVVGTGDYHKIVSVIERAEQGERVTLV 123
Query: 122 YDESAYAFEF----FEKKAQIRSLLNISIGCDKKCAYCIVPHTRGKEISIPMDLILKEAE 177
E Y + + + + L ++ GCD +CA+CI+PH RG + S ++ I+ EAE
Sbjct: 124 SAEPTYIADETTPRYRTTTEGVAYLRVAEGCDYRCAFCIIPHLRGNQRSRTIESIVAEAE 183
Query: 178 KLANNGTKELMLLGQNVNNYGARFSSEHAKVDFSDLLDKLSEIQGIERIRFTSPHPLHMN 237
+L G +E++L+ Q NYG + K ++LL L +I + IR +P +
Sbjct: 184 QLVAQGVQEIILISQITTNYGLDI---YGKPKLAELLRALGKIN-VPWIRMHYAYPTGLT 239
Query: 238 DGFLERFAKNPKVCKSIHMPLQSGSSAVLKMMRRGYSKEWFLNRVERLKALVPEVGISTD 297
+ + P V + +PLQ S VL+ M R + +ERLK +P + T
Sbjct: 240 PDVIAAIQETPNVLPYLDLPLQHSHSEVLRSMNRPWQGRVNDEIIERLKIAIPGAVLRTT 299
Query: 298 IIVGFPNESDKDFEDTMEVLEKVRFDTLYSFIYSPRPFTEAGAWKERVPLEVSSSRLERL 357
IVGFP E++ FE ++ +++ FD + F +S T A ++P EV R +RL
Sbjct: 300 FIVGFPGETEAQFEHLLQFVQRHEFDHVGVFTFSAEEGTPAYKLPNQLPQEVMDERRDRL 359
Query: 358 QNRHKEILEEKAKLEVGKTHVVLVENRREMDNQIVGFEGRSDTGKFIEVTCKEKRNPGEL 417
+ I K + EVGKT VL+E +++G GR +V + G +
Sbjct: 360 MALQQPISWRKNQQEVGKTVEVLIEQENPESGKLIGRSGRFSPEVDGQVYVDGEAKLGTI 419
Query: 418 VKVEIIS 424
+ V+I S
Sbjct: 420 IPVKIHS 426
>ref|NP_229658.1| (NC_000853) conserved hypothetical protein [Thermotoga maritima]
pir||G72201 conserved hypothetical protein - Thermotoga maritima (strain MSB8)
gb|AAD36924.1|AE001823_6 (AE001823) conserved hypothetical protein [Thermotoga maritima]
Length = 430
Score = 188 bits (477), Expect = 1e-46
Identities = 127/425 (29%), Positives = 208/425 (48%), Gaps = 21/425 (4%)
Query: 1 MKVYIETMGCAMNSRDSEHLLSELSKLDYKETNDPKTADLILINTCSVREKPERKLFSEI 60
M+V I+ +GC N D E L L + ++ D K AD+++++TC+ E +R+ EI
Sbjct: 1 MRVGIKVLGCPKNEADCEVLAGVLREGGHEIVFDVKDADVVVLDTCAFIEDAKRESIDEI 60
Query: 61 GQFAKIKKPNA-KIGVCGCTASHMGADILKKAPSVSFVLGARNVSKISQVIHKEKAVEVA 119
F K K+ V GC ++ K+ P V +G + +I+ I E ++
Sbjct: 61 FSFVDAKDQYGYKLVVKGCLVQRYYEELKKEIPEVDQWIGVADPEEIANAI--ENGTDLV 118
Query: 120 IDYDESAYAF-EFFEKKAQIRSLLNISIGCDKKCAYCIVPHTRGKEISIPMDLILKEAEK 178
D E+ Y + + + + + + + IS GCD+ C +C +P +G S ++ I +E E
Sbjct: 119 PDQPETVYRYRKRIDLEERPYAYVKISDGCDRGCTFCSIPSFKGSLRSRSIEDITREVED 178
Query: 179 LANNGTKELMLLGQNVNNYGARFSSEHAKVDFSDLLDKLSEIQGIERIRFTSPHPLHMND 238
L G KE++L+ Q+ +YG + A DLL +L+ + G IR HP H+ +
Sbjct: 179 LLKEGKKEIILVAQDTTSYGIDLYRKQA---LPDLLRRLNSLNGEFWIRVMYLHPDHLTE 235
Query: 239 GFLERFAKNPKVCKSIHMPLQSGSSAVLKMMRRGYSKEWFLNRVERLKALVPEVGISTDI 298
+ + KV K +P+Q GS +LK+M R S E + ++ P+ + T I
Sbjct: 236 EIISAMLELDKVVKYFDVPVQHGSDKILKLMGRTKSSEELKKMLSSIRERFPDAVLRTSI 295
Query: 299 IVGFPNESDKDFEDTMEVLEKVRFDTLYSFIYSPRPFTEAGAWKERVPLEVSSSRLERLQ 358
IVGFP E+++DFE+ + +E+++FD L +F+YS T A KE+V E++ R E L
Sbjct: 296 IVGFPGETEEDFEELKQFVEEIQFDKLGAFVYSDEEGTVAFNLKEKVDPEMAKRRQEELL 355
Query: 359 NRHKEILEEKAKLEVGKTHVVLVENRR-------------EMDNQIVGFEGRSDTGKFIE 405
EI + VGK LVE + E+D +V G+ G F+E
Sbjct: 356 LLQAEISNSRLDRFVGKKLKFLVEGKEGKFLVGRTWTEAPEVDG-VVFVRGKGKIGDFLE 414
Query: 406 VTCKE 410
V KE
Sbjct: 415 VVIKE 419
>ref|NP_372100.1| (NC_002758) conserved hypothetical protein [Staphylococcus aureus
subsp. aureus Mu50]
ref|NP_374689.1| (NC_002745) conserved hypothetical protein [Staphylococcus aureus
subsp. aureus N315]
dbj|BAB42668.1| (AP003134) conserved hypothetical protein [Staphylococcus aureus
subsp. aureus N315]
dbj|BAB57738.1| (AP003362) conserved hypothetical protein [Staphylococcus aureus
subsp. aureus Mu50]
Length = 448
Score = 186 bits (471), Expect = 6e-46
Identities = 127/441 (28%), Positives = 225/441 (50%), Gaps = 33/441 (7%)
Query: 3 VYIETMGCAMNSRDSEHLLSELSKLDYKETNDPKTADLILINTCSVREKPERKLFSEIGQ 62
V T+GC +N ++E + + +Y+ + AD+ +INTC+V ++K +I +
Sbjct: 4 VAFHTLGCKVNHYETEAIWQLFKEANYERVDFEANADVFVINTCTVTNTGDKKS-RQIIR 62
Query: 63 FAKIKKPNAKIGVCGCTASHMGADILKKAPSVSFVLGARNVSKISQVIHKEKAVEVAIDY 122
A + P+A I V GC A A+I++ P V V+G ++ K+ I + + I+
Sbjct: 63 RAIRQNPDAVICVTGCYAQTSSAEIME-IPGVDVVVGTQDRHKLLGYIDEFRKERQPING 121
Query: 123 DESAYAFEFFEK------KAQIRSLLNISIGCDKKCAYCIVPHTRGKEISIPMDLILKEA 176
+ +E+ + R+ L I GC+ C +CI+P RG S + ++++A
Sbjct: 122 VGNIMKNRKYEELDVPYFTDRTRASLKIQEGCNNFCTFCIIPWARGLMRSRDPEKVVEQA 181
Query: 177 EKLANNGTKELMLLGQNVNNYGARFSSEHAKVDFSDLLDKLSEIQGIERIRFTSPHPLHM 236
+L N+G KE++L G + YG + + LL L I G+ERIR +S +
Sbjct: 182 TQLVNSGYKEIVLTGIHTGGYGQDLKD----YNLAQLLRDLETINGLERIRISSIEASQL 237
Query: 237 NDGFLERFAKNPKVCKSIHMPLQSGSSAVLKMMRRGYSKEWFLNRVERLKALVPEVGIST 296
D ++ ++ KV + +H+PLQSGS VLK MRR Y+ + F R+ +L +P++ +++
Sbjct: 238 TDEVIDVLERSTKVVRHLHIPLQSGSDTVLKRMRRKYTMDRFSERLTKLHKALPDLAVTS 297
Query: 297 DIIVGFPNESDKDFEDTMEVLEKVRFDTLYSFIYSPRPFTEAGAWKERVPLEVSSSRLER 356
D+IVGFP E++ +F++T + + K +F L+ F YSPR T A +++ E+ + R+ +
Sbjct: 298 DVIVGFPGETEAEFQETYDFIVKHKFSELHVFPYSPRIGTPAARMDDQIDEEIKNERVHK 357
Query: 357 LQNRHKEILEEKAKLEVGK----THVVLVENRREMDNQIVG---------FEG-RSDTGK 402
L ++ KL V K V+ E + + + +VG FEG S G+
Sbjct: 358 LITLSNQL----GKLYVSKFDQDVLEVIPEEQGDTEGTLVGYADNYMKVQFEGDESLIGQ 413
Query: 403 FIEVTCKEKR---NPGELVKV 420
++V + N G+ +KV
Sbjct: 414 IVKVKITQANYPLNEGQAIKV 434
>ref|NP_347917.1| (NC_003030) Fe-S oxidoreductases [Clostridium acetobutylicum]
gb|AAK79257.1|AE007641_3 (AE007641) Fe-S oxidoreductases [Clostridium acetobutylicum]
Length = 436
Score = 185 bits (470), Expect = 8e-46
Identities = 124/429 (28%), Positives = 220/429 (50%), Gaps = 16/429 (3%)
Query: 1 MKVYIETMGCAMNSRDSEHLLSELSKLDYKETNDPKTADLILINTCSVREKPERKLFSEI 60
MKV T+GC +NS +SE + + K ++ ++ + AD +INTC+V +RK I
Sbjct: 1 MKVAFITLGCRVNSYESEAMAEKFIKSGWEIVDNDEKADAYVINTCTVTNMGDRKSRQMI 60
Query: 61 GQFAKIKKPNAKIGVCGCTASHMGADILKKAPSVSFVLGARNVSKISQVIHK-----EKA 115
+ K K +A I GC S + + + + V VLG +N I ++K +
Sbjct: 61 SRARKANK-DAVIAAVGCY-SQVEPEKVAEIEGVDIVLGTKNKGDIIHYVNKFIEERNQI 118
Query: 116 VEVAIDYDESAYA-FEFFEKKAQIRSLLNISIGCDKKCAYCIVPHTRGKEISIPMDLILK 174
V V + + + E + + R+ L I GC++ C+YC++P+ RG S + ++
Sbjct: 119 VNVKDVFTDKKFEDLNIDEYQDKTRAFLKIQDGCNRFCSYCLIPYARGGVCSKNPEKVIG 178
Query: 175 EAEKLANNGTKELMLLGQNVNNYGARFSSEHAKVDFSDLLDKLSEIQGIERIRFTSPHPL 234
E ++LA +G KE++L G ++ +YG + + +++K +I GIERIR S P
Sbjct: 179 EIKRLAEHGFKEIILSGIHIASYGDDLKGDWNLIS---IIEKAEQIDGIERIRIGSIEPR 235
Query: 235 HMNDGFLERFAKNPKVCKSIHMPLQSGSSAVLKMMRRGYSKEWFLNRVERLKALVPEVGI 294
++ + + K+C H+ LQSG + L+ M R Y+ E + V +L+ + +V I
Sbjct: 236 FFDEDTISKIKNMKKMCPHFHLSLQSGCTETLERMNRKYTAEEYKEIVYKLRENISDVSI 295
Query: 295 STDIIVGFPNESDKDFEDTMEVLEKVRFDTLYSFIYSPRPFTEAGAWKERVPLEVSSSRL 354
+TD+IVGFP E+D++FE T + L+++ ++ F YSPR T+A A K ++ V R
Sbjct: 296 TTDVIVGFPGETDEEFEKTYDFLKEIELAKMHVFKYSPREGTKAAAMKNQINGNVKDKRS 355
Query: 355 ERLQNRHKEILEEKAKLEVGKTHVVLVENRREMDNQIVGFEGRSDTGKFIEVTCKEKRN- 413
L K ++ + + VL E + E + + +EG T +I+V K +
Sbjct: 356 AELIELDKINEKKFMSKFLDREMDVLFEKKLEENEDL--YEGY--TPNYIKVVVKSSEDI 411
Query: 414 PGELVKVEI 422
+++KV++
Sbjct: 412 SRKILKVKL 420
>ref|NP_646345.1| (NC_003923) conserved hypothetical protein [Staphylococcus aureus
subsp. aureus MW2]
dbj|BAB95393.1| (AP004827) conserved hypothetical protein [Staphylococcus aureus
subsp. aureus MW2]
Length = 448
Score = 185 bits (470), Expect = 8e-46
Identities = 124/437 (28%), Positives = 223/437 (50%), Gaps = 25/437 (5%)
Query: 3 VYIETMGCAMNSRDSEHLLSELSKLDYKETNDPKTADLILINTCSVREKPERKLFSEIGQ 62
V T+GC +N ++E + + +Y+ + AD+ +INTC+V ++K +I +
Sbjct: 4 VAFHTLGCKVNHYETEAIWQLFKEANYERVDFEANADVFVINTCTVTNTGDKKS-RQIIR 62
Query: 63 FAKIKKPNAKIGVCGCTASHMGADILKKAPSVSFVLGARNVSKISQVIHKEKAVEVAIDY 122
A + P+A I V GC A A+I++ P V V+G ++ K+ I + + I+
Sbjct: 63 RAIRQNPDAVICVTGCYAQTSSAEIME-IPGVDVVVGTQDRHKLLGYIDEFRKERQPING 121
Query: 123 DESAYAFEFFEK------KAQIRSLLNISIGCDKKCAYCIVPHTRGKEISIPMDLILKEA 176
+ +E+ + R+ L I GC+ C +CI+P RG S + ++++A
Sbjct: 122 VGNIMKNRKYEELDVPYFTDRTRASLKIQEGCNNFCTFCIIPWARGLMRSRDPEKVVEQA 181
Query: 177 EKLANNGTKELMLLGQNVNNYGARFSSEHAKVDFSDLLDKLSEIQGIERIRFTSPHPLHM 236
+L N+G KE++L G + YG + + LL L I G+ERIR +S +
Sbjct: 182 TQLVNSGYKEIVLTGIHTGGYGQDLKD----YNLAQLLRDLETINGLERIRISSIEASQL 237
Query: 237 NDGFLERFAKNPKVCKSIHMPLQSGSSAVLKMMRRGYSKEWFLNRVERLKALVPEVGIST 296
D ++ ++ KV + +H+PLQSGS VLK MRR Y+ + F R+ +L +P++ +++
Sbjct: 238 TDEVIDVLERSTKVVRHLHIPLQSGSDTVLKRMRRKYTMDRFSERLTKLHKALPDLAVTS 297
Query: 297 DIIVGFPNESDKDFEDTMEVLEKVRFDTLYSFIYSPRPFTEAGAWKERVPLEVSSSRLER 356
D+IVGFP E++ +F++T + + K +F L+ F YSPR T A +++ E+ + R+ +
Sbjct: 298 DVIVGFPGETEAEFQETYDFIVKHKFSELHVFPYSPRIGTPAARMDDQIDEEIKNERVHK 357
Query: 357 LQNRHKEILEEKAKLEVGKTHVVLVENRREMDNQIVG---------FEG-RSDTGKFIEV 406
L ++ + A V+ E + + + +VG FEG S G+ ++V
Sbjct: 358 LITLSNQLGKLYASKFDQDVLEVIPEEQGDTEGTLVGYADNYMKVQFEGDESLIGQIVKV 417
Query: 407 TCKEKR---NPGELVKV 420
+ N G+ +KV
Sbjct: 418 KITQANYPLNEGQAIKV 434
>gb|AAD02057.1| (AF036764) unknown [Clostridium acetobutylicum]
Length = 386
Score = 184 bits (466), Expect = 2e-45
Identities = 111/363 (30%), Positives = 191/363 (52%), Gaps = 11/363 (3%)
Query: 1 MKVYIETMGCAMNSRDSEHLLSELSKLDYKETNDPKTADLILINTCSVREKPERKLFSEI 60
MKV T+GC +NS +SE + + K ++ ++ + AD +INTC+V +RK I
Sbjct: 1 MKVAFITLGCRVNSYESEAMAEKFIKSGWEIVDNDEKADAYVINTCTVTNMGDRKSRQMI 60
Query: 61 GQFAKIKKPNAKIGVCGCTASHMGADILKKAPSVSFVLGARNVSKISQVIHK-----EKA 115
+ K K +A I GC S + + + + V VLG +N I ++K +
Sbjct: 61 SRARKANK-DAVIAAVGCY-SQVEPEKVAEIEGVDIVLGTKNKGDIIHYVNKFIEERNQI 118
Query: 116 VEVAIDYDESAYA-FEFFEKKAQIRSLLNISIGCDKKCAYCIVPHTRGKEISIPMDLILK 174
V V + + + E + + R+ L I GC++ C+YC++P+ RG S + ++
Sbjct: 119 VNVKDVFTDKKFEDLNIDEYQDKTRAFLKIQDGCNRFCSYCLIPYARGGVCSKNPEKVIG 178
Query: 175 EAEKLANNGTKELMLLGQNVNNYGARFSSEHAKVDFSDLLDKLSEIQGIERIRFTSPHPL 234
E ++LA +G KE++L G ++ +YG + + +++K +I GIERIR S P
Sbjct: 179 EIKRLAEHGFKEIILSGIHIASYGDDLKGDWNLIS---IIEKAEQIDGIERIRIGSIEPR 235
Query: 235 HMNDGFLERFAKNPKVCKSIHMPLQSGSSAVLKMMRRGYSKEWFLNRVERLKALVPEVGI 294
++ + + K+C H+ LQSG + L+ M R Y+ E + V +L+ + +V I
Sbjct: 236 FFDEDTISKIKNMKKMCPHFHLSLQSGCTETLERMNRKYTAEEYKEIVYKLRENISDVSI 295
Query: 295 STDIIVGFPNESDKDFEDTMEVLEKVRFDTLYSFIYSPRPFTEAGAWKERVPLEVSSSRL 354
+TD+IVGFP E+D++FE T + L+++ ++ F YSPR T+A A K ++ V R
Sbjct: 296 TTDVIVGFPGETDEEFEKTYDFLKEIELAKMHVFKYSPREGTKAAAMKNQINGNVKDKRS 355
Query: 355 ERL 357
L
Sbjct: 356 AEL 358
>ref|NP_343738.1| (NC_002754) Conserved hypothetical protein [Sulfolobus
solfataricus]
gb|AAK42528.1| (AE006839) Conserved hypothetical protein [Sulfolobus solfataricus]
Length = 421
Score = 183 bits (464), Expect = 4e-45
Identities = 116/382 (30%), Positives = 206/382 (53%), Gaps = 18/382 (4%)
Query: 3 VYIETMGCAMNSRDSEHLLSELSKLDYKETNDPKTADLILINTCSVREKPERKLFSEIGQ 62
+Y+ET GCA+N D+ +++ L Y +P+ AD+I++NTC+VR + E ++ I +
Sbjct: 4 IYVETYGCALNRADTYVMMTLLKSEGYNFVENPENADIIILNTCAVRLETEERMKQRIKE 63
Query: 63 FAKIKKPNAKIGVCGCTASHMGADILKKAPSVSFVLGARNVSKISQVIHKEKAVEVAIDY 122
+ K K+ V GC +S A +L AP+ S + G ++V +I ++ E+ ++ I+
Sbjct: 64 LNTLSK---KLVVAGCMSSAEPATVLSIAPNASLI-GPQSVERIVDIVKSEER-KIVIEG 118
Query: 123 DESAYAFEFFEKKAQIRSLLNISIGCDKKCAYCIVPHTRGKEISIPMDLILKEAEKLANN 182
D + F+ K I + ++ GC C++CI R K S P+ I+ A +
Sbjct: 119 DRALITPRTFDGKIAI---IPVADGCAGNCSFCITKLARRKLRSYPLREIVNAARDAIQS 175
Query: 183 GTKELMLLGQNVNNYGARFSSEHAKVDFSDLLDKLSEIQGIERIRF---TSPHPLHMNDG 239
G +E+ L GQ+ YG + D+++K+++I G IR T + + D
Sbjct: 176 GAREIELTGQDTAAYGLDLGGS---ISLVDVVNKVADIDGDFMIRIGMMTPEQAMRIMDD 232
Query: 240 FLERFAKNPKVCKSIHMPLQSGSSAVLKMMRRGYSKEWFLNRVERLKALVPEVGISTDII 299
+E +NPKV K IH+P+QSG VLK+M R Y+ + + + ++ +P V I+TDII
Sbjct: 233 LIEAI-RNPKVYKFIHLPVQSGDDRVLKLMNRKYTVDEYKELISEIRHKIPFVNITTDII 291
Query: 300 VGFPNESDKDFEDTMEVLEKVRFDTLYSFIYSPRPFTEAGAWKERVPLEVSSSRLERLQN 359
VG P E ++ F +T+ +++++RF+ ++ +YS RP T + + + VP + R++ + N
Sbjct: 292 VGHPGEDEEAFNNTLLLMKELRFERIHLAMYSIRPNTRSASMPQ-VPDSIKKKRIQ-IAN 349
Query: 360 RHKEILEEKAKLE-VGKTHVVL 380
+ E L L+ VG T V+
Sbjct: 350 KLYEDLALSIHLDYVGSTSRVI 371
>ref|NP_442485.1| (NC_000911) hypothetical protein [Synechocystis sp. PCC 6803]
sp|Q55803|Y082_SYNY3 Hypothetical protein slr0082
pir||S76611 hypothetical protein slr0082 - Synechocystis sp. (strain PCC 6803)
dbj|BAA10555.1| (D64004) ORF_ID:slr0082~hypothetical protein [Synechocystis sp. PCC
6803]
Length = 443
Score = 183 bits (464), Expect = 4e-45
Identities = 127/425 (29%), Positives = 207/425 (47%), Gaps = 12/425 (2%)
Query: 3 VYIETMGCAMNSRDSEHLLSELSKLDYKETNDPKTADLILINTCSVREKPERKLFSEIGQ 62
+ I +GC N DSEH+L L + Y+ + + AD +++NTCS + ++ + +
Sbjct: 7 IAINHLGCEKNRIDSEHMLGLLVEAGYQVDANEELADYVIVNTCSFIQDARQESVRTLVE 66
Query: 63 FAKIKKPNAKIGVCGCTASHMGADILKKAPSVSFVLGARNVSKISQVIHK-EKAVEV-AI 120
A+ KK KI + GC A H +L++ P V+G + I +I + E+ V AI
Sbjct: 67 LAEAKK---KIVISGCLAQHFQEQLLEEIPEAVAVVGTGDYQNIVDIIRRTEQGQRVKAI 123
Query: 121 DYDESAYAFEF---FEKKAQIRSLLNISIGCDKKCAYCIVPHTRGKEISIPMDLILKEAE 177
+ S A E + + + L ++ GCD +CA+CI+P RGK+ S P++ I+ EAE
Sbjct: 124 SPNPSFIADENLPRYRTTNEAIAYLRVAEGCDYRCAFCIIPQLRGKQRSRPIESIVAEAE 183
Query: 178 KLANNGTKELMLLGQNVNNYGARFSSEHAKVDFSDLLDKLSEIQGIERIRFTSPHPLHMN 237
+LA+ G KEL+L+ Q NYG E ++LL L ++ I IR +P +
Sbjct: 184 QLASQGVKELILISQITTNYGLDLYGEPK---LAELLQALGKVD-IPWIRIHYAYPTGLT 239
Query: 238 DGFLERFAKNPKVCKSIHMPLQSGSSAVLKMMRRGYSKEWFLNRVERLKALVPEVGISTD 297
+E P V + +PLQ +L+ M R + + + + RLK +P+ + T
Sbjct: 240 PKVIEAIRDTPNVLPYLDLPLQHSHPDILRAMNRPWQGQVNDDIITRLKTALPDAVLRTT 299
Query: 298 IIVGFPNESDKDFEDTMEVLEKVRFDTLYSFIYSPRPFTEAGAWKERVPLEVSSSRLERL 357
IVGFP E+++ F ++ +++ +FD + F +SP T A VP EV R +RL
Sbjct: 300 FIVGFPGETEEHFGHLLDFVQRHQFDHVGVFTFSPEEGTAAFDLPNAVPEEVMGDRRDRL 359
Query: 358 QNRHKEILEEKAKLEVGKTHVVLVENRREMDNQIVGFEGRSDTGKFIEVTCKEKRNPGEL 417
+ I +K +G+T VL+E + +G R V K N E+
Sbjct: 360 MALQQPISAQKNAACLGQTLDVLIEQENPSTGEFIGRSTRFAPEVDGLVYVKGNANLNEI 419
Query: 418 VKVEI 422
V V I
Sbjct: 420 VPVVI 424
>ref|NP_213577.1| (NC_000918) hypothetical protein [Aquifex aeolicus]
sp|O67016|Y849_AQUAE Hypothetical protein AQ_849
pir||E70373 conserved hypothetical protein aq_849 - Aquifex aeolicus
gb|AAC06982.1| (AE000710) hypothetical protein [Aquifex aeolicus]
Length = 432
Score = 182 bits (462), Expect = 7e-45
Identities = 119/387 (30%), Positives = 197/387 (50%), Gaps = 19/387 (4%)
Query: 1 MKVYIETMGCAMNSRDSEHLLSELSKLDYKETNDPKTADLILINTCSVREKPERKLFSEI 60
MK+ + ++GCA N DSE LL +L + T +P+ AD+I++NTC E + + I
Sbjct: 1 MKIGVVSLGCAKNLVDSEILLGKLKGAGVELTPNPEEADVIIVNTCGFIEPAKLESIETI 60
Query: 61 GQFAKIKKPNAKIGVCGCTASHMGADILKKAPSVSFVLGARNVSKISQVIH-KEKAVEVA 119
+FA+ K ++ V GC ++ K+ P V G + ++I + KEK
Sbjct: 61 LEFAESGK---EVIVMGCLVERYKEELEKEIPEVKAYFGTESWNEILNYLGLKEKKEIKR 117
Query: 120 IDYDESAYAFEFFEKKAQIRSLLNISIGCDKKCAYCIVPHTRGKEISIPMDLILKEAEKL 179
I +YA+ L I+ GC++ C++C +P RG+ S ++ I+ EA+ L
Sbjct: 118 ILSTPRSYAY------------LKIAEGCNRLCSFCAIPKIRGRHRSRKIEEIVDEAKFL 165
Query: 180 ANNGTKELMLLGQNVNNYGARFSSEHAKVDFSDLLDKLSEIQGIERIRFTSPHPLHMNDG 239
A+ G KE+ ++ Q+ YG E+ V+ LL+ L +++GI+ IR +P +++
Sbjct: 166 ADQGVKEICVVSQDTTYYGKDLYKEYKLVE---LLEGLEKVEGIKWIRLLYLYPTEVHED 222
Query: 240 FLERFAKNPKVCKSIHMPLQSGSSAVLKMMRRGYSKEWFLNRVERLKALVPEVGISTDII 299
++ A + KV +PLQ S VLK MRRGY ++ N +E ++ + T I
Sbjct: 223 LIDYVANSEKVLPYFDVPLQHVSDRVLKDMRRGYDGKFVRNLIENIRKKIENAVFRTTFI 282
Query: 300 VGFPNESDKDFEDTMEVLEKVRFDTLYSFIYSPRPFTEAGAWKERVPLEVSSSRLERLQN 359
VGFP ES++DF++ + +E+ F L F YSP T A + +P EV R E L
Sbjct: 283 VGFPTESEEDFKELKKFVEEGHFHWLGVFTYSPEEGTHAYPLGDPIPREVKEERREELMA 342
Query: 360 RHKEILEEKAKLEVGKTHVVLVENRRE 386
+ I +K + +GK VL++ E
Sbjct: 343 IQRGITRKKNEEFLGKEIEVLIDGYEE 369
>ref|NP_247862.1| (NC_000909) conserved hypothetical protein [Methanococcus
jannaschii] [Methanocaldococcus jannaschii]
sp|Q58277|Y867_METJA Hypothetical protein MJ0867
pir||C64408 hypothetical protein HI0019 homolog - Methanococcus jannaschii
gb|AAB98872.1| (U67530) conserved hypothetical protein [Methanococcus jannaschii]
[Methanocaldococcus jannaschii]
Length = 427
Score = 180 bits (456), Expect = 3e-44
Identities = 130/431 (30%), Positives = 219/431 (50%), Gaps = 29/431 (6%)
Query: 1 MKVYIETMGCAMNSRDSEHLLSELSKLDYKETNDPKTADLILINTCSVREKPERKLFSEI 60
M+VY+E GC +N+ D+E + + L K ++ N+ + AD+ +INTC VR + E ++ I
Sbjct: 12 MRVYVEGYGCVLNTADTEIIKNSLKKHGFEVVNNLEEADIAIINTCVVRLETENRMIYRI 71
Query: 61 GQFAKIKKPNAKIGVCGCTASHMGADILKKAPSVSFVLGARNVSKISQVIHKEKAVEVAI 120
+ + K ++ V GC LK + R K +++ +
Sbjct: 72 NELKNLGK---EVVVAGCLPK-----ALKNKVKGFLHIYPREAHKAGEILKNYVEKHYRM 123
Query: 121 DYDESAYAFEFFEK----KAQIRSLLNISIGCDKKCAYCIVPHTRGKEISIPMDLILKEA 176
Y E ++K K + + L I GC C+YCIV RG IS P + I+ +A
Sbjct: 124 PYIEEDINKTLYKKLDYLKPSLITPLPICEGCIGNCSYCIVKIARGGLISYPREKIVNKA 183
Query: 177 EKLANNGTKELMLLGQNVNNYGARFSSEHAKVDFSDLLDKLSEIQGIERIRFTSPHPLHM 236
++L N G K L++ Q+ YG + ++LL++L++I+G +R H +
Sbjct: 184 KELINKGAKCLLITAQDTACYGFDIGD-----NLANLLNELTQIKGEFIMRVGMMHAKNA 238
Query: 237 N---DGFLERFAKNPKVCKSIHMPLQSGSSAVLKMMRRGYSKEWFLNRVERLKALVPEVG 293
D +E + +N KV K +H+PLQSG +LK M+RGY+ + F + V + + +
Sbjct: 239 ELILDELIEVY-QNEKVGKFLHLPLQSGDDEILKRMKRGYTVDEFKDIVNEFRRKIKNLC 297
Query: 294 ISTDIIVGFPNESDKDFEDTMEVLEKVRFDTLYSFIYSPRPFTEAGAWKERVPLEVSSSR 353
+TDIIVGFP E+++ F++T+EVL +++ D ++ YS R TEA K+ + ++ R
Sbjct: 298 FTTDIIVGFPGETEEQFQNTLEVLRELKPDYIHGAKYSQRKGTEAAKMKQ-IDTKIRKRR 356
Query: 354 LERLQNRHKEILEEKAKLEVGKTHVVLV--ENRREMDN-QIVGFEGRSDTGKFIEVTCKE 410
E L +E+ K +GK VLV E + DN ++V FEG + G+F +V +
Sbjct: 357 SEILDKLRRELSYLNNKKYIGKAMKVLVLDEGKGYTDNFKVVKFEG-GEVGEFRKVKITD 415
Query: 411 KRN---PGELV 418
+ GEL+
Sbjct: 416 AKTFGLKGELI 426
>gb|AAF23796.1|AF213822_11 (AF213822) hypothetical protein [Zymomonas mobilis]
Length = 443
Score = 174 bits (441), Expect = 2e-42
Identities = 106/388 (27%), Positives = 200/388 (51%), Gaps = 16/388 (4%)
Query: 2 KVYIETMGCAMNSRDSEHLLSELSKLDYKETNDPKTADLILINTCSVREKPERKLFSEIG 61
K+ + ++GC DSE +L++L Y ++ AD++L+NTC + + + IG
Sbjct: 10 KIGMVSLGCPKALVDSERILTKLRSEGYNLSSQYDEADVVLVNTCGFIDSAKEESLDAIG 69
Query: 62 QFAKIKKPNAKIGVCGCTASHMGADILKKAPSVSFVLGARNVSKISQVIHKEKAVEVAID 121
+ N ++ V GC + I ++ P + + GA+ ++ +H +E +
Sbjct: 70 E---AMAENGRVIVTGCLGNEANR-IRERFPDILAITGAQQYEEVVSAVHDAAPIEASPY 125
Query: 122 YDESAYAFEFFEKKAQIRSLLNISIGCDKKCAYCIVPHTRGKEISIPMDLILKEAEKLAN 181
D + + + S L IS GC+ +C++CI+P RG +S D IL+EAEKL
Sbjct: 126 VD--LVPEQGLKLTPRHYSYLKISEGCNHRCSFCIIPSLRGDLVSRRADAILREAEKLVA 183
Query: 182 NGTKELMLLGQNVNNYGA-------RFSSEHAKVDFSDLLDKLSEIQGIERIRFTSPHPL 234
GTKEL+++GQ+ + YG R+ K D +DL L E+ R+ + P+P
Sbjct: 184 AGTKELLVIGQDSSAYGVDLRHQEYRWKDRMVKADLTDLARGLGELGAWVRLHYVYPYP- 242
Query: 235 HMNDGFLERFAKNPKVCKSIHMPLQSGSSAVLKMMRRGYSKEWFLNRVERLKALVPEVGI 294
H+ D + A+ + + +P Q S +VLK M+R ++ L+R+ + + +VP++ +
Sbjct: 243 HV-DNLIPLMAEG-LILPYLDIPFQHASPSVLKRMKRPANEVKILDRLTKWREIVPDIAL 300
Query: 295 STDIIVGFPNESDKDFEDTMEVLEKVRFDTLYSFIYSPRPFTEAGAWKERVPLEVSSSRL 354
+ +VGFP E+++DF+ ++ L++ + D + +F + A A+ VP EV + R
Sbjct: 301 RSSFVVGFPGETEQDFQYLLDWLDEAQLDRVGAFRFEAVEGAAANAFDGAVPEEVKNERY 360
Query: 355 ERLQNRHKEILEEKAKLEVGKTHVVLVE 382
+RL + +I E K + ++G+ +++
Sbjct: 361 QRLMEKAAQISEAKLQAKIGRDIATIID 388
>ref|NP_376401.1| (NC_003106) 418aa long conserved hypothetical protein [Sulfolobus
tokodaii]
dbj|BAB65510.1| (AP000982) 418aa long conserved hypothetical protein [Sulfolobus
tokodaii]
Length = 418
Score = 173 bits (439), Expect = 3e-42
Identities = 126/429 (29%), Positives = 213/429 (49%), Gaps = 24/429 (5%)
Query: 1 MKVYIETMGCAMNSRDSEHLLSELSKLDYKETNDPKTADLILINTCSVREKPERKLFSEI 60
MKVYIET GCA+N DS +++ L + + AD+I++NTC+VR + E ++ I
Sbjct: 1 MKVYIETYGCALNKGDSYIMMTLLKDRGHDIVDSYNQADVIVLNTCAVRLETEERMKQRI 60
Query: 61 GQFAKIKKPNAKIGVCGCTASHMGADILKKAPSVSFVLGARNVSKISQVIHKEKAVEVAI 120
+ KI K K+ + GC S A ++ AP S V GA+++ KI + + K + +
Sbjct: 61 KELKKIGK---KLIIAGCLVSSQPALVMSLAPESSIV-GAQSIDKIVEAVESNKR-GIFL 115
Query: 121 DYDESAYAFEFFEKKAQIRSLLNISIGCDKKCAYCIVPHTRGKEISIPMDLILKEAEKLA 180
+ + FE K S++ I+ GC C +CI R K S P I+ ++
Sbjct: 116 EESKELVTPRIFEGKI---SIIPIADGCAGDCNFCITKLARKKLRSYPPRNIVNAVKEAV 172
Query: 181 NNGTKELMLLGQNVNNYGARFSSEHAKVDFSDLLDKLSEIQGIERIRFTSPHP---LHMN 237
G E+ L Q+ YG + + +LL ++ EI+G IR P
Sbjct: 173 QKGAVEIELTAQDTAAYGLDIN-----YNLVELLKEILEIEGNYMIRIGMMTPELAFKQI 227
Query: 238 DGFLERFAKNPKVCKSIHMPLQSGSSAVLKMMRRGYSKEWFLNRVERLKALVPEVGISTD 297
D LE K+ +V K +H+P+QSG VLK+M R Y+ + + V+ ++ +P V I+TD
Sbjct: 228 DEILE-IIKDKRVYKFLHLPVQSGDDRVLKLMNRKYTVDEYRELVKEIRDKIPIVNITTD 286
Query: 298 IIVGFPNESDKDFEDTMEVLEKVRFDTLYSFIYSPRPFTEAGAWKERVPLEVSSSRLERL 357
II+G P E D+ F++T+ ++++++F+ ++ +YS RP T + + + VP + R++
Sbjct: 287 IIIGHPGEDDEAFQNTINLIKEIKFERIHLAMYSIRPNTRSASMPQ-VPDSIKKERMKIA 345
Query: 358 QNRHKEILEEKAKLEVGKTHVVLVENRREMDNQIVGFEGRSDTGKFIEVTCKEKRNPGEL 417
++E+ +G +VL + I GR T +I V K+ GE
Sbjct: 346 NEVYEEVAYSVHSEYLGSNALVLTTELGRKGSII----GR--TINYIPVVIKDYDKLGEW 399
Query: 418 VKVEIISHS 426
+ V+I S
Sbjct: 400 INVKITEAS 408
>ref|NP_637912.1| (NC_003902) conserved hypothetical protein [Xanthomonas campestris
pv. campestris str. ATCC 33913]
gb|AAM41836.1| (AE012368) conserved hypothetical protein [Xanthomonas campestris
pv. campestris str. ATCC 33913]
Length = 457
Score = 171 bits (434), Expect = 1e-41
Identities = 126/441 (28%), Positives = 211/441 (47%), Gaps = 40/441 (9%)
Query: 2 KVYIETMGCAMNSRDSEHLLSELSKLDYKETNDPKTADLILINTCSVREKPERKLFSEIG 61
KV ++GC DSE +L++L Y AD++++NTC + + IG
Sbjct: 7 KVGFVSLGCPKALVDSERILTQLRVEGYDIVPSYDAADVVVVNTCGFIDSAVTESLDAIG 66
Query: 62 QFAKIKKPNAKIGVCGCTASHMGADILKKAPSVSFVLGARNVSKISQVIHK------EKA 115
+ N K+ V GC I + P V V G ++ + + +H +
Sbjct: 67 E---AMNANGKVIVTGCLGKRP-EQIREAYPQVLAVSGPQDYQSVMEAVHAALPPRHDPF 122
Query: 116 VEVAIDYDESAYAFEFFEKKAQIRSLLNISIGCDKKCAYCIVPHTRGKEISIPMDLILKE 175
V++ DY + + L IS GC+ +C++CI+P RG S P+D +L+E
Sbjct: 123 VDLVPDYGIKLTPRHY--------AYLKISEGCNHRCSFCIIPSMRGDLASRPVDEVLRE 174
Query: 176 AEKLANNGTKELMLLGQNVNNYGARFSSEHAKVDFSD---------LLDKLSEIQGIERI 226
AE+L G KEL+++ Q+ + YG ++A+ + D L + LSE+ R+
Sbjct: 175 AERLVRGGVKELLVVSQDTSAYGVDL--KYAERPWRDRMYQTRMKALCEGLSELGVWTRL 232
Query: 227 RFTSPHPLHMNDGFLERFAKNPKVCKSIHMPLQSGSSAVLKMMRRGYSKEWFLNRVERLK 286
+ P+P H++D + K+ + +P Q S +LK+M+R + E L RV+R K
Sbjct: 233 HYVYPYP-HVDD--VIPLMAEGKLLPYLDIPFQHASPRILKLMKRPGAVEKTLERVQRWK 289
Query: 287 ALVPEVGISTDIIVGFPNESDKDFEDTMEVLEKVRFDTLYSFIYSPRPFTEAGAWKERVP 346
A+ PE+ + + IVGFP E+D +FE +E L++ + D + +F YSP A A + VP
Sbjct: 290 AMCPEITVRSTFIVGFPGETDAEFEALLEFLDQAQLDRVGAFAYSPVEGASANALPDPVP 349
Query: 347 LEVSSSRLERLQNRHKEILEEKAKLEVGKTHVVLVENRREMDNQIVGFEGRSDTGKF--- 403
E+ RL R R EI + + ++G LV+ +++ I R+D +
Sbjct: 350 EELKQERLARFMARQAEISAARLEAKIGSVQQCLVD---LIEDDIAVARSRADAPEIDGL 406
Query: 404 --IEVTCKEKRNPGELVKVEI 422
I+ + K G+LV VEI
Sbjct: 407 VHIQNGGELKLKVGDLVDVEI 427
>ref|NP_275963.1| (NC_000916) conserved protein [Methanothermobacter
thermautotrophicus] [Methanothermobacter
thermautotrophicus str. Delta H]
sp|O26914|Y826_METTH Hypothetical protein MTH826
pir||B69210 conserved hypothetical protein MTH826 - Methanobacterium
thermoautotrophicum (strain Delta H)
gb|AAB85324.1| (AE000860) conserved protein [Methanothermobacter
thermautotrophicus str. Delta H]
Length = 424
Score = 171 bits (432), Expect = 2e-41
Identities = 132/430 (30%), Positives = 208/430 (47%), Gaps = 28/430 (6%)
Query: 1 MKVYIETMGCAMNSRDSEHLLSELSKLDYKETNDPKTADLILINTCSVREKPERKLFSEI 60
++VYIET GC N DSE +++ + + + AD+I+INTC V+ E K+ + I
Sbjct: 4 IRVYIETFGCTFNQADSE-IMAGVLREEGAVLTGIDDADVIIINTCYVKHPTEHKVINRI 62
Query: 61 GQFAKIKKPNAKIGVCGCTASHMGADILKKAPSVSFVLGARNVSKISQVIHKEKAVEVAI 120
+ + P + V GC + + + S+ LG + + Q + +A +
Sbjct: 63 KKIQETY-PEKGLVVAGCMVEIDPSKLEAISGDASW-LGPHQLRRAPQAV---RAASNGL 117
Query: 121 DYDESAYAFEFFEKKAQIRS-----LLNISIGCDKKCAYCIVPHTRGKEISIPMDLILKE 175
+ + + K ++RS ++ I GC+ C+YC RG+ S P DLI+ E
Sbjct: 118 VERITGFTSDVKVKVPRVRSNPLIHIIPICEGCNGSCSYCCTRFARGRIQSYPSDLIISE 177
Query: 176 AEKLANNGTKELMLLGQNVNNYGARFSSEHAKVDFSDLLDKLSEIQGIERIRFTSPHP-- 233
A + +G +E+ L Q+ YG + SD++ +S I G RIR HP
Sbjct: 178 AREAVASGCREIQLTAQDTAAYGVDTGEK-----LSDIIKGISGIPGNFRIRVGMMHPAS 232
Query: 234 -LHMNDGFLERFAKNPKVCKSIHMPLQSGSSAVLKMMRRGYSKEWFLNRVERLKALVPEV 292
L DG +E F K+ KV +H+P+QSGS +VL M RG++ + F VER ++ +P++
Sbjct: 233 VLRDLDGLVEAF-KSEKVYSFLHLPVQSGSDSVLADMERGHTVDEFRMIVERFRSEIPDI 291
Query: 293 GISTDIIVGFPNESDKDFEDTMEVLEKVRFDTLYSFIYSPRPFTEAGAWKERVPLEVSSS 352
I+TDIIVG+P E +DF DT +LE+V+ ++ Y RP + + E +
Sbjct: 292 SIATDIIVGYPTEEREDFMDTCSLLEEVKPSFIHLSKYRHRPRARSSSLDE-IDFRELRR 350
Query: 353 RLERLQNRHKEILEEKAKLEVGKTHVVLVENRREMDNQIVGFEGRSDTGKFIEVTCKEKR 412
R L+ I EE+ + VG +LV R GF GR TG +I V E
Sbjct: 351 RSRALEELKMRITEEENRRLVGSFQEILVVERGRKG----GFIGR--TGSYIPVV-TETG 403
Query: 413 NPGELVKVEI 422
PG +V I
Sbjct: 404 EPGSFRRVRI 413
>ref|NP_643044.1| (NC_003919) conserved hypothetical protein [Xanthomonas axonopodis
pv. citri str. 306]
gb|AAM37580.1| (AE011913) conserved hypothetical protein [Xanthomonas axonopodis
pv. citri str. 306]
Length = 457
Score = 169 bits (428), Expect = 6e-41
Identities = 113/396 (28%), Positives = 194/396 (48%), Gaps = 32/396 (8%)
Query: 2 KVYIETMGCAMNSRDSEHLLSELSKLDYKETNDPKTADLILINTCSVREKPERKLFSEIG 61
KV ++GC DSE +L++L Y AD++++NTC + + IG
Sbjct: 7 KVGFVSLGCPKALVDSERILTQLRVEGYDIVPSYDAADVVVVNTCGFIDSAVTESLDAIG 66
Query: 62 QFAKIKKPNAKIGVCGCTASHMGADILKKAPSVSFVLGARNVSKISQVIHK------EKA 115
+ N K+ V GC I + P V V G ++ + + +H +
Sbjct: 67 E---AMNANGKVIVTGCLGKRP-EQIREAYPQVLAVSGPQDYQSVMEAVHAALPPRHDPF 122
Query: 116 VEVAIDYDESAYAFEFFEKKAQIRSLLNISIGCDKKCAYCIVPHTRGKEISIPMDLILKE 175
V++ DY + + L IS GC+ +C++CI+P RG +S P+D +L+E
Sbjct: 123 VDLVPDYGIKLTPRHY--------AYLKISEGCNHRCSFCIIPSMRGDLVSRPVDEVLRE 174
Query: 176 AEKLANNGTKELMLLGQNVNNYGARFSSEHAKVDFSD---------LLDKLSEIQGIERI 226
AE+L G KEL+++ Q+ + YG ++A+ + D L + LSE+ R+
Sbjct: 175 AERLVRGGVKELLVVSQDTSAYGVDL--KYAERPWRDRLYQTRMKALCEGLSELGVWTRL 232
Query: 227 RFTSPHPLHMNDGFLERFAKNPKVCKSIHMPLQSGSSAVLKMMRRGYSKEWFLNRVERLK 286
+ P+P H++D + K+ + +P Q S +LK+M+R + E L RV+R K
Sbjct: 233 HYVYPYP-HVDD--VIGLMAEGKLLPYLDIPFQHASPRILKLMKRPGAVEKTLERVQRWK 289
Query: 287 ALVPEVGISTDIIVGFPNESDKDFEDTMEVLEKVRFDTLYSFIYSPRPFTEAGAWKERVP 346
A+ PE+ + + IVGFP E+D +FE ++ L++ + D + +F YSP A A ++VP
Sbjct: 290 AMCPEITVRSTFIVGFPGETDAEFESLLDFLDQAQLDRVGAFAYSPVDGASANALPDQVP 349
Query: 347 LEVSSSRLERLQNRHKEILEEKAKLEVGKTHVVLVE 382
EV RL R + +I + + ++G LV+
Sbjct: 350 EEVKQERLARFMAKQAQISALRLESKIGSVQQCLVD 385
>sp|Q49573|Y16R_MYCIO Hypothetical 51.3 kDa protein in 16S RNA 5'region
Length = 438
Score = 167 bits (422), Expect = 3e-40
Identities = 115/398 (28%), Positives = 202/398 (49%), Gaps = 17/398 (4%)
Query: 5 IETMGCAMNSRDSEHLLSELSKLDYKETNDPKTADLILINTCSVREKPERKLFSEIGQFA 64
I T+GC +N +S + ++L E AD+ +INTC+V K + K I + A
Sbjct: 12 IHTLGCKVNLFESNSIKNDLIMNGLVEVPFDSKADVYIINTCTVTNKADAKSRLYIKR-A 70
Query: 65 KIKKPNAKIGVCGCTASHMGADILKKAPSVSFVLGARNVSKISQVIHKEKAVEVAIDYDE 124
++ +A I V GC S + D++ K +S +G + + + +I++ I E
Sbjct: 71 HVQNKDAIIIVAGCM-SQVNKDLMDKL-KISIQIGNKYKNSVFDLINEYLKKRERIYRVE 128
Query: 125 SAYAFEFFEKKAQ-------IRSLLNISIGCDKKCAYCIVPHTRGKEISIPMDLILKEAE 177
+ A + FE+ Q R+ + I GC+ C+YCI+P +RG++ S M+ IL++ +
Sbjct: 129 NILAEKKFEQTTQDFIFLENTRAFIKIQDGCNFMCSYCIIPFSRGRQRSQKMESILEKIK 188
Query: 178 KLANNGTKELMLLGQNVNNYGARFSSEHAKVDFSDLLDKLSEIQGIERIRFTSPHPLHMN 237
L + KE++L G N Y + F DLL+ ++++ G R+R +S P +N
Sbjct: 189 TLVSKXFKEIVLTGVNTAGY-----LDENNNTFFDLLNNINKLDGDFRVRISSLEPFQIN 243
Query: 238 DGFLERFAKNPK-VCKSIHMPLQSGSSAVLKMMRRGYSKEWFLNRVERLKALVPEVGIST 296
D ++ N K C+ H+ LQSGS VLK M R Y+ + F ++++ P +T
Sbjct: 244 DEIIDLVTSNKKRFCQHWHICLQSGSDDVLKKMNRKYTTDEFYKLMQKILNKSPLTNFTT 303
Query: 297 DIIVGFPNESDKDFEDTMEVLEKVRFDTLYSFIYSPRPFTEAGAWKERVPLEVSSSRLER 356
D IVGFP E+D+D + +++ L K++ ++ F YS R T + +K+ + R++
Sbjct: 304 DYIVGFPTETDEDQKKSIDFLNKIKLYDMHIFPYSKRNNTRSSHYKD-INDSTKKDRVKE 362
Query: 357 LQNRHKEILEEKAKLEVGKTHVVLVENRREMDNQIVGF 394
+ + +E K +GKT VL E ++E + G+
Sbjct: 363 ITKLNYLNKKENLKKYIGKTCEVLFEKKKEDEKMWSGY 400
>ref|NP_232248.1| (NC_002505) conserved hypothetical protein [Vibrio cholerae]
pir||H82054 conserved hypothetical protein VC2620 [imported] - Vibrio cholerae
(group O1 strain N16961)
gb|AAF95761.1| (AE004328) conserved hypothetical protein [Vibrio cholerae]
Length = 470
Score = 166 bits (421), Expect = 4e-40
Identities = 123/439 (28%), Positives = 221/439 (50%), Gaps = 30/439 (6%)
Query: 2 KVYIETMGCAMNSRDSEHLLSELSKLDYKETNDPKTADLILINTCSVREKPERKLFSEIG 61
K+ ++GC N DSE +L++L Y+ N +D++++NTC + ++ IG
Sbjct: 34 KIGFVSLGCPKNLVDSERILTQLRTEGYEIVNSYHDSDVVIVNTCGFIDSAVQESLDTIG 93
Query: 62 QFAKIKKPNAKIGVCGCTASHMGADILKKAPSVSFVLGARNVSKISQVIHKEKAVEVAID 121
+ K N K+ V GC + +I + P+V + G + + +H + A + A +
Sbjct: 94 EALK---ENGKVIVTGCLGARED-EIRQVHPNVLGITGPHAYQNVLEHVH-QYAPKPAHN 148
Query: 122 YDESAYAFEFFEKKAQIRSLLNISIGCDKKCAYCIVPHTRGKEISIPMDLILKEAEKLAN 181
S + + + L IS GC+ +C +CI+P RG +S P+ I+ EAE+L N
Sbjct: 149 PFTSLVPDHGVKLTPKHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPVGEIIGEAERLKN 208
Query: 182 NGTKELMLLGQNVNNYGARFSSEHA---------KVDFSDLLDKLSEIQGIERIRFTSPH 232
G KEL+++ Q+ + YG ++H+ + + L ++L ++ R+ + P+
Sbjct: 209 AGVKELLVISQDTSAYGV--DTKHSLGFANGSPVRHNIKALSEELGKMGIWVRLHYVYPY 266
Query: 233 PLHMNDGFLERFAKNPKVCKSIHMPLQSGSSAVLKMMRRGYSKEWFLNRVERLKALVPEV 292
P H+ D + A+ KV + +P Q S VLKMM+R E L R+++ + + PE+
Sbjct: 267 P-HV-DEIIPLMAEG-KVLPYLDIPFQHASPRVLKMMKRPGQAERTLERIKKWREICPEL 323
Query: 293 GISTDIIVGFPNESDKDFEDTMEVLEKVRFDTLYSFIYSPRPFTEAGAWKERVPLEVSSS 352
I + IVGFP E+++DF+ ++ L++ + D + F YSP A ++++P +V
Sbjct: 324 VIRSTFIVGFPGETEEDFQILLDWLKEAQLDRVGCFKYSPVEGAAANEIEDQIPEDVKQD 383
Query: 353 RLERLQNRHKEILEEKAKLEVGKTHVVLVENRREMDNQIVGFEGRS-----DTGKFIEVT 407
R ER +EI K + +G T VL++ E+D + G GR+ + + +
Sbjct: 384 RFERFMLVQQEISAAKLQKRIGSTMQVLID---EVDEE--GAIGRTYADAPEIDGLVYLN 438
Query: 408 CKEKRNPGELVKVEIISHS 426
+ PGELV V +I H+
Sbjct: 439 GETNLKPGELVNV-VIEHA 456
>ref|NP_286601.1| (NC_002655) orf, hypothetical protein [Escherichia coli O157:H7
EDL933]
ref|NP_308942.1| (NC_002695) hypothetical protein [Escherichia coli O157:H7]
ref|NP_415356.1| (NC_000913) orf, hypothetical protein [Escherichia coli K12]
sp|P75802|YLIG_ECOLI Hypothetical protein yliG
pir||C64821 conserved hypothetical protein b0835 - Escherichia coli
gb|AAC73922.1| (AE000185) orf, hypothetical protein [Escherichia coli K12]
dbj|BAA35530.1| (D90721) Hypothetical 51.7 kd protein in dnaJ-rpsU interegenic
region. [Escherichia coli]
dbj|BAA35538.1| (D90722) Hypothetical 51.7 kd protein in dnaJ-rpsU interegenic
region. [Escherichia coli]
gb|AAG55211.1|AE005265_1 (AE005265) orf, hypothetical protein [Escherichia coli O157:H7
EDL933]
dbj|BAB34338.1| (AP002553) hypothetical protein [Escherichia coli O157:H7]
Length = 441
Score = 165 bits (418), Expect = 9e-40
Identities = 117/444 (26%), Positives = 217/444 (48%), Gaps = 47/444 (10%)
Query: 2 KVYIETMGCAMNSRDSEHLLSELSKLDYKETNDPKTADLILINTCSVREKPERKLFSEIG 61
K+ ++GC N DSE +L+EL Y AD++++NTC + ++ IG
Sbjct: 9 KIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQESLEAIG 68
Query: 62 QFAKIKKPNAKIGVCGCTASHMGADILKKAPSVSFVLGARNVSKISQVIH----KEK--- 114
+ N K+ V GC + I + P V + G + ++ + +H K K
Sbjct: 69 EALN---ENGKVIVTGCLGAKED-QIREVHPKVLEITGPHSYEQVLEHVHHYVPKPKHNP 124
Query: 115 ----AVEVAIDYDESAYAFEFFEKKAQIRSLLNISIGCDKKCAYCIVPHTRGKEISIPMD 170
E + YA+ L IS GC+ +C +CI+P RG +S P+
Sbjct: 125 FLSLVPEQGVKLTPRHYAY------------LKISEGCNHRCTFCIIPSMRGDLVSRPIG 172
Query: 171 LILKEAEKLANNGTKELMLLGQNVNNYGARF-------SSEHAKVDFSDLLDKLSEIQGI 223
+L EA++L + G KE++++ Q+ + YG + E K L ++LS++
Sbjct: 173 EVLSEAKRLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKLGIW 232
Query: 224 ERIRFTSPHPLHMNDGFLERFAKNPKVCKSIHMPLQSGSSAVLKMMRRGYSKEWFLNRVE 283
R+ + P+P H++D + K+ + +PLQ S +LK+M+R S + L R++
Sbjct: 233 TRLHYVYPYP-HVDD--VIPLMAEGKILPYLDIPLQHASPRILKLMKRPGSVDRQLARIK 289
Query: 284 RLKALVPEVGISTDIIVGFPNESDKDFEDTMEVLEKVRFDTLYSFIYSPRPFTEAGAWKE 343
+ + + PE+ + + IVGFP E+++DF+ ++ L++ R D + F YSP +A A +
Sbjct: 290 QWREICPELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANALPD 349
Query: 344 RVPLEVSSSRLERLQNRHKEILEEKAKLEVGKTHVVLVENRREMDNQIVGFEGRS----- 398
+VP EV R R ++I E+ + +VG+ +V+++ E+D + G GRS
Sbjct: 350 QVPEEVKEERWNRFMQLQQQISAERLQEKVGREILVIID---EVDEE--GAIGRSMADAP 404
Query: 399 DTGKFIEVTCKEKRNPGELVKVEI 422
+ + + + PG++++V++
Sbjct: 405 EIDGAVYLNGETNVKPGDILRVKV 428
>gb|AAL03926.1|U30252_14 (U30252) unknown [Synechococcus sp. PCC 7942]
Length = 452
Score = 165 bits (417), Expect = 1e-39
Identities = 107/395 (27%), Positives = 190/395 (48%), Gaps = 12/395 (3%)
Query: 8 MGCAMNSRDSEHLLSELSKLDYKETNDPKTADLILINTCSVREKPERKLFSEIGQFAKIK 67
+GC N D+EH++ L++ Y + AD++++NTCS + + + + A+
Sbjct: 12 LGCEKNRIDTEHMIGLLAEAGYGIDANEALADVVVVNTCSFIQAAREESVRTLVELAESG 71
Query: 68 KPNAKIGVCGCTASHMGADILKKAPSVSFVLGARNVSKISQVIHKEKAVEV--AIDYDES 125
K KI + GC A H +L + P ++G + +I V+ + ++ E AI + S
Sbjct: 72 K---KIVIAGCLAQHFQDQLLAELPEAIALVGTGDYHRIVDVLQRTESGERVNAISQEPS 128
Query: 126 AYAFEFFEKKAQIRSL---LNISIGCDKKCAYCIVPHTRGKEISIPMDLILKEAEKLANN 182
A E + S L ++ GCD +CA+CI+PH RGK+ S ++ I+ EA++LA
Sbjct: 129 FIADENLPRYRTTTSAVAYLRVAEGCDYRCAFCIIPHLRGKQRSRSIESIVAEAKQLAAE 188
Query: 183 GTKELMLLGQNVNNYGARFSSEHAKVDFSDLLDKLSEIQGIERIRFTSPHPLHMNDGFLE 242
G +EL+L+ Q NYG + K ++LL +L ++ + IR +P + +
Sbjct: 189 GVQELVLISQITTNYGL---DRYGKPMLAELLRQLGQVD-VPWIRIHYAYPTGLTPEVIA 244
Query: 243 RFAKNPKVCKSIHMPLQSGSSAVLKMMRRGYSKEWFLNRVERLKALVPEVGISTDIIVGF 302
+ V + +PLQ +LK M R + +E+LK +P+ + T I GF
Sbjct: 245 AIRETHNVLPYLDLPLQHSHPEILKAMNRPWQGNVNDRIIEKLKEALPDAVLRTTFIAGF 304
Query: 303 PNESDKDFEDTMEVLEKVRFDTLYSFIYSPRPFTEAGAWKERVPLEVSSSRLERLQNRHK 362
P E+++ F + +++ FD + F +SP T A VP +V +R + L +
Sbjct: 305 PGETEEHFRHLQQFIQRHEFDHVGVFAFSPEEGTAAIDLPNPVPDDVKEARRDALMATQQ 364
Query: 363 EILEEKAKLEVGKTHVVLVENRREMDNQIVGFEGR 397
I E + + ++G+ VL+E +G R
Sbjct: 365 PIAERRNRAQIGRLVDVLIEQEHPSTGLKIGRSAR 399
>ref|NP_143704.1| (NC_000961) hypothetical protein [Pyrococcus horikoshii]
pir||F71200 hypothetical protein PH1875 - Pyrococcus horikoshii
Length = 432
Score = 164 bits (415), Expect = 2e-39
Identities = 119/397 (29%), Positives = 200/397 (49%), Gaps = 21/397 (5%)
Query: 1 MKVYIETMGCAMNSRDSEHLLSELSKLDYKETNDPKTADLILINTCSVREKPERKLFSEI 60
+KVYIE GCA N D E + + L ++ P+ ++++++N+C+V++ ERK+ I
Sbjct: 9 VKVYIENYGCARNRADGEIMAALLYLSGHEIVESPEESEIVVVNSCAVKDPTERKIARRI 68
Query: 61 GQFAKIKKPNAKIGVCGCTASHMGADILKKAPSVSFVLGARNVSKISQVIHK----EKAV 116
+ K K+ V GC H+ D++ + VS +LG +++ +I Q + EK +
Sbjct: 69 RELLDNGK---KVIVTGCLP-HVNPDVIDER--VSAILGVKSIDRIVQAVEYAMRGEKLI 122
Query: 117 EVAIDYDESAYAFEFFEKKAQ-IRSLLNISIGCDKKCAYCIVPHTRGKEISIPMDLILKE 175
V + +F + + +L I+ GC C YC RG S + I+
Sbjct: 123 SVPDWKKRNLDKLDFPRLSPRNVYFILPIAEGCLNACTYCATRLARGVLKSYSPEKIIGW 182
Query: 176 AEKLANNGTKELMLLGQNVNNYGARFSSEHAKVDFSDLLDKLSEIQGIERIRFTSPHPLH 235
+ G KE+ L ++ YG + AK L+D+++ I+G RIR +P H
Sbjct: 183 VKWAIKQGYKEIWLSAEDTGCYGFDIGTNLAK-----LIDEITAIEGEFRIRVGMMNPNH 237
Query: 236 MNDGFLERFA---KNPKVCKSIHMPLQSGSSAVLKMMRRGYSKEWFLNRVERLKALVPEV 292
+ FL+ K+ KV K +H+P+QSG + +L+ M R Y+ E F V+ + PE+
Sbjct: 238 VLK-FLDELIDAYKDEKVYKFLHLPVQSGDNEILRKMGRMYTVEEFEEIVKAFRREFPEL 296
Query: 293 GISTDIIVGFPNESDKDFEDTMEVLEKVRFDTLYSFIYSPRPFTEAGAWKERVPLEVSSS 352
+ TDIIVGFP ES++ F+ ++E+++++R D + YSPRP T A WK+ +P V
Sbjct: 297 NLHTDIIVGFPGESEEAFQRSVELIKRIRPDKVNVSRYSPRPGTIAAKWKQ-LPGWVVKE 355
Query: 353 RLERLQNRHKEILEEKAKLEVGKTHVVLVENRREMDN 389
R L +I E + +GK VL+ + N
Sbjct: 356 RSRLLHRIRLQISYEINRKYIGKKVKVLIHGEGKKGN 392
>sp|O59545|YI75_PYRHO Hypothetical protein PH1875
Length = 425
Score = 164 bits (415), Expect = 2e-39
Identities = 119/397 (29%), Positives = 200/397 (49%), Gaps = 21/397 (5%)
Query: 1 MKVYIETMGCAMNSRDSEHLLSELSKLDYKETNDPKTADLILINTCSVREKPERKLFSEI 60
+KVYIE GCA N D E + + L ++ P+ ++++++N+C+V++ ERK+ I
Sbjct: 2 VKVYIENYGCARNRADGEIMAALLYLSGHEIVESPEESEIVVVNSCAVKDPTERKIARRI 61
Query: 61 GQFAKIKKPNAKIGVCGCTASHMGADILKKAPSVSFVLGARNVSKISQVIHK----EKAV 116
+ K K+ V GC H+ D++ + VS +LG +++ +I Q + EK +
Sbjct: 62 RELLDNGK---KVIVTGCLP-HVNPDVIDER--VSAILGVKSIDRIVQAVEYAMRGEKLI 115
Query: 117 EVAIDYDESAYAFEFFEKKAQ-IRSLLNISIGCDKKCAYCIVPHTRGKEISIPMDLILKE 175
V + +F + + +L I+ GC C YC RG S + I+
Sbjct: 116 SVPDWKKRNLDKLDFPRLSPRNVYFILPIAEGCLNACTYCATRLARGVLKSYSPEKIIGW 175
Query: 176 AEKLANNGTKELMLLGQNVNNYGARFSSEHAKVDFSDLLDKLSEIQGIERIRFTSPHPLH 235
+ G KE+ L ++ YG + AK L+D+++ I+G RIR +P H
Sbjct: 176 VKWAIKQGYKEIWLSAEDTGCYGFDIGTNLAK-----LIDEITAIEGEFRIRVGMMNPNH 230
Query: 236 MNDGFLERFA---KNPKVCKSIHMPLQSGSSAVLKMMRRGYSKEWFLNRVERLKALVPEV 292
+ FL+ K+ KV K +H+P+QSG + +L+ M R Y+ E F V+ + PE+
Sbjct: 231 VLK-FLDELIDAYKDEKVYKFLHLPVQSGDNEILRKMGRMYTVEEFEEIVKAFRREFPEL 289
Query: 293 GISTDIIVGFPNESDKDFEDTMEVLEKVRFDTLYSFIYSPRPFTEAGAWKERVPLEVSSS 352
+ TDIIVGFP ES++ F+ ++E+++++R D + YSPRP T A WK+ +P V
Sbjct: 290 NLHTDIIVGFPGESEEAFQRSVELIKRIRPDKVNVSRYSPRPGTIAAKWKQ-LPGWVVKE 348
Query: 353 RLERLQNRHKEILEEKAKLEVGKTHVVLVENRREMDN 389
R L +I E + +GK VL+ + N
Sbjct: 349 RSRLLHRIRLQISYEINRKYIGKKVKVLIHGEGKKGN 385
>ref|NP_455386.1| (NC_003198) conserved hypothetical protein [Salmonella enterica
subsp. enterica serovar Typhi]
emb|CAD05298.1| (AL627268) conserved hypothetical protein [Salmonella enterica
subsp. enterica serovar Typhi]
Length = 441
Score = 164 bits (414), Expect = 2e-39
Identities = 119/444 (26%), Positives = 215/444 (47%), Gaps = 47/444 (10%)
Query: 2 KVYIETMGCAMNSRDSEHLLSELSKLDYKETNDPKTADLILINTCSVREKPERKLFSEIG 61
K+ ++GC N DSE +L+EL Y AD++++NTC + ++ IG
Sbjct: 9 KIGFVSLGCPKNLVDSERILTELRTEGYDVVPHYDDADMVIVNTCGFIDSAVQESLEAIG 68
Query: 62 QFAKIKKPNAKIGVCGCTASHMGADILKKAPSVSFVLGARNVSKISQVIH----KEK--- 114
+ N K+ V GC + I + P V + G + ++ Q +H K K
Sbjct: 69 EALN---ENGKVIVTGCLGAKED-QIREVHPKVLEITGPHSYEQVLQHVHHYVPKPKHNP 124
Query: 115 ----AVEVAIDYDESAYAFEFFEKKAQIRSLLNISIGCDKKCAYCIVPHTRGKEISIPMD 170
E + YA+ L IS GC+ +C +CI+P RG +S P+
Sbjct: 125 FLSLVPEQGVKLTPRHYAY------------LKISEGCNHRCTFCIIPSMRGDLVSRPIG 172
Query: 171 LILKEAEKLANNGTKELMLLGQNVNNYGARF-------SSEHAKVDFSDLLDKLSEIQGI 223
+L EA++L + G KE++++ Q+ + YG + E K L ++LS++
Sbjct: 173 DVLSEAKRLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPMKTSMVSLCEQLSKLGVW 232
Query: 224 ERIRFTSPHPLHMNDGFLERFAKNPKVCKSIHMPLQSGSSAVLKMMRRGYSKEWFLNRVE 283
R+ + P+P H++D + K+ + +PLQ S +LK+M+R S + L R++
Sbjct: 233 TRLHYVYPYP-HVDD--VIPLMAEGKILPYLDIPLQHASPRILKLMKRPGSVDRQLARIK 289
Query: 284 RLKALVPEVGISTDIIVGFPNESDKDFEDTMEVLEKVRFDTLYSFIYSPRPFTEAGAWKE 343
+ + + PE+ + + IVGFP E+++DF+ ++ L++ R D + F YSP A +
Sbjct: 290 QWREICPELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGAGANELPD 349
Query: 344 RVPLEVSSSRLERLQNRHKEILEEKAKLEVGKTHVVLVENRREMDNQIVGFEGRS----- 398
+VP EV R R ++I E+ + +VG+ +V+V+ E+D + G GRS
Sbjct: 350 QVPEEVKEERWNRFMQLQQQISAERLQEKVGREILVIVD---EVDEE--GAIGRSMADAP 404
Query: 399 DTGKFIEVTCKEKRNPGELVKVEI 422
+ + + + PG++V+V++
Sbjct: 405 EIDGAVYLNGETNVKPGDIVRVKV 428
>ref|NP_459829.1| (NC_003197) putative Fe-S oxidoreductases family 1 [Salmonella
typhimurium LT2]
gb|AAL19788.1| (AE008735) putative Fe-S oxidoreductases family 1 [Salmonella
typhimurium LT2]
Length = 441
Score = 164 bits (414), Expect = 2e-39
Identities = 119/444 (26%), Positives = 215/444 (47%), Gaps = 47/444 (10%)
Query: 2 KVYIETMGCAMNSRDSEHLLSELSKLDYKETNDPKTADLILINTCSVREKPERKLFSEIG 61
K+ ++GC N DSE +L+EL Y AD++++NTC + ++ IG
Sbjct: 9 KIGFVSLGCPKNLVDSERILTELRTEGYDVVPRYDDADMVIVNTCGFIDSAVQESLEAIG 68
Query: 62 QFAKIKKPNAKIGVCGCTASHMGADILKKAPSVSFVLGARNVSKISQVIH----KEK--- 114
+ N K+ V GC + I + P V + G + ++ Q +H K K
Sbjct: 69 EALN---ENGKVIVTGCLGAKED-QIREVHPKVLEITGPHSYEQVLQHVHHYVPKPKHNP 124
Query: 115 ----AVEVAIDYDESAYAFEFFEKKAQIRSLLNISIGCDKKCAYCIVPHTRGKEISIPMD 170
E + YA+ L IS GC+ +C +CI+P RG +S P+
Sbjct: 125 FLSLVPEQGVKLTPRHYAY------------LKISEGCNHRCTFCIIPSMRGDLVSRPIG 172
Query: 171 LILKEAEKLANNGTKELMLLGQNVNNYGARF-------SSEHAKVDFSDLLDKLSEIQGI 223
+L EA++L + G KE++++ Q+ + YG + E K L ++LS++
Sbjct: 173 DVLSEAKRLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKLGVW 232
Query: 224 ERIRFTSPHPLHMNDGFLERFAKNPKVCKSIHMPLQSGSSAVLKMMRRGYSKEWFLNRVE 283
R+ + P+P H++D + K+ + +PLQ S +LK+M+R S + L R++
Sbjct: 233 TRLHYVYPYP-HVDD--VIPLMAEGKILPYLDIPLQHASPRILKLMKRPGSVDRQLARIK 289
Query: 284 RLKALVPEVGISTDIIVGFPNESDKDFEDTMEVLEKVRFDTLYSFIYSPRPFTEAGAWKE 343
+ + + PE+ + + IVGFP E+++DF+ ++ L++ R D + F YSP A +
Sbjct: 290 QWREICPELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGAGANELPD 349
Query: 344 RVPLEVSSSRLERLQNRHKEILEEKAKLEVGKTHVVLVENRREMDNQIVGFEGRS----- 398
+VP EV R R ++I E+ + +VG+ +V+V+ E+D + G GRS
Sbjct: 350 QVPEEVKEERWNRFMQLQQQISAERLQEKVGREILVIVD---EVDEE--GAIGRSMADAP 404
Query: 399 DTGKFIEVTCKEKRNPGELVKVEI 422
+ + + + PG++V+V++
Sbjct: 405 EIDGAVYLNGETNVKPGDIVRVKV 428
>ref|NP_127405.1| (NC_000868) hypothetical protein [Pyrococcus abyssi]
sp|Q9UXX9|YB34_PYRAB Hypothetical protein PAB1134
pir||D75024 hypothetical protein PAB1134 - Pyrococcus abyssi (strain Orsay)
emb|CAB50634.1| (AJ248288) hypothetical protein [Pyrococcus abyssi]
Length = 425
Score = 163 bits (412), Expect = 4e-39
Identities = 114/397 (28%), Positives = 198/397 (49%), Gaps = 21/397 (5%)
Query: 1 MKVYIETMGCAMNSRDSEHLLSELSKLDYKETNDPKTADLILINTCSVREKPERKLFSEI 60
+K+YIE GCA N D E + + L ++ DP +++++N+C+V++ ERK+ I
Sbjct: 2 VKIYIENYGCARNRADGEIMAALLHLAGHEIVYDPDEGEIVVVNSCAVKDPTERKIARRI 61
Query: 61 GQFAKIKKPNAKIGVCGCTASHMGADILKKAPSVSFVLGARNVSKISQVIHK----EKAV 116
+ K K+ V GC H+ D++ + VS +LG +++ +I Q + EK +
Sbjct: 62 KELLDSGK---KVIVTGCLP-HVNPDVIDER--VSGILGVKSIDRIIQAVEYALRGEKLI 115
Query: 117 EVAIDYDESAYAFEFFEKKAQ-IRSLLNISIGCDKKCAYCIVPHTRGKEISIPMDLILKE 175
V + +F + + ++ I+ GC C YC RG S + I+
Sbjct: 116 SVPDWRKRNLDKLDFPRLSPRTVYFIVPIAEGCLNACTYCATRFARGVLKSYSPEKIVGW 175
Query: 176 AEKLANNGTKELMLLGQNVNNYGARFSSEHAKVDFSDLLDKLSEIQGIERIRFTSPHPLH 235
+ G KE+ L ++ YG + AK LLD+++ I+G R+R +P H
Sbjct: 176 VKWAIKQGYKEIWLSAEDTGCYGFDIGTNLAK-----LLDEITAIEGEFRVRVGMMNPNH 230
Query: 236 MN---DGFLERFAKNPKVCKSIHMPLQSGSSAVLKMMRRGYSKEWFLNRVERLKALVPEV 292
+ D +E + ++ K+ K +H+P+QSG + +L+ M R Y+ E F V+ + P++
Sbjct: 231 VLKFLDELIEAY-QDEKIYKFLHLPVQSGDNDILRRMGRNYTVEEFEEIVKEFRKKFPDL 289
Query: 293 GISTDIIVGFPNESDKDFEDTMEVLEKVRFDTLYSFIYSPRPFTEAGAWKERVPLEVSSS 352
+ TDIIVGFP E D+ F+ ++E++ ++R D + YSPRP T A WK+ +P +
Sbjct: 290 NLHTDIIVGFPGEDDEAFQRSVELIRRIRPDKVNVSRYSPRPGTIAAKWKQ-LPGWIVKE 348
Query: 353 RLERLQNRHKEILEEKAKLEVGKTHVVLVENRREMDN 389
R L +I E + +GK VL+ + N
Sbjct: 349 RSRLLHRIRLQISYEINQKYIGKKVEVLIHGEGKKGN 385
>ref|NP_629877.1| (NC_003888) conserved hypothetical protein SC7C7.07 [Streptomyces
coelicolor A3(2)]
pir||T35685 hypothetical protein SC7C7.07 SC7C7.07 - Streptomyces coelicolor
emb|CAA19853.1| (AL031031) conserved hypothetical protein SC7C7.07 [Streptomyces
coelicolor A3(2)]
Length = 493
Score = 162 bits (409), Expect = 9e-39
Identities = 118/425 (27%), Positives = 187/425 (43%), Gaps = 50/425 (11%)
Query: 3 VYIETMGCAMNSRDSEHLLSELSKLDYKETNDPKTADLILINTCSVREKPERKLFSEIGQ 62
V + T+GCA N DSE L L +K +D + AD+ ++NTC E ++ + +
Sbjct: 7 VALVTLGCARNEVDSEELAGRLEADGWKLVDDAEEADVAVVNTCGFVEAAKKDSVDALLE 66
Query: 63 FAKIK---KPNAKIGVCGCTASHMGADILKKAPSVSFVLG-------------------- 99
+K + A + V GC A G ++ P VLG
Sbjct: 67 ANDLKGHGRTQAVVAV-GCMAERYGKELADALPEADGVLGFDDYADISDRLQTILNGGIH 125
Query: 100 -------ARNVSKISQVIHKEKAVEVAI------DYDESAYAFEFFEKKAQIRSLLN--- 143
R + IS +E VA+ D E +A +R L+
Sbjct: 126 AAHTPRDRRKLLPISPAERQEAGAAVALPGHGPTDLPEGVAPAS--GPRAPLRRRLDGSP 183
Query: 144 -----ISIGCDKKCAYCIVPHTRGKEISIPMDLILKEAEKLANNGTKELMLLGQNVNNYG 198
++ GCD++C++C +P RG IS +L E LA G KE+ML+ +N +YG
Sbjct: 184 VASVKLASGCDRRCSFCAIPSFRGSFISRRPSDVLNETRWLAEQGVKEIMLVSENNTSYG 243
Query: 199 ARFSSEHAKVDFSDLLDKLSEIQGIERIRFTSPHPLHMNDGFLERFAKNPKVCKSIHMPL 258
LL L+E+ GIER+R + P M G ++ KV +
Sbjct: 244 KDLGDIRL---LESLLPNLAEVDGIERVRVSYLQPAEMRPGLIDVLTSTEKVAPYFDLSF 300
Query: 259 QSGSSAVLKMMRRGYSKEWFLNRVERLKALVPEVGISTDIIVGFPNESDKDFEDTMEVLE 318
Q + VL+ MRR + FL ++ +++ PE G+ ++ IVGFP ES+ D + L
Sbjct: 301 QHSAPNVLRAMRRFGDTDRFLELLDTIRSKAPEAGVRSNFIVGFPGESEADLAELERFLN 360
Query: 319 KVRFDTLYSFIYSPRPFTEAGAWKERVPLEVSSSRLERLQNRHKEILEEKAKLEVGKTHV 378
R D + F YS TEA + +++ +V + RL R+ +E++ ++A VG T
Sbjct: 361 HARLDAIGVFGYSDEEGTEAATYGDKLDEDVVAERLARVSRLAEELVSQRADERVGATVR 420
Query: 379 VLVEN 383
VLVE+
Sbjct: 421 VLVES 425
>gb|EAA02284.1| (AAAB01003427) ebiP1722 [Anopheles gambiae str. PEST]
Length = 433
Score = 161 bits (408), Expect = 1e-38
Identities = 115/435 (26%), Positives = 210/435 (47%), Gaps = 29/435 (6%)
Query: 2 KVYIETMGCAMNSRDSEHLLSELSKLDYKETNDPKTADLILINTCSVREKPERKLFSEIG 61
KV ++GC N DSE +L++L Y A+++++NTC + ++ IG
Sbjct: 9 KVGFVSLGCPKNLVDSERILTQLRTEGYDVVPSYDDAEVVVVNTCGFFDSAVQESLEAIG 68
Query: 62 QFAKIKKPNAKIGVCGCTASHMGADILKKAPSVSFVLGARNVSKISQVIHK--EKAVEVA 119
+ N K+ V GC + I + P V + G ++ +HK EK
Sbjct: 69 EALA---ENGKVIVTGCLGAKEN-QIREIHPKVLEITGPHAYEEVLGHVHKYVEKPTHNP 124
Query: 120 IDYDESAYAFEFFEKKAQIRSLLNISIGCDKKCAYCIVPHTRGKEISIPMDLILKEAEKL 179
A + + + L IS GC+ +C +CI+P RG +S P+ +L EA++L
Sbjct: 125 FTSLVPAQGVKLTPRHY---AYLKISEGCNHRCTFCIIPSMRGDLVSRPIGEVLAEAKRL 181
Query: 180 ANNGTKELMLLGQNVNNYGAR-------FSSEHAKVDFSDLLDKLSEIQGIERIRFTSPH 232
G KE++++ Q+ + YG + K L ++L+++ R+ + P+
Sbjct: 182 KEAGVKEILVISQDTSAYGVDVKHRTGFYDGMPVKTSMVALCEELAKLGMWVRLHYVYPY 241
Query: 233 PLHMNDGFLERFAKNPKVCKSIHMPLQSGSSAVLKMMRRGYSKEWFLNRVERLKALVPEV 292
P H++D + ++ KV + +PLQ S +LK+M+R + E L R+++ + + PE+
Sbjct: 242 P-HVDD--VIPLMRDGKVLPYLDIPLQHASPRILKLMKRPGTVERTLERIQKWREICPEI 298
Query: 293 GISTDIIVGFPNESDKDFEDTMEVLEKVRFDTLYSFIYSPRPFTEAGAWKERVPLEVSSS 352
+ + IVGFP E++++F+ ++ ++K D + F YSP +A + VP EV
Sbjct: 299 TLRSTFIVGFPGETEEEFQMLLDFIDKAELDRVGCFKYSPVEGAKANELPDPVPEEVQEE 358
Query: 353 RLERLQNRHKEILEEKAKLEVGKTHVVLVENRREMDNQIVGFEGRS-----DTGKFIEVT 407
R +R +++ K +VGK +VL++ E+D + G GRS + + +
Sbjct: 359 RFQRFMELQQQVSIRKLARKVGKEMLVLID---EVDEE--GATGRSAADAPEIDGLVYLN 413
Query: 408 CKEKRNPGELVKVEI 422
+ PG++VKV I
Sbjct: 414 GETGLKPGDMVKVRI 428
>ref|NP_579641.1| (NC_003413) hypothetical protein [Pyrococcus furiosus DSM 3638]
gb|AAL82036.1| (AE010285) hypothetical protein [Pyrococcus furiosus DSM 3638]
Length = 425
Score = 160 bits (406), Expect = 2e-38
Identities = 119/396 (30%), Positives = 196/396 (49%), Gaps = 21/396 (5%)
Query: 2 KVYIETMGCAMNSRDSEHLLSELSKLDYKETNDPKTADLILINTCSVREKPERKLFSEIG 61
KVYIE GCA N D E + L Y+ + AD++++N+C+V++ E K+ I
Sbjct: 3 KVYIENYGCARNRADGEIMAGLLLSSGYEIVEGEENADIVVVNSCAVKDPTEVKIARRIR 62
Query: 62 QFAKIKKPNAKIGVCGCTASHMGADILKKAPSVSFVLGARNVSKISQVIHK----EKAVE 117
+ K K+ V GC H+ D + + VS VLG +++ +I Q + EK +
Sbjct: 63 ELLDRGK---KVIVTGCLP-HVNPDAIDER--VSAVLGVKSIDRIVQAVEYALRGEKLIS 116
Query: 118 VAIDYDESAYAFEFFEKKAQ-IRSLLNISIGCDKKCAYCIVPHTRGKEISIPMDLILKEA 176
V + +F + + +L I+ GC C YC RG S + I++
Sbjct: 117 VPDWRKRNLDKLDFPRLSPRGVHFILPIAEGCLNGCTYCATRSARGVLKSYSPEKIVEWV 176
Query: 177 EKLANNGTKELMLLGQNVNNYGARFSSEHAKVDFSDLLDKLSEIQGIERIRFTSPHPLHM 236
+ G KE+ L ++ YG + AK LLD+++ I+G RIR +P H+
Sbjct: 177 KWAIRQGYKEIWLSAEDTGCYGFDIGTNLAK-----LLDEITAIEGEFRIRVGMMNPNHV 231
Query: 237 N---DGFLERFAKNPKVCKSIHMPLQSGSSAVLKMMRRGYSKEWFLNRVERLKALVPEVG 293
D +E + K+ KV K +H+P+QSG + +L+ M R Y+ E F V + P++
Sbjct: 232 LKFLDELIEAY-KDEKVYKFLHLPVQSGDNEILRRMGRTYTVEEFEEIVNAFRREFPDLN 290
Query: 294 ISTDIIVGFPNESDKDFEDTMEVLEKVRFDTLYSFIYSPRPFTEAGAWKERVPLEVSSSR 353
+ TDIIVGFP ES++ F+ ++E++++++ D + YSPRP T A WK+ +P V R
Sbjct: 291 LHTDIIVGFPGESEEAFQRSLELIKRIKPDKVNVSRYSPRPGTIAAKWKQ-LPGWVVKER 349
Query: 354 LERLQNRHKEILEEKAKLEVGKTHVVLVENRREMDN 389
+ +I E + VG+ +LV + N
Sbjct: 350 SRIMHRVRLQISYEINQRYVGRKVDILVHGEGKKGN 385
>ref|NP_565035.1| (NM_105867) expressed protein [Arabidopsis thaliana]
gb|AAG51137.1|AC069273_8 (AC069273) unknown protein [Arabidopsis thaliana]
gb|AAK56263.1|AF367274_1 (AF367274) At1g72090/F28P5_4 [Arabidopsis thaliana]
Length = 601
Score = 158 bits (400), Expect = 1e-37
Identities = 105/344 (30%), Positives = 182/344 (52%), Gaps = 10/344 (2%)
Query: 3 VYIETMGCAMNSRDSEHLLSELSKLDYKETNDPKTADLILINTCSVREKPERKLFSEIGQ 62
+YI+T GC+ N DSE++ +LS Y T P+ ADL LINTC+V+ + + + I +
Sbjct: 66 IYIKTFGCSHNQSDSEYMAGQLSAFGYALTEVPEEADLWLINTCTVKSPSQSAMSTLITR 125
Query: 63 FAKIKKPNAKIGVCGCTASHMGADILKKAPSVSFVLGARNVSKISQVIHKE-KAVEVAID 121
KKP + + GC G+ LK+ VS V+G + + ++ +++ + K EV +
Sbjct: 126 GRSGKKP---LVIAGCVPQ--GSRDLKELEGVS-VVGVQQIDRVVEIVEETLKGHEVRLL 179
Query: 122 YDESAYAFEFFE-KKAQIRSLLNISIGCDKKCAYCIVPHTRGKEISIPMDLILKEAEKLA 180
++ A + + ++ +L I++GC C YC H RG S +D +++ +
Sbjct: 180 TRKTLPALDLPKVRRNNFIEILPINVGCLGACTYCKTKHARGHLGSYTVDSLVERVRTVI 239
Query: 181 NNGTKELMLLGQNVNNYGARFSSEHAKVDFSDLLDKLSEIQG-IERIRFTSPHPLHMNDG 239
+ G KE+ L ++ YG R + + + ++ +L Q + RI T+P + +
Sbjct: 240 SEGVKEIWLSSEDTGAYG-RDIGVNLPILLNAIVKELPSDQSTMLRIGMTNPPFILEHLK 298
Query: 240 FLERFAKNPKVCKSIHMPLQSGSSAVLKMMRRGYSKEWFLNRVERLKALVPEVGISTDII 299
+ ++P V +H+P+QSGS +VL M R Y+ F V+ L LVP + I+TDII
Sbjct: 299 EIAAVLRHPCVYTFLHVPVQSGSDSVLTAMNREYTASEFRTVVDTLTELVPGMQIATDII 358
Query: 300 VGFPNESDKDFEDTMEVLEKVRFDTLYSFIYSPRPFTEAGAWKE 343
GFP E+D+DF T+E+++ +F ++ + PRP T A K+
Sbjct: 359 CGFPGETDEDFSQTVELIKDYKFPQVHISQFYPRPGTPAAKMKK 402
>ref|NP_249607.1| (NC_002516) conserved hypothetical protein [Pseudomonas aeruginosa]
pir||G83532 conserved hypothetical protein PA0916 [imported] - Pseudomonas
aeruginosa (strain PAO1)
gb|AAG04305.1|AE004525_13 (AE004525) conserved hypothetical protein [Pseudomonas aeruginosa]
Length = 440
Score = 158 bits (399), Expect = 1e-37
Identities = 125/438 (28%), Positives = 210/438 (47%), Gaps = 34/438 (7%)
Query: 2 KVYIETMGCAMNSRDSEHLLSELSKLDYKETNDPKTADLILINTCSVREKPERKLFSEIG 61
KV ++GC DSE +L++L Y+ + AD++++NTC + + + IG
Sbjct: 7 KVGFVSLGCPKALVDSERILTQLRMEGYEVVPTYEDADVVVVNTCGFIDSAKAESLEVIG 66
Query: 62 QFAKIKKPNAKIGVCGCTASHMGADILKKAPSVSFVLGARNVSKISQVIHKEKAVEVAID 121
+ N K+ V GC A I PSV V G + ++ +H+ + +
Sbjct: 67 EAIA---ENGKVIVTGCMGVEEHA-IRDVHPSVLAVTGPQQYEQVVTAVHEVVPPKTEHN 122
Query: 122 YDESAYAFEFFEKKAQIRSLLNISIGCDKKCAYCIVPHTRGKEISIPMDLILKEAEKLAN 181
+ + + + L IS GC+ C++CI+P RGK +S P+ +L EAE+L
Sbjct: 123 PLVDLVPPQGVKLTPRHYAYLKISEGCNHSCSFCIIPSMRGKLVSRPVGDVLSEAERLVK 182
Query: 182 NGTKELMLLGQNVNNYGAR-------FSSEHAKVDFSDLLDKLSEIQGIERIRFTSPHPL 234
G KEL+++ Q+ + YG ++ + K +L + LS + R+ + P+P
Sbjct: 183 AGVKELLVISQDTSAYGVDLKYKTDFWNGQPVKTRMKELCEALSSMGVWVRLHYVYPYP- 241
Query: 235 HMNDGFLERFAKNPKVCKSIHMPLQSGSSAVLKMMRRGYSKEWFLNRVERLKALVPEVGI 294
D + A K+ + +P Q S VLK M+R ++ L R+++ + + PE+ I
Sbjct: 242 -NVDDVIPLMAAG-KLLPYLDIPFQHASPKVLKAMKRPAFEDKTLARIKQWREICPELTI 299
Query: 295 STDIIVGFPNESDKDFEDTMEVLEKVRFDTLYSFIYSP---RPFTEAGAWKERVPLEVSS 351
+ IVGFP E+++DF+ ++ L + + D + F YSP P E G E VP EV
Sbjct: 300 RSTFIVGFPGETEEDFQYLLDWLTEAQLDRVGCFQYSPVEGAPANELGL--EPVPDEVKQ 357
Query: 352 SRLERLQNRHKEILEEKAKLEVGKTHVVLVENRREMDNQIVGFEGRS-------DTGKFI 404
R ER + I + +L+VGK VL++ E+D Q G GRS D F+
Sbjct: 358 DRWERFMAHQQAISAARLQLKVGKEIEVLID---EVDEQ--GAVGRSWADAPEIDGNVFV 412
Query: 405 EVTCKEKRNPGELVKVEI 422
+ ++ PG+ V+V I
Sbjct: 413 D---SDELKPGDKVRVRI 427
>gb|EAA09381.1| (AAAB01008900) agCP15149 [Anopheles gambiae str. PEST]
Length = 514
Score = 158 bits (399), Expect = 1e-37
Identities = 127/439 (28%), Positives = 212/439 (47%), Gaps = 33/439 (7%)
Query: 3 VYIETMGCAMNSRDSEHLLSELSKLDYKETNDPKTADLILINTCSVREKPERKLFSEIGQ 62
+Y++T GCA N+ D+E++ +L++ Y T+D +ADL ++N+C+V+ E +EI
Sbjct: 68 IYMKTWGCAHNTSDTEYMAGQLAQYGYNLTSDKDSADLWVLNSCTVKNPSEDTFRNEIEA 127
Query: 63 FAKIKKPNAKIGVCGCTASHMGADILKKAPSVSFVLGARNVSKISQVI------HKEKAV 116
+ K + V GC K SV +G + + ++++V+ H + +
Sbjct: 128 AHQAGK---HVVVAGCVPQAAPRSDYLKGLSV---VGVQQIDRVAEVVEETLKGHSVRLL 181
Query: 117 EVA-IDYDESAYAFEFFEK--KAQIRSLLNISIGCDKKCAYCIVPHTRGKEISIPMDLIL 173
+ +D + A K K + ++ I+ GC C YC R +S P+ I+
Sbjct: 182 QAKKVDGRKVAGPKLALPKVRKNPLIEVIPINSGCLNACTYCKTKFARADLVSYPVQEIV 241
Query: 174 KEAEKLANNGTKELMLLGQNVNNYGARFSSEHAKVDFSDLLDKLSEI--QG-IERIRFTS 230
A+++ +G E+ L ++ YG S +LL +L E+ +G + R+ T+
Sbjct: 242 DRAQQVFQDGVCEIWLTSEDTGTYGRDIGSS-----LPELLWQLVEVIPEGCMMRLGMTN 296
Query: 231 PHPLHMNDGFLERFAKNPKVCKSIHMPLQSGSSAVLKMMRRGYSKEWFLNRVERLKALVP 290
P + + + + +P+V +H+P+QSGS A+L MRR Y + F V+ L+A VP
Sbjct: 297 PPYILEHLDEMAKILSHPRVYSFLHIPVQSGSDAILGEMRREYCVKDFERMVDFLRAQVP 356
Query: 291 EVGISTDIIVGFPNESDKDFEDTMEVLEKVRFDTLYSFIYSPRPFTEAGAWKERVPLEVS 350
+ I+TDII GFP E++ DF+DT+ + EK +F +L+ + PRP T A A +VP
Sbjct: 357 GITIATDIICGFPGETEADFDDTLALCEKYQFPSLFINQFFPRPGTPA-AKMTKVPANEV 415
Query: 351 SSRLERLQNRHKEILEEKAKLEVGKTHVVLVENRREMDNQIVGFEGRSDTGKFIEVTCKE 410
+R +RL + E K E G VLV VG KF E
Sbjct: 416 KTRTKRLTDLFHS-YEPYKKYEAGTKQTVLVTEISHDRKHFVGH------NKFYEQILLP 468
Query: 411 KRNP--GELVKVEIISHSK 427
N G+ V+VEI +K
Sbjct: 469 MHNNLLGKQVEVEITGCTK 487
>ref|XP_110019.1| (XM_110019) RIKEN cDNA 6620401C13 [Mus musculus]
ref|XP_127259.1| (XM_127259) RIKEN cDNA 6620401C13 [Mus musculus]
ref|NP_653119.1| (NM_144536) RIKEN cDNA 1190005B03 [Mus musculus]
gb|AAH16073.1|AAH16073 (BC016073) Unknown (protein for MGC:27555) [Mus musculus]
Length = 578
Score = 157 bits (398), Expect = 2e-37
Identities = 106/368 (28%), Positives = 185/368 (49%), Gaps = 24/368 (6%)
Query: 2 KVYIETMGCAMNSRDSEHLLSELSKLDYKETNDPKTADLILINTCSVREKPERKLFSEIG 61
K++I T GC+ N+ D E++ +L+ YK T + ADL L+N+C+V+ E + I
Sbjct: 64 KIWIRTWGCSHNNSDGEYMAGQLAAYGYKITENASDADLWLLNSCTVKNPAEDHFRNSI- 122
Query: 62 QFAKIKKPNAKIGVCGCTASHMGADILKKAPSVSFVLGARNVSKISQVIH---KEKAVEV 118
K ++ N K+ + GC K S+ +G + + ++ +V+ K +V +
Sbjct: 123 --KKAQEENKKVVLAGCVPQAQPRQDYLKGLSI---IGVQQIDRVVEVVEETIKGHSVRL 177
Query: 119 AIDYDESAYAFEFFE------KKAQIRSLLNISIGCDKKCAYCIVPHTRGKEISIPMDLI 172
++ +K + +++I+ GC C YC H RG S P+D +
Sbjct: 178 LGQKKDNGKRLGGARLDLPKIRKNPLIEIISINTGCLNACTYCKTKHARGNLASYPIDEL 237
Query: 173 LKEAEKLANNGTKELMLLGQNVNNYGARFSSEHAKVDFSDLLDKLSEI---QGIERIRFT 229
++ A++ G E+ L ++ YG + D LL KL E+ + R+ T
Sbjct: 238 VERAKQSFQEGVCEIWLTSEDTGAYGRDIGT-----DLPTLLWKLVEVIPEGAMLRLGMT 292
Query: 230 SPHPLHMNDGFLERFAKNPKVCKSIHMPLQSGSSAVLKMMRRGYSKEWFLNRVERLKALV 289
+P + + + + +P+V +H+P+QS S +VL M+R Y F V+ LK V
Sbjct: 293 NPPYILEHLEEMAKILNHPRVYAFLHIPVQSASDSVLMDMKREYCVADFKRVVDFLKEKV 352
Query: 290 PEVGISTDIIVGFPNESDKDFEDTMEVLEKVRFDTLYSFIYSPRPFTEAGAWKERVPLEV 349
P + I+TDII GFP E+D+DF++T++++E+ +F +L+ + PRP T A A E+VP V
Sbjct: 353 PGITIATDIICGFPGETDQDFQETVKLVEEYKFPSLFINQFYPRPGTPA-AKAEQVPAHV 411
Query: 350 SSSRLERL 357
R + L
Sbjct: 412 KKQRTKDL 419
>ref|NP_060244.1| (NM_017774) hypothetical protein FLJ20342 [Homo sapiens]
dbj|BAA91102.1| (AK000349) unnamed protein product [Homo sapiens]
Length = 579
Score = 157 bits (398), Expect = 2e-37
Identities = 107/368 (29%), Positives = 185/368 (50%), Gaps = 24/368 (6%)
Query: 2 KVYIETMGCAMNSRDSEHLLSELSKLDYKETNDPKTADLILINTCSVREKPERKLFSEIG 61
K++I T GC+ N+ D E++ +L+ YK T + ADL L+N+C+V+ E + I
Sbjct: 65 KIWIRTWGCSHNNSDGEYMAGQLAAYGYKITENASDADLWLLNSCTVKNPAEDHFRNSI- 123
Query: 62 QFAKIKKPNAKIGVCGCTASHMGADILKKAPSVSFVLGARNVSKISQVIH---KEKAVEV 118
K ++ N KI + GC K S+ +G + + ++ +V+ K +V +
Sbjct: 124 --KKAQEENKKIVLAGCVPQAQPRQDYLKGLSI---IGVQQIDRVVEVVEETIKGHSVRL 178
Query: 119 AIDYDESAYAFEFFE------KKAQIRSLLNISIGCDKKCAYCIVPHTRGKEISIPMDLI 172
++ +K + +++IS GC C YC H RG S P+D +
Sbjct: 179 LGQKKDNGRRLGGARLDLPKIRKNPLIEIISISTGCLNACTYCKTKHARGNLASYPIDEL 238
Query: 173 LKEAEKLANNGTKELMLLGQNVNNYGARFSSEHAKVDFSDLLDKLSEI---QGIERIRFT 229
+ A++ G E+ L ++ YG + + LL KL E+ + R+ T
Sbjct: 239 VDRAKQSFQEGVCEIWLTSEDTGAYGRDIGT-----NLPTLLWKLVEVIPEGAMLRLGMT 293
Query: 230 SPHPLHMNDGFLERFAKNPKVCKSIHMPLQSGSSAVLKMMRRGYSKEWFLNRVERLKALV 289
+P + + + + +P+V +H+P+QS S +VL M+R Y F V+ LK V
Sbjct: 294 NPPYILEHLEEMAKILNHPRVYAFLHIPVQSASDSVLMEMKREYCVADFKRVVDFLKEKV 353
Query: 290 PEVGISTDIIVGFPNESDKDFEDTMEVLEKVRFDTLYSFIYSPRPFTEAGAWKERVPLEV 349
P + I+TDII GFP E+D+DF++T++++E+ +F +L+ + PRP T A A E+VP +V
Sbjct: 354 PGITIATDIICGFPGETDQDFQETVKLVEEYKFPSLFINQFYPRPGTPA-AKMEQVPAQV 412
Query: 350 SSSRLERL 357
R + L
Sbjct: 413 KKQRTKDL 420
>ref|XP_165724.1| (XM_165724) hypothetical protein XP_165724 [Homo sapiens]
Length = 579
Score = 156 bits (395), Expect = 4e-37
Identities = 106/368 (28%), Positives = 185/368 (49%), Gaps = 24/368 (6%)
Query: 2 KVYIETMGCAMNSRDSEHLLSELSKLDYKETNDPKTADLILINTCSVREKPERKLFSEIG 61
K++I T GC+ N+ D E++ +L+ YK T + ADL L+N+C+V+ E + I
Sbjct: 65 KIWIRTWGCSHNNSDGEYMAGQLAAYGYKITENASDADLWLLNSCTVKNPAEDHFRNSI- 123
Query: 62 QFAKIKKPNAKIGVCGCTASHMGADILKKAPSVSFVLGARNVSKISQVIH---KEKAVEV 118
K ++ N KI + GC K S+ +G + + ++ +V+ K +V +
Sbjct: 124 --KKAQEENKKIVLAGCVPQAQPRQDYLKGLSI---IGVQQIDRVVEVVEETIKGHSVRL 178
Query: 119 AIDYDESAYAFEFFE------KKAQIRSLLNISIGCDKKCAYCIVPHTRGKEISIPMDLI 172
++ +K + +++I+ GC C YC H RG S P+D +
Sbjct: 179 LGQKKDNGRRLGGARLDLPKIRKNPLIEIISINTGCLNACTYCKTKHARGNLASYPIDEL 238
Query: 173 LKEAEKLANNGTKELMLLGQNVNNYGARFSSEHAKVDFSDLLDKLSEI---QGIERIRFT 229
+ A++ G E+ L ++ YG + + LL KL E+ + R+ T
Sbjct: 239 VDRAKQSFQEGVCEIWLTSEDTGAYGRDIGT-----NLPTLLWKLVEVIPEGAMLRLGMT 293
Query: 230 SPHPLHMNDGFLERFAKNPKVCKSIHMPLQSGSSAVLKMMRRGYSKEWFLNRVERLKALV 289
+P + + + + +P+V +H+P+QS S +VL M+R Y F V+ LK V
Sbjct: 294 NPPYILEHLEEMAKILNHPRVYAFLHIPVQSASDSVLMEMKREYCVADFKRVVDFLKEKV 353
Query: 290 PEVGISTDIIVGFPNESDKDFEDTMEVLEKVRFDTLYSFIYSPRPFTEAGAWKERVPLEV 349
P + I+TDII GFP E+D+DF++T++++E+ +F +L+ + PRP T A A E+VP +V
Sbjct: 354 PGITIATDIICGFPGETDQDFQETVKLVEEYKFPSLFINQFYPRPGTPA-AKMEQVPAQV 412
Query: 350 SSSRLERL 357
R + L
Sbjct: 413 KKQRTKDL 420
>ref|NP_282594.1| (NC_002163) hypothetical protein Cj1454c [Campylobacter jejuni]
pir||E81291 hypothetical protein Cj1454c [imported] - Campylobacter jejuni
(strain NCTC 11168)
emb|CAB73877.1| (AL139078) hypothetical protein Cj1454c [Campylobacter jejuni]
Length = 439
Score = 155 bits (393), Expect = 7e-37
Identities = 110/430 (25%), Positives = 208/430 (47%), Gaps = 30/430 (6%)
Query: 2 KVYIETMGCAMNSRDSEHLLSELSKLDYKETNDPKTADLILINTCSVREKPERKLFSEIG 61
K+Y+ ++GC N DSE +L LS Y+ ++P AD++++NTC + +++ + I
Sbjct: 3 KLYLMSLGCNKNLVDSEIMLGHLSA--YELCDEPSKADVLIVNTCGFIDSAKKESINAIL 60
Query: 62 QFAKIKKPNAKIGVCGCTASHMGADILKKAPSVSFVLGARNVSKISQVIHKEKAVEVAID 121
+ +K ++ + V GC +++K+ P V G + +I ++I K+ +
Sbjct: 61 DLHEQRKKDSLLVVTGCLMQRYREELMKELPEVDLFTGVGDYERIDEMILKKTNL----- 115
Query: 122 YDESAYAFEFFEKK----AQIRSLLNISIGCDKKCAYCIVPHTRGKEISIPMDLILKEAE 177
+ S Y K+ + + + I+ GC++KC++C +P +GK S + I+ E +
Sbjct: 116 FSNSTYLQSENSKRIITGSNSHAFIKIAEGCNQKCSFCAIPSFKGKLKSREISSIIAELK 175
Query: 178 KLANNGTKELMLLGQNVNNYGARFSSEHAKVDFSDLLDKLSEIQGIERIRFTSPHPLHMN 237
L G K+ + Q+ ++Y + K L+D++ +I+GI R +P +
Sbjct: 176 DLVARGYKDFSFIAQDTSSY---LFDKGEKDGLIRLIDEVEKIKGIRAARILYLYPTSAS 232
Query: 238 DGFLERFAKNPKVCKSIHMPLQSGSSAVLKMMRRGYSKEWFLNRVERLKALVPEVGISTD 297
+ ++R + MPLQ S +LK+M+RG + + +K+ P + T
Sbjct: 233 EALIKRIIASEIFINYFDMPLQHISDNMLKIMKRGANSTRLKEMLNLMKS-APNSFLRTG 291
Query: 298 IIVGFPNESDKDFEDTMEVLEKVRFDTLYSFIYSPRPFTEAGAWKERVPLEVSSSRLERL 357
IVG P ES+ DFE+ E ++ FD + F YS T A E+VP +V + RL+ +
Sbjct: 292 FIVGHPGESEADFEELCEFVKDFGFDRISVFAYSKEEDT-AAFDMEQVPFKVINKRLKII 350
Query: 358 QNRHKEILEEKAKLEVGKTHVVLVENRREMDNQIVGFEGRSDTGKFIEVTCKEKRNPGEL 417
+ E++E+ + EVG+ +V+ G+S G+F + K+ R E+
Sbjct: 351 EKIVDEVIEKSFEKEVGQKRLVVC-------------TGKSSEGEFF-IAAKDLRWDREI 396
Query: 418 VKVEIISHSK 427
+I+ S+
Sbjct: 397 DGEILINESE 406
>ref|NP_220797.1| (NC_000963) unknown [Rickettsia prowazekii]
sp|Q9ZDB6|Y416_RICPR Hypothetical protein RP416
pir||G71699 hypothetical protein RP416 - Rickettsia prowazekii
emb|CAA14873.1| (AJ235271) unknown [Rickettsia prowazekii]
Length = 421
Score = 155 bits (392), Expect = 9e-37
Identities = 120/430 (27%), Positives = 210/430 (47%), Gaps = 35/430 (8%)
Query: 5 IETMGCAMNSRDSEHLLS--ELSKLDYKETNDPKTADLILINTCSVREKPERKLFSEIGQ 62
I T GC +N +SE + ELS LD ++ + NTC+V + E++ I +
Sbjct: 14 IVTFGCRLNIYESEIIRKNLELSGLD----------NVAIFNTCAVTKSAEKQARQAIRK 63
Query: 63 FAKIKKPNAKIGVCGCTASHMGADILKKAPSVSFVLGARN--VSKISQVIHKEKAVEVAI 120
AK P+ KI V GC+A + V V+G +S Q+ ++ +V +
Sbjct: 64 -AKKNNPDLKIIVTGCSAQ-ANPKMYGNMSEVDKVIGNEEKLLSHYYQITDQKISVNDIM 121
Query: 121 DYDESA-YAFEFFEKKAQIRSLLNISIGCDKKCAYCIVPHTRGKEISIPMDLILKEAEKL 179
E+A + F+ K+ R+ + + GCD C +CI+P+ RGK SIP+ I+ + + L
Sbjct: 122 SVKETACHLVSSFDGKS--RAFIQVQNGCDHNCTFCIIPYVRGKSRSIPIGTIVAQVKHL 179
Query: 180 ANNGTKELMLLGQNVNNYGARFSSEHAKVDFSDLLDK-LSEIQGIERIRFTSPHPLHMND 238
G KE+++ G +V YG+ F+ ++ + L + ++R+R +S ++D
Sbjct: 180 VLKGFKEVVITGVDVTAYGSDLPGSPT---FAQMIKRVLKLVPELKRMRLSSIDIAEIDD 236
Query: 239 GFLERFAKNPKVCKSIHMPLQSGSSAVLKMMRRGYSKEWFLNRVERLKALVPEVGISTDI 298
E A + ++ H+ +QSG +LK M+R +++ + ++L+A+ PEV DI
Sbjct: 237 ELFELIAYSERIMPHFHISVQSGDDMILKRMKRRHNRASVIEFCQKLRAIRPEVSFGADI 296
Query: 299 IVGFPNESDKDFEDTMEVLEKVRFDTLYSFIYSPRPFTEAGAWKERVPLEVSSSRLERLQ 358
I GFP E+++ FE+T +++ + L+ F YS R T A A +VP + R + L+
Sbjct: 297 IAGFPTETNEMFENTRKLILEAELQYLHVFPYSEREGTPA-ARMPQVPQNIRKERAKILR 355
Query: 359 NRHKEILEEKAKLEVGKTHVVLVENRREMDNQIVGFEGRSDTGKFIEVTCKEKRNPGELV 418
L E K +G+ +L+EN N I + T FI V + G++
Sbjct: 356 QDGFNQLNEFFKRHIGQKVELLIEN-----NNI------AHTENFIPVKLDKYLAIGQIF 404
Query: 419 KVEIISHSKG 428
K E++ +G
Sbjct: 405 KAELVGIEEG 414
>ref|NP_285512.1| (NC_001264) conserved hypothetical protein [Deinococcus
radiodurans]
pir||E75615 conserved hypothetical protein - Deinococcus radiodurans (strain
R1)
gb|AAF12186.1|AE001862_12 (AE001862) conserved hypothetical protein [Deinococcus radiodurans]
Length = 504
Score = 155 bits (392), Expect = 9e-37
Identities = 113/406 (27%), Positives = 193/406 (46%), Gaps = 39/406 (9%)
Query: 7 TMGCAMNSRDSEHLLSELSKLDYKETNDPKTADLILINTCSVREKPERKLFSEIGQFAKI 66
++GC DSE +L++L Y+ + AD +++NTC + S IG+
Sbjct: 27 SLGCPKALVDSERILTQLRAEGYEVAPSYEGADAVIVNTCGFITPAVEESLSAIGEALDA 86
Query: 67 KKPNAKIGVCGCTASHMGADILKKAPSVSFVLGARNVSKISQVIHKEKAVE--------- 117
K+ V GC I+++ P V+ + G+ V + + + ++
Sbjct: 87 ---TGKVIVTGCLGERP-EKIMERHPKVAAITGSEAVDDVMGHVRELLPIDQGAFTGLLP 142
Query: 118 ---------VAIDYDESAYAFEFFEKKAQIR----SLLNISIGCDKKCAYCIVPHTRGKE 164
V E+ + F ++ + + ++ GC+ CA+CI+P RG +
Sbjct: 143 VAAPGMRAGVETPQRENTRHGDVFAPSVKLTPRHYAYVKVAEGCNHTCAFCIIPKLRGLQ 202
Query: 165 ISIPMDLILKEAEKLANNGTKELMLLGQNVNNYG-------ARFSSEHAKVDFSDLLDKL 217
+S +L EA +L GTKELM++ Q+ + YG + F E + +DL KL
Sbjct: 203 VSRDAGAVLYEAYRLIAGGTKELMIIAQDTSAYGVDLRYRESEFQGEQVRAHLTDLAVKL 262
Query: 218 SEIQGIERIRFTSPHPLHMNDGFLERFAKNPKVCKSIHMPLQSGSSAVLKMMRR-GYSKE 276
E+ R+ + P+P H+ D +E A+ KV + +PLQ S +LK+MRR G K+
Sbjct: 263 GEMGAWVRMHYVYPYP-HV-DRVVELMAQG-KVLPYLDIPLQHASPKILKLMRRPGAGKQ 319
Query: 277 WFLNRVERLKALVPEVGISTDIIVGFPNESDKDFEDTMEVLEKVRFDTLYSFIYSPRPFT 336
L+ + R + + PE+ I + IVGFP E+++DF++ ++ LE R D + +F YS
Sbjct: 320 --LDTIRRWREICPELVIRSTFIVGFPGETEEDFQELLQFLEDARLDRVGAFPYSDIEEA 377
Query: 337 EAGAWKERVPLEVSSSRLERLQNRHKEILEEKAKLEVGKTHVVLVE 382
+A A VP EV RL R + I EK +VG+ V+++
Sbjct: 378 DANALPGAVPEEVKQERLARFMEVAQRISTEKLSEKVGRVMDVIID 423
>ref|NP_634206.1| (NC_003901) hypothetical protein [Methanosarcina mazei Goe1]
gb|AAM31878.1| (AE013458) hypothetical protein [Methanosarcina mazei Goe1]
Length = 435
Score = 155 bits (392), Expect = 9e-37
Identities = 121/443 (27%), Positives = 220/443 (49%), Gaps = 31/443 (6%)
Query: 1 MKVYIETMGCAMNSRDSEHLLSELSKLDYK--ETNDPKTADLILINTCSVREKPERKLFS 58
MKVY+E+ GC+ + +E + + + KL ++ + A++ + N+C+V+ E+K+
Sbjct: 1 MKVYLESFGCSASQASAEIMKASIGKLGHELLSPENAGQAEVYICNSCTVKYTTEQKILY 60
Query: 59 EIGQFAKIKKPNAKIGVCGCTASHMGADILKKAPSVSFVLGARNVSKISQVI-----HKE 113
+I + ++ V GC DIL P + +LG VS++ ++ K+
Sbjct: 61 KIRSMGE---KGVQVIVSGCMPEVQLEDILHANPE-AHILGVNAVSRLGDLLSTIEQRKK 116
Query: 114 KAVEVAIDYDESAYAFEFFEKKAQIRSLLNISI-----GCDKKCAYCIVPHTRGKEISIP 168
+ + + F + RS NI I GC+ C+YCIV H RGK +S P
Sbjct: 117 TGIPGGERLEIRTSEPQGFLNVPRERSNPNIHICQISQGCNFACSYCIVKHARGKLLSFP 176
Query: 169 MDLILKEAEKLANNGTKELMLLGQNVNNYGARFSSEHAKVDFSDLLDKLSEIQGIERIRF 228
+ I+++ +G +E+ L Q+ + YG V +LL +SEI G ++R
Sbjct: 177 PEEIIEDIRSAVADGCREIWLTSQDDSQYGM-----DTGVKLPELLRAISEIPGDFKVRV 231
Query: 229 TSPHP---LHMNDGFLERFAKNPKVCKSIHMPLQSGSSAVLKMMRRGYSKEWFLNRVERL 285
+P L + D ++ F + K+ K +H+P+QS S +VLK M R + + + +
Sbjct: 232 GMMNPFSVLPILDDLVDAFDSD-KIFKLLHLPIQSASHSVLKKMNRLHKMDSVDEIITKF 290
Query: 286 KALVPEVGISTDIIVGFPNESDKDFEDTMEVLEKVRFDTLYSFIYSPRPFTEAGAWKERV 345
+A ++ + TDIIVGF +E+D+DFE+T+E ++K R + + YSPRP T+A +++ +
Sbjct: 291 RAHFEDLSLFTDIIVGFCDETDEDFEETIEWVKKYRPEKINISRYSPRPHTKAFSFR-NL 349
Query: 346 PLEVSSSRLERLQNRHKEILEEKAKLEVGKTHVVLVENRREMDNQIVGFEGRSDTGKFIE 405
+S R +L ++I E +G V V E+ + + R+D+ + +
Sbjct: 350 DSRISVKRSHQLHKVCEQIKIESKNEMIGWKGRVFVSKYTEIGDVLT----RTDSYRPVV 405
Query: 406 VTCKEKRNPGELVKVEIISHSKG 428
++ + R PGE +V+I G
Sbjct: 406 ISGSDLR-PGEYAEVKITGAKPG 427
>ref|NP_282156.1| (NC_002163) hypothetical proteinCj1006c [Campylobacter jejuni]
pir||C81376 hypothetical protein Cj1006c [imported] - Campylobacter jejuni
(strain NCTC 11168)
emb|CAB73262.1| (AL139076) hypothetical proteinCj1006c [Campylobacter jejuni]
Length = 416
Score = 155 bits (391), Expect = 1e-36
Identities = 114/392 (29%), Positives = 200/392 (50%), Gaps = 30/392 (7%)
Query: 2 KVYIETMGCAMNSRDSEHLLSELSKLDYKETNDPKTADLILINTCSVREKPERKLFSEIG 61
KV+ +T GC N D+E L S + DY+ ND A +I++N+C+V + + S +
Sbjct: 4 KVFFKTFGCRTNIYDTELLKSYVK--DYEIINDENKAQIIVVNSCTVTNGADSGIKSYVN 61
Query: 62 QFAKIKKPNAKIGVCGCTASHMGADILKKAPSVSFVLGARNVSKISQVIH-KEKAVEVA- 119
++K K+ + GC A G ++L K V VLGA N KI++ + K E+
Sbjct: 62 T---MQKKGIKVILTGCGAVSKGKELLDKK-QVFGVLGASNKDKINEFLGAKTSFYELGN 117
Query: 120 IDYDESAYAFEFFEKKAQIRSLLNISIGCDKKCAYCIVPHTRGKEISIPMDLILKEAEKL 179
+++ + E+ + ++ + I GCD C+YCI+P RGK S+ +LK+ E L
Sbjct: 118 LNFIDKDIVCEY---ENHTKAFVKIQEGCDFACSYCIIPSVRGKSRSVDEKALLKQVEIL 174
Query: 180 ANNGTKELMLLGQNVNNYGARFSSEHAKVDFSDLLDKLSEIQGIERIRFTSPHPLHMNDG 239
NG E++L G N+ +YG + + K LL K+ +I GI+RIR S P +++
Sbjct: 175 GANGYSEIVLTGTNIGSYGLKNGTTLGK-----LLQKMGQILGIKRIRLGSLEPAQLDES 229
Query: 240 FLERFAKNPKVCKSIHMPLQSGSSAVLKMMRRGYSKEWFLNRVERLKALVPE-VGISTDI 298
FLE + + +H+ LQ S +L++MRR + N ++ + + + TD
Sbjct: 230 FLE-ILDEAWLERHLHIALQHTSEKMLRIMRRRSHTD---NDLKLFNTIASKGYALGTDF 285
Query: 299 IVGFPNESDKDFEDTMEVLEKVRFDTLYSFIYSPRPFTEAGAWKERVPLEVSSSRLERLQ 358
IV P ES++ +++ + ++ +++FI+SPR T + K+ + ++ RL L+
Sbjct: 286 IVAHPGESEELWQEALRNFKEFPLTHIHAFIFSPRNNTHSATMKDVINGTLAKERLNTLK 345
Query: 359 NRHKEILEEKAKLEVGKTH----VVLVENRRE 386
+ + EK E K + VLVEN+++
Sbjct: 346 S-----IVEKNNYEFRKKNQVSLEVLVENQKD 372
>ref|NP_102288.1| (NC_002678) hypothetical protein [Mesorhizobium loti]
dbj|BAB48074.1| (AP002995) hypothetical protein [Mesorhizobium loti]
Length = 437
Score = 154 bits (388), Expect = 3e-36
Identities = 108/389 (27%), Positives = 185/389 (46%), Gaps = 17/389 (4%)
Query: 2 KVYIETMGCAMNSRDSEHLLSELSKLDYKETNDPKTADLILINTCSVREKPERKLFSEIG 61
+V ++GC DSE +++ L Y+ ADL+++NTC + + + IG
Sbjct: 5 RVSFVSLGCPKALVDSERIITRLRAEGYEIARKHDGADLVVVNTCGFLDSARDESLNAIG 64
Query: 62 QFAKIKKPNAKIGVCGCTASHMGADILKKAPSVSFVLGARNVSKISQVIHKEKAVEVAID 121
N ++ V GC + I +K P+V + G + + +H+ A + D
Sbjct: 65 SALS---ENGRVIVTGCLGAEPDV-IREKHPNVLAITGPQAYESVMAAVHE--AAPPSHD 118
Query: 122 YDESAYAFEFFEKKAQIRSLLNISIGCDKKCAYCIVPHTRGKEISIPMDLILKEAEKLAN 181
+ + + + L IS GC+ +C +CI+P RG +S P +L+EAEKLA
Sbjct: 119 PYIDLLPPQGVKLTPRHYAYLKISEGCNNRCTFCIIPALRGDLVSRPAADVLREAEKLAK 178
Query: 182 NGTKELMLLGQNVNNYG-------ARFSSEHAKVDFSDLLDKLSEIQGIERIRFTSPHPL 234
G KEL+++ Q+ + YG + F + F DL ++L ++ R+ + P+P
Sbjct: 179 AGVKELLVISQDTSAYGIDIKYQTSMFGDREVRAKFLDLSEELGKLGIWVRMHYVYPYP- 237
Query: 235 HMNDGFLERFAKNPKVCKSIHMPLQSGSSAVLKMMRRGYSKEWFLNRVERLKALVPEVGI 294
H+ D + K+ + +P Q S VLK MRR E L R+ + + P++ I
Sbjct: 238 HVAD--VIPLMAEGKILPYLDIPFQHASPQVLKNMRRPAHGEKTLERIRGWRDVCPDLAI 295
Query: 295 STDIIVGFPNESDKDFEDTMEVLEKVRFDTLYSFIYSP-RPFTEAGAWKERVPLEVSSSR 353
+ IVGFP E+D+DFE ++ L++ + D F Y P + E+VP +V +R
Sbjct: 296 RSTFIVGFPGETDEDFEMLLDWLDEAKIDRAGCFKYEPVKGARSNDLGLEQVPQDVKEAR 355
Query: 354 LERLQNRHKEILEEKAKLEVGKTHVVLVE 382
R R ++I + +VGK VL++
Sbjct: 356 WHRFMQRQQKISATQLAKKVGKRLPVLID 384
>ref|NP_422478.1| (NC_002696) conserved hypothetical protein [Caulobacter crescentus
CB15]
gb|AAK25646.1| (AE006026) conserved hypothetical protein [Caulobacter crescentus
CB15]
Length = 443
Score = 153 bits (387), Expect = 3e-36
Identities = 112/436 (25%), Positives = 208/436 (47%), Gaps = 35/436 (8%)
Query: 3 VYIETMGCAMNSRDSEHLLSELSKLDYKETNDPKTADLILINTCSVREKPERKLFSEIGQ 62
V + T GC +N+ +SE + + S +D ++ NTC+V + R+ I +
Sbjct: 33 VDVVTFGCRLNAYESEAMRARASA--------DGLSDAVVFNTCAVTNEAVRQARQAIRK 84
Query: 63 FAKIKKPNAKIGVCGCTASHMGADILKKAPSVSFVLGARNVSKISQVIHKEKAVEVAID- 121
A+ ++P A+I V GC A+ + P V VLG N K + + + V ++
Sbjct: 85 -ARRERPGARIIVTGC-AAQVDPAAFAAMPEVDLVLG--NAEKAAPGALTDTSTRVRVND 140
Query: 122 ----YDESAYAFEFFEKKAQIRSLLNISIGCDKKCAYCIVPHTRGKEISIPMDLILKEAE 177
+ + + + + +A R+ + + GCD +C +CI+P+ RG S P ++++
Sbjct: 141 IMSIKETAGHLIDGLKDRA--RAYVEVQNGCDHRCTFCIIPYGRGNSRSAPAGEVVEQVR 198
Query: 178 KLANNGTKELMLLGQNVNNYGARFSSEHAKVDFSDLLDK-LSEIQGIERIRFTSPHPLHM 236
KLA G +E++L G +V ++GA + L+ + L + + R+R +S +
Sbjct: 199 KLAAEGYREVVLTGVDVTSWGADLPGQPT---LGQLVGRILRMVPDLPRLRLSSIDAAEI 255
Query: 237 NDGFLERFAKNPKVCKSIHMPLQSGSSAVLKMMRRGYSKEWFLNRVERLKALVPEVGIST 296
+ + P++ +H+ LQ+G + +LK M+R +S+E L V ++ + P+
Sbjct: 256 DPDLFKLLETEPRLMPYLHLSLQAGDNLILKRMKRRHSREDALKLVAEVRRVRPDTAFGA 315
Query: 297 DIIVGFPNESDKDFEDTMEVLEKVRFDTLYSFIYSPRPFTEAGAWKERVPLEVSSSRLER 356
D+I GFP E+D+ FE+T++++E+ L+ F YS RP T A A V V R R
Sbjct: 316 DLIAGFPTETDEAFENTLKLVEEAGLAFLHVFPYSARPGTPA-ARMPPVKGPVIKDRARR 374
Query: 357 LQNRHKEILEEKAKLEVGKTHVVLVENRREMDNQIVGFEGRSDTGKFIEVTCKEKRNPGE 416
L+ + LE + +VG+ LVE +G + F E+ + G+
Sbjct: 375 LREAGQRGLERHLQRQVGRVLSGLVER-----------DGVARAEDFTEIAFAGEAPSGQ 423
Query: 417 LVKVEIISHSKGRLMA 432
++ + H R++A
Sbjct: 424 ILAFRVTGHDGSRVIA 439
>ref|NP_662284.1| (NC_002932) conserved hypothetical protein [Chlorobium tepidum TLS]
gb|AAM72626.1| (AE012897) conserved hypothetical protein [Chlorobium tepidum TLS]
Length = 434
Score = 153 bits (387), Expect = 3e-36
Identities = 99/390 (25%), Positives = 190/390 (48%), Gaps = 23/390 (5%)
Query: 3 VYIETMGCAMNSRDSEHLLSELSKLDYKETNDPKTADLILINTCS-VREKPERKLFSEIG 61
+++ ++GC+ N+ DSE L ++ T++ AD+ILINTC +++ + + +
Sbjct: 11 IFLLSLGCSKNTVDSERLTAQAVASGLTFTDNVDEADIILINTCGFIKDAKQESIDETLA 70
Query: 62 QFAKIKKPNAK-IGVCGCTASHMGADILKKAPSVSFVLGARNVSKISQVIHKEKAVEVAI 120
K ++ + + V GC ++ ++ P + + G R + ++ I +
Sbjct: 71 AIGKKEEGVVREVYVMGCLVELYRKELAEEMPEIDGLFGTRELPEVLAAIGAK------- 123
Query: 121 DYDESAYAFEFFEKKAQIR----SLLNISIGCDKKCAYCIVPHTRGKEISIPMDLILKEA 176
Y E F+++ + + L I+ GC+++C++C +P RG +S P++ +L+EA
Sbjct: 124 ------YREELFDRRELLTPPHYAFLKIAEGCNRRCSFCSIPKIRGPYVSQPIEQLLREA 177
Query: 177 EKLANNGTKELMLLGQNVNNYGARFSSEHAKVDFSDLLDKLSEIQGIERIRFTSPHPLHM 236
L G KEL L+ Q+++ YG + K +DL +LS++ G IR +PL+
Sbjct: 178 ALLQQQGVKELNLIAQDISVYGYDL---YGKSALNDLTLRLSDM-GFNWIRLLYAYPLNF 233
Query: 237 NDGFLERFAKNPKVCKSIHMPLQSGSSAVLKMMRRGYSKEWFLNRVERLKALVPEVGIST 296
+ + P VC I MPLQ + +LK M+RG ++ ++ ++ P++ + T
Sbjct: 234 PLEVISTMRERPNVCNYIDMPLQHINDRILKSMQRGIGRKATEQLIDDIRQKNPDIRLRT 293
Query: 297 DIIVGFPNESDKDFEDTMEVLEKVRFDTLYSFIYSPRPFTEAGAWKERVPLEVSSSRLER 356
+I G+P E+ +FE+ ++ + + RFD L F Y A A ++ V E R+
Sbjct: 294 TMIAGYPGETRAEFEELLDFIRQTRFDRLGCFPYRHEEHASAYALEDTVSDEEKEKRVGE 353
Query: 357 LQNRHKEILEEKAKLEVGKTHVVLVENRRE 386
L + I + G+T VL++ E
Sbjct: 354 LMELQEGISASLNRKLEGQTLKVLIDRIEE 383
>ref|NP_222991.1| (NC_000921) putative [Helicobacter pylori J99]
sp|Q9ZMF0|Y285_HELPJ Hypothetical protein JHP0270
pir||G71952 hypothetical protein jhp0270 - Helicobacter pylori (strain J99)
gb|AAD05851.1| (AE001464) putative [Helicobacter pylori J99]
Length = 418
Score = 153 bits (387), Expect = 3e-36
Identities = 117/396 (29%), Positives = 194/396 (48%), Gaps = 33/396 (8%)
Query: 2 KVYIETMGCAMNSRDSEHLLSELSKLDYKETNDPKTADLILINTCSVREKPERKLFSEIG 61
KVY +T GC N D++ + L D+ T + + AD+I+IN+C+V + + S
Sbjct: 3 KVYFKTFGCRTNLFDTQVMGENLK--DFSATLEEQEADIIIINSCTVTNGTDSAVRSYAR 60
Query: 62 QFAKIKKPNAKIGVCGCTASHMGADILKKAPSVSFVLGARNVSKISQVIHKEKAVEVAID 121
+ A++ K ++ GC G ++ +K + V G N KI+ ++ ++K + +
Sbjct: 61 KMARLDK---EVLFTGCGVKTQGKELFEKG-LLKGVFGHDNKEKINALLQEKKRFFIDDN 116
Query: 122 YD----ESAYAFEFFEKKAQIRSLLNISIGCDKKCAYCIVPHTRGKEISIPMDLILKEAE 177
+ ++ EF K R+ + I GCD C YCI+P RG+ S IL++
Sbjct: 117 LENKHLDTTMVSEFVGKT---RAFIKIQEGCDFDCNYCIIPSVRGRARSFEERKILEQVG 173
Query: 178 KLANNGTKELMLLGQNVNNYGARFSSEHAKVDFSDLLDKLSEIQGIERIRFTSPHPLHMN 237
L + G +E++L G NV +YG S A+ L+ KLS+I G++RIR S P +N
Sbjct: 174 LLCSKGVQEVVLTGTNVGSYGKDRGSNIAR-----LIKKLSQITGLKRIRIGSLEPNQIN 228
Query: 238 DGFLERFAKNPKVCKSIHMPLQSGSSAVLKMMRRGYSKEWFLNRVERLKALVPEV----- 292
D FLE + + K +H+ LQ +L+ M R NR + + L+ +
Sbjct: 229 DEFLE-LLEEDFLEKHLHIALQHSHDFMLERMNR-------RNRTKSDRELLEIIASKNF 280
Query: 293 GISTDIIVGFPNESDKDFEDTMEVLEKVRFDTLYSFIYSPRPFTEAGAWKERVPLEVSSS 352
I TD IVG P ES+ FE + LE + ++ FIYS R T + ++ V LE S
Sbjct: 281 AIGTDFIVGHPGESESVFEKAFKNLESLPLTHIHPFIYSKRKDTPSSLMRDSVSLEDSKK 340
Query: 353 RLERLQNR--HKEILEEKAKLEVGKTHVVLVENRRE 386
RL +++ HK + +L++ LVE +++
Sbjct: 341 RLNAIKDLIFHKNKAFRQLQLKLNTPLKALVEAQKD 376
>emb|CAA10332.1| (AJ131242) hypothetical protein [Wolinella succinogenes]
Length = 439
Score = 153 bits (386), Expect = 4e-36
Identities = 99/379 (26%), Positives = 190/379 (50%), Gaps = 17/379 (4%)
Query: 2 KVYIETMGCAMNSRDSEHLLSELSKLDYKETNDPKTADLILINTCSVREKPERKLFSEIG 61
K+++ ++GC N DSE +L L Y+ T + AD+I++NTC E +++ S +
Sbjct: 4 KLHLISLGCTKNLVDSEVMLGRLKS--YEITPLIEKADVIIVNTCGFIEAAKQESLSVLF 61
Query: 62 QFAKIKKPNAKIGVCGCTASHMGADILKKAPSVSFVLGARNVSKISQVIHKEKAV---EV 118
+ + +K A + GC + ++L++ P + + G + KI Q++ + + EV
Sbjct: 62 EALERRKKGAILVASGCLSERYHEELLREIPEIDIITGVGDYDKIDQMVRERQGFHSGEV 121
Query: 119 AIDYDESAYAFEFFEKKAQIRSLLNISIGCDKKCAYCIVPHTRGKEISIPMDLILKEAEK 178
+ +E E + + + + +S GC++ C++C +P +GK S ++ LKE +
Sbjct: 122 FLASEEQ----ERVITGSSVHAYVKLSEGCNQTCSFCAIPQFKGKLHSRTLESTLKEVKN 177
Query: 179 LANNGTKELMLLGQNVNNYGARFSSEHAKVDFSDLLDKLSEIQGIERIRFTSPHPLHMND 238
L G + + Q+ ++Y K L+ L ++GI+ R +P +
Sbjct: 178 LIAKGFTDFSFIAQDTSSY---LRDRGEKEGLIQLIGALDSLEGIKSARILYLYPSTASA 234
Query: 239 GFLERFAKNPKVCKSIHMPLQSGSSAVLKMMRRGYSKEWFLNRVERLKALVPEVGISTDI 298
++ K+ V MPLQ + ++LK M+RG +++ +ER++ VP + T +
Sbjct: 235 KLIQAIQKSQVVQNYFDMPLQHIAESMLKRMKRGANQKKHKELLERMRQ-VPHSFVRTTL 293
Query: 299 IVGFPNESDKDFEDTMEVLEKVRFDTLYSFIYSPRPFTEAGAWKERVPLEVSSSRLERL- 357
I+G P ES+++FE+ LE+ RFD + F YS T A + ++ V ++RL+RL
Sbjct: 294 ILGHPGESEEEFEELCRFLEEFRFDRVNLFAYSDEEGTSAHKMEGKLDKRVINARLKRLD 353
Query: 358 ---QNRHKEILEEKAKLEV 373
Q +H+ +L+E E+
Sbjct: 354 KIIQKQHRALLKEMVGQEI 372
>ref|NP_539050.1| (NC_003317) Fe-S OXIDOREDUCTASE [Brucella melitensis]
gb|AAL51314.1| (AE009456) Fe-S OXIDOREDUCTASE [Brucella melitensis]
Length = 447
Score = 153 bits (386), Expect = 4e-36
Identities = 113/442 (25%), Positives = 210/442 (46%), Gaps = 35/442 (7%)
Query: 1 MKVYIETMGCAMNSRDSEHLLSELSKLDYKETNDPKTADLILINTCSVREKPERKLFSEI 60
M V I T GC +N+ +SE + E D I+ NTC+V + R+ I
Sbjct: 21 MSVEIVTFGCRLNTYESEVMKREADAAGLGTLKD----GAIIFNTCAVTAEAVRQARQAI 76
Query: 61 GQFAKIKKPNAKIGVCGCTASHMGADILKKAPSVSFVLGARNVSKISQV----------I 110
+ A+ + P+A+I V GC A+ AD V VLG K +
Sbjct: 77 RK-ARRENPDARIIVTGC-AAQTEADNFAAMGEVDLVLGNEEKLKSNSYRMLPDFGVNQF 134
Query: 111 HKEKAVEVAIDYDESAYAFEFFEKKAQIRSLLNISIGCDKKCAYCIVPHTRGKEISIPMD 170
K + ++ + +++ + E +A R+ + + GCD +C +CI+P+ RG S+PM
Sbjct: 135 EKVRVNDIMEVRETASHMVDAIEGRA--RAFVQVQNGCDHRCTFCIIPYGRGNSRSVPMG 192
Query: 171 LILKEAEKLANNGTKELMLLGQNVNNYGARFSSEHAKVDFSDLLDK-LSEIQGIERIRFT 229
++ + ++L NG E++L G ++ +YG S + L+ L+++ ++R+R +
Sbjct: 193 AVVDQVKRLVGNGYAEVVLTGVDMTSYGPDLPSN---LRLGKLVKTVLAQVPDLQRLRLS 249
Query: 230 SPHPLHMNDGFLERFAKNPKVCKSIHMPLQSGSSAVLKMMRRGYSKEWFLNRVERLKALV 289
S + ++ +E A ++ +H+ LQ+G +LK M+R + ++ + + +AL
Sbjct: 250 SIDSIEADEDLMEAIASEKRLMPHLHLSLQAGDDMILKRMKRRHLRDDSIRFCQTARALR 309
Query: 290 PEVGISTDIIVGFPNESDKDFEDTMEVLEKVRFDTLYSFIYSPRPFTEAGAWKERVPLEV 349
P++ DII GFP E+++ F+++++++E+ L+ F YSPR T A A +V E+
Sbjct: 310 PDIVFGADIIAGFPTETEEMFQNSLKIVEECGLTHLHVFPYSPREGTPA-ARMPQVRREI 368
Query: 350 SSSRLERLQNRHKEILEEKAKLEVGKTHVVLVENRREMDNQIVGFEGRSDTGKFIEVTCK 409
R RL+ E+ G +LVE EG + T F +
Sbjct: 369 VKERAARLRAEGDRAYEKHLNALHGTRQRLLVEK-----------EGVARTEGF-TLAAV 416
Query: 410 EKRNPGELVKVEIISHSKGRLM 431
++ N GE+++ + H +L+
Sbjct: 417 DQGNAGEIIERIVTGHDGEKLL 438
>ref|NP_207083.1| (NC_000915) conserved hypothetical protein [Helicobacter pylori
26695]
sp|P56130|Y285_HELPY Hypothetical protein HP0285
pir||E64555 conserved hypothetical protein HP0285 - Helicobacter pylori
(strain 26695)
gb|AAD07353.1| (AE000547) conserved hypothetical protein [Helicobacter pylori
26695]
Length = 418
Score = 152 bits (385), Expect = 6e-36
Identities = 117/396 (29%), Positives = 192/396 (47%), Gaps = 33/396 (8%)
Query: 2 KVYIETMGCAMNSRDSEHLLSELSKLDYKETNDPKTADLILINTCSVREKPERKLFSEIG 61
KVY +T GC N D++ + L D+ T + + AD+I+IN+C+V + + S
Sbjct: 3 KVYFKTFGCRTNLFDTQVMSENLK--DFSTTLEEQEADIIIINSCTVTNGADSAVRSYAK 60
Query: 62 QFAKIKKPNAKIGVCGCTASHMGADILKKAPSVSFVLGARNVSKISQVIHKEKAVEVAID 121
+ A++ K ++ GC G ++ +K + V G N KI+ ++ ++K + +
Sbjct: 61 KMARLDK---EVLFTGCGVKTQGKELFEKG-FLKGVFGHDNKEKINALLQEKKRFFIDDN 116
Query: 122 YD----ESAYAFEFFEKKAQIRSLLNISIGCDKKCAYCIVPHTRGKEISIPMDLILKEAE 177
+ ++ EF K R+ + I GCD C YCI+P RG+ S IL++
Sbjct: 117 LENKHLDTTMVSEFVGKT---RAFIKIQEGCDFDCNYCIIPSVRGRARSFEERKILEQVG 173
Query: 178 KLANNGTKELMLLGQNVNNYGARFSSEHAKVDFSDLLDKLSEIQGIERIRFTSPHPLHMN 237
L + G +E++L G NV +YG S A+ L+ KLS+I G++RIR S P +N
Sbjct: 174 LLCSKGVQEVVLTGTNVGSYGKDRGSNIAR-----LIKKLSQIAGLKRIRIGSLEPNQIN 228
Query: 238 DGFLERFAKNPKVCKSIHMPLQSGSSAVLKMMRRGYSKEWFLNRVERLKALVPEV----- 292
D FLE + + K +H+ LQ +L+ M R NR + + L+ +
Sbjct: 229 DEFLE-LLEEDFLEKHLHIALQHSHDLMLERMNR-------RNRTKSDRELLETIASKNF 280
Query: 293 GISTDIIVGFPNESDKDFEDTMEVLEKVRFDTLYSFIYSPRPFTEAGAWKERVPLEVSSS 352
I TD IVG P ES FE + LE + ++ FIYS R T + + V LE S
Sbjct: 281 AIGTDFIVGHPGESGSVFEKAFKNLESLPLTHIHPFIYSKRKDTPSSLMTDSVSLEDSKK 340
Query: 353 RLERLQNR--HKEILEEKAKLEVGKTHVVLVENRRE 386
RL +++ HK + +L++ LVE +++
Sbjct: 341 RLNAIKDLIFHKNKAFRQLQLKLNTPLKALVEVQKD 376
>ref|NP_246510.1| (NC_002663) unknown [Pasteurella multocida]
sp|Q9CKN9|YF71_PASMU Hypothetical protein PM1571
gb|AAK03655.1| (AE006194) unknown [Pasteurella multocida]
Length = 446
Score = 152 bits (383), Expect = 1e-35
Identities = 108/387 (27%), Positives = 187/387 (47%), Gaps = 19/387 (4%)
Query: 7 TMGCAMNSRDSEHLLSELSKLDYKETNDPKTADLILINTCSVREKPERKLFSEIGQFAKI 66
++GC N DSE +L+EL Y + ADL+++NTC + ++ IG+ +
Sbjct: 12 SLGCPKNLVDSERILTELRSDGYNIIPSYENADLVIVNTCGFIDSAVQESLEAIGEALE- 70
Query: 67 KKPNAKIGVCGCTASHMGADILKKAPSVSFVLGARNVSKISQVIHKEKAVEVAIDYDESA 126
N K+ V GC + I + P V V G + + Q +HK Y +
Sbjct: 71 --ENGKVIVTGCLGAKEDR-IREVHPKVLEVTGPHSYEAVMQQVHKYVPKPAYNPY-VNL 126
Query: 127 YAFEFFEKKAQIRSLLNISIGCDKKCAYCIVPHTRGKEISIPMDLILKEAEKLANNGTKE 186
+ + + + L IS GCD +C +CI+P RG S + +L EA++L G KE
Sbjct: 127 VPKQGVKLTPKHYAYLKISEGCDHRCTFCIIPSMRGDLDSRSITQVLDEAKRLVEAGVKE 186
Query: 187 LMLLGQNVNNYGARFSSEHA-----------KVDFSDLLDKLSEIQGIERIRFTSPHPLH 235
++++ Q+ + Y S E K + L ++L ++ R+ + P+P H
Sbjct: 187 ILVVSQDTSAYALDRSKEEQNKTVFWNGMPIKNNLISLCEQLGKLGVWVRLHYVYPYP-H 245
Query: 236 MNDGFLERFAKNPKVCKSIHMPLQSGSSAVLKMMRRGYSKEWFLNRVERLKALVPEVGIS 295
+ D + A+ K+ + +PLQ S +LK M+R S E L R+++ + + P++ +
Sbjct: 246 V-DQLIPLMAEG-KILPYLDIPLQHASPKILKAMKRPGSIERTLERIKKWREICPDLTLR 303
Query: 296 TDIIVGFPNESDKDFEDTMEVLEKVRFDTLYSFIYSPRPFTEAGAWKERVPLEVSSSRLE 355
+ IVGFP ES++DF+ ++ L++ D + F +SP A ++VP EV +R
Sbjct: 304 STFIVGFPGESEEDFQLLLDFLKEALLDRVGCFKFSPVEGAIATEMPDQVPEEVKEARFH 363
Query: 356 RLQNRHKEILEEKAKLEVGKTHVVLVE 382
R +EI + + +VGK VLV+
Sbjct: 364 RFMQLQQEISAARLQQKVGKVFTVLVD 390
>ref|NP_105219.1| (NC_002678) hypothetical protein [Mesorhizobium loti]
dbj|BAB51005.1| (AP003003) hypothetical protein [Mesorhizobium loti]
Length = 446
Score = 151 bits (381), Expect = 2e-35
Identities = 112/441 (25%), Positives = 200/441 (44%), Gaps = 33/441 (7%)
Query: 2 KVYIETMGCAMNSRDSEHLLSELSKLDYKETNDPKTADLILINTCSVREKPERKLFSEIG 61
++ + T GC +N+ +SE + E ++ NTC+V + R+ I
Sbjct: 21 RIDVVTFGCRLNTYESEVMRREAESAGLGALQ----GGAVIFNTCAVTGEAVRQARQAIR 76
Query: 62 QFAKIKKPNAKIGVCGCTASHMGADILKKAPSVSFVLGARNVSKISQV----------IH 111
+ A+ P A+I V GC A+ + V VLG K +
Sbjct: 77 K-ARRDNPGARIIVTGC-AAQTEPEKFAAMDEVDLVLGNEEKLKANSYRALPDFGVNDTE 134
Query: 112 KEKAVEVAIDYDESAYAFEFFEKKAQIRSLLNISIGCDKKCAYCIVPHTRGKEISIPMDL 171
K + ++ + + + + E +A R+ + + GCD +C +CI+P+ RG S+PM
Sbjct: 135 KARVNDIFSVRETAGHMVDAIEGRA--RAFVQVQNGCDHRCTFCIIPYGRGNSRSVPMGA 192
Query: 172 ILKEAEKLANNGTKELMLLGQNVNNYGARFSSEHAKVDFSDLLDKLSEIQGIERIRFTSP 231
++++ ++LA NG E++L G ++ ++GA + L ++ ++R+R +S
Sbjct: 193 VVEQVKRLAGNGYAEIVLTGVDMTSFGADLPGAPKLGRLVKTI--LKQVPDVKRLRLSSI 250
Query: 232 HPLHMNDGFLERFAKNPKVCKSIHMPLQSGSSAVLKMMRRGYSKEWFLNRVERLKALVPE 291
+ +D L+ A P++ +H+ LQSG +LK M+R + ++ + E ++ L PE
Sbjct: 251 DSIEADDDLLDAIATEPRLMPHLHLSLQSGDDMILKRMKRRHLRDQSIRFCEDVRKLRPE 310
Query: 292 VGISTDIIVGFPNESDKDFEDTMEVLEKVRFDTLYSFIYSPRPFTEAGAWKERVPLEVSS 351
+ DII GFP E+D FE++++++E+ L+ F +SPR T A A +V EV
Sbjct: 311 IVFGADIIAGFPTETDAMFENSIKIVEECGLTHLHVFPFSPREGTPA-ARMPQVRREVVK 369
Query: 352 SRLERLQNRHKEILEEKAKLEVGKTHVVLVENRREMDNQIVGFEGRSDTGKFIEVTCKEK 411
R RL+ + G +L+E +G T F +
Sbjct: 370 QRAARLRAAGEAAYRRHLSSLPGTRQSILIER-----------DGLGRTEGF-TLAALGT 417
Query: 412 RNPGELVKVEIISHSKGRLMA 432
PGE+V+ I H RL A
Sbjct: 418 GAPGEIVEATITGHDGARLNA 438
>ref|NP_360217.1| (NC_003103) unknown [Rickettsia conorii]
gb|AAL03118.1| (AE008618) unknown [Rickettsia conorii]
Length = 421
Score = 150 bits (380), Expect = 2e-35
Identities = 116/426 (27%), Positives = 205/426 (47%), Gaps = 35/426 (8%)
Query: 5 IETMGCAMNSRDSEHLLS--ELSKLDYKETNDPKTADLILINTCSVREKPERKLFSEIGQ 62
+ T GC +N +SE + ELS +D ++ + NTC+V + E++ I +
Sbjct: 14 VVTFGCRLNIYESEIIRKNLELSGID----------NVAIFNTCAVTKAAEKQARQAIRR 63
Query: 63 FAKIKKPNAKIGVCGCTASHMGADILKKAPSVSFVLGARN--VSKISQVIHKEKAVEVAI 120
AK P+ KI V GC+A + P V V+G + Q+ + V +
Sbjct: 64 -AKKNNPDLKIIVTGCSAQ-TSPQMYGNMPEVDKVIGNEEKLLPNYYQITDAKITVNDIM 121
Query: 121 DYDESA-YAFEFFEKKAQIRSLLNISIGCDKKCAYCIVPHTRGKEISIPMDLILKEAEKL 179
E+A + F+ K+ R+ + + GCD C +CI+P+ RGK S+ + I ++ + L
Sbjct: 122 SVKETASHLVSSFDCKS--RAFIQVQNGCDHFCTFCIIPYGRGKSRSVAIGAIAEQVKHL 179
Query: 180 ANNGTKELMLLGQNVNNYGARFSSEHAKVDFSDLLDK-LSEIQGIERIRFTSPHPLHMND 238
NG KE++ G +V YG+ F+ ++ + L+ + ++R+R +S ++D
Sbjct: 180 VLNGFKEVVFTGVDVTAYGSDLPGSPT---FAQMIKRVLNLVPELKRLRLSSIDVAEIDD 236
Query: 239 GFLERFAKNPKVCKSIHMPLQSGSSAVLKMMRRGYSKEWFLNRVERLKALVPEVGISTDI 298
E A + ++ H+ LQ+G +LK M+R +++ + +L+A+ PEV DI
Sbjct: 237 ELFELIAYSERIMPHFHISLQAGDDMILKRMKRRHNRANVIEFCRKLRAIRPEVSFGADI 296
Query: 299 IVGFPNESDKDFEDTMEVLEKVRFDTLYSFIYSPRPFTEAGAWKERVPLEVSSSRLERLQ 358
I GFP E+ + FE+T +++ + L+ F YS R T A A +VP + R L+
Sbjct: 297 IAGFPTETPEMFENTRKLISEAELQYLHVFPYSEREGTPA-ARMPQVPKNIRKERAAILR 355
Query: 359 NRHKEILEEKAKLEVGKTHVVLVENRREMDNQIVGFEGRSDTGKFIEVTCKEKRNPGELV 418
+ L E K +G+ +LVEN N I + T FI V + G++
Sbjct: 356 QEGQNQLTEFFKKHIGQKVELLVEN-----NNI------AHTENFIPVKLDKPLEIGQIF 404
Query: 419 KVEIIS 424
K ++++
Sbjct: 405 KAKLVA 410
>ref|NP_223389.1| (NC_000921) putative [Helicobacter pylori J99]
pir||E71902 hypothetical protein jhp0671 - Helicobacter pylori (strain J99)
gb|AAD06255.1| (AE001499) putative [Helicobacter pylori J99]
Length = 439
Score = 150 bits (380), Expect = 2e-35
Identities = 110/382 (28%), Positives = 185/382 (47%), Gaps = 16/382 (4%)
Query: 7 TMGCAMNSRDSEHLLSELSKLDYKETNDPKTADLILINTCSVREKPERKLFSEIGQFAKI 66
++GC+ N DSE +L +L +Y TND K AD+ILINTC E +++ I AK
Sbjct: 13 SLGCSKNLVDSEVMLGKL--YNYTLTNDAKKADVILINTCGFIESAKQESIQTILNAAKD 70
Query: 67 KKPNAKIGVCGCTASHMGADILKKAPSVSFVLGARNVSKISQVIHKEKAVEVAIDYDESA 126
KK A + GC + +I + P V G + KI +I K++ + E
Sbjct: 71 KKEGAILIASGCLSERYKDEIKELIPEVDIFTGVGDYDKIDILIAKKQN-----QFSEQV 125
Query: 127 YAFEFFEKK----AQIRSLLNISIGCDKKCAYCIVPHTRGKEISIPMDLILKEAEKLANN 182
+ E + + + + + + IS GC++KC++C +P +GK S +D ILKE E LA
Sbjct: 126 FLSEHYNARIITGSSVHAYVKISEGCNQKCSFCAIPSFKGKLQSRELDSILKEVEDLALK 185
Query: 183 GTKELMLLGQNVNNYGARFSSEHAKVDFSDLLDKLSEIQGIERIRFTSPHPLHMNDGFLE 242
G K++ + Q+ +++ + K L+ + + Q ++ R +P +
Sbjct: 186 GYKDMTFIAQDSSSF---LYDKGQKDGLIQLIRAIDKQQALKSARILYLYPSSTTLELIG 242
Query: 243 RFAKNPKVCKSIHMPLQSGSSAVLKMMRRGYSKEWFLNRVERLKALVPEVGISTDIIVGF 302
+P MP+Q S ++LK MRR S+ L + +K V E I + IIVG
Sbjct: 243 AIEDSPIFQNYFDMPIQHISDSMLKKMRRNSSQAHHLKLLNAMKQ-VKESFIRSTIIVGH 301
Query: 303 PNESDKDFEDTMEVLEKVRFDTLYSFIYSPRPFTEAGAWKERVPLEVSSSRLERLQNRHK 362
P E++ +FE+ L++ RFD L F +S T A + E+VP ++ ++R++ L
Sbjct: 302 PEENESEFEELSAFLDEFRFDRLNIFAFSAEENTHAYS-LEKVPKKIINARIKALNKIAL 360
Query: 363 EILEEKAKLEVGKTHVVLVENR 384
+ K + K LVE++
Sbjct: 361 KHQNHSFKALLNKPIKALVEHK 382
>ref|NP_616094.1| (NC_003552) 2-methylthioadenine synthase [Methanosarcina
acetivorans str. C2A] [Methanosarcina acetivorans C2A]
gb|AAM04574.1| (AE010782) 2-methylthioadenine synthase [Methanosarcina acetivorans
str. C2A] [Methanosarcina acetivorans C2A]
Length = 435
Score = 150 bits (379), Expect = 3e-35
Identities = 118/443 (26%), Positives = 221/443 (49%), Gaps = 31/443 (6%)
Query: 1 MKVYIETMGCAMNSRDSEHLLSELSKLDYKETNDPKT--ADLILINTCSVREKPERKLFS 58
MKVY+E+ GC+ + +E + + + +L ++ N A++ + N+C+V+ E+K+
Sbjct: 1 MKVYLESFGCSASLASAEIMKASVERLGHELLNPAAAGEAEVYICNSCTVKYTTEQKILY 60
Query: 59 EIGQFAKIKKPNAKIGVCGCTASHMGADILKKAPSVSFVLGARNVSKISQVIH--KEKAV 116
+I + + ++ V GC +IL P + +LG +S++ +++ +++ +
Sbjct: 61 KI---RSMGEKGVQVIVSGCMPEVQLEEILHANPE-AHILGVNAISRLGELLSSIEQRRM 116
Query: 117 E-------VAIDYDESAYAFEFFEKKAQIR-SLLNISIGCDKKCAYCIVPHTRGKEISIP 168
E + + E +++ + IS GC+ C+YCIV H RGK S P
Sbjct: 117 EGLPAGGHLELRTSEPLGFLNVPRERSNPNIHICQISQGCNFACSYCIVKHARGKLRSFP 176
Query: 169 MDLILKEAEKLANNGTKELMLLGQNVNNYGARFSSEHAKVDFSDLLDKLSEIQGIERIRF 228
+ I+K+ +G +E+ L Q+ + YG V +LL +SEI G ++R
Sbjct: 177 PEKIVKDIRSAVADGCREIWLTSQDDSQYGM-----DTGVKLPELLRMISEIPGDFKVRV 231
Query: 229 TSPHP---LHMNDGFLERFAKNPKVCKSIHMPLQSGSSAVLKMMRRGYSKEWFLNRVERL 285
+P L + DG ++ F + KV K +H+P+QS S +VLK M R + + + +
Sbjct: 232 GMMNPFSVLPILDGLVDAF-DSDKVFKLLHLPIQSASHSVLKKMNRLHKMDAVDEIITKF 290
Query: 286 KALVPEVGISTDIIVGFPNESDKDFEDTMEVLEKVRFDTLYSFIYSPRPFTEAGAWKERV 345
+A ++ + TDIIVGF +E+D+DFE+T+E ++K R + + YSPRP T+A +++ +
Sbjct: 291 RARFEDLSLFTDIIVGFCDETDEDFEETIEWVKKYRPEKINISRYSPRPHTKAFSFR-NL 349
Query: 346 PLEVSSSRLERLQNRHKEILEEKAKLEVGKTHVVLVENRREMDNQIVGFEGRSDTGKFIE 405
+S R L ++I + +G V V E+ + + R+D + +
Sbjct: 350 DSRISVQRSHELHKVCEQIKLGSKQEMIGWKGRVFVSKYTEIGDVLT----RTDAYRPVV 405
Query: 406 VTCKEKRNPGELVKVEIISHSKG 428
++ + + PGE VEI G
Sbjct: 406 ISGSDLK-PGEYANVEITGAKPG 427
>ref|NP_387344.1| (NC_003047) CONSERVED HYPOTHETICAL PROTEIN [Sinorhizobium meliloti]
emb|CAC47817.1| (AL591793) CONSERVED HYPOTHETICAL PROTEIN [Sinorhizobium meliloti]
Length = 424
Score = 150 bits (379), Expect = 3e-35
Identities = 104/391 (26%), Positives = 187/391 (47%), Gaps = 27/391 (6%)
Query: 3 VYIETMGCAMNSRDSEHLLSELSKLDYKETNDPKTADLILINTCSVREKPERKLFSEIGQ 62
V + T GC +N+ +SE + +E K +L+NTC+V + R+ I +
Sbjct: 4 VEVITFGCRLNTYESEVMRAEAEKAGLNNA--------VLVNTCAVTAEAVRQARQAIRR 55
Query: 63 FAKIKKPNAKIGVCGCTASHMGADILKKAPSVSFVLGARNVSKISQVIHKEKAVEVAIDY 122
A+ + P+A+I V GC A+ + + V VLG N K++ V ++ + +
Sbjct: 56 -ARRENPHARIIVTGC-AAQTEKETFAEMAEVDAVLG--NEEKLASVSYRSLP-DFGVSA 110
Query: 123 DESAYAFEFFEKKA-----------QIRSLLNISIGCDKKCAYCIVPHTRGKEISIPMDL 171
+E + +A +R+ + + GCD +C +CI+P+ RG S+PM
Sbjct: 111 EEKLRVNDIMSVRATAPQMVKHIDGHVRAFIQVQNGCDHRCTFCIIPYGRGNSRSVPMGA 170
Query: 172 ILKEAEKLANNGTKELMLLGQNVNNYGARFSSEHAKVDFSDLLDKLSEIQGIERIRFTSP 231
++ +A +LA +G +E++L G + +YGA + L L ++ I R+R +S
Sbjct: 171 VVDQARRLAESGYREIVLTGVDATSYGADLPGTPTLGLLAKTL--LKQVPEILRLRLSSI 228
Query: 232 HPLHMNDGFLERFAKNPKVCKSIHMPLQSGSSAVLKMMRRGYSKEWFLNRVERLKALVPE 291
+ + L+ A+ P+ +H+ LQ G +LK M+R +S + ++ L P
Sbjct: 229 DSIEADGHLLDLIAEEPRFMPHLHLSLQHGDDLILKRMKRRHSSADARAFCDEVRRLRPG 288
Query: 292 VGISTDIIVGFPNESDKDFEDTMEVLEKVRFDTLYSFIYSPRPFTEAGAWKERVPLEVSS 351
+ + D+I GFP E++ FE+ M + E L+ F YSPRP T A A ++ +
Sbjct: 289 ISLGADMIAGFPTETEPMFENAMRLAEDCGIAHLHVFPYSPRPGTPA-ARMPQLDRALVK 347
Query: 352 SRLERLQNRHKEILEEKAKLEVGKTHVVLVE 382
R RL+ + E+ + +G + +LVE
Sbjct: 348 ERAARLRAKGAELHAGHLEGMIGSSQTILVE 378
>ref|NP_207528.1| (NC_000915) conserved hypothetical protein [Helicobacter pylori
26695]
pir||F64611 conserved hypothetical protein HP0734 - Helicobacter pylori
(strain 26695)
gb|AAD07780.1| (AE000586) conserved hypothetical protein [Helicobacter pylori
26695]
Length = 439
Score = 150 bits (378), Expect = 4e-35
Identities = 109/382 (28%), Positives = 185/382 (47%), Gaps = 16/382 (4%)
Query: 7 TMGCAMNSRDSEHLLSELSKLDYKETNDPKTADLILINTCSVREKPERKLFSEIGQFAKI 66
++GC+ N DSE +L +L +Y TND K+AD+ILINTC E +++ I AK
Sbjct: 13 SLGCSKNLVDSEVMLGKL--YNYTLTNDAKSADVILINTCGFIESAKQESIQTILNAAKD 70
Query: 67 KKPNAKIGVCGCTASHMGADILKKAPSVSFVLGARNVSKISQVIHKEKAVEVAIDYDESA 126
KK A + GC + +I + P V G + KI +I K++ + E
Sbjct: 71 KKEGAILIASGCLSERYKDEIKELIPEVDIFTGVGDYDKIDIMIAKKQN-----QFSEQV 125
Query: 127 YAFEFFEKK----AQIRSLLNISIGCDKKCAYCIVPHTRGKEISIPMDLILKEAEKLANN 182
+ E + + + + + + IS GC++KC++C +P +GK S +D ILKE E LA
Sbjct: 126 FLSEHYNARIITGSSVHAYVKISEGCNQKCSFCAIPSFKGKLQSRELDSILKEVENLALK 185
Query: 183 GTKELMLLGQNVNNYGARFSSEHAKVDFSDLLDKLSEIQGIERIRFTSPHPLHMNDGFLE 242
G ++ + Q+ +++ + K L+ + + Q ++ R +P +
Sbjct: 186 GYTDMTFIAQDSSSF---LYDKGQKDGLIQLIRAIDKQQALKSARILYLYPSSTTLELIG 242
Query: 243 RFAKNPKVCKSIHMPLQSGSSAVLKMMRRGYSKEWFLNRVERLKALVPEVGISTDIIVGF 302
+P MP+Q S ++LK MRR S+ L ++ +K V E I + IIVG
Sbjct: 243 AIESSPIFQNYFDMPIQHISDSMLKKMRRNSSQAHHLKLLDAMKQ-VKESFIRSTIIVGH 301
Query: 303 PNESDKDFEDTMEVLEKVRFDTLYSFIYSPRPFTEAGAWKERVPLEVSSSRLERLQNRHK 362
P E++ +FE+ L++ +FD L F +S T A + E+VP + ++R++ L
Sbjct: 302 PEENESEFEELSAFLDEFQFDRLNIFAFSAEENTHAYS-LEKVPKKTINARIKALNKIAL 360
Query: 363 EILEEKAKLEVGKTHVVLVENR 384
+ K + K LVEN+
Sbjct: 361 KHQNHSFKALLNKPIKALVENK 382
>ref|NP_533359.1| (NC_003304) conserved hypothetical protein [Agrobacterium
tumefaciens str. C58 (U. Washington)]
gb|AAL43675.1| (AE009215) conserved hypothetical protein [Agrobacterium
tumefaciens str. C58 (U. Washington)]
Length = 424
Score = 147 bits (372), Expect = 2e-34
Identities = 111/435 (25%), Positives = 196/435 (44%), Gaps = 39/435 (8%)
Query: 3 VYIETMGCAMNSRDSEHLLSELSKLDYKETNDPKTADLILINTCSVREKPERKLFSEIGQ 62
V + T GC +N+ +SE + +E K +L+NTC+V + R+ I +
Sbjct: 4 VEVITFGCRLNTYESEVMRAEAEKAGLNNA--------VLVNTCAVTGEAVRQARQAIRR 55
Query: 63 FAKIKKPNAKIGVCGCTASHMGADILKKAPSVSFVLGARNVSKISQVIHKEKAVEVAIDY 122
A+ P+A+I V GC A+ P V VLG N K+ ++ + +
Sbjct: 56 -ARRDNPHARIIVTGC-AAQTEKQTFADMPEVDAVLG--NEEKLKSASYRALP-DFGVSA 110
Query: 123 DESAYAFEFFEKKA-----------QIRSLLNISIGCDKKCAYCIVPHTRGKEISIPMDL 171
+E + KA +R+ + + GCD +C +CI+P+ RG S+PM
Sbjct: 111 EEKLRVNDIMSIKATAPQMVKHIDGHVRAFIQVQNGCDHRCTFCIIPYGRGNSRSVPMGA 170
Query: 172 ILKEAEKLANNGTKELMLLGQNVNNYGARFSSEHAKVDFSDLLDKLSEIQGIERIRFTSP 231
++ +A +L +G E++L G + +YGA E + + L L ++ I R+R +S
Sbjct: 171 VVDQARRLTESGYCEIVLTGVDATSYGADLPGEPSLGYLAKTL--LKQVPDIIRLRLSSI 228
Query: 232 HPLHMNDGFLERFAKNPKVCKSIHMPLQSGSSAVLKMMRRGYSKEWFLNRVERLKALVPE 291
+ + ++ A P+ +H+ LQ G +LK M+R + + + +++L P+
Sbjct: 229 DSIEADHHLMDLIADEPRFMPHLHLSLQHGDDMILKRMKRRHLRADAIRFCNEVRSLRPD 288
Query: 292 VGISTDIIVGFPNESDKDFEDTMEVLEKVRFDTLYSFIYSPRPFTEAGAWKERVPLEVSS 351
+ D+I GFP E+++ E+ + E+ +L+ F YSPR T A ++ +
Sbjct: 289 IAFGADMIAGFPTETEEMLENAATLAEECGISSLHVFPYSPREGTPA-VRMPQLDRALVK 347
Query: 352 SRLERLQNRHKEILEEKAKLEVGKTHVVLVENRREMDNQIVGFEGRSDTGKFIEVTCKEK 411
R RL+ R + + + + VG VLVEN G + T F V +
Sbjct: 348 ERAGRLRARGEALKQAHLQNMVGSVQTVLVEN-----------SGFAHTDNFTLVAAPDL 396
Query: 412 RNPGELVKVEIISHS 426
P L +V I H+
Sbjct: 397 A-PRTLAQVAITGHN 410
>ref|NP_611207.1| (NM_137363) CG6550 gene product [Drosophila melanogaster]
gb|AAF57870.1| (AE003803) CG6550-PA [Drosophila melanogaster]
gb|AAK93058.1| (AY051634) GH28477p [Drosophila melanogaster]
Length = 552
Score = 147 bits (372), Expect = 2e-34
Identities = 123/439 (28%), Positives = 216/439 (49%), Gaps = 32/439 (7%)
Query: 2 KVYIETMGCAMNSRDSEHLLSELSKLDYKETNDPKTADLILINTCSVREKPERKLFSEIG 61
KV+++T GCA N+ DSE++ +L+ Y+ + + ADL L+N+C+V+ E +EI
Sbjct: 72 KVFVKTWGCAHNNSDSEYMAGQLAAYGYR-LSGKEEADLWLLNSCTVKNPSEDTFRNEIE 130
Query: 62 QFAKIKKPNAKIGVCGCTASHMGADILKKAPSVSFVLGARNVSKISQVIHKE-KAVEVAI 120
+ K + V GC GA +S V+G + + ++ +V+ + K V +
Sbjct: 131 SGMRNGK---HVVVAGCVPQ--GAPKSDYLNGLS-VIGVQQIDRVVEVVEETLKGHSVQL 184
Query: 121 DYDESAYAFEFFE---------KKAQIRSLLNISIGCDKKCAYCIVPHTRGKEISIPMDL 171
++ +K + +++I+ GC +C YC H RG S P +
Sbjct: 185 LQNKKKVHGRRVAGAPLSLPKVRKNPLIEIISINSGCLNQCTYCKTKHARGDLASYPPEE 244
Query: 172 ILKEAEKLANNGTKELMLLGQNVNNYGARFSSEHAKVDFSDLLDKLSEI---QGIERIRF 228
+++ A + G E+ L ++ YG S +LL +L E+ + R+
Sbjct: 245 VVERARQSFAEGCCEIWLTSEDTGAYGRDIGSS-----LPELLWQLVEVIPEHCMLRVGM 299
Query: 229 TSPHPLHMNDGFLERFAKNPKVCKSIHMPLQSGSSAVLKMMRRGYSKEWFLNRVERLKAL 288
T+P + + + ++P+V +H+P+QSGS +VL M+R Y ++ F + V+ L+
Sbjct: 300 TNPPYILEHLEEVANVLQHPRVYSFLHVPVQSGSDSVLGEMKREYCRQDFEHVVDFLRER 359
Query: 289 VPEVGISTDIIVGFPNESDKDFEDTMEVLEKVRFDTLYSFIYSPRPFTEAGAWKERVPLE 348
VP V I+TDII GFP E++ DFE+TM + K RF +L+ + PRP T A A +R+P
Sbjct: 360 VPGVTIATDIICGFPTETEDDFEETMTLCAKYRFPSLFINQFFPRPGTPA-AKMDRIPAN 418
Query: 349 VSSSRLERLQNRHKEILEEKAKLEVGKTHVVLVENRREMDNQIVGFEGRSDTGKFIEVTC 408
+ R +RL + E VG+ + VLV E+ + + + G + + + + +
Sbjct: 419 LVKKRTKRLTDLFYSY--EPYADRVGEIYTVLV---TEVSHDKLHYVGHNKSYEQVLLPM 473
Query: 409 KEKRNPGELVKVEIISHSK 427
++ G V V I S SK
Sbjct: 474 RDNL-LGTRVHVRITSASK 491
>ref|NP_355629.1| (NC_003062) AGR_C_4885p [Agrobacterium tumefaciens] [Agrobacterium
tumefaciens str. C58 (Cereon)]
gb|AAK88414.1| (AE008182) AGR_C_4885p [Agrobacterium tumefaciens str. C58
(Cereon)]
Length = 448
Score = 147 bits (372), Expect = 2e-34
Identities = 111/435 (25%), Positives = 196/435 (44%), Gaps = 39/435 (8%)
Query: 3 VYIETMGCAMNSRDSEHLLSELSKLDYKETNDPKTADLILINTCSVREKPERKLFSEIGQ 62
V + T GC +N+ +SE + +E K +L+NTC+V + R+ I +
Sbjct: 28 VEVITFGCRLNTYESEVMRAEAEKAGLNNA--------VLVNTCAVTGEAVRQARQAIRR 79
Query: 63 FAKIKKPNAKIGVCGCTASHMGADILKKAPSVSFVLGARNVSKISQVIHKEKAVEVAIDY 122
A+ P+A+I V GC A+ P V VLG N K+ ++ + +
Sbjct: 80 -ARRDNPHARIIVTGC-AAQTEKQTFADMPEVDAVLG--NEEKLKSASYRALP-DFGVSA 134
Query: 123 DESAYAFEFFEKKA-----------QIRSLLNISIGCDKKCAYCIVPHTRGKEISIPMDL 171
+E + KA +R+ + + GCD +C +CI+P+ RG S+PM
Sbjct: 135 EEKLRVNDIMSIKATAPQMVKHIDGHVRAFIQVQNGCDHRCTFCIIPYGRGNSRSVPMGA 194
Query: 172 ILKEAEKLANNGTKELMLLGQNVNNYGARFSSEHAKVDFSDLLDKLSEIQGIERIRFTSP 231
++ +A +L +G E++L G + +YGA E + + L L ++ I R+R +S
Sbjct: 195 VVDQARRLTESGYCEIVLTGVDATSYGADLPGEPSLGYLAKTL--LKQVPDIIRLRLSSI 252
Query: 232 HPLHMNDGFLERFAKNPKVCKSIHMPLQSGSSAVLKMMRRGYSKEWFLNRVERLKALVPE 291
+ + ++ A P+ +H+ LQ G +LK M+R + + + +++L P+
Sbjct: 253 DSIEADHHLMDLIADEPRFMPHLHLSLQHGDDMILKRMKRRHLRADAIRFCNEVRSLRPD 312
Query: 292 VGISTDIIVGFPNESDKDFEDTMEVLEKVRFDTLYSFIYSPRPFTEAGAWKERVPLEVSS 351
+ D+I GFP E+++ E+ + E+ +L+ F YSPR T A ++ +
Sbjct: 313 IAFGADMIAGFPTETEEMLENAATLAEECGISSLHVFPYSPREGTPA-VRMPQLDRALVK 371
Query: 352 SRLERLQNRHKEILEEKAKLEVGKTHVVLVENRREMDNQIVGFEGRSDTGKFIEVTCKEK 411
R RL+ R + + + + VG VLVEN G + T F V +
Sbjct: 372 ERAGRLRARGEALKQAHLQNMVGSVQTVLVEN-----------SGFAHTDNFTLVAAPDL 420
Query: 412 RNPGELVKVEIISHS 426
P L +V I H+
Sbjct: 421 A-PRTLAQVAITGHN 434
>ref|NP_614364.1| (NC_003551) 2-methylthioadenine synthetase [Methanopyrus kandleri
AV19]
gb|AAM02294.1| (AE010397) 2-methylthioadenine synthetase [Methanopyrus kandleri
AV19]
Length = 423
Score = 147 bits (371), Expect = 2e-34
Identities = 116/436 (26%), Positives = 199/436 (45%), Gaps = 22/436 (5%)
Query: 2 KVYIETMGCAMNSRDSEHLLSELSKLDYKETNDPKTADLILINTCSVREKPERKLFSEIG 61
KV +E GCA N D + L + ++ D + AD+ ++ TC VR+ + ++ + +
Sbjct: 3 KVAVEVYGCAANHDDGRLVRELLRREGFEVVEDAENADVAVLLTCIVRDSVDARMVNRMR 62
Query: 62 QFAKIKKPNAKIGVCGCTASHMGADILKKAPSVSFVLGARNVSKISQVIH---KEKAVEV 118
+ ++ V GC K P + V G R++ +I + + + VE
Sbjct: 63 ELERVPTV-----VAGCFPEAYPERARKLRPDAALV-GPRHLDRIPEAVRAVLRGDRVEF 116
Query: 119 AIDYDESAYAFEFFEKKAQIRSLLNISIGCDKKCAYCIVPHTRGKEISIPMDLILKEAEK 178
+ ++ + + + + +++ I+ GC +CAYC V RG S P + IL+ ++
Sbjct: 117 LGEREDIDWKADAPRELPNLAAIVPIAEGCPNRCAYCAVKLARGNLRSFPPERILRRVKR 176
Query: 179 LANNGTKELMLLGQNVNNYGARFSSEHAKVDFSDLLDKLSEIQGIERIRFTSP-HPLHMN 237
G E+ L Q+ YG + ++ D++D S R+ +P H ++
Sbjct: 177 ELERGAVEIHLTAQDTATYGLDRGTNVVEL-LEDVVDLCSRYGARVRLGMFNPGHAYPIS 235
Query: 238 DGFLERFAKNPKVC-KSIHMPLQSGSSAVLKMMRRGYSKEWFLNRVERLKALVPEVGIST 296
D + FA V +SIHMP+QSG VL+ M R Y+ E L + + T
Sbjct: 236 DDLADLFASRDDVLYRSIHMPVQSGDDEVLRRMNRNYTVEEALEVYRAFERRLGYFSFIT 295
Query: 297 DIIVGFPNESDKDFEDTMEVLEKVRFDTLYSFIYSPRPFTEAGAWKERVPLEVSSSRLER 356
D+IVGFP E+++ F +T+ LE+ R L++ + RP T A +++VP +V R
Sbjct: 296 DVIVGFPGETEEAFRNTLRFLERTRPHILHASRFCRRPGTPAARMEDQVPEDVKLRRSRI 355
Query: 357 LQNRHKEILEEKAKLEVGKTHVVLVENRREMDNQIVGFEGRSDTGKFIEVTCKEKRNPGE 416
L + E EE + +G+T VE M+ GR + K V E PGE
Sbjct: 356 LHRKRLEWAEEANRELIGET----VEVTMVMEKW-----GRDEHAK-KTVFRGEVPEPGE 405
Query: 417 LVKVEIISHSKGRLMA 432
++ I+ S RL+A
Sbjct: 406 RLECRIVDASHARLVA 421
>ref|NP_541681.1| (NC_003318) Fe-S OXIDOREDUCTASE [Brucella melitensis]
gb|AAL53945.1| (AE009705) Fe-S OXIDOREDUCTASE [Brucella melitensis]
Length = 437
Score = 147 bits (371), Expect = 2e-34
Identities = 111/432 (25%), Positives = 204/432 (46%), Gaps = 23/432 (5%)
Query: 2 KVYIETMGCAMNSRDSEHLLSELSKLDYKETNDPKTADLILINTCSVREKPERKLFSEIG 61
+V ++GC DSE +++ L Y+ + ADL+++NTC + + IG
Sbjct: 5 RVSFVSLGCPKALVDSERIITGLRSEGYEISRKHDGADLVIVNTCGFLDSARDESLEAIG 64
Query: 62 QFAKIKKPNAKIGVCGCTASHMGADILKKAPSVSFVLGARNVSKISQVIHKEKAVEVAID 121
N K+ V GC + I ++ P+V + G + + +H+ A D
Sbjct: 65 LALN---ENGKVIVTGCLGAEPDV-IRERHPNVLAITGPQAYESVMNAVHE--VAPPAHD 118
Query: 122 YDESAYAFEFFEKKAQIRSLLNISIGCDKKCAYCIVPHTRGKEISIPMDLILKEAEKLAN 181
+ + + + L IS GC +C++CI+P RG +S P++ +L+EAEKL
Sbjct: 119 PFVDLVPPQGVKLTPRHYAYLKISEGCSNRCSFCIIPALRGDLVSRPINEVLREAEKLVQ 178
Query: 182 NGTKELMLLGQNVNNYG-------ARFSSEHAKVDFSDLLDKLSEIQGIERIRFTSPHPL 234
G KE++++ Q+ + YG A + + F DL +L E+ R+ + P+P
Sbjct: 179 AGVKEILVISQDTSAYGLDIKYQEAMWQDRTVRTKFLDLSRELGEMGVWVRMHYVYPYP- 237
Query: 235 HMNDGFLERFAKNPKVCKSIHMPLQSGSSAVLKMMRRGYSKEWFLNRVERLKALVPEVGI 294
H+ D + A+ K+ + +P Q S AVLK MRR +E R++ + P++ +
Sbjct: 238 HV-DEVIPLMAEG-KILPYLDIPFQHASPAVLKNMRRPAHQEKTSRRIQAWRETCPDLAV 295
Query: 295 STDIIVGFPNESDKDFEDTMEVLEKVRFDTLYSFIYSPRPFTEAG-AWKERVPLEVSSSR 353
+ IVG+P E+++DF+ ++ L++ + + F Y +A E+VP EV +R
Sbjct: 296 RSTFIVGYPGETEEDFQMLLDWLDEAKIERAGCFKYEAVKGAKANDLGLEQVPEEVKEAR 355
Query: 354 LERLQNRHKEILEEKAKLEVGKTHVVLVENRREMDNQIVGFEGRSDTGKF---IEVTCKE 410
R + ++I K +VGK V+++ E + I R D + + ++ +
Sbjct: 356 WHRFMAKQQQISTNLLKKKVGKRLPVIID---EANGTIGKGRTRYDAPEIDGSVHISSRR 412
Query: 411 KRNPGELVKVEI 422
G++V V+I
Sbjct: 413 PLRVGDIVTVKI 424
>ref|NP_111857.1| (NC_002689) 2-methylthioadenine synthetase [Thermoplasma volcanium]
dbj|BAB60504.1| (AP000996) hypothetical protein [Thermoplasma volcanium]
Length = 401
Score = 146 bits (368), Expect = 5e-34
Identities = 117/428 (27%), Positives = 200/428 (46%), Gaps = 47/428 (10%)
Query: 1 MKVYIETMGCAMNSRDSEHLLSELSKLDYKETNDPKTADLILINTCSVREKPERKLFSEI 60
MK+Y E GC +N ++ +++L ++PK ADL +I TC+V +K E + + I
Sbjct: 1 MKIYFEAYGCTLNQGETALYVNKLLNEGNTLVSNPKEADLSIIGTCAVIKKTEDHMMARI 60
Query: 61 GQFAKIKKPNAKIGVCGCTASHMGADILKKAPSVSFVLGARNVSKISQVIHKEKAVEVAI 120
++ K+ V GC A G +++ NVS I + + ++ + I
Sbjct: 61 QNLSRF----GKVEVIGCLAPVKGKTMVED-----------NVSVIEK--DRFRSFQEVI 103
Query: 121 DYDESAYAFEFFEKKAQIRSLLNISIGCDKKCAYCIVPHTRGKEISIPMDLILKEAEKLA 180
D E A+I S + I+ GC KC +C+ RGK +S + I + + L
Sbjct: 104 D--------EVSPVNAEIVSGIPINQGCTGKCNFCVSHIARGKLVSRKPEKIAGQIKILL 155
Query: 181 NNGTKELMLLGQNVNNYGARFSSEHAKVDFSDLLDKLSEIQGIERIRFTSPHP---LHMN 237
G KE+ + + YG + L+ ++EI R+R P L +
Sbjct: 156 QRGIKEIKITSLDTAAYGKDIG-----LRLPHLIRTITEIGDDFRLRVGMMEPKNTLEIV 210
Query: 238 DGFLERFAKNPKVCKSIHMPLQSGSSAVLKMMRRGYSKEWFLNRVERLKALVPEVGISTD 297
D + + ++ KV K +H+P+QSG VL++M R Y+ F+ + + P+ +STD
Sbjct: 211 DDLISAY-RSEKVFKFLHLPVQSGDDYVLEVMNREYTVSDFIRITGKFREAFPDSTLSTD 269
Query: 298 IIVGFPNESDKDFEDTMEVLEKVRFDTLYSFIYSPRPFTEAGAWKERVPLEVSSSRLERL 357
+I+G+ E+D FE T++++EK+R + + +SPR T A K P + + +
Sbjct: 270 LIIGYYAENDDSFEKTVQLIEKIRPEIINVTKFSPRELT-ADFEKRPKPTNILKEQDRMI 328
Query: 358 QNRHKEILEEKAKLEVGKTHVVLVENRREMDNQIVGFEGRSDTGK---FIEVTCKEKRNP 414
+ HKEIL+EK +GKT VL+ +GRS G+ + + +K
Sbjct: 329 ADMHKEILQEKFSNLIGKTEFVLITENG---------KGRSMIGRDHAYRPIVIMDKTRK 379
Query: 415 GELVKVEI 422
E +VEI
Sbjct: 380 FEFHQVEI 387
>ref|NP_070075.1| (NC_000917) conserved hypothetical protein [Archaeoglobus fulgidus]
sp|O29021|YC47_ARCFU Hypothetical protein AF1247
pir||F69405 conserved hypothetical protein AF1247 - Archaeoglobus fulgidus
gb|AAB89997.1| (AE001018) conserved hypothetical protein [Archaeoglobus fulgidus]
Length = 405
Score = 145 bits (367), Expect = 7e-34
Identities = 115/396 (29%), Positives = 196/396 (49%), Gaps = 28/396 (7%)
Query: 31 ETNDPKTADLILINTCSVREKPERKLFSEIGQFAKIKKPNAKIGVCGCTASHMGADILKK 90
E + + A++++IN+C V + ERK+ I + +K+ K+ + GC I K+
Sbjct: 10 ELSSVEDAEVVIINSCGVIDFTERKI---IRRMLDLKREGKKVVLAGCLTR-----ISKE 61
Query: 91 APSVS-FVLGARNVSKISQVIHKEKAVEVAIDYDESAYAFEFFEKKAQIR----SLLNIS 145
A SV+ L N+ + ++ EF K ++R ++++IS
Sbjct: 62 ALSVADSALSPDNLDMVVDAVYSALNGRKLFTERRFIDKAEFSHLKCRLRENAIAIVSIS 121
Query: 146 IGCDKKCAYCIVPHTRGKEISIPMDLILKEAEKLANNGTKELMLLGQNVNNYGARFSSEH 205
GC KC++C RG+ S MD I++EAE+ G +E+ L Q+ YG +
Sbjct: 122 EGCLGKCSFCATKFARGRLRSFSMDAIVREAERAVRAGYREIQLTSQDTGAYGM----DK 177
Query: 206 AKVDFSDLLDKLSEIQGIERIRFTSPHPLH---MNDGFLERFAKNPKVCKSIHMPLQSGS 262
+ +LL K+SEI+G R+R +P H M D + ++ K+ K +H+P+QSG
Sbjct: 178 GRAMLPELLRKISEIEGEFRVRVGMMNPQHAVRMLDELINAYSSE-KIYKFLHIPVQSGD 236
Query: 263 SAVLKMMRRGYSKEWFLNRVERLKALVPEVGISTDIIVGFPNESDKDFEDTMEVLEKVRF 322
+ +L+ M+R ++ E ++ VE + +V ISTDIIVGFP E+++ F + E++++ R
Sbjct: 237 NRILEDMKRNHTVEDYVEVVEAFRNSFDDVLISTDIIVGFPTETEEAFWKSYELIKETRP 296
Query: 323 DTLYSFIYSPRPFTEAGAWKERVPLEVSSSRLERLQNRHKEILEEKAKLEVGKTHVVLV- 381
D + YS R T A ++ +P + R +L + ++I E K VGK VLV
Sbjct: 297 DIVNITRYSARKGTPAARLRD-IPGWIKKERSRKLTDLMRKIGLENNKRFVGKKLRVLVT 355
Query: 382 ---ENRREMD--NQIVGFEGRSDTGKFIEVTCKEKR 412
+N R + N G+F+EV K+ R
Sbjct: 356 KEGKNGRNLARMNSYRAVVTEGAVGEFVEVKIKDCR 391
>ref|NP_560369.1| (NC_003364) conserved hypothetical protein [Pyrobaculum aerophilum]
gb|AAL64551.1| (AE009902) conserved hypothetical protein [Pyrobaculum aerophilum]
Length = 416
Score = 144 bits (364), Expect = 2e-33
Identities = 114/399 (28%), Positives = 194/399 (48%), Gaps = 36/399 (9%)
Query: 2 KVYIETMGCAMNSRDSEHLLSELSKLDYKETNDPKTADLILINTCSVREKPERKLFSEIG 61
KVY+ET GC + D+E L +L + ++ + +D++LI TC+VRE E + + I
Sbjct: 3 KVYVETYGCWLAKADAEILRQ---RLGLELASNVEESDVVLIYTCAVREDGEVRQLARIR 59
Query: 62 QFAKIKKPNAKIGVCGCTASHMGADILKKAPSVSFVLGARNVSKISQVIHKEKAVEVAID 121
AK + ++ V GC A I AP + + Q + E+ I
Sbjct: 60 DLAKSGR---EMIVAGCLARLRPYTIKSLAPGAALIY--------PQQVEGGPEREMKI- 107
Query: 122 YDESAYAFEFFEKKAQIRSLLNISIGCDKKCAYCIVPHTRGKE---ISIPMDLILKEAEK 178
E + + + +GC C +C +TRG S + ++++ +K
Sbjct: 108 ---------LPEFSGGVVYTVPLQVGCLGNCTFCATKYTRGGAGYVKSADPEEVVRKVKK 158
Query: 179 LANNGTKELMLLGQNVNNYGARFSSEHAKVDFSDLLDK-LSEIQGIERIRFTSPHPLHMN 237
G +E+ L GQ+V YG + + DLL++ L E+ G RIR P
Sbjct: 159 AVAMGAREIYLTGQDVITYGFEMRWKRGW-NLPDLLERILKEVDGEYRIRIGMSEPWVFE 217
Query: 238 ---DGFLERFAKNPKVCKSIHMPLQSGSSAVLKMMRRGYSKEWFLNRVERLKALVPEVG- 293
D L+ ++ +V + H+P+QSGS VL++M R Y+ + + V +++ ++ E
Sbjct: 218 KFADQILDVVKRDRRVYRYFHLPVQSGSDKVLRVMGRKYTVDEYRELVRKIRRVLGETTF 277
Query: 294 ISTDIIVGFPNESDKDFEDTMEVLEKVRFDTLYSFIYSPRPFTEAGAWKERVPLEVSSSR 353
I+TDIIVGFP E ++DF T+++ E+++FD ++ +SPRPFTEA ++VP R
Sbjct: 278 IATDIIVGFPGEEEEDFWATVKLAEELQFDKIHVARFSPRPFTEAAVMPKQVPDVEKKRR 337
Query: 354 LERLQNRHKEILEEKAKLEVGKTHVVLVENRREMDNQIV 392
+ L +I + L VG VL++ E+D+ +V
Sbjct: 338 SKALSEISLKIAHVRNGLRVGTKDEVLID---EIDHGLV 373
>ref|NP_148004.1| (NC_000854) hypothetical protein [Aeropyrum pernix]
pir||C72634 hypothetical protein APE1530 - Aeropyrum pernix (strain K1)
dbj|BAA80529.1| (AP000061) 456aa long hypothetical protein [Aeropyrum pernix]
Length = 456
Score = 144 bits (362), Expect = 3e-33
Identities = 114/405 (28%), Positives = 193/405 (47%), Gaps = 32/405 (7%)
Query: 4 YIETMGCAMNSRDSEHLLSELSKLDYKETNDPKTADLILINTCSVREKPERKLFSEIGQF 63
Y+E GC+++ D+ + S L + Y+ P+ AD+IL+NTC+VR E+++ + +
Sbjct: 27 YLEVYGCSLSEFDALIMASRLEEAGYRRVARPEDADVILVNTCAVRLDTEQRIAERLEKL 86
Query: 64 AKIKKPNAKIGVCGCTASHMGADILKKAPSVSFVLGARNVSKISQVIHKEKAVEVAIDYD 123
+++ P+ K V GC + + P S +L + V ++ A+D
Sbjct: 87 -RLQLPDRKYVVAGCLVKARPGLVARLVPEAS-LLAPQAVERVLD----------AVDAL 134
Query: 124 ESAYAFEFFEKKAQIRSLLNISI-----------GCDKKCAYCIVPHTRGKEISIPMDLI 172
ES + + RS+ + I GC C++CI R + S +I
Sbjct: 135 ESGRRLVVLDGRRDTRSMPQLPITDAVVTVMIQEGCLGDCSFCITKVARRQVRSYSPRVI 194
Query: 173 LKEAEKLANNGTKELMLLGQNVNNYGARFSSEHAKVDFSDLLDKLSE-IQGIERIRFTSP 231
++ + G +E+ L G +V YG K + +DL+ + E ++G RIR
Sbjct: 195 VERVREAVEKGAREIRLTGTDVAVYGVDLPG---KPNLADLVAAILEKVEGDYRIRVGMM 251
Query: 232 HPLHMN---DGFLERFAKNPKVCKSIHMPLQSGSSAVLKMMRRGYSKEWFLNRVERLKAL 288
P + D L+ + ++ +V K H+P+QSG VLK+M+R Y+ + R+K+
Sbjct: 252 TPDQVEPYLDSLLDVY-RDERVYKYFHLPVQSGDDEVLKIMKRNYTVSEYKAIHRRIKSR 310
Query: 289 VPEVGISTDIIVGFPNESDKDFEDTMEVLEKVRFDTLYSFIYSPRPFTEAGAWKERVPLE 348
P+ I+TDIIVG P E+ + F +T+ ++E++RF+ ++ YS RP TEA A E+VP
Sbjct: 311 FPDAMIATDIIVGHPGETWEAFWNTVRLVEELRFEKVHLAQYSLRPHTEA-ASMEQVPDS 369
Query: 349 VSSSRLERLQNRHKEILEEKAKLEVGKTHVVLVENRREMDNQIVG 393
V R L EI E VG+ LV R + + G
Sbjct: 370 VKKERSRILGKIVAEIGLEINGSYVGRRVRALVTERSWREGSMTG 414
>gb|AAH01215.1|AAH01215 (BC001215) Similar to CGI-05 protein [Homo sapiens]
Length = 510
Score = 141 bits (356), Expect = 1e-32
Identities = 118/431 (27%), Positives = 197/431 (45%), Gaps = 66/431 (15%)
Query: 2 KVYIETMGCAMNSRDSEHLLSELSKLDYKETNDPKTADLILINTCSVREKPERKLFSEIG 61
KVY+ET GC MN D+E S L K Y T++ + AD+IL+ TCS+REK E+ +++ +
Sbjct: 101 KVYLETYGCQMNVNDTEIAWSILQKSGYLRTSNLQEADVILLVTCSIREKAEQTIWNRLH 160
Query: 62 QFAKIK--KPNAK----IGVCGCTASHMGADILKKAPSVSFVLGARNVSKISQVIHKEKA 115
Q +K +P ++ IG+ GC A + +IL ++EK
Sbjct: 161 QLKALKTRRPRSRVPLRIGILGCMAERLKEEIL----------------------NREKM 198
Query: 116 VEVAIDYDESAYAFEFFEKKAQIRSLLNISIGCDKKCAYCIVPHTRGKEISIPMDLILKE 175
V++ D + + N+ + D+ A D++ +
Sbjct: 199 VDILAGPDAYRDLPQLLAVAESGQQAANVLLSLDETYA----------------DVMPVQ 242
Query: 176 AEKLANNGTKELMLLGQNVNNYGARFSSEHAKVDFSDLLDKLSEIQGI-ERIRFTSPHPL 234
A + +M N+ +Y V F+ ++ I I E ++
Sbjct: 243 TSASATSAFVSIMRGCDNMCSY--------CIVPFTRGRERSRPIASILEEVK------- 287
Query: 235 HMNDGFLERFAKNPKVCKSIHMPLQSGSSAVLKMMRRGYSKEWFLNRVERLKALVPEVGI 294
+++ L+ + +CK IH+P QSGSS VL+ MRRGYS+E ++ V ++ +P V +
Sbjct: 288 KLSEQVLQLIHERDNICKQIHLPAQSGSSRVLEAMRRGYSREAYVELVHHIRESIPGVSL 347
Query: 295 STDIIVGFPNESDKDFEDTMEVLEKVRFDTLYSFIYSPRPFTEA-GAWKERVPLEVSSSR 353
S+D I GF E+++D T+ +L +V+++ + F YS R T A K+ VP EV R
Sbjct: 348 SSDFIAGFCGETEEDHVQTVSLLREVQYNMGFLFAYSMRQKTRAYHRLKDDVPEEVKLRR 407
Query: 354 LERLQNRHKEILEEKAKLEVGKTHVVLVENRREMDNQIVGFEGRSDTGK---FIEVTCKE 410
LE L +E + + VG T +VLVE + GR+D F + ++
Sbjct: 408 LEELITIFREEATKANQTSVGCTQLVLVEGLSK--RSATDLCGRNDGNLKVIFPDAEMED 465
Query: 411 KRNPGELVKVE 421
NPG V+ +
Sbjct: 466 VNNPGLRVRAQ 476
>ref|NP_519757.1| (NC_003295) CONSERVED HYPOTHETICAL PROTEIN [Ralstonia solanacearum]
emb|CAD15338.1| (AL646065) CONSERVED HYPOTHETICAL PROTEIN [Ralstonia solanacearum]
Length = 453
Score = 140 bits (353), Expect = 3e-32
Identities = 106/398 (26%), Positives = 187/398 (46%), Gaps = 27/398 (6%)
Query: 2 KVYIETMGCAMNSRDSEHLLSELSKLDYKETNDPKTADLILINTCSVREKPERKLFSEIG 61
KV ++GC DSE ++++L Y+ + ADL+++NTC ++ ++ IG
Sbjct: 10 KVGFVSLGCPKALVDSEQIITQLRAEGYEISGTYGGADLVVVNTCGFIDEAVQESLDAIG 69
Query: 62 QFAKIKKPNAKIGVCGCTASHM---GADILKKA-PSVSFVLGARNVSKISQVIHKE--KA 115
+ N K+ V GC + G DI+ P V V G + ++ + +H K
Sbjct: 70 EALA---ENGKVIVTGCLGAKKDAAGQDIITSVHPKVLAVTGPHALGEVMEAVHTHLPKP 126
Query: 116 VEVAIDYDESAYAFEFFEKKAQIRSLLNISIGCDKKCAYCIVPHTRGKEISIPMDLILKE 175
+ ID + + + + L IS GC+ +C++CI+P RG +S P+ ++ E
Sbjct: 127 HDPFIDLVPP----QGIKLTPKHYAYLKISEGCNHRCSFCIIPSMRGDLVSRPVAEVMLE 182
Query: 176 AEKLANNGTKELMLLGQNVNNYGAR-------FSSEHAKVDFSDLLDKLSEIQGIE---- 224
AE L G KEL+++ Q+ + YG ++ K ++L+ L E+
Sbjct: 183 AENLLKAGVKELLVISQDTSAYGVDVKFRTGFWNGRPLKTRMTELVGALGELAAQYGAWV 242
Query: 225 RIRFTSPHPLHMNDGFLERFAKNPKVCKSIHMPLQSGSSAVLKMMRRGYSKEWFLNRVER 284
R+ + P+P D + A+ KV + +PLQ VLK M+R + E L+R+
Sbjct: 243 RLHYVYPYP--SVDEVMPLMAEG-KVLPYLDVPLQHAHPEVLKRMKRPANAEKTLDRIRA 299
Query: 285 LKALVPEVGISTDIIVGFPNESDKDFEDTMEVLEKVRFDTLYSFIYSPRPFTEAGAWKER 344
+ + PE+ I + I GFP E++++F+ ++ + + D + F YSP A
Sbjct: 300 WREVCPELTIRSTFIAGFPGETEEEFQTLLDFIAEAELDRVGCFAYSPVEGATANDLPGA 359
Query: 345 VPLEVSSSRLERLQNRHKEILEEKAKLEVGKTHVVLVE 382
+P EV R R + + + + +VGKT VLV+
Sbjct: 360 LPDEVREERRARFMEVAERVSARRLQRKVGKTLRVLVD 397
>ref|NP_280583.1| (NC_002607) Vng1861c [Halobacterium sp. NRC-1]
gb|AAG20063.1| (AE005086) Vng1861c [Halobacterium sp. NRC-1]
Length = 432
Score = 139 bits (351), Expect = 5e-32
Identities = 116/437 (26%), Positives = 198/437 (44%), Gaps = 45/437 (10%)
Query: 2 KVYIETMGCAMNSRDSEHLLSELSKLDYKETNDPKTADLILINTCSVREKPERKLFSEIG 61
+ +IET GC N +S + L + + AD+ ++NTC+V EK ER +
Sbjct: 3 RYHIETYGCTSNRGESRDIERRLRDAGHHKVETAADADVAILNTCTVVEKTERNMLRRAK 62
Query: 62 QFAKIKKPNAKIGVCGCTASHMGADILKKAPSVSFVLGARNVSKISQVIHKEKAVEVAID 121
+ A A + V GC A G + +QV+H + E +
Sbjct: 63 ELAD---ETADLIVTGCMALAQGEAFA-------------DADVDAQVLHWDDVPEAVTN 106
Query: 122 YDESAYAFEFFEKKAQIRSLLNISIGCDKKCAYCIVPHTRGKEISIPMDLILKEAEKLAN 181
+ + + +L I+ GC C+YCI G+ S P++ +++A L +
Sbjct: 107 GECPTTTPDAEPILDGVVGILPIARGCMSNCSYCITKQATGRVDSPPVEENVEKARALVH 166
Query: 182 NGTKELMLLGQNVNNYGARFSSEHAKVDFSDLLDKLS-EIQGIERIR--FTSPHPLH-MN 237
G KE+ + GQ+ YG + + +LL++++ EI+G R+R +P +H +
Sbjct: 167 AGAKEIRITGQDTGVYGW----DTGERKLPELLERIATEIEGEFRVRVGMANPGGVHGIR 222
Query: 238 DGFLERFAKNPKVCKSIHMPLQSGSSAVLKMMRRGYSKEWFLNRVERLKALVPEVGISTD 297
+ FA++ ++ +H P+QSGS VL MRR + + + VE + E +STD
Sbjct: 223 EELAAVFAEHDEIYNFLHAPVQSGSDDVLADMRRQHEVSQYRDIVETFNDTLGEWTLSTD 282
Query: 298 IIVGFPNESDKDFEDTMEVLEKVRFDTLYSFIYSPRPFTEAGAWKERVPLEVSSSRLERL 357
IVGFP E D D E +M++L + R + + +S RP T+A E+ +
Sbjct: 283 FIVGFPTEDDDDHEASMDLLRETRPEKINVTRFSKRPGTDAA--------ELKGLGGQTK 334
Query: 358 QNRHKEILEEKAKLEVGKTHVVLVENRREMDNQIVGFEGRSDTGK---------FIEVTC 408
++R K + E K + VG+ H +V RR++ +V EG D+ K ++
Sbjct: 335 KDRSKAMTELKMDV-VGEAHESMVGTRRDV---LVVEEGTGDSVKCYDGAYRQVIVQNAT 390
Query: 409 KEKRNPGELVKVEIISH 425
PG+ VE+ SH
Sbjct: 391 DHGLEPGDFATVEVTSH 407
>dbj|BAB96555.1| (AB085816) putative fructokinase-like protein [Pseudomonas putida]
Length = 536
Score = 139 bits (351), Expect = 5e-32
Identities = 106/401 (26%), Positives = 183/401 (45%), Gaps = 29/401 (7%)
Query: 2 KVYIETMGCAMNSRDSEHLLSELSKLDYKETNDPKTADLILINTCSVREKPERKLFSEIG 61
KV ++GC DSE ++++L Y+ + ADL+++NTC ++ ++ IG
Sbjct: 89 KVGFVSLGCPKALVDSEQIITQLRAEGYEISGTYDGADLVVVNTCGFIDEAVQESLDAIG 148
Query: 62 QFAKIKKPNAKIGVCGCTASHMGAD----ILKKAPSVSFVLGARNVSKISQVIHKE--KA 115
+ N K+ V GC + A I + P V V G +++ +H K
Sbjct: 149 EALN---ENGKVIVTGCLGAKKSASGTGLIEEVHPKVLAVTGPHATNEVMNAVHAHLPKP 205
Query: 116 VEVAIDYDESAYAFEFFEKKAQIRSLLNISIGCDKKCAYCIVPHTRGKEISIPMDLILKE 175
+ D +A + + + L IS GC+ +C +CI+P RG +S P+ ++ E
Sbjct: 206 HDPFTDLVPAAG----IKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPVADVMLE 261
Query: 176 AEKLANNGTKELMLLGQNVNNYGAR-------FSSEHAKVDFSDLLDKLSEIQGIE---- 224
AE L +G KEL+++ Q+ + YG ++ + K +DL+ L E+
Sbjct: 262 AENLFKSGVKELLVISQDTSAYGVDVKYRTGFWNGKPVKTRMTDLVGALGELAAQYGAWV 321
Query: 225 RIRFTSPHPLHMNDGFLERFAKNP---KVCKSIHMPLQSGSSAVLKMMRRGYSKEWFLNR 281
R+ + P+P D + A+ V + +P Q VLK M+R + E L R
Sbjct: 322 RLHYVYPYP--SVDEVIPMMAEGALKGHVLPYLDVPFQHAHPEVLKRMKRPANAEKVLER 379
Query: 282 VERLKALVPEVGISTDIIVGFPNESDKDFEDTMEVLEKVRFDTLYSFIYSPRPFTEAGAW 341
V+ + + P++ I + I GFP E+++ FE ++ + D + F YSP A
Sbjct: 380 VQAWRKICPDLTIRSTFIAGFPGETEEQFETLLDFIRVADLDRVGCFAYSPVEGASANEL 439
Query: 342 KERVPLEVSSSRLERLQNRHKEILEEKAKLEVGKTHVVLVE 382
+P EV R R +E+ + K ++GKT VLV+
Sbjct: 440 DGALPDEVREERRARFMELAEELSAARMKRKIGKTLKVLVD 480
>gb|AAC38321.2| (AF026544) unknown [Ralstonia eutropha]
Length = 505
Score = 136 bits (342), Expect = 6e-31
Identities = 103/398 (25%), Positives = 186/398 (45%), Gaps = 27/398 (6%)
Query: 2 KVYIETMGCAMNSRDSEHLLSELSKLDYKETNDPKTADLILINTCSVREKPERKLFSEIG 61
+V ++GC DSE ++++L Y + ADL+++NTC ++ ++ IG
Sbjct: 62 RVGFVSLGCPKALVDSEQIITQLRAEGYAISGTYDGADLVVVNTCGFIDEAVQESLDAIG 121
Query: 62 QFAKIKKPNAKIGVCGCTASHM---GADILKKA-PSVSFVLGARNVSKISQVIHKE--KA 115
+ N K+ V GC + G DI+ P V V G + ++ Q +H K
Sbjct: 122 EALT---ENGKVIVTGCLGAKKDAAGHDIVSSVHPKVLAVTGPHALGEVMQAVHTHLPKP 178
Query: 116 VEVAIDYDESAYAFEFFEKKAQIRSLLNISIGCDKKCAYCIVPHTRGKEISIPMDLILKE 175
+ D +A + + + L IS GC+ +C++CI+P RG +S P+ ++ E
Sbjct: 179 HDPFTDLVPAAG----IKLTPKHYAYLKISEGCNHRCSFCIIPSMRGDLVSRPVAEVMLE 234
Query: 176 AEKLANNGTKELMLLGQNVNNYGAR-------FSSEHAKVDFSDLLDKLSEIQGIE---- 224
AE L G KEL+++ Q+ + YG ++ K ++L+ L E+
Sbjct: 235 AENLFKAGVKELLVISQDTSAYGVDVKYRTGFWNGRPLKTRMTELVAALGELAAQYGAWV 294
Query: 225 RIRFTSPHPLHMNDGFLERFAKNPKVCKSIHMPLQSGSSAVLKMMRRGYSKEWFLNRVER 284
R+ + P+P H+++ + V + +PLQ VLK M+R + E ++R+
Sbjct: 295 RLHYVYPYP-HVDE--IIPLMSQGHVLPYLDVPLQHAHPDVLKRMKRPANAEKTMDRIRA 351
Query: 285 LKALVPEVGISTDIIVGFPNESDKDFEDTMEVLEKVRFDTLYSFIYSPRPFTEAGAWKER 344
+ + PE+ I + I GFP E++ +F+ ++ + + D + F YSP A
Sbjct: 352 WREICPELTIRSTFIAGFPGETEAEFQTLLDFIAEAELDRVGCFAYSPVEGATANDLPGA 411
Query: 345 VPLEVSSSRLERLQNRHKEILEEKAKLEVGKTHVVLVE 382
+P EV R R +E+ + + +VG+T VLV+
Sbjct: 412 LPDEVREERRARFMEVAEEVSARRLQRKVGQTLRVLVD 449
>dbj|BAB26688.1| (AK010081) data source:SPTR, source key:Q9JLH6,
evidence:ISS~homolog to CDK5 ACTIVATOR-BINDING
PROTEIN~putative [Mus musculus]
Length = 351
Score = 132 bits (333), Expect = 6e-30
Identities = 78/207 (37%), Positives = 119/207 (56%), Gaps = 11/207 (5%)
Query: 2 KVYIETMGCAMNSRDSEHLLSELSKLDYKETNDPKTADLILINTCSVREKPERKLFSEIG 61
KVY+ET GC MN D+E S L K Y T++ + AD+IL+ TCS+REK E+ +++ +
Sbjct: 100 KVYLETYGCQMNVNDTEIAWSILQKSGYLRTSNLQEADVILLVTCSIREKAEQTIWNRLH 159
Query: 62 QFA--KIKKPNAK----IGVCGCTASHMGADILKKAPSVSFVLGA---RNVSKISQVIHK 112
Q K K+P ++ IG+ GC A + +IL + V + G R++ ++ V+
Sbjct: 160 QLKVLKTKRPRSRVPLRIGILGCMAERLKGEILNREKMVDLLAGPDAYRDLPRLLAVVES 219
Query: 113 -EKAVEVAIDYDES-AYAFEFFEKKAQIRSLLNISIGCDKKCAYCIVPHTRGKEISIPMD 170
++A V + DE+ A + + ++I GCD C+YCIVP TRG+E S P+
Sbjct: 220 GQQAANVLLSLDETYADIMPVQTSPSATSAFVSIMRGCDNMCSYCIVPFTRGRERSRPVA 279
Query: 171 LILKEAEKLANNGTKELMLLGQNVNNY 197
IL E KL+ G KE+ LLGQNVN++
Sbjct: 280 SILDEVRKLSEQGLKEVTLLGQNVNSF 306
>ref|NP_393736.1| (NC_002578) hypothetical protein [Thermoplasma acidophilum]
emb|CAC11401.1| (AL445063) hypothetical protein [Thermoplasma acidophilum]
Length = 401
Score = 132 bits (331), Expect = 1e-29
Identities = 99/388 (25%), Positives = 180/388 (45%), Gaps = 43/388 (11%)
Query: 1 MKVYIETMGCAMNSRDSEHLLSELSKLDYKETNDPKTADLILINTCSVREKPERKLFSEI 60
MK+Y E GC +N ++ +++L + P AD+ +I TC+V +K E + I
Sbjct: 1 MKIYYEGYGCTLNQGETGLYVNKLLSEGSVLVSRPDEADISIIGTCAVIQKTEDHMLKRI 60
Query: 61 GQFAKIKKPNAKIGVCGCTASHMGADILKKAPSVSFVLGARNVSKISQVIHKEKAVEVAI 120
+ +++ ++ V GC ++ G++I N+ AI
Sbjct: 61 EELSRL----GRVKVIGCLSAIKGSEI-----------SGGNIE--------------AI 91
Query: 121 DYDESAYAFEFFEKK----AQIRSLLNISIGCDKKCAYCIVPHTRGKEISIPMDLILKEA 176
D +E E+ E A+I S + I+ GC KC +CI RGK +S + I+ +
Sbjct: 92 DRNEFQQFQEYLEDTSIIDAEIMSGIPINQGCTGKCNFCISHIARGKLVSRRPEKIVNQI 151
Query: 177 EKLANNGTKELMLLGQNVNNYGARFSSEHAKVDFSDLLDKLSEIQGIERIRFTSPHP--- 233
+ G +E+ + + YG + L+ ++ + G +R P
Sbjct: 152 RMMVAAGKREIRISSLDTAAYG-----KDTGYRLPSLIKDITAVDGDFMLRVGMMEPRNT 206
Query: 234 LHMNDGFLERFAKNPKVCKSIHMPLQSGSSAVLKMMRRGYSKEWFLNRVERLKALVPEVG 293
+ + D LE + +PKV K +H+P+QSG VL M R Y+ + F+ +E + P++
Sbjct: 207 IEILDDLLEAY-DDPKVFKFLHIPVQSGDDRVLTAMNREYTVDEFMQIIESFRKRFPDMT 265
Query: 294 ISTDIIVGFPNESDKDFEDTMEVLEKVRFDTLYSFIYSPRPFTEAGAWKERVPLEVSSSR 353
ISTD+I+G+ E+D+ F+ T +++ KV+ + + +SPR T + R P V +
Sbjct: 266 ISTDVIIGYHAENDRSFDLTCDLIRKVQPEIINVTRFSPRELTPDFEHRPR-PTNVLKDQ 324
Query: 354 LERLQNRHKEILEEKAKLEVGKTHVVLV 381
+ H++I+ E+ VGK +L+
Sbjct: 325 DRTMAEIHRKIVSERFSALVGKVERILI 352
>gb|AAG43441.1|AF186181_1 (AF186181) slr0082 [Synechococcus sp. PCC 7002]
Length = 317
Score = 125 bits (314), Expect = 1e-27
Identities = 81/283 (28%), Positives = 140/283 (48%), Gaps = 8/283 (2%)
Query: 142 LNISIGCDKKCAYCIVPHTRGKEISIPMDLILKEAEKLANNGTKELMLLGQNVNNYGARF 201
L ++ GCD +CA+CI+PH RG + S P++ I+ EA++LA G +E++L+ Q NYG
Sbjct: 26 LRVAEGCDYRCAFCIIPHLRGDQRSRPIESIVAEAKQLAEQGVQEIILISQITTNYGKDI 85
Query: 202 SSEHAKVDFSDLLDKLSEIQGIERIRFTSPHPLHMNDGFLERFAKNPKVCKSIHMPLQSG 261
+ K ++LL L + + IR +P + + P V + +PLQ
Sbjct: 86 ---YGKPKLAELLRALGGVD-VPWIRIHYAYPTGLTPEVIAAMRDTPNVIPYLDLPLQHS 141
Query: 262 SSAVLKMMRRGYSKEWFLNRVERLKALVPEVGISTDIIVGFPNESDKDFEDTMEVLEKVR 321
+L+ M R + +E LK +P+ + T IVGFP E+++ F+ ++ +++
Sbjct: 142 HPDILRAMNRPWQGRVNDRIIEDLKKALPDAILRTTFIVGFPGETEEHFQHLVDFVKRHE 201
Query: 322 FDTLYSFIYSPRPFTEAGAWKERVPLEVSSSRLERLQNRHKEILEEKAKLEVGKTHVVLV 381
FD + F +S T A ++P V SR + L + I + +L VG+T VL+
Sbjct: 202 FDHVGVFTFSAEEGTPAIDLPNQLPQSVKDSRRDALMEIQQPIAARRNELCVGQTVDVLI 261
Query: 382 ENRREMDNQIVGFEGR--SDTGKFIEVTCKEKRNPGELVKVEI 422
E +++G R D + VT + + G +V V+I
Sbjct: 262 EQENPATGELIGRSPRFAPDVDGLVYVT--GEASLGSIVPVQI 302
>ref|NP_218710.1| (NC_000919) conserved hypothetical protein [Treponema pallidum]
sp|O83293|Y269_TREPA Hypothetical protein TP0269
pir||G71345 conserved hypothetical protein TP0269 - syphilis spirochete
gb|AAC65257.1| (AE001208) conserved hypothetical protein [Treponema pallidum]
Length = 482
Score = 124 bits (310), Expect = 3e-27
Identities = 68/220 (30%), Positives = 118/220 (52%), Gaps = 7/220 (3%)
Query: 139 RSLLNISIGCDKKCAYCIVPHTRGKEISIPMDLILKEAEKLANNGTKELMLLGQNVNNYG 198
R+ + + GC+ CA+C + RG+ +S+ ++ + L G E++L G N++ Y
Sbjct: 204 RASIKVQDGCNSGCAFCRIRFARGRAVSLETHEVIGRVQALEARGMSEVVLTGVNLSQYR 263
Query: 199 ARFSSEHAKVDFSDLLDKLSEIQGIERIRFTSPHPLHMNDGFLERFAKNPKVCKSIHMPL 258
+ +DF+ LL+ + + IR +S +P + FL A + +V H+ +
Sbjct: 264 S------GSIDFAGLLELIVQETHTIHIRISSLYPESVTSAFLRAIA-HTRVSPHFHLSV 316
Query: 259 QSGSSAVLKMMRRGYSKEWFLNRVERLKALVPEVGISTDIIVGFPNESDKDFEDTMEVLE 318
QSGS VL+ MRR Y++ V L+++ E + DIIVGFP E+++DF DT + +
Sbjct: 317 QSGSDRVLRRMRRAYTRADIYQAVSDLRSVREEPFLGCDIIVGFPGETEEDFADTQRMCK 376
Query: 319 KVRFDTLYSFIYSPRPFTEAGAWKERVPLEVSSSRLERLQ 358
+RF ++ F +S RP TEA A +VP ++ R+ +Q
Sbjct: 377 TLRFAGIHVFPFSARPGTEAFAMDAKVPQRIAGERVAAMQ 416
>pir||T10441 conserved hypothetical protein - Mycoplasma iowae
gb|AAC44030.1| (U29676) unknown [Mycoplasma iowae]
Length = 249
Score = 101 bits (251), Expect = 2e-20
Identities = 63/211 (29%), Positives = 109/211 (50%), Gaps = 7/211 (3%)
Query: 185 KELMLLGQNVNNYGARFSSEHAKVDFSDLLDKLSEIQGIERIRFTSPHPLHMNDGFLERF 244
KE++L G N Y + F DLL+ ++++ G R+R +S P +ND ++
Sbjct: 7 KEIVLTGVNTAGY-----LDENNNTFFDLLNNINKLDGDFRVRISSLEPFQINDEIIDLV 61
Query: 245 AKNPK-VCKSIHMPLQSGSSAVLKMMRRGYSKEWFLNRVERLKALVPEVGISTDIIVGFP 303
N K C+ H+ LQSGS VLK M R Y+ + F ++++ P +TD IVGFP
Sbjct: 62 TSNKKRFCQHWHICLQSGSDDVLKKMNRKYTTDEFYKLMQKILNKSPLTNFTTDYIVGFP 121
Query: 304 NESDKDFEDTMEVLEKVRFDTLYSFIYSPRPFTEAGAWKERVPLEVSSSRLERLQNRHKE 363
E+D+D + +++ L K++ ++ F YS R T + +K+ + R++ + +
Sbjct: 122 TETDEDQKKSIDFLNKIKLYDMHIFPYSKRNNTRSSHYKD-INDSTKKDRVKEITKLNYL 180
Query: 364 ILEEKAKLEVGKTHVVLVENRREMDNQIVGF 394
+E K +GKT VL E ++E + G+
Sbjct: 181 NKKENLKKYIGKTCEVLFEKKKEDEKMWSGY 211
>emb|CAA72027.1| (Y11140) homology to M. leprae B2235_C2_195 and H. influenzae
GB:U00019_14 [Bacillus cereus]
Length = 226
Score = 84.7 bits (208), Expect = 2e-15
Identities = 45/126 (35%), Positives = 68/126 (53%), Gaps = 9/126 (7%)
Query: 2 KVYIETMGCAMNSRDSEHLLSELSKLDYKETNDPKTADLILINTCSVREKPERKLFSEIG 61
K YI T GC MN D+E + + L Y+ T + AD++L+NTC++RE E K+F E+G
Sbjct: 67 KFYIRTYGCQMNEHDTEVMAGIFTALGYEPTFSTEEADVVLLNTCAIRENAENKVFGELG 126
Query: 62 QFAKIKK--PNAKIGVCGCTASHMGA--DILKKAPSVSFVLGARNVSKISQVI-----HK 112
+K+ P+ IGVCGC + I++K V V G N+ ++ ++ K
Sbjct: 127 HLKALKRRNPDLLIGVCGCMSQEESVVNKIMQKNQHVDMVFGTHNIHRLPYILKDAMFSK 186
Query: 113 EKAVEV 118
E VEV
Sbjct: 187 ETVVEV 192
>ref|NP_614081.1| (NC_003551) Predicted Fe-S oxidoreductase [Methanopyrus kandleri
AV19]
gb|AAM02011.1| (AE010371) Predicted Fe-S oxidoreductase [Methanopyrus kandleri
AV19]
Length = 435
Score = 84.3 bits (207), Expect = 3e-15
Identities = 56/203 (27%), Positives = 97/203 (47%), Gaps = 11/203 (5%)
Query: 147 GCDKKCAYCIVPHTRGKEISI-PMDLILKEAEKLANNGTKELMLLGQNVNNYGARFSSEH 205
GC C +C VP G+ + P++ +L+E +L G + + G V YG
Sbjct: 173 GCPGACTFCQVPEFFGRRVRWKPVEAVLEEVRELTRGGARRFAISGGTVTTYG------D 226
Query: 206 AKVDFSDLLDKLSEIQGIERIRFTSPHPLHMNDGFLERFAKNPKVCKSIHMPLQSGSSAV 265
+ DF +LL +L+++ G E + +N+ LE A I + ++SGS +
Sbjct: 227 DEEDFVELLKRLADLLGRENVSAPDVRADLLNERLLE--AIRDYTIGWIFLGIESGSDRI 284
Query: 266 LKMMRRGYSKEWFLNRVERLKALVPEVGISTDIIVGFPNESDKDFEDTMEVLEKVRFDTL 325
L+ MR+G + + VE + + V ++ IVG+P E++ D E T E+L ++ D +
Sbjct: 285 LRAMRKGITVDDVCEAVELARTV--GVRVAGSFIVGYPGETEDDLEATEELLTELNLDDV 342
Query: 326 YSFIYSPRPFTEAGAWKERVPLE 348
+ + P P TE G +P E
Sbjct: 343 FINLAEPIPGTELGRLVTELPEE 365
>ref|NP_276299.1| (NC_000916) phosphonoacetaldehyde methylase [Methanothermobacter
thermautotrophicus] [Methanothermobacter
thermautotrophicus str. Delta H]
pir||B69023 conserved hypothetical protein MTH1171 - Methanobacterium
thermoautotrophicum (strain Delta H)
gb|AAB85660.1| (AE000886) phosphonoacetaldehyde methylase [Methanothermobacter
thermautotrophicus str. Delta H]
Length = 438
Score = 80.1 bits (196), Expect = 5e-14
Identities = 59/234 (25%), Positives = 107/234 (45%), Gaps = 25/234 (10%)
Query: 147 GCDKKCAYCIVPHTRGKEI-SIPMDLILKEAEKLANNGTKELMLLGQNVNNYGARFSSEH 205
GC C +C VP G+ + S P+ I+ E +L ++G + + G YG SS+
Sbjct: 164 GCPGNCTFCQVPEFFGRNVRSRPLKDIIMEVRELKSSGARRFAISGGTGTLYG---SSKF 220
Query: 206 AKVD---FSDLLDKLSEIQGIE-------RIRFTSPHPLHMNDGFLERFAKNPKVCKSIH 255
+D F DLL +SE+ G R+ SP L + + +
Sbjct: 221 RGIDEEAFRDLLRCISEVTGSRNLTVPDIRVDMVSPEILDAISEYTNGW---------VF 271
Query: 256 MPLQSGSSAVLKMMRRGYSKEWFLNRVERLKALVPEVGISTDIIVGFPNESDKDFEDTME 315
++SGS +L+ M++G + + + VE + + ++ IVG+P E D D+++T+E
Sbjct: 272 YGIESGSRRMLRKMKKGITPDQVVEAVELAREY--NLKVAGSFIVGYPGEDDDDYQETLE 329
Query: 316 VLEKVRFDTLYSFIYSPRPFTEAGAWKERVPLEVSSSRLERLQNRHKEILEEKA 369
+ +++ D + I P P TE G +P + + ++ R + EE+A
Sbjct: 330 LADELMLDDYFVSIAEPLPGTELGEEVMELPEDENPVFMKSSNRRFDSLAEERA 383
>pir||T10440 conserved hypothetical protein - Mycoplasma iowae
gb|AAC44029.1| (U29676) unknown [Mycoplasma iowae]
Length = 199
Score = 75.1 bits (183), Expect = 2e-12
Identities = 54/190 (28%), Positives = 96/190 (50%), Gaps = 10/190 (5%)
Query: 5 IETMGCAMNSRDSEHLLSELSKLDYKETNDPKTADLILINTCSVREKPERKLFSEIGQFA 64
I T+GC +N +S + ++L E AD+ +INTC+V K + K I + A
Sbjct: 12 IHTLGCKVNLFESNSIKNDLIMNGLVEVPFDSKADVYIINTCTVTNKADAKSRLYIKR-A 70
Query: 65 KIKKPNAKIGVCGCTASHMGADILKKAPSVSFVLGARNVSKISQVIHKEKAVEVAIDYDE 124
++ +A I V GC S + D++ K +S +G + + + +I++ I E
Sbjct: 71 HVQNKDAIIIVAGCM-SQVNKDLMDKL-KISIQIGNKYKNSVFDLINEYLKKRERIYRVE 128
Query: 125 SAYAFEFFEKKAQ-------IRSLLNISIGCDKKCAYCIVPHTRGKEISIPMDLILKEAE 177
+ A + FE+ Q R+ + I GC+ C+YCI+P +RG++ S M+ IL++ +
Sbjct: 129 NILAEKKFEQTTQDFIFLENTRAFIKIQDGCNFMCSYCIIPFSRGRQRSQKMESILEKIK 188
Query: 178 KLANNGTKEL 187
L + K+L
Sbjct: 189 TLVSKNLKKL 198
>ref|NP_247860.1| (NC_000909) conserved hypothetical protein [Methanococcus
jannaschii] [Methanocaldococcus jannaschii]
sp|Q58275|Y865_METJA Hypothetical protein MJ0865
pir||A64408 conserved hypothetical protein MJ0865 - Methanococcus jannaschii
gb|AAB98870.1| (U67530) conserved hypothetical protein [Methanococcus jannaschii]
[Methanocaldococcus jannaschii]
Length = 449
Score = 74.7 bits (182), Expect = 2e-12
Identities = 71/318 (22%), Positives = 142/318 (44%), Gaps = 26/318 (8%)
Query: 38 ADLILINTCSVREKPERKLFSEIGQFAKIKKPNAKIGVCGCTASHMGADILKKAPSVSFV 97
+D+I+ + S ++ + I K++K K+ V GC +++ +I+ +V V
Sbjct: 52 SDVIIFSLYSTLHILDKNIREAIDFIKKVRKNKTKVYVAGCVSTY--PEIILNELNVDGV 109
Query: 98 LGARNVSKISQVIHKEK-------AVEVAIDYDESA----YAFEFFEKKAQIRSLLNISI 146
+ ++I +K E+ I+Y + + K + +S+ ++
Sbjct: 110 IVGEGEITTPKIIEGDKEGLAYKEGDEIVINYPKEKPDLNHPLPLIPKDIEQQSIRGANV 169
Query: 147 ------GCDKKCAYCIVPHTRGKEI-SIPMDLILKEAEKLANNGTKELMLLGQNVNNYGA 199
GC C +C VP GK I S ++ +++E + G K + + G + Y
Sbjct: 170 YIETHRGCLGNCTFCQVPKFFGKTIRSRDVEDVVEEVKAFKRAGAKRIAISGGTGSLYAF 229
Query: 200 RFSSEHAKVDFSDLLDKLSEIQGIERIRFTSPHPLHMNDGFLERFAKNPKVCKSIHMPLQ 259
+ S K F +LL+K+SE+ G + ++++ LE KN + + ++
Sbjct: 230 KKSINRDK--FFELLEKVSEVIGKNNLSVPDMRVDYVDEEILEAI-KNYTI-GWVFYGIE 285
Query: 260 SGSSAVLKMMRRGYSKEWFLNRVERLKALVPEVGISTDIIVGFPNESDKDFEDTMEVLEK 319
SGS +LK M++G ++E L+ ++ K V ++ IV +P E++ D+ T + +
Sbjct: 286 SGSDKILKDMKKGTNREKNLDAIKLAKDC--GVKVAGSFIVAYPTETEMDYLLTKDFIVD 343
Query: 320 VRFDTLYSFIYSPRPFTE 337
D ++ I P P TE
Sbjct: 344 AELDDVFVSIAEPIPTTE 361
>ref|NP_248493.1| (NC_000909) conserved hypothetical protein [Methanococcus
jannaschii] [Methanocaldococcus jannaschii]
pir||F64485 hypothetical protein MJ1487 - Methanococcus jannaschii
gb|AAB99497.1| (U67589) conserved hypothetical protein [Methanococcus jannaschii]
[Methanocaldococcus jannaschii]
Length = 426
Score = 68.6 bits (166), Expect = 1e-10
Identities = 55/186 (29%), Positives = 90/186 (47%), Gaps = 15/186 (8%)
Query: 142 LNISIGCDKKCAYCIVPHTRGKEI-SIPMDLILKEAEKLANNGTKELMLLGQNVNNYGAR 200
+ I+ GC KC +C P GK+I ++ I K E +A K++ + N YG++
Sbjct: 177 IEITRGCPYKCYFCQTPRIFGKKIRHRDVENIYKYVEIMAERNLKDIRFITPNAFGYGSK 236
Query: 201 FSSEHAKVDFSDLLDKLSEIQGIE-RIRF----TSPHPLHMNDGFLE---RFAKNPKVCK 252
LL+ + EI G RI F + P H+N ++ R+A N K
Sbjct: 237 DGKTLNIDKIEKLLESIREILGNNGRIFFGTFPSEVRPEHVNIETVDLILRYADN----K 292
Query: 253 SIHMPLQSGSSAVLKMMRRGYSKEWFLNRVERLKALVPEVGISTDIIVGFPNESDKDFED 312
++ + QSGS VL++ RG++ E N V A +G+ D I G P E+++D E
Sbjct: 293 NLVIGAQSGSEKVLELCHRGHTVEDVYNAVR--VARKAGLGVDVDFIFGLPGETEEDVEK 350
Query: 313 TMEVLE 318
T++V++
Sbjct: 351 TIKVMK 356
>ref|NP_227997.1| (NC_000853) conserved hypothetical protein [Thermotoga maritima]
pir||A72408 conserved hypothetical protein - Thermotoga maritima (strain MSB8)
gb|AAD35275.1|AE001703_4 (AE001703) conserved hypothetical protein [Thermotoga maritima]
Length = 397
Score = 68.2 bits (165), Expect = 2e-10
Identities = 58/209 (27%), Positives = 100/209 (47%), Gaps = 22/209 (10%)
Query: 142 LNISIGCDKKCAYCIVPHTRGKEISI-PMDLILKEAEKLANNGTKELMLLGQNVNNYGAR 200
+ I+ GC CAYC P G+ + +D+++ A+ +G K + N YG++
Sbjct: 143 IEITRGCPFSCAYCQTPIIAGRRVRHRDVDVVVHYAKLGVKHGRKLARFIAPNSFGYGSK 202
Query: 201 FSSEHAKVDFSDLLDKLSEIQGIERIRF----TSPHPLHMNDGFLE---RFAKNPKVCKS 253
+LL L ++ GIE I F + P + D L+ ++ N +S
Sbjct: 203 NGVTPNVEKIEELLYGLKKV-GIEEIYFGTFPSEVRPESVTDEVLKVVKKYVNN----RS 257
Query: 254 IHMPLQSGSSAVLKMMRRGYSKEWFLNRVER--LKALVPEVGISTDIIVGFPNESDKDFE 311
I + QSGS +LK+++RG++ E +E+ L +P V D I GFP E+++D E
Sbjct: 258 IVIGAQSGSDRILKIIKRGHTVEQVEEAIEKISLHGFIPHV----DFIFGFPFETEEDVE 313
Query: 312 DTMEVLEKV--RFDT-LYSFIYSPRPFTE 337
T + K+ R+ +++ + P P TE
Sbjct: 314 KTFSFIVKIVERYGAKIHAHTFMPLPGTE 342
>ref|NP_615215.1| (NC_003552) conserved hypothetical protein [Methanosarcina
acetivorans str. C2A] [Methanosarcina acetivorans C2A]
gb|AAM03695.1| (AE010682) conserved hypothetical protein [Methanosarcina
acetivorans str. C2A] [Methanosarcina acetivorans C2A]
Length = 373
Score = 67.0 bits (162), Expect = 4e-10
Identities = 73/271 (26%), Positives = 121/271 (43%), Gaps = 25/271 (9%)
Query: 87 ILKKAPSVSFVLGARNVSKISQVIHKEKAVEVAIDYDESAYAFEFFEKKAQIRSLLNISI 146
+LK+ + V G S ++I + V +D A+ F+ K ++R+ + IS
Sbjct: 97 VLKEGGNPGEVKGIAYKSDTCRIIETPERQHVNLD------AYPCFDPK-RLRAPIEISR 149
Query: 147 GCDKKCAYCIVPHTRGKEI-SIPMDLILKEAEKLANNGTKELMLLGQNVNNYGARFSSEH 205
GC C YC P G+E+ +D +LK A +L + N YG+ H
Sbjct: 150 GCPWGCRYCQTPRLFGREVRHRSIDSVLKNARYY-----DDLRFIASNAFAYGS--DGIH 202
Query: 206 AKVD-FSDLLDKLSEIQGIERIRFTSPHPLHMNDGFLERFAKNPKVC--KSIHMPLQSGS 262
+ D LL L E+ + T P + E K C S+ + QSGS
Sbjct: 203 PRFDKVEKLLSALHELPDKKIFFGTFPSEVRPEFVTEESVELVRKYCANDSLSLGAQSGS 262
Query: 263 SAVLKMMRRGYSKEWFLNRVERLKALVPEVGISTDIIVGFPNESDKDFEDTMEVLEKV-- 320
VLK +RRG++ E ++ VE L E+ + D I G P E+++D E ++E++ +
Sbjct: 263 DRVLKEIRRGHTVEDSISAVE--CCLEHEIAPAVDFIFGLPTETEEDQEKSLELVRWICK 320
Query: 321 RFDTLYSFIYSPRPFTEAGAWKERVPLEVSS 351
+ T+ + +P P T + VP +VS+
Sbjct: 321 KGGTVRAHYMTPLPGT---PYASAVPSKVSN 348
>ref|NP_376775.1| (NC_003106) 492aa long conserved hypothetical protein [Sulfolobus
tokodaii]
dbj|BAB65884.1| (AP000984) 492aa long conserved hypothetical protein [Sulfolobus
tokodaii]
Length = 492
Score = 62.4 bits (150), Expect = 1e-08
Identities = 80/337 (23%), Positives = 152/337 (44%), Gaps = 44/337 (13%)
Query: 55 KLFSEIGQFAKIKKPNAKIGVCGCTASHMGADILKKAPS--VSFVLGARNVSKISQVIHK 112
K F E+G+ KIKK +K + GA L+K P + V +++ K
Sbjct: 87 KFFEELGE--KIKKIKSKYDI-KVVVGGAGAWQLEKEPPEWIDVVFIGHAEIDFPEIVKK 143
Query: 113 EKAVEVAIDYDESAYAFEFFEKKAQIRSLLN--------ISIGCDKKCAYCIVPHTRGKE 164
+ E ++ Y +K ++I ++N I+ GC + C +C V T
Sbjct: 144 LEEGEKVPRVVKARYP----KKLSEIPPIINAARGGEVQITRGCPRGCWFCSV--TPDTF 197
Query: 165 ISIPMDLILKEAEKLANNGTKELMLLGQNVNNYGARFSSEHAKVDFSDLLDKLSEIQ--G 222
IS P+D ILKE E G K++ L+ ++ YGA+ E V+ ++ +E++ G
Sbjct: 198 ISFPIDYILKEVEVNMRAGIKDVSLITDDMMLYGAKSLRE---VNHDAIIRLYTELKKAG 254
Query: 223 IERIRFT--SPHPLHMNDGFLERFAK----NPKVCKSIHMPLQSGSSAVLKMMRRGYSKE 276
++ I F S P+ ++ ++ ++ N + S + L++GS + + +
Sbjct: 255 VDYINFAHISAAPVKLSPRTIKEMSEIAGWNEQKAVSPVVGLETGSEKIFNKYMKMKAFP 314
Query: 277 WFLNRVERLKALVPEVGISTD--------IIVGFPNESDKDFEDTMEVLEKVRFDTLYSF 328
W N + L +V I D + +G+P+E+D+D E +++++E + ++
Sbjct: 315 WGYNNWKDL--IVEATAIMNDSYIYPCYTMTIGYPDETDEDVEQSIKLVEYIIDHKPIAW 372
Query: 329 IYSPRPFTEAGAWKERVPLEVSSSRLERLQNRHKEIL 365
I+ P P G K R + +ERL +R+ ++L
Sbjct: 373 IF-PLPVIPMGTSKIR---DNPLPAIERLPSRYWDLL 405
>ref|NP_633546.1| (NC_003901) Fe-S oxidoreductase [Methanosarcina mazei Goe1]
gb|AAM31218.1| (AE013386) Fe-S oxidoreductase [Methanosarcina mazei Goe1]
Length = 374
Score = 60.8 bits (146), Expect = 3e-08
Identities = 62/229 (27%), Positives = 106/229 (46%), Gaps = 19/229 (8%)
Query: 128 AFEFFEKKAQIRSLLNISIGCDKKCAYCIVPHTRGKEI-SIPMDLILKEAEKLANNGTKE 186
++ F+ K ++R+ + IS GC C YC P G+E+ +D ILK A+ +
Sbjct: 133 SYPCFDPK-KLRAPIEISRGCPWGCKYCQTPRLFGREVRHRSIDSILKNAQHY-----ND 186
Query: 187 LMLLGQNVNNYGARFSSEHAKVD-FSDLLDKLSEIQGIERIRFTSPHPLHMNDGFLERFA 245
L + N YG+ H + D LL L ++ + T P + E
Sbjct: 187 LRFIASNAFAYGS--DGIHPRFDKVEKLLSALHKLPDKKIFFGTFPSEVRPEFVTEESVE 244
Query: 246 KNPKVC--KSIHMPLQSGSSAVLKMMRRGYSKEWFLNRVERLKALVPEVGISTDIIVGFP 303
K C S+ + QSGS +LK +RRG++ E ++ VE L ++ + D I G P
Sbjct: 245 LVRKYCANDSLSLGAQSGSDRILKEIRRGHTVEDSISAVE--CCLEHDIMPAVDFIFGLP 302
Query: 304 NESDKDFEDTMEVLEKV--RFDTLYSFIYSPRPFTEAGAWKERVPLEVS 350
E+++D E ++E++ + + T+ + +P P T + VP +VS
Sbjct: 303 TETEEDQEKSLELVRWICEKGGTVRAHYMTPLPGT---PYASSVPSDVS 348
>dbj|BAB23330.1| (AK004490) data source:SPTR, source key:Q9NXB3,
evidence:ISS~homolog to CDNA FLJ20342 FIS, CLONE
HEP13572~putative [Mus musculus]
Length = 230
Score = 60.1 bits (144), Expect = 5e-08
Identities = 31/72 (43%), Positives = 48/72 (66%), Gaps = 1/72 (1%)
Query: 286 KALVPEVGISTDIIVGFPNESDKDFEDTMEVLEKVRFDTLYSFIYSPRPFTEAGAWKERV 345
K VP + I+TDII GFP E+D+DF++T++++E+ +F +L+ + PRP T A A E+V
Sbjct: 1 KEKVPGITIATDIICGFPGETDQDFQETVKLVEEYKFPSLFINQFYPRPGTPA-AKAEQV 59
Query: 346 PLEVSSSRLERL 357
P V R + L
Sbjct: 60 PAHVKKQRTKDL 71
>ref|NP_344196.1| (NC_002754) Conserved hypothetical protein [Sulfolobus
solfataricus]
gb|AAK42986.1| (AE006880) Conserved hypothetical protein [Sulfolobus solfataricus]
Length = 502
Score = 58.9 bits (141), Expect = 1e-07
Identities = 59/240 (24%), Positives = 114/240 (46%), Gaps = 27/240 (11%)
Query: 142 LNISIGCDKKCAYCIVPHTRGKEISIPMDLILKEAEKLANNGTKELMLLGQNVNNYGARF 201
+ I+ GC + C +C V T IS P+D I++E E G K++ L+ ++ YGA+
Sbjct: 184 VQITRGCPRGCWFCSV--TPDTFISFPLDYIMREVEVNMKAGIKDVSLITDDMLLYGAKR 241
Query: 202 SSEHAKVDFSDLLDKLSEIQ--GIERIRFT--SPHPLHMNDGFLERFAK----NPKVCKS 253
+E V+ ++ +E++ G++ I F S P+ ++ ++ A+ N + S
Sbjct: 242 LNE---VNHDAIVRLYAELKRAGVDYINFAHISAAPVKLSPKTVKAMAEIAEWNEEKAVS 298
Query: 254 IHMPLQSGSSAVLKMMRRGYSKEWFLNRVERLKALVPEVGISTD--------IIVGFPNE 305
+ L++GS + + + W N +V I + + +G+P E
Sbjct: 299 PVVGLETGSEKIFNKYMKMKAFPW--NYTNWKDLIVESTAIMNESYIFPCYTMTIGYPEE 356
Query: 306 SDKDFEDTMEVLEKVRFDTLYSFIYSPRPFTEAGAWKERVPLEVSSSRLERLQNRHKEIL 365
+DKD ED+++++E + ++I+ P P G K R + LERL +R+ ++L
Sbjct: 357 TDKDVEDSIKLVEYIIDHEPIAWIF-PLPVIPMGLSKIR---DNPLPALERLPSRYWDLL 412
>ref|NP_143544.1| (NC_000961) hypothetical protein [Pyrococcus horikoshii]
pir||G71177 hypothetical protein PH1701 - Pyrococcus horikoshii
Length = 428
Score = 57.0 bits (136), Expect = 4e-07
Identities = 57/203 (28%), Positives = 93/203 (45%), Gaps = 19/203 (9%)
Query: 124 ESAYAFEFFEKKAQIRSLLNISIGCDKKCAYCIVPHTRGKEI-SIPMDLILKEAEKLANN 182
E + F + + ++ S + IS GC C YC P+ +G + P+D I+K + ++
Sbjct: 154 EDFWKFPPYPEGLKLISPMEISRGCPFGCYYCQTPYAKGFRMRHRPIDQIVKYSRRM--- 210
Query: 183 GTKELMLLGQNVNNYGARFSSEHAKVD-FSDLLDKLSEIQGIERIRFTSPHPLHMNDGFL 241
K++ + N YG+ KV+ LL L ++ R F P + F+
Sbjct: 211 --KDMRYITPNAFAYGS--PGGILKVEKVEALLRALQPLRKEGRRLFYGTFPSEVRPDFV 266
Query: 242 ERFAKNPKV----CKSIHMPLQSGSSAVLKMMRRGYSKEWFLNRVERLKALVPEVGIS-- 295
R V K I + QSG +A+LK M R + E +N VE L E G+
Sbjct: 267 TRETLELLVKYTDTKRIAIGAQSGDNAMLKAMHRLHKVEHVINAVE----LSLEYGLEPV 322
Query: 296 TDIIVGFPNESDKDFEDTMEVLE 318
D IVG PNES + + ++E+++
Sbjct: 323 VDFIVGLPNESPESQKKSIELMK 345
>ref|NP_490844.1| (NM_058443) Y92H12BL.3.p [Caenorhabditis elegans]
gb|AAK19006.1| (AC084268) Hypothetical protein Y92H12BL.3 [Caenorhabditis elegans]
Length = 339
Score = 55.1 bits (131), Expect = 2e-06
Identities = 33/100 (33%), Positives = 56/100 (56%), Gaps = 6/100 (6%)
Query: 284 RLKALVPEVGISTDIIVGFPNESDKDFEDTMEVLEKVRFDTLYSFIYSPRPFTEAGAWK- 342
RL + VP + I+TD+I+ FP E+ +DFE++ME++ K +F +L+ Y PR T A K
Sbjct: 123 RLTSRVPNIYIATDMILAFPTETLEDFEESMELVRKYKFPSLFINQYYPRSGTPAARLKK 182
Query: 343 -ERVPLEVSSSRLERLQNRHKEILEEKAKLEVGKTHVVLV 381
+ V ++ + L + +E+ +G+ H VLV
Sbjct: 183 IDTVEARKRTAAMSELFRSYTRYTDER----IGELHRVLV 218
>ref|NP_126164.1| (NC_000868) hypothetical protein [Pyrococcus abyssi]
pir||D75164 hypothetical protein PAB0314 - Pyrococcus abyssi (strain Orsay)
emb|CAB49395.1| (AJ248284) hypothetical protein [Pyrococcus abyssi]
Length = 425
Score = 53.1 bits (126), Expect = 6e-06
Identities = 53/203 (26%), Positives = 92/203 (45%), Gaps = 19/203 (9%)
Query: 124 ESAYAFEFFEKKAQIRSLLNISIGCDKKCAYCIVPHTRGKEI-SIPMDLILKEAEKLANN 182
E + F + + ++ S + IS GC C YC P+ +G + P+D I+K + ++
Sbjct: 151 EDFWKFPPYPEGLKLISPMEISRGCPFGCYYCQTPYAKGFRMRHRPIDQIVKYSRRM--- 207
Query: 183 GTKELMLLGQNVNNYGARFSSEHAKVD-FSDLLDKLSEIQGIERIRFTSPHPLHMNDGFL 241
K++ + N YG+ K++ LL L ++ R F P + F+
Sbjct: 208 --KDMRYITPNAFAYGS--PGGILKIEKVEALLRALQPLRKEGRRLFYGTFPSEVRPEFV 263
Query: 242 ERFAKNPKV----CKSIHMPLQSGSSAVLKMMRRGYSKEWFLNRVERLKALVPEVGIS-- 295
R V + + + QSG A+LK M R + E +N VE L E G++
Sbjct: 264 TRETIELLVDYTDTRRLAIGAQSGDDAMLKAMHRVHKVEHVVNAVE----LALEYGLTPV 319
Query: 296 TDIIVGFPNESDKDFEDTMEVLE 318
D IVG PNE+ + ++E+++
Sbjct: 320 VDFIVGLPNETPESQRKSIELMK 342
>ref|NP_579452.1| (NC_003413) hypothetical protein [Pyrococcus furiosus DSM 3638]
gb|AAL81847.1| (AE010270) hypothetical protein [Pyrococcus furiosus DSM 3638]
Length = 425
Score = 50.8 bits (120), Expect = 3e-05
Identities = 53/203 (26%), Positives = 92/203 (45%), Gaps = 19/203 (9%)
Query: 124 ESAYAFEFFEKKAQIRSLLNISIGCDKKCAYCIVPHTRGKEI-SIPMDLILKEAEKLANN 182
E + F + + ++ S + IS GC C YC P+ +G + P+D I+K ++++
Sbjct: 151 EDFWKFPPYPEGLKLISPMEISRGCPFGCYYCQTPYAKGFRMRHRPIDQIVKYSKRM--- 207
Query: 183 GTKELMLLGQNVNNYGARFSSEHAKVD-FSDLLDKLSEIQGIERIRFTSPHPLHMNDGFL 241
K++ + N YG+ K++ LL L ++ R F P + F+
Sbjct: 208 --KDMRYITPNAFAYGS--PGGILKIEKVEALLRALQPLRREGRRLFYGTFPSEVRPEFV 263
Query: 242 ERFAKNPKV----CKSIHMPLQSGSSAVLKMMRRGYSKEWFLNRVERLKALVPEVGIS-- 295
R V K + + QSG +LK M R + E +N VE L E GI+
Sbjct: 264 TRETVELLVKYTDTKRLAIGAQSGDDKMLKAMHRVHRVEHVINAVE----LSLEYGITPV 319
Query: 296 TDIIVGFPNESDKDFEDTMEVLE 318
D IVG P E+++ ++E+++
Sbjct: 320 VDFIVGLPGETEEMQRKSIELMK 342
>ref|NP_111529.1| (NC_002689) Fe-S oxidoreductase [Thermoplasma volcanium]
dbj|BAB60181.1| (AP000995) hypothetical protein [Thermoplasma volcanium]
Length = 540
Score = 49.7 bits (117), Expect = 7e-05
Identities = 45/206 (21%), Positives = 95/206 (45%), Gaps = 26/206 (12%)
Query: 142 LNISIGCDKKCAYC-IVPHTRGKEISIPMDLILKEAEKLANNGTKELMLLGQNVNNYGAR 200
+ I+ GC + C +C I P T SIPMD I+KE + ++G + + LL ++ YG
Sbjct: 214 VQITRGCPRGCQFCSITPETFR---SIPMDDIIKEVKLNIDHGIRGIELLTDDIMLYG-- 268
Query: 201 FSSEHAKVDFSDLLDKLSEIQGIERIRFTSPH--------PLHMNDGFLERFAKNPKVCK 252
S+ +V+ L++ + ++ + PH E + +
Sbjct: 269 --SKKLQVNHEALVNLFTTVKKLGATHIYFPHISAPGAKSSPKTVQAIAEIAEYDKYTAE 326
Query: 253 SIHMPLQSGSSAVLKMMRRGYSKEWFLNRVERLKALVPEVGISTD--------IIVGFPN 304
+ + L+SGS ++ RG W + + ++ GI D + +G+P+
Sbjct: 327 APVVGLESGSERIISKYMRGKPFPWTPH--DWGDVIIDATGIMVDNNIHPCYTMTIGYPD 384
Query: 305 ESDKDFEDTMEVLEKVRFDTLYSFIY 330
E+D+D E+++++++++ L ++I+
Sbjct: 385 ETDEDIEESIKLVQRMIDADLKAWIF 410
>dbj|BAB69397.1| (AB070956) methyltransferase [Streptomyces avermitilis]
Length = 543
Score = 48.5 bits (114), Expect = 2e-04
Identities = 47/229 (20%), Positives = 88/229 (37%), Gaps = 21/229 (9%)
Query: 101 RNVSKISQVIHKEKAV-------EVAIDYDESAYAFEFFEKKA-QIRSLLNISIGCDKKC 152
R++S + VIH + + D D+S+ + F + + + L + C KC
Sbjct: 197 RDISAVDNVIHCTDGMWQLTRRRPESNDLDDSSIDWSGFSPELIGVTAQLRTARSCAFKC 256
Query: 153 AYCIVPHTRGKEISIPMDLILKEAEKLANNGTKELMLLGQNVNNYGARFSSEHAKVDFSD 212
++C P G + +D + KE +A G K ++ + N RF + D
Sbjct: 257 SFCDYPSRAGALAAASVDTVRKELRAMAELGVKNIVFVDDTFNVPPKRFKEICRMMIEED 316
Query: 213 LLDKLSEIQGIERIRFTSPHPLHMNDGFLERFAKNPKVCKSIHMPLQSGSSAVLKMMRRG 272
L + R L G C + + ++SG + +L M +
Sbjct: 317 LGLRWYSYFRCSNARDEEAFDLAAESG-----------CSGVFLGIESGDTEILANMHKL 365
Query: 273 YSKEWFLNRVERLKALVPEVGISTDIIVGFPNESDKDFEDTMEVLEKVR 321
+ +ERL ++ IIVGFP E+ + +T++ L + +
Sbjct: 366 AQDSQYRVGLERLNE--RDITTFASIIVGFPGENARTVSNTVDFLNETK 412
>ref|NP_394365.1| (NC_002578) conserved hypothetical protein [Thermoplasma
acidophilum]
emb|CAC12035.1| (AL445065) conserved hypothetical protein [Thermoplasma
acidophilum]
Length = 538
Score = 46.2 bits (108), Expect = 8e-04
Identities = 44/196 (22%), Positives = 93/196 (47%), Gaps = 26/196 (13%)
Query: 142 LNISIGCDKKCAYC-IVPHTRGKEISIPMDLILKEAEKLANNGTKELMLLGQNVNNYGAR 200
+ I+ GC + C +C I P T SIP++ I+KE + ++G + LL ++ YG
Sbjct: 214 VQITRGCPRGCQFCSITPETFR---SIPIEDIVKEVQLNIDHGITGIELLTDDIMLYG-- 268
Query: 201 FSSEHAKVDFSDLLDKLSEIQGIERIRFTSPH----PLHMNDGFLERFAKNPKVCK---- 252
S+ +V+ L++ + ++ + PH + +E A+ + K
Sbjct: 269 --SKKLQVNHEALVNLFTTVKKMGATHIYFPHISAPGAKSSPKTVEAIAEIAEYDKYPAE 326
Query: 253 SIHMPLQSGSSAVLKMMRRGYSKEWFLNRVERLKALVPEVGISTD--------IIVGFPN 304
+ + L+SGS ++ RG W + + ++ GI D + +G+P+
Sbjct: 327 APVVGLESGSERIISKYMRGKPFPWTPH--DWGDVIIDATGIMVDNHIHPCYTMTIGYPD 384
Query: 305 ESDKDFEDTMEVLEKV 320
E+D+D E++++++E++
Sbjct: 385 ETDEDIEESIKLVERM 400
>ref|NP_614072.1| (NC_003551) Fe-S oxidoreductase family protein [Methanopyrus
kandleri AV19]
gb|AAM02002.1| (AE010370) Fe-S oxidoreductase family protein [Methanopyrus
kandleri AV19]
Length = 402
Score = 45.1 bits (105), Expect = 0.002
Identities = 61/236 (25%), Positives = 102/236 (42%), Gaps = 32/236 (13%)
Query: 142 LNISIGCDKKCAYCIV-----PHTRGKEISIPMDLILKEAEKLANNGTKELMLLGQNVNN 196
+ I+ GC CA+C V P R + + + + + E+ + + + +
Sbjct: 155 VEITRGCPWGCAFCQVTRLFGPKLRHRSVEDVVRWVRRGVERYGHTFAR---FVAPDALA 211
Query: 197 YGARFSSEHAKVDFSDLLDKLSEIQGIERIRFTS------PHPLHMNDGF--LERFAKNP 248
YG+ LL L I+G+E++ F S P + D + +A N
Sbjct: 212 YGSPDGIRLKPDRVKRLLRSLRSIEGLEKVFFGSFPAELRPDSIAKGDAIELIAHYADNE 271
Query: 249 KVCKSIHMPLQSGSSAVLKMMRRGYSKEWFLNRVERLKALVPEVGIS--TDIIVGFPNES 306
+V ++ QSGS VLK + RG++ E VE KAL EVG+ D I G P E+
Sbjct: 272 RV----NIGAQSGSERVLKRIERGHTVEDVEVAVE--KAL--EVGLKPVVDFIFGLPGET 323
Query: 307 DKDFEDTMEVLEKV--RFDTLYSFIYSPRPFTEAGAWKERVPLEVSSSRLERLQNR 360
++D ++E+ + R + + P P T +E PL SS++ R+ R
Sbjct: 324 EEDQLASVELARWIIKRGGEVRLHYFMPLPGTPLEN-EEPAPL---SSKIRRILGR 375
>ref|NP_441949.1| (NC_000911) unknown protein [Synechocystis sp. PCC 6803]
pir||S76041 hypothetical protein - Synechocystis sp. (strain PCC 6803)
dbj|BAA10019.1| (D63999) ORF_ID:slr0320~unknown protein [Synechocystis sp. PCC
6803]
Length = 531
Score = 44.7 bits (104), Expect = 0.002
Identities = 45/195 (23%), Positives = 86/195 (44%), Gaps = 34/195 (17%)
Query: 108 QVIHKEKA--VEVAIDYD--ESAY-AFEFFEKKAQIRSLLNISIGCDKKCAYCIVPHTRG 162
++IH++ + V+ A DYD E + AF+++ ++ + GC C YC+ G
Sbjct: 200 RLIHEQPSPMVKTACDYDYIEQIWPAFDYYLQEDDFYLGVQTKRGCPHNCCYCVYTVVEG 259
Query: 163 KEISI-PMDLILKEAEKLANNGTKELMLLGQNVNNYGARFSSEHAKVDFSDLLDKLSEI- 220
K++ I P ++KE +L + G + A+F A+V D+++ L I
Sbjct: 260 KQVRINPAAEVVKEMRQLYDRGIRNFWFT-------DAQFIP--ARVFIDDVVELLEAIA 310
Query: 221 -QGIERIRFTSPHPLHMNDGFLERFAKNPKVCKSI--------HMPLQSGSSAVLKMMRR 271
G+E I + + ++ P++C+ + + + SGS +++ MR
Sbjct: 311 ASGMEDIHWAA---------YIRADNLTPRLCELMVQTGMNYFEIGITSGSQELVRKMRM 361
Query: 272 GYSKEWFLNRVERLK 286
GY+ L LK
Sbjct: 362 GYNLRTVLQNCRDLK 376
>ref|NP_603060.1| (NC_003454) Oxygen-independent coproporphyrinogen III oxidase
[Fusobacterium nucleatum subsp. nucleatum ATCC 25586]
gb|AAL94359.1| (AE010529) Oxygen-independent coproporphyrinogen III oxidase
[Fusobacterium nucleatum subsp. nucleatum ATCC 25586]
Length = 348
Score = 43.1 bits (100), Expect = 0.006
Identities = 39/177 (22%), Positives = 73/177 (41%), Gaps = 15/177 (8%)
Query: 147 GCDKKCAYCIVPHTRGKEISIPMD----LILKEAEKLANNGTKELMLLGQNVNNYGARFS 202
GC C +C G+E + +D +I + L N K++ G
Sbjct: 14 GCPNACVFCNQKKINGRETDVSLDDLKNIIDSYLKTLPKNSIKQVAFFGGTFTGISMNLQ 73
Query: 203 SEHAKVDFSDLLDKLSEIQGIERIRFTSPHPLHMNDGFLERFAKNPKVCKSIHMPLQSGS 262
E+ +V + K + +E +R S P ++D L + K K+I + +QS
Sbjct: 74 KEYLEV-----VKKYIDNNDVEGVRI-STRPECIDDEILTQLKKYG--VKTIELGIQSLD 125
Query: 263 SAVLKMMRRGYSKEWFLNRVERLKALVPEVGISTDIIVGFPNESDK-DFEDTMEVLE 318
VLK R Y+ + + +K+ E+G+ +++G P K D + ++ L+
Sbjct: 126 DKVLKATGRNYTYDIVKKSCDLIKSYGFELGV--QLMIGLPKSDFKSDLQSAIKSLD 180
Database: /home/scwang/download_20020708_db/nr
Posted date: Aug 7, 2002 12:55 PM
Number of letters in database: 324,149,939
Number of sequences in database: 1,026,957
Lambda K H
0.317 0.134 0.381
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 265,623,717
Number of Sequences: 1026957
Number of extensions: 10883723
Number of successful extensions: 29584
Number of sequences better than 1.0e-02: 171
Number of HSP's better than 0.0 without gapping: 154
Number of HSP's successfully gapped in prelim test: 17
Number of HSP's that attempted gapping in prelim test: 28947
Number of HSP's gapped (non-prelim): 180
length of query: 437
length of database: 324,149,939
effective HSP length: 124
effective length of query: 313
effective length of database: 196,807,271
effective search space: 61600675823
effective search space used: 61600675823
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 99 (42.7 bits)