BLASTP 2.2.1 [Apr-13-2001]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|15644948|ref|NP_207118.1| conserved hypothetical
secreted protein [Helicobacter pylori 26695]
(79 letters)
Database: /home/scwang/download_20020708_db/nr
1,026,957 sequences; 324,149,939 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_207118.1| (NC_000915) conserved hypothetical secrete... 158 1e-38
ref|NP_223023.1| (NC_000921) putative [Helicobacter pylori ... 153 4e-37
ref|NP_282323.1| (NC_002163) hypothetical protein Cj1176c [... 82 1e-15
ref|NP_540001.1| (NC_003317) SEC-INDEPENDENT PROTEIN TRANSL... 73 6e-13
ref|NP_385635.1| (NC_003047) HYPOTHETICAL TRANSMEMBRANE PRO... 67 3e-11
ref|NP_354694.1| (NC_003062) AGR_C_3135p [Agrobacterium tum... 65 1e-10
ref|NP_644517.1| (NC_003919) sec-independent protein transl... 64 3e-10
ref|NP_213037.1| (NC_000918) hypothetical protein [Aquifex ... 64 4e-10
ref|NP_102752.1| (NC_002678) sec-independent protein transl... 64 4e-10
gb|AAL68797.1| (AF461118) TatA [Ralstonia eutropha] 64 4e-10
ref|NP_639432.1| (NC_003902) sec-independent protein transl... 62 1e-09
ref|NP_229745.1| (NC_002505) tatA protein [Vibrio cholerae]... 60 4e-09
ref|NP_662499.1| (NC_002932) Sec-independent protein transl... 60 5e-09
ref|NP_521063.1| (NC_003295) PROBABLE SIGNAL PEPTIDE PROTEI... 60 7e-09
ref|NP_253755.1| (NC_002516) translocation protein TatA [Ps... 60 7e-09
sp|P54079|TATA_MYCLE Sec-independent protein translocase pr... 59 9e-09
ref|NP_301955.1| (NC_002677) possible secreted protein [Myc... 59 9e-09
ref|NP_662401.1| (NC_002932) Sec-independent protein transl... 59 1e-08
ref|NP_457778.1| (NC_003198) sec-independent protein transl... 59 2e-08
sp|P72267|TATA_RHOER Sec-independent protein translocase pr... 58 2e-08
ref|NP_634607.1| (NC_003901) Sec-independent protein transl... 57 3e-08
ref|NP_290468.1| (NC_002655) twin arginine translocation pr... 56 8e-08
emb|CAC29147.1| (AJ299712) TatA protein [Pseudomonas stutzeri] 56 8e-08
ref|NP_216610.1| (NC_000962) hypothetical protein Rv2094c [... 56 8e-08
ref|NP_312793.1| (NC_002695) Sec-independent protein transl... 56 8e-08
ref|NP_336622.1| (NC_002755) conserved hypothetical protein... 56 8e-08
ref|NP_418280.1| (NC_000913) orf, hypothetical protein [Esc... 56 8e-08
ref|NP_618371.1| (NC_003552) mttA/Hcf106 protein [Methanosa... 55 2e-07
ref|NP_297854.1| (NC_002488) conserved hypothetical protein... 55 2e-07
ref|NP_246628.1| (NC_002663) unknown [Pasteurella multocida... 54 3e-07
ref|NP_294529.1| (NC_001263) conserved hypothetical protein... 54 4e-07
ref|NP_213038.1| (NC_000918) hypothetical protein [Aquifex ... 54 5e-07
ref|NP_198227.1| (NM_122758) Tha4 protein - like [Arabidops... 54 5e-07
ref|NP_438355.1| (NC_000907) Sec-independent protein secret... 51 2e-06
pir||B64145 hypothetical protein HI0187 - Haemophilus influ... 51 2e-06
gb|AAA92108.1| (U48404) ORF4 [Azotobacter chroococcum] 51 3e-06
ref|NP_273645.1| (NC_003112) conserved hypothetical protein... 51 3e-06
ref|NP_070880.1| (NC_000917) conserved hypothetical protein... 50 4e-06
sp|P95557|TATA_PSEST Sec-independent protein translocase pr... 49 9e-06
ref|NP_440350.1| (NC_000911) hypothetical protein [Synechoc... 48 2e-05
ref|NP_484888.1| (NC_003272) hypothetical protein [Nostoc s... 48 3e-05
pir||S30727 hypothetical protein o261 - Escherichia coli 48 3e-05
gb|AAD33943.1|AF144708_1 (AF144708) Tha4 protein [Pisum sat... 48 3e-05
gb|AAA67633.1| (M87049) o261 [Escherichia coli] 48 3e-05
ref|NP_286353.1| (NC_002655) orf, hypothetical protein [Esc... 47 4e-05
ref|NP_394680.1| (NC_002578) Sec-independent protein secret... 47 4e-05
ref|NP_360797.1| (NC_003103) unknown [Rickettsia conorii] >... 47 6e-05
ref|NP_221101.1| (NC_000963) unknown [Rickettsia prowazekii... 47 6e-05
ref|NP_656107.1| (NC_003995) MttA_Hcf106, mttA/Hcf106 famil... 47 6e-05
gb|AAA24073.1| (M82805) ORF; putative [Escherichia coli] 46 8e-05
ref|NP_559370.1| (NC_003364) conserved hypothetical protein... 46 1e-04
ref|NP_241418.1| (NC_002570) BH0552~unknown conserved prote... 45 2e-04
ref|NP_294015.1| (NC_001263) conserved hypothetical protein... 45 2e-04
ref|NP_634608.1| (NC_003901) Sec-independent protein transl... 45 2e-04
ref|NP_342013.1| (NC_002754) Conserved hypothetical protein... 45 2e-04
ref|NP_370871.1| (NC_002758) conserved hypothetical protein... 45 2e-04
ref|NP_279784.1| (NC_002607) Vng0801c [Halobacterium sp. NR... 45 2e-04
ref|NP_625908.1| (NC_003888) putative secreted protein [Str... 45 2e-04
ref|NP_455208.1| (NC_003198) sec-independent protein transl... 45 2e-04
gb|AAD31523.1|AF145756_1 (AF145756) THA9 [Zea mays] 44 3e-04
ref|NP_600707.1| (NC_003450) COG1826:Sec-independent protei... 44 3e-04
ref|NP_388479.1| (NC_000964) ydiI [Bacillus subtilis] >gi|7... 44 4e-04
ref|NP_110890.1| (NC_002689) Predicted Sec-independent prot... 44 5e-04
dbj|BAB59517.1| (AP000992) hypothetical protein [Thermoplas... 44 5e-04
ref|NP_407225.1| (NC_003143) Sec-independent protein transl... 44 5e-04
gb|AAD31522.1|AF145755_1 (AF145755) THA4 [Zea mays] 43 7e-04
ref|NP_376485.1| (NC_003106) 94aa long conserved hypothetic... 43 7e-04
ref|NP_406123.1| (NC_003143) sec-independent protein transl... 43 9e-04
ref|NP_148411.1| (NC_000854) Sec-independent protein secret... 42 0.001
ref|NP_614484.1| (NC_003551) Sec-independent protein secret... 42 0.001
ref|NP_487918.1| (NC_003272) hypothetical protein [Nostoc s... 41 0.003
ref|NP_148420.1| (NC_000854) Sec-independent protein secret... 41 0.003
ref|NP_602245.1| (NC_003450) COG1826:Sec-independent protei... 40 0.004
ref|NP_420810.1| (NC_002696) conserved hypothetical protein... 40 0.004
ref|NP_378613.1| (NC_003106) 93aa long conserved hypothetic... 40 0.007
emb|CAC34414.1| (AJ276399) putative TatA protein [Legionell... 39 0.010
ref|NP_469726.1| (NC_003212) similar to conserved hypotheti... 39 0.010
>ref|NP_207118.1| (NC_000915) conserved hypothetical secreted protein [Helicobacter
pylori 26695]
sp|O25088|TATA_HELPY Sec-independent protein translocase protein tatA/E homolog
pir||H64559 conserved hypothetical secreted protein HP0320 - Helicobacter
pylori (strain 26695)
gb|AAD07397.1| (AE000550) conserved hypothetical secreted protein [Helicobacter
pylori 26695]
Length = 79
Score = 158 bits (400), Expect = 1e-38
Identities = 79/79 (100%), Positives = 79/79 (100%)
Query: 1 MGGFTSIWHWVIVLLVIVLLFGAKKIPELAKGLGSGIKNFKKAVKDDEEEAKNEPKTLDA 60
MGGFTSIWHWVIVLLVIVLLFGAKKIPELAKGLGSGIKNFKKAVKDDEEEAKNEPKTLDA
Sbjct: 1 MGGFTSIWHWVIVLLVIVLLFGAKKIPELAKGLGSGIKNFKKAVKDDEEEAKNEPKTLDA 60
Query: 61 QATQTKVHESSEIKSKQES 79
QATQTKVHESSEIKSKQES
Sbjct: 61 QATQTKVHESSEIKSKQES 79
>ref|NP_223023.1| (NC_000921) putative [Helicobacter pylori J99]
sp|Q9ZMB8|TATA_HELPJ Sec-independent protein translocase protein tatA/E homolog
pir||A71948 hypothetical protein jhp0303 - Helicobacter pylori (strain J99)
gb|AAD05888.1| (AE001467) putative [Helicobacter pylori J99]
Length = 79
Score = 153 bits (387), Expect = 4e-37
Identities = 77/79 (97%), Positives = 78/79 (98%)
Query: 1 MGGFTSIWHWVIVLLVIVLLFGAKKIPELAKGLGSGIKNFKKAVKDDEEEAKNEPKTLDA 60
MGGFTSIWHWVIVLLVIVLLFGAKKIPELAKGLGSGIKNFKKAVKDDEEEAKNE KTLDA
Sbjct: 1 MGGFTSIWHWVIVLLVIVLLFGAKKIPELAKGLGSGIKNFKKAVKDDEEEAKNELKTLDA 60
Query: 61 QATQTKVHESSEIKSKQES 79
QATQTKVHE+SEIKSKQES
Sbjct: 61 QATQTKVHETSEIKSKQES 79
>ref|NP_282323.1| (NC_002163) hypothetical protein Cj1176c [Campylobacter jejuni]
sp|Q9PNB9|TATA_CAMJE Sec-independent protein translocase protein tatA/E homolog
pir||B81323 hypothetical protein Cj1176c [imported] - Campylobacter jejuni
(strain NCTC 11168)
emb|CAB73430.1| (AL139077) hypothetical protein Cj1176c [Campylobacter jejuni]
Length = 79
Score = 82.0 bits (201), Expect = 1e-15
Identities = 39/79 (49%), Positives = 55/79 (69%)
Query: 1 MGGFTSIWHWVIVLLVIVLLFGAKKIPELAKGLGSGIKNFKKAVKDDEEEAKNEPKTLDA 60
MGG++S HW+I+LL++VLLFGAKKIPELAKGLG GIK FK + +D+E AKN K +
Sbjct: 1 MGGWSSPSHWLIILLIVVLLFGAKKIPELAKGLGKGIKTFKDEMNNDDEVAKNTQKIEEN 60
Query: 61 QATQTKVHESSEIKSKQES 79
+ T + + I +++
Sbjct: 61 KNTTNNTNADASIDETKKA 79
>ref|NP_540001.1| (NC_003317) SEC-INDEPENDENT PROTEIN TRANSLOCASE PROTEIN TATA
[Brucella melitensis]
gb|AAL52265.1| (AE009548) SEC-INDEPENDENT PROTEIN TRANSLOCASE PROTEIN TATA
[Brucella melitensis]
Length = 72
Score = 73.2 bits (178), Expect = 6e-13
Identities = 36/64 (56%), Positives = 48/64 (74%), Gaps = 3/64 (4%)
Query: 1 MGGFTSIWHWVIVLLVIVLLFGAKKIPELAKGLGSGIKNFKKAVKDDEEEAKNEPKTLDA 60
MG F SIWHW+IVL V++LLFG KIPEL + GIKNFK+ + D E+AK +P+T+DA
Sbjct: 1 MGSF-SIWHWLIVLAVVLLLFGRGKIPELMGDVAKGIKNFKQGMAD--EDAKEDPRTIDA 57
Query: 61 QATQ 64
+A +
Sbjct: 58 KAEE 61
>ref|NP_385635.1| (NC_003047) HYPOTHETICAL TRANSMEMBRANE PROTEIN [Sinorhizobium
meliloti]
emb|CAC46108.1| (AL591787) HYPOTHETICAL TRANSMEMBRANE PROTEIN [Sinorhizobium
meliloti]
Length = 68
Score = 67.4 bits (163), Expect = 3e-11
Identities = 37/74 (50%), Positives = 49/74 (66%), Gaps = 6/74 (8%)
Query: 1 MGGFTSIWHWVIVLLVIVLLFGAKKIPELAKGLGSGIKNFKKAVKDDEEEAKNEPKTLDA 60
MG F SIWHW+IVL V++LLFG KIPEL + GIKNFKK + DD E + K++D
Sbjct: 1 MGSF-SIWHWLIVLAVVLLLFGRGKIPELMGDVAKGIKNFKKGMGDD--EVASADKSVDG 57
Query: 61 QATQTKVHESSEIK 74
+T H+S E++
Sbjct: 58 ---KTVDHKSDEVR 68
>ref|NP_354694.1| (NC_003062) AGR_C_3135p [Agrobacterium tumefaciens]
[Agrobacterium tumefaciens str. C58 (Cereon)]
ref|NP_532390.1| (NC_003304) SEC-independent protein translocase protein
[Agrobacterium tumefaciens str. C58 (U. Washington)]
gb|AAK87479.1| (AE008092) AGR_C_3135p [Agrobacterium tumefaciens str. C58
(Cereon)]
gb|AAL42706.1| (AE009127) SEC-independent protein translocase protein
[Agrobacterium tumefaciens str. C58 (U. Washington)]
Length = 70
Score = 65.5 bits (158), Expect = 1e-10
Identities = 34/75 (45%), Positives = 50/75 (66%), Gaps = 6/75 (8%)
Query: 1 MGGFTSIWHWVIVLLVIVLLFGAKKIPELAKGLGSGIKNFKKAVKDDEEEAKNEPKTLDA 60
MG F S+WHW+IVL+++++LFG KIPEL + GIK+FKK + D+++ P DA
Sbjct: 1 MGSF-SVWHWLIVLVIVLVLFGRGKIPELMGDVAKGIKSFKKGMADEDQ----TPPPADA 55
Query: 61 QA-TQTKVHESSEIK 74
A +T H++ EIK
Sbjct: 56 NANAKTVDHKADEIK 70
>ref|NP_644517.1| (NC_003919) sec-independent protein translocase [Xanthomonas
axonopodis pv. citri str. 306]
gb|AAM39053.1| (AE012074) sec-independent protein translocase [Xanthomonas
axonopodis pv. citri str. 306]
Length = 75
Score = 64.3 bits (155), Expect = 3e-10
Identities = 28/51 (54%), Positives = 40/51 (77%), Gaps = 1/51 (1%)
Query: 1 MGGFTSIWHWVIVLLVIVLLFGAKKIPELAKGLGSGIKNFKKAVKDDEEEA 51
MGGF SIWHW+IVL++++L+FG K++ AK LGS +K FKK + DD++ A
Sbjct: 1 MGGF-SIWHWLIVLVIVLLVFGTKRLTSGAKDLGSAVKEFKKGMHDDDKPA 50
>ref|NP_213037.1| (NC_000918) hypothetical protein [Aquifex aeolicus]
sp|O66477|TAT2_AQUAE Sec-independent protein translocase tatA/E-like protein 2
pir||B70306 conserved hypothetical protein aq_064b - Aquifex aeolicus
gb|AAC06450.1| (AE000672) hypothetical protein [Aquifex aeolicus]
Length = 59
Score = 63.9 bits (154), Expect = 4e-10
Identities = 27/49 (55%), Positives = 38/49 (77%)
Query: 8 WHWVIVLLVIVLLFGAKKIPELAKGLGSGIKNFKKAVKDDEEEAKNEPK 56
W +++LLVI+++FGA K+PE+ KGLG GI+NFKKA+ +EEE E K
Sbjct: 7 WQLILILLVILVIFGASKLPEVGKGLGEGIRNFKKALSGEEEEKGKEVK 55
>ref|NP_102752.1| (NC_002678) sec-independent protein translocase protein tatA/E
[Mesorhizobium loti]
dbj|BAB48538.1| (AP002996) sec-independent protein translocase protein TatA/E
[Mesorhizobium loti]
Length = 73
Score = 63.9 bits (154), Expect = 4e-10
Identities = 30/65 (46%), Positives = 47/65 (72%), Gaps = 3/65 (4%)
Query: 1 MGGFTSIWHWVIVLLVIVLLFGAKKIPELAKGLGSGIKNFKKAVKDDEEEAKNEPKTLDA 60
MG F SIWHW+IVL++++L+FG KIPEL + GIK+FKK + DD + ++ +T++
Sbjct: 1 MGSF-SIWHWMIVLVIVLLVFGRGKIPELMGDMAKGIKSFKKGMADD--DVADDKRTVEH 57
Query: 61 QATQT 65
+A +T
Sbjct: 58 RADET 62
>gb|AAL68797.1| (AF461118) TatA [Ralstonia eutropha]
Length = 77
Score = 63.9 bits (154), Expect = 4e-10
Identities = 29/78 (37%), Positives = 48/78 (61%), Gaps = 1/78 (1%)
Query: 1 MGGFTSIWHWVIVLLVIVLLFGAKKIPELAKGLGSGIKNFKKAVKDDEEEAKNEPKTLDA 60
MG F SIWHW+IVL++++L+FG KK+ + + LG +K FK +KD E +A +P
Sbjct: 1 MGSF-SIWHWLIVLVIVMLVFGTKKLRNIGQDLGGAVKGFKDGMKDGEGKAAADPAQSKE 59
Query: 61 QATQTKVHESSEIKSKQE 78
T + ++ K++Q+
Sbjct: 60 LRDSTTIDVEAKEKTRQQ 77
>ref|NP_639432.1| (NC_003902) sec-independent protein translocase [Xanthomonas
campestris pv. campestris str. ATCC 33913]
gb|AAM43314.1| (AE012532) sec-independent protein translocase [Xanthomonas
campestris pv. campestris str. ATCC 33913]
Length = 75
Score = 62.0 bits (149), Expect = 1e-09
Identities = 27/51 (52%), Positives = 39/51 (75%), Gaps = 1/51 (1%)
Query: 1 MGGFTSIWHWVIVLLVIVLLFGAKKIPELAKGLGSGIKNFKKAVKDDEEEA 51
MG F SIWHW+IVL++++L+FG K++ AK LGS +K FKK + DD++ A
Sbjct: 1 MGSF-SIWHWLIVLVIVLLVFGTKRLTSGAKDLGSAVKEFKKGMHDDDKPA 50
>ref|NP_229745.1| (NC_002505) tatA protein [Vibrio cholerae]
sp|P57051|TATA_VIBCH Sec-independent protein translocase protein tatA/E homolog
pir||G82366 tatA protein VC0086 [imported] - Vibrio cholerae (group O1 strain
N16961)
gb|AAF93264.1| (AE004099) tatA protein [Vibrio cholerae]
Length = 82
Score = 60.5 bits (145), Expect = 4e-09
Identities = 31/81 (38%), Positives = 48/81 (58%), Gaps = 4/81 (4%)
Query: 1 MGGFTSIWHWVIVLLVIVLLFGAKKIPELAKGLGSGIKNFKKAVKDDEEEAKNEPKTLDA 60
MGG SIW +I+ +++VLLFG KK+ + LGS +K FKKA+ ++E + K D
Sbjct: 1 MGGI-SIWQLLIIAVIVVLLFGTKKLRGIGSDLGSAVKGFKKAMSEEESNSAANQKDADF 59
Query: 61 QA---TQTKVHESSEIKSKQE 78
+ Q K + S+E+K +E
Sbjct: 60 ETKNLEQAKTNASAEVKKDKE 80
>ref|NP_662499.1| (NC_002932) Sec-independent protein translocase protein TatE,
putative [Chlorobium tepidum TLS]
gb|AAM72841.1| (AE012916) Sec-independent protein translocase protein TatE,
putative [Chlorobium tepidum TLS]
Length = 67
Score = 60.1 bits (144), Expect = 5e-09
Identities = 27/40 (67%), Positives = 35/40 (87%)
Query: 11 VIVLLVIVLLFGAKKIPELAKGLGSGIKNFKKAVKDDEEE 50
V++LL+++LLFGA+K+PELAKGLG GIK FKKA + EEE
Sbjct: 10 VLILLIVLLLFGAQKLPELAKGLGKGIKEFKKAQNEIEEE 49
>ref|NP_521063.1| (NC_003295) PROBABLE SIGNAL PEPTIDE PROTEIN [Ralstonia
solanacearum]
emb|CAD16649.1| (AL646072) PROBABLE SIGNAL PEPTIDE PROTEIN [Ralstonia
solanacearum]
Length = 85
Score = 59.7 bits (143), Expect = 7e-09
Identities = 33/85 (38%), Positives = 52/85 (60%), Gaps = 9/85 (10%)
Query: 1 MGGFTSIWHWVIVLLVIVLLFGAKKIPELAKGLGSGIKNFKKAVKDDEEE--AKNEPKTL 58
MG F SIWHW+IVLL+I+++FG KK+ + LGS +K FK+ +++ E+ A ++
Sbjct: 1 MGSF-SIWHWLIVLLIIMMVFGTKKLRNIGSDLGSAVKGFKEGMREGSEDKPAGSQQGQQ 59
Query: 59 DAQATQTKVHESSEI------KSKQ 77
A ++H+S+ I KSKQ
Sbjct: 60 AAGQPPRELHDSTTIDVEARDKSKQ 84
>ref|NP_253755.1| (NC_002516) translocation protein TatA [Pseudomonas aeruginosa]
pir||G83011 translocation protein TatA PA5068 [imported] - Pseudomonas
aeruginosa (strain PAO1)
gb|AAG08453.1|AE004920_3 (AE004920) translocation protein TatA [Pseudomonas aeruginosa]
Length = 82
Score = 59.7 bits (143), Expect = 7e-09
Identities = 26/69 (37%), Positives = 43/69 (61%), Gaps = 11/69 (15%)
Query: 9 HWVIVLLVIVLLFGAKKIPELAKGLGSGIKNFKKAVKDDEEEAK-----------NEPKT 57
HW+++L+V+VL+FG K++ L +G IK F+KAV +E++ K N+P T
Sbjct: 8 HWIVILIVVVLVFGTKRLKNLGSDVGEAIKGFRKAVNTEEDDKKDQPAAQPAQPLNQPHT 67
Query: 58 LDAQATQTK 66
+DAQA + +
Sbjct: 68 IDAQAQKVE 76
>sp|P54079|TATA_MYCLE Sec-independent protein translocase protein tatA/E homolog
pir||S72850 hypothetical protein B2126_C1_182 - Mycobacterium leprae
gb|AAA17190.1| (U00017) u2126b; B2126_C1_182 [Mycobacterium leprae]
emb|CAA22941.1| (AL035310) hypothetical protein MLCB2533.27 [Mycobacterium
leprae]
Length = 88
Score = 59.3 bits (142), Expect = 9e-09
Identities = 25/71 (35%), Positives = 44/71 (61%)
Query: 3 GFTSIWHWVIVLLVIVLLFGAKKIPELAKGLGSGIKNFKKAVKDDEEEAKNEPKTLDAQA 62
G S WHWV++++V+VLLFGAKK+P+ A+ LG ++ FK +++ + E + + L+
Sbjct: 2 GSLSPWHWVVLVVVVVLLFGAKKLPDAARSLGKSMRIFKSELREMQTENQAQASALETPM 61
Query: 63 TQTKVHESSEI 73
V +S +
Sbjct: 62 QNPTVVQSQRV 72
>ref|NP_301955.1| (NC_002677) possible secreted protein [Mycobacterium leprae]
emb|CAC31712.1| (AL583921) possible secreted protein [Mycobacterium leprae]
Length = 95
Score = 59.3 bits (142), Expect = 9e-09
Identities = 25/71 (35%), Positives = 44/71 (61%)
Query: 3 GFTSIWHWVIVLLVIVLLFGAKKIPELAKGLGSGIKNFKKAVKDDEEEAKNEPKTLDAQA 62
G S WHWV++++V+VLLFGAKK+P+ A+ LG ++ FK +++ + E + + L+
Sbjct: 9 GSLSPWHWVVLVVVVVLLFGAKKLPDAARSLGKSMRIFKSELREMQTENQAQASALETPM 68
Query: 63 TQTKVHESSEI 73
V +S +
Sbjct: 69 QNPTVVQSQRV 79
>ref|NP_662401.1| (NC_002932) Sec-independent protein translocase protein TatA,
putative [Chlorobium tepidum TLS]
gb|AAM72743.1| (AE012908) Sec-independent protein translocase protein TatA,
putative [Chlorobium tepidum TLS]
Length = 70
Score = 58.9 bits (141), Expect = 1e-08
Identities = 33/65 (50%), Positives = 43/65 (65%), Gaps = 3/65 (4%)
Query: 11 VIVLLVIVLLFGAKKIPELAKGLGSGIKNFKKAVKDDEEEAKNEPKTLDAQATQTKVHES 70
+++L+VI++LFG +KIPELA+GLG GIK FKKA D E E K +D + K S
Sbjct: 9 LLILVVILILFGGQKIPELARGLGKGIKEFKKAQADIESEFH---KAVDGVSDTVKQAGS 65
Query: 71 SEIKS 75
SE KS
Sbjct: 66 SEKKS 70
>ref|NP_457778.1| (NC_003198) sec-independent protein translocase protein
[Salmonella enterica subsp. enterica serovar Typhi]
ref|NP_462858.1| (NC_003197) component of Sec-independent protein secretion
pathway [Salmonella typhimurium LT2]
sp|P57045|TATA_SALTY Sec-independent protein translocase protein tatA
gb|AAF33419.1| (AF233324) 83% identity with amino acids 10-79 of E. coli
hypothetical protein (YIGT) (SP:P27856) [Salmonella
typhimurium LT2]
gb|AAL22817.1| (AE008885) component of Sec-independent protein secretion pathway
[Salmonella typhimurium LT2]
emb|CAD07919.1| (AL627278) sec-independent protein translocase protein
[Salmonella enterica subsp. enterica serovar Typhi]
Length = 84
Score = 58.5 bits (140), Expect = 2e-08
Identities = 31/79 (39%), Positives = 47/79 (59%), Gaps = 3/79 (3%)
Query: 1 MGGFTSIWHWVIVLLVIVLLFGAKKIPELAKGLGSGIKNFKKAVKDDEEEAKNEPKTLDA 60
MGG SIW +IV +++VLLFG KK+ + LG+ IK FKKA+ DD +AK + + DA
Sbjct: 1 MGGI-SIWQLLIVAVIVVLLFGTKKLGSIGSDLGASIKGFKKAMSDD--DAKQDKTSQDA 57
Query: 61 QATQTKVHESSEIKSKQES 79
T + + K+++
Sbjct: 58 DFTAKSIADKQGEAKKEDA 76
>sp|P72267|TATA_RHOER Sec-independent protein translocase protein tatA/E homolog
emb|CAB04766.1| (Z82004) ORF13(1) [Rhodococcus erythropolis]
Length = 98
Score = 58.2 bits (139), Expect = 2e-08
Identities = 24/48 (50%), Positives = 35/48 (72%)
Query: 3 GFTSIWHWVIVLLVIVLLFGAKKIPELAKGLGSGIKNFKKAVKDDEEE 50
G S WHW IV LV+V+LFG+KK+P+ A+GLG ++ FK VK+ + +
Sbjct: 2 GAMSPWHWAIVALVVVILFGSKKLPDAARGLGRSLRIFKSEVKEMQND 49
>ref|NP_634607.1| (NC_003901) Sec-independent protein translocase, protein
[Methanosarcina mazei Goe1]
gb|AAM32279.1| (AE013502) Sec-independent protein translocase, protein
[Methanosarcina mazei Goe1]
Length = 101
Score = 57.4 bits (137), Expect = 3e-08
Identities = 30/63 (47%), Positives = 43/63 (67%), Gaps = 1/63 (1%)
Query: 11 VIVLLVIVLLFGAKKIPELAKGLGSGIKNFKKAVKDDEEEAKNEPKTLDAQA-TQTKVHE 69
+++ VIVLLFGA K+PELA+ +GS + FKKA K+ E+ K K+L A +TKV E
Sbjct: 8 IMIFGVIVLLFGAAKLPELARSMGSSVGEFKKAQKESEKSLKEFEKSLTEPAPAKTKVQE 67
Query: 70 SSE 72
++E
Sbjct: 68 TAE 70
>ref|NP_290468.1| (NC_002655) twin arginine translocation protein; sec-independent
protein export [Escherichia coli O157:H7 EDL933]
gb|AAG59032.1|AE005614_12 (AE005614) twin arginine translocation protein; sec-independent
protein export [Escherichia coli O157:H7 EDL933]
Length = 103
Score = 56.2 bits (134), Expect = 8e-08
Identities = 29/80 (36%), Positives = 49/80 (61%), Gaps = 3/80 (3%)
Query: 1 MGGFTSIWHWVIVLLVIVLLFGAKKIPELAKGLGSGIKNFKKAVKDDE--EEAKNEPKTL 58
MGG SIW +I+ +++VLLFG KK+ + LG+ IK FKKA+ DDE ++ ++
Sbjct: 15 MGGI-SIWQLLIIAVIVVLLFGTKKLGSIGSDLGASIKGFKKAMSDDEPKQDKTSQDADF 73
Query: 59 DAQATQTKVHESSEIKSKQE 78
A+ K ++++ ++K E
Sbjct: 74 TAKTIADKQADTNQEQAKTE 93
>emb|CAC29147.1| (AJ299712) TatA protein [Pseudomonas stutzeri]
Length = 76
Score = 56.2 bits (134), Expect = 8e-08
Identities = 27/67 (40%), Positives = 43/67 (63%), Gaps = 3/67 (4%)
Query: 3 GFTSIWHWVIVLLVIVLLFGAKKIPELAKGLGSGIKNFKKAVKDDEEEAKNEPK---TLD 59
G SIW +I+LL++++LFG K++ + LG IK F+K++ DEE+ E K T+D
Sbjct: 4 GGISIWQLLIILLIVIMLFGTKRLKGVGSDLGDAIKGFRKSMGTDEEKPSVEEKQNHTID 63
Query: 60 AQATQTK 66
AQA + +
Sbjct: 64 AQARKVE 70
>ref|NP_216610.1| (NC_000962) hypothetical protein Rv2094c [Mycobacterium
tuberculosis H37Rv]
sp|Q10703|TATA_MYCTU Sec-independent protein translocase protein tatA/E homolog
pir||A70768 hypothetical protein Rv2094c - Mycobacterium tuberculosis
(strain H37RV)
emb|CAA98206.1| (Z73966) hypothetical protein Rv2094c [Mycobacterium tuberculosis
H37Rv]
Length = 83
Score = 56.2 bits (134), Expect = 8e-08
Identities = 23/52 (44%), Positives = 36/52 (69%)
Query: 3 GFTSIWHWVIVLLVIVLLFGAKKIPELAKGLGSGIKNFKKAVKDDEEEAKNE 54
G S WHW I+ +V+++LFGAKK+P+ A+ LG ++ FK V++ + E K E
Sbjct: 2 GSLSPWHWAILAVVVIVLFGAKKLPDAARSLGKSLRIFKSEVRELQNENKAE 53
>ref|NP_312793.1| (NC_002695) Sec-independent protein translocase [Escherichia coli
O157:H7]
sp|O65938|TATA_ECOLI Sec-independent protein translocase protein tatA
emb|CAA06724.1| (AJ005830) TatA protein [Escherichia coli]
dbj|BAB38189.1| (AP002567) Sec-independent protein translocase [Escherichia coli
O157:H7]
Length = 89
Score = 56.2 bits (134), Expect = 8e-08
Identities = 29/80 (36%), Positives = 49/80 (61%), Gaps = 3/80 (3%)
Query: 1 MGGFTSIWHWVIVLLVIVLLFGAKKIPELAKGLGSGIKNFKKAVKDDE--EEAKNEPKTL 58
MGG SIW +I+ +++VLLFG KK+ + LG+ IK FKKA+ DDE ++ ++
Sbjct: 1 MGGI-SIWQLLIIAVIVVLLFGTKKLGSIGSDLGASIKGFKKAMSDDEPKQDKTSQDADF 59
Query: 59 DAQATQTKVHESSEIKSKQE 78
A+ K ++++ ++K E
Sbjct: 60 TAKTIADKQADTNQEQAKTE 79
>ref|NP_336622.1| (NC_002755) conserved hypothetical protein [Mycobacterium
tuberculosis CDC1551]
gb|AAK46436.1| (AE007065) conserved hypothetical protein [Mycobacterium
tuberculosis CDC1551]
Length = 115
Score = 56.2 bits (134), Expect = 8e-08
Identities = 23/52 (44%), Positives = 36/52 (69%)
Query: 3 GFTSIWHWVIVLLVIVLLFGAKKIPELAKGLGSGIKNFKKAVKDDEEEAKNE 54
G S WHW I+ +V+++LFGAKK+P+ A+ LG ++ FK V++ + E K E
Sbjct: 34 GSLSPWHWAILAVVVIVLFGAKKLPDAARSLGKSLRIFKSEVRELQNENKAE 85
>ref|NP_418280.1| (NC_000913) orf, hypothetical protein [Escherichia coli K12]
pir||E65188 hypothetical 11.3 kD protein in udp-rfaH intergenic region -
Escherichia coli (strain K-12)
gb|AAC76839.1| (AE000459) orf, hypothetical protein [Escherichia coli K12]
gb|AAC19240.1| (AF067848) MttA1 [Escherichia coli]
Length = 103
Score = 56.2 bits (134), Expect = 8e-08
Identities = 29/80 (36%), Positives = 49/80 (61%), Gaps = 3/80 (3%)
Query: 1 MGGFTSIWHWVIVLLVIVLLFGAKKIPELAKGLGSGIKNFKKAVKDDE--EEAKNEPKTL 58
MGG SIW +I+ +++VLLFG KK+ + LG+ IK FKKA+ DDE ++ ++
Sbjct: 15 MGGI-SIWQLLIIAVIVVLLFGTKKLGSIGSDLGASIKGFKKAMSDDEPKQDKTSQDADF 73
Query: 59 DAQATQTKVHESSEIKSKQE 78
A+ K ++++ ++K E
Sbjct: 74 TAKTIADKQADTNQEQAKTE 93
>ref|NP_618371.1| (NC_003552) mttA/Hcf106 protein [Methanosarcina acetivorans str.
C2A] [Methanosarcina acetivorans C2A]
gb|AAM06851.1| (AE011056) mttA/Hcf106 protein [Methanosarcina acetivorans str.
C2A] [Methanosarcina acetivorans C2A]
Length = 121
Score = 55.1 bits (131), Expect = 2e-07
Identities = 31/84 (36%), Positives = 49/84 (57%), Gaps = 6/84 (7%)
Query: 1 MGGFTSIWHWVIVLLVIVLLFGAKKIPELAKGLGSGIKNFKKAVKDDEEEAKNEPKTLDA 60
M G + + + +LLFGA K+PELA+ +GS + FKKA ++ E+ K+ K+L
Sbjct: 18 MVGMPGPMELMFIFAIAILLFGASKLPELARSMGSSVGEFKKAQRESEQNLKDFEKSLKE 77
Query: 61 QAT-QTKVHESS-----EIKSKQE 78
T +TKV E++ +IKSK +
Sbjct: 78 PITPKTKVQETATKLGIDIKSKTD 101
>ref|NP_297854.1| (NC_002488) conserved hypothetical protein [Xylella fastidiosa
9a5c]
sp|Q9PFU3|TATA_XYLFA Sec-independent protein translocase protein tatA/E homolog
pir||B82791 conserved hypothetical protein XF0564 [imported] - Xylella
fastidiosa (strain 9a5c)
gb|AAF83374.1|AE003903_10 (AE003903) conserved hypothetical protein [Xylella fastidiosa
9a5c]
Length = 71
Score = 54.7 bits (130), Expect = 2e-07
Identities = 24/63 (38%), Positives = 43/63 (68%), Gaps = 1/63 (1%)
Query: 1 MGGFTSIWHWVIVLLVIVLLFGAKKIPELAKGLGSGIKNFKKAVKDDEEEAKNEPKTLDA 60
MG F S+ HW++VL++++L+FG K++ AK +GS IK FKK++++D++ T +
Sbjct: 1 MGSF-SLLHWLVVLVIVLLVFGTKRLANGAKDIGSAIKEFKKSLREDDKPTDQLGSTSQS 59
Query: 61 QAT 63
A+
Sbjct: 60 TAS 62
>ref|NP_246628.1| (NC_002663) unknown [Pasteurella multocida]
gb|AAK03773.1| (AE006205) unknown [Pasteurella multocida]
Length = 76
Score = 54.3 bits (129), Expect = 3e-07
Identities = 30/76 (39%), Positives = 44/76 (57%), Gaps = 1/76 (1%)
Query: 1 MGGFTSIWHWVIVLLVIVLLFGAKKIPELAKGLGSGIKNFKKAVKDDEEEAKNEPKTLDA 60
MGG SI +I++ ++VLLFG KK+ L LG +K FKKA+ DD +E E K+L
Sbjct: 1 MGGI-SITQLLIIVAIVVLLFGTKKLRTLGSDLGESVKGFKKAMADDNKEKDAEFKSLSD 59
Query: 61 QATQTKVHESSEIKSK 76
+ T E ++ K +
Sbjct: 60 DSETTAKTEKAKDKEQ 75
>ref|NP_294529.1| (NC_001263) conserved hypothetical protein [Deinococcus
radiodurans]
pir||B75473 conserved hypothetical protein - Deinococcus radiodurans (strain
R1)
gb|AAF10383.1|AE001935_2 (AE001935) conserved hypothetical protein [Deinococcus
radiodurans]
Length = 132
Score = 53.9 bits (128), Expect = 4e-07
Identities = 23/36 (63%), Positives = 30/36 (82%)
Query: 11 VIVLLVIVLLFGAKKIPELAKGLGSGIKNFKKAVKD 46
+++L+VI LLFGAKK+PEL KG+G GI+ FK VKD
Sbjct: 35 ILILVVIALLFGAKKLPELMKGMGQGIREFKNEVKD 70
>ref|NP_213038.1| (NC_000918) hypothetical protein [Aquifex aeolicus]
sp|O66478|TAT1_AQUAE Sec-independent protein translocase tatA/E-like protein 1
pir||C70306 conserved hypothetical protein aq_064c - Aquifex aeolicus
gb|AAC06451.1| (AE000672) hypothetical protein [Aquifex aeolicus]
Length = 77
Score = 53.5 bits (127), Expect = 5e-07
Identities = 31/77 (40%), Positives = 46/77 (59%), Gaps = 3/77 (3%)
Query: 3 GFTSIWHWVIVLLVIVLLFGAKKIPELAKGLGSGIKNFKKAVKDDEEEAKNEPKTLDAQA 62
G S+ +I+L VI+LLFGA ++PE + LG GI+NF+KA+ + E E K D +
Sbjct: 4 GGISMTELIIILAVILLLFGAGRLPEAGRALGEGIRNFRKALSGETE--VKEVKAEDVK- 60
Query: 63 TQTKVHESSEIKSKQES 79
T+ + E E K K E+
Sbjct: 61 TEERKEEKKEEKEKVEA 77
>ref|NP_198227.1| (NM_122758) Tha4 protein - like [Arabidopsis thaliana]
gb|AAF67362.1| (AF262041) Hypothetical protein T32B20.e [Arabidopsis thaliana]
gb|AAG40358.1|AF325006_1 (AF325006) AT5g28750 [Arabidopsis thaliana]
gb|AAL07125.1| (AY056276) putative Tha4 protein [Arabidopsis thaliana]
gb|AAM14368.1| (AY091429) putative Tha4 protein [Arabidopsis thaliana]
Length = 147
Score = 53.5 bits (127), Expect = 5e-07
Identities = 25/68 (36%), Positives = 40/68 (58%)
Query: 12 IVLLVIVLLFGAKKIPELAKGLGSGIKNFKKAVKDDEEEAKNEPKTLDAQATQTKVHESS 71
++ V LLFG KK+PE+ K +G +K+F++A K+ E E K EP+ A+++Q
Sbjct: 73 VIAGVAALLFGPKKLPEIGKSIGKTVKSFQQAAKEFESELKTEPEESVAESSQVATSNKE 132
Query: 72 EIKSKQES 79
E K + S
Sbjct: 133 EEKKTEVS 140
>ref|NP_438355.1| (NC_000907) Sec-independent protein secretion pathway, TatA
component [Haemophilus influenzae Rd]
sp|P57046|TATA_HAEIN Sec-independent protein translocase protein tatA/E homolog
Length = 89
Score = 51.2 bits (121), Expect = 2e-06
Identities = 23/56 (41%), Positives = 37/56 (66%)
Query: 11 VIVLLVIVLLFGAKKIPELAKGLGSGIKNFKKAVKDDEEEAKNEPKTLDAQATQTK 66
+I+L+VI+L+FG KK+ LG+ +K FKKA+K+DE+ E K++D + K
Sbjct: 10 IILLVVILLIFGTKKLRNAGSDLGAAVKGFKKAMKEDEKVKDAEFKSIDNETASAK 65
>pir||B64145 hypothetical protein HI0187 - Haemophilus influenzae (strain Rd
KW20)
Length = 109
Score = 51.2 bits (121), Expect = 2e-06
Identities = 23/56 (41%), Positives = 37/56 (66%)
Query: 11 VIVLLVIVLLFGAKKIPELAKGLGSGIKNFKKAVKDDEEEAKNEPKTLDAQATQTK 66
+I+L+VI+L+FG KK+ LG+ +K FKKA+K+DE+ E K++D + K
Sbjct: 30 IILLVVILLIFGTKKLRNAGSDLGAAVKGFKKAMKEDEKVKDAEFKSIDNETASAK 85
>gb|AAA92108.1| (U48404) ORF4 [Azotobacter chroococcum]
Length = 192
Score = 50.8 bits (120), Expect = 3e-06
Identities = 21/49 (42%), Positives = 34/49 (68%)
Query: 3 GFTSIWHWVIVLLVIVLLFGAKKIPELAKGLGSGIKNFKKAVKDDEEEA 51
G SIW +I+LL++V+LFG K++ L LG IK F+K++ ++E +A
Sbjct: 4 GGISIWQLLIILLIVVMLFGTKRLKSLGSDLGDAIKGFRKSMDNEENKA 52
>ref|NP_273645.1| (NC_003112) conserved hypothetical protein [Neisseria
meningitidis MC58]
ref|NP_283601.1| (NC_003116) putative sec-independent protein translocase
component [Neisseria meningitidis Z2491]
sp|P57049|TATA_NEIMA Sec-independent protein translocase protein tatA/E homolog
pir||E81925 probable sec-independent protein translocase component NMA0805
[imported] - Neisseria meningitidis (group A strain
Z2491)
emb|CAB84088.1| (AL162754) putative sec-independent protein translocase component
[Neisseria meningitidis Z2491]
Length = 67
Score = 50.8 bits (120), Expect = 3e-06
Identities = 23/56 (41%), Positives = 39/56 (69%), Gaps = 3/56 (5%)
Query: 1 MGGFTSIWHWVIVLLVIVLLFGAKKIPELAKGLGSGIKNFKKAVKD--DEEEAKNE 54
MG F S+ HW+IVL+++VL+FG KK+ + K LG + +FK+ + + D +EA+ +
Sbjct: 1 MGSF-SLTHWIIVLIIVVLIFGTKKLRNVGKDLGGAVHDFKQGLNEGTDGKEAQKD 55
>ref|NP_070880.1| (NC_000917) conserved hypothetical protein [Archaeoglobus
fulgidus]
pir||G69506 conserved hypothetical protein AF2056 - Archaeoglobus fulgidus
gb|AAB89210.1| (AE000961) conserved hypothetical protein [Archaeoglobus
fulgidus]
Length = 113
Score = 50.4 bits (119), Expect = 4e-06
Identities = 22/49 (44%), Positives = 34/49 (68%)
Query: 10 WVIVLLVIVLLFGAKKIPELAKGLGSGIKNFKKAVKDDEEEAKNEPKTL 58
W+++LL+I +LFGA K+PE+A+ LG + FKKA K+ E E + + L
Sbjct: 16 WLLILLIIFVLFGASKLPEVARSLGRSMGEFKKAQKEAEMELRQFEREL 64
>sp|P95557|TATA_PSEST Sec-independent protein translocase protein tatA/E homolog
emb|CAA98158.1| (Z73914) ORF57 protein [Pseudomonas stutzeri]
Length = 57
Score = 49.3 bits (116), Expect = 9e-06
Identities = 21/49 (42%), Positives = 32/49 (64%)
Query: 6 SIWHWVIVLLVIVLLFGAKKIPELAKGLGSGIKNFKKAVKDDEEEAKNE 54
S+W +I+LL++V+LFG K++ L LGS I F+K+V D E + E
Sbjct: 4 SVWQLLIILLIVVMLFGTKRLRGLGSDLGSAINGFRKSVSDGETTTQAE 52
>ref|NP_440350.1| (NC_000911) hypothetical protein [Synechocystis sp. PCC 6803]
pir||S74990 hypothetical protein slr1046 - Synechocystis sp. (strain PCC 6803)
dbj|BAA17030.1| (D90902) ORF_ID:slr1046~hypothetical protein [Synechocystis sp. PCC
6803]
Length = 126
Score = 48.1 bits (113), Expect = 2e-05
Identities = 23/71 (32%), Positives = 42/71 (58%), Gaps = 6/71 (8%)
Query: 12 IVLLVIVLLFGAKKIPELAKGLGSGIKNFKKAVKDDEEEAKNEPKTLD------AQATQT 65
++ ++ +L+FG KK+PE+ + LG ++ F++A K+ E E K E + L+ A+ ++
Sbjct: 54 LIFVIALLVFGPKKLPEVGRSLGKALRGFQEASKEFETELKREAQNLEKSVQIKAELEES 113
Query: 66 KVHESSEIKSK 76
K ESS K
Sbjct: 114 KTPESSSSSEK 124
>ref|NP_484888.1| (NC_003272) hypothetical protein [Nostoc sp. PCC 7120]
dbj|BAB72802.1| (AP003583) ORF_ID:asl0845~hypothetical protein [Nostoc sp. PCC
7120]
Length = 90
Score = 47.8 bits (112), Expect = 3e-05
Identities = 23/71 (32%), Positives = 43/71 (60%), Gaps = 3/71 (4%)
Query: 12 IVLLVIVLLFGAKKIPELAKGLGSGIKNFKKAVKDDEEEAKNEPKTLDAQATQTKVHESS 71
++++V +L+FG KK+PE+ + +G I+ F++A + + E K E + L+ T E
Sbjct: 13 LIMVVALLIFGPKKLPEIGRSMGKAIRGFQEASNEFQSEFKREAEQLEQAVKTTAELEPK 72
Query: 72 EI---KSKQES 79
+I KS+Q+S
Sbjct: 73 QIESVKSEQDS 83
>pir||S30727 hypothetical protein o261 - Escherichia coli
Length = 261
Score = 47.8 bits (112), Expect = 3e-05
Identities = 23/71 (32%), Positives = 43/71 (60%), Gaps = 2/71 (2%)
Query: 10 WVIVLLVIVLLFGAKKIPELAKGLGSGIKNFKKAVKDDE--EEAKNEPKTLDAQATQTKV 67
+ I+ +++VLLFG KK+ + LG+ IK FKKA+ DDE ++ ++ A+ K
Sbjct: 8 YCIIAVIVVLLFGTKKLGSIGSDLGASIKGFKKAMSDDEPKQDKTSQDADFTAKTIADKQ 67
Query: 68 HESSEIKSKQE 78
++++ ++K E
Sbjct: 68 ADTNQEQAKTE 78
>gb|AAD33943.1|AF144708_1 (AF144708) Tha4 protein [Pisum sativum]
Length = 137
Score = 47.8 bits (112), Expect = 3e-05
Identities = 23/64 (35%), Positives = 38/64 (58%), Gaps = 1/64 (1%)
Query: 11 VIVLLVIVLLFGAKKIPELAKGLGSGIKNFKKAVKDDEEEAKNEPKTLDAQATQTKVHES 70
V++ V L+FG KK+PE+ + +G +K+F++A K+ E E K EP + + + E
Sbjct: 67 VVIAGVAALVFGPKKLPEVGRSIGQTVKSFQQAAKEFETELKKEPNPTE-EISVASEQEK 125
Query: 71 SEIK 74
EIK
Sbjct: 126 QEIK 129
>gb|AAA67633.1| (M87049) o261 [Escherichia coli]
Length = 261
Score = 47.8 bits (112), Expect = 3e-05
Identities = 23/71 (32%), Positives = 43/71 (60%), Gaps = 2/71 (2%)
Query: 10 WVIVLLVIVLLFGAKKIPELAKGLGSGIKNFKKAVKDDE--EEAKNEPKTLDAQATQTKV 67
+ I+ +++VLLFG KK+ + LG+ IK FKKA+ DDE ++ ++ A+ K
Sbjct: 8 YCIIAVIVVLLFGTKKLGSIGSDLGASIKGFKKAMSDDEPKQDKTSQDADFTAKTIADKQ 67
Query: 68 HESSEIKSKQE 78
++++ ++K E
Sbjct: 68 ADTNQEQAKTE 78
>ref|NP_286353.1| (NC_002655) orf, hypothetical protein [Escherichia coli O157:H7
EDL933]
ref|NP_308692.1| (NC_002695) Sec-independent protein translocase [Escherichia coli
O157:H7]
ref|NP_415160.1| (NC_000913) orf, hypothetical protein [Escherichia coli K12]
sp|P25895|TATE_ECOLI Sec-independent protein translocase protein tatE
pir||JN0256 ybeC protein - Escherichia coli
gb|AAB40827.1| (U82598) HI0187 homolog [Escherichia coli]
gb|AAC73728.1| (AE000167) orf, hypothetical protein [Escherichia coli K12]
dbj|BAA35270.1| (D90703) Hypothetical protein (lip 3' region) [Escherichia coli]
gb|AAG54961.1|AE005242_5 (AE005242) orf, hypothetical protein [Escherichia coli O157:H7
EDL933]
dbj|BAB34088.1| (AP002552) Sec-independent protein translocase [Escherichia coli
O157:H7]
Length = 67
Score = 47.4 bits (111), Expect = 4e-05
Identities = 24/50 (48%), Positives = 32/50 (64%)
Query: 3 GFTSIWHWVIVLLVIVLLFGAKKIPELAKGLGSGIKNFKKAVKDDEEEAK 52
G SI ++V ++VLLFG KK+ L LG+ IK FKKA+ DD+ AK
Sbjct: 2 GEISITKLLVVAALVVLLFGTKKLRTLGGDLGAAIKGFKKAMNDDDAAAK 51
>ref|NP_394680.1| (NC_002578) Sec-independent protein secretion pathway component
[Thermoplasma acidophilum]
Length = 100
Score = 47.4 bits (111), Expect = 4e-05
Identities = 24/55 (43%), Positives = 35/55 (63%), Gaps = 1/55 (1%)
Query: 10 WVIVLLVIVLLFG-AKKIPELAKGLGSGIKNFKKAVKDDEEEAKNEPKTLDAQAT 63
W+IV++ I++LFG AKK+PELAK +G FK+ + EEE + + AQ T
Sbjct: 8 WLIVIVAILVLFGSAKKVPELAKNIGRATGEFKRGQMEVEEEIRKAMYSKPAQTT 62
>ref|NP_360797.1| (NC_003103) unknown [Rickettsia conorii]
gb|AAL03698.1| (AE008664) unknown [Rickettsia conorii]
Length = 53
Score = 46.6 bits (109), Expect = 6e-05
Identities = 21/42 (50%), Positives = 30/42 (71%)
Query: 6 SIWHWVIVLLVIVLLFGAKKIPELAKGLGSGIKNFKKAVKDD 47
S+ H +IVLL+I +LFGA K+P++ L G+K FK +KDD
Sbjct: 4 SLSHLLIVLLIIFVLFGAGKLPQVMSDLAKGLKAFKDGMKDD 45
>ref|NP_221101.1| (NC_000963) unknown [Rickettsia prowazekii]
sp|Q9ZCJ1|TATA_RICPR Sec-independent protein translocase protein tatA/E homolog
pir||A71635 hypothetical protein RP749 - Rickettsia prowazekii
emb|CAA15177.1| (AJ235273) unknown [Rickettsia prowazekii]
Length = 54
Score = 46.6 bits (109), Expect = 6e-05
Identities = 21/42 (50%), Positives = 30/42 (71%)
Query: 6 SIWHWVIVLLVIVLLFGAKKIPELAKGLGSGIKNFKKAVKDD 47
S H +IVLL+I +LFGA K+P++ L G+K FK+ +KDD
Sbjct: 4 SFSHLLIVLLIIFVLFGAGKLPQVMSDLAKGLKAFKEGMKDD 45
>ref|NP_656107.1| (NC_003995) MttA_Hcf106, mttA/Hcf106 family [Bacillus anthracis
A2012] [Bacillus anthracis str. A2012]
Length = 61
Score = 46.6 bits (109), Expect = 6e-05
Identities = 18/44 (40%), Positives = 32/44 (71%)
Query: 11 VIVLLVIVLLFGAKKIPELAKGLGSGIKNFKKAVKDDEEEAKNE 54
+++L+ +++LFG KK+PE+ K LG +K FKK+ K+ ++A E
Sbjct: 11 ILILVAVLILFGPKKLPEIGKALGETLKEFKKSTKELTDDAFZE 54
>gb|AAA24073.1| (M82805) ORF; putative [Escherichia coli]
Length = 67
Score = 46.2 bits (108), Expect = 8e-05
Identities = 24/50 (48%), Positives = 32/50 (64%)
Query: 3 GFTSIWHWVIVLLVIVLLFGAKKIPELAKGLGSGIKNFKKAVKDDEEEAK 52
G SI ++V ++VLLFG KK+ L LG+ IK FKKA+ DD+ AK
Sbjct: 2 GEISITKLLVVAALVVLLFGTKKLRTLGGDLGAAIKGFKKAMIDDDAAAK 51
>ref|NP_559370.1| (NC_003364) conserved hypothetical protein [Pyrobaculum
aerophilum]
gb|AAL63552.1| (AE009826) conserved hypothetical protein [Pyrobaculum
aerophilum]
Length = 98
Score = 45.8 bits (107), Expect = 1e-04
Identities = 18/46 (39%), Positives = 31/46 (67%)
Query: 11 VIVLLVIVLLFGAKKIPELAKGLGSGIKNFKKAVKDDEEEAKNEPK 56
+++ LVI+L++G K+P LA+G+G I+ F++A EE + E K
Sbjct: 13 ILIALVIILIWGPSKLPALARGMGEAIREFRRAASGVEEHKREEKK 58
>ref|NP_241418.1| (NC_002570) BH0552~unknown conserved protein [Bacillus
halodurans]
dbj|BAA75387.1| (AB013375) YdiI [Bacillus halodurans]
dbj|BAB04271.1| (AP001508) BH0552~unknown conserved protein [Bacillus halodurans]
Length = 65
Score = 45.1 bits (105), Expect = 2e-04
Identities = 22/49 (44%), Positives = 32/49 (64%), Gaps = 5/49 (10%)
Query: 11 VIVLLVIVLLFGAKKIPELAKGLGSGIKNFKKAVK-----DDEEEAKNE 54
+I+ LV +L+FG KK+PEL K G+ ++ FK A K DD+ + KNE
Sbjct: 11 LIIALVALLIFGPKKLPELGKAAGNTLREFKNATKGLADEDDDVKKKNE 59
>ref|NP_294015.1| (NC_001263) conserved hypothetical protein [Deinococcus
radiodurans]
pir||E75537 conserved hypothetical protein - Deinococcus radiodurans (strain
R1)
gb|AAF09873.1|AE001890_5 (AE001890) conserved hypothetical protein [Deinococcus
radiodurans]
Length = 117
Score = 45.1 bits (105), Expect = 2e-04
Identities = 18/40 (45%), Positives = 32/40 (80%)
Query: 11 VIVLLVIVLLFGAKKIPELAKGLGSGIKNFKKAVKDDEEE 50
+I+LLV +L+FG +K+PEL K LG+G++ F+++ + +EE
Sbjct: 10 LIILLVALLVFGPRKLPELGKSLGAGLREFRRSTQGLKEE 49
>ref|NP_634608.1| (NC_003901) Sec-independent protein translocase, protein
[Methanosarcina mazei Goe1]
gb|AAM32280.1| (AE013502) Sec-independent protein translocase, protein
[Methanosarcina mazei Goe1]
Length = 122
Score = 45.1 bits (105), Expect = 2e-04
Identities = 27/70 (38%), Positives = 38/70 (53%), Gaps = 4/70 (5%)
Query: 11 VIVLLVIVLLFGAKKIPELAKGLGSGIKNFKKAVKDDEEEAKN-EPKTLDAQATQTKVHE 69
+ +++ + LFG +KIPELA+ LG I FKKA + E E +P T A K E
Sbjct: 8 IAIIIAALFLFGPQKIPELARALGGAIGEFKKAQRAAELELNEFDPYTRKA---ANKARE 64
Query: 70 SSEIKSKQES 79
E K K+E+
Sbjct: 65 KEENKEKKEA 74
>ref|NP_342013.1| (NC_002754) Conserved hypothetical protein [Sulfolobus
solfataricus]
gb|AAK40803.1| (AE006680) Conserved hypothetical protein [Sulfolobus
solfataricus]
Length = 112
Score = 45.1 bits (105), Expect = 2e-04
Identities = 26/61 (42%), Positives = 37/61 (60%), Gaps = 5/61 (8%)
Query: 5 TSIWHWVIVLLVI-VLLFGAKKIPELAKGLGSGIKNFKKAVKDDEEEAKNEPKTLDAQAT 63
T+ + W+I+L+VI VL FGA KIPEL + +G + FKK EA+ E + + AQ
Sbjct: 21 TNPYDWIIILVVIAVLFFGASKIPELFRSMGRAVGEFKKG----RVEAEMELQQMQAQNL 76
Query: 64 Q 64
Q
Sbjct: 77 Q 77
>ref|NP_370871.1| (NC_002758) conserved hypothetical protein [Staphylococcus aureus
subsp. aureus Mu50]
ref|NP_373581.1| (NC_002745) conserved hypothetical protein [Staphylococcus aureus
subsp. aureus N315]
ref|NP_645140.1| (NC_003923) conserved hypothetical protein [Staphylococcus aureus
subsp. aureus MW2]
dbj|BAB41559.1| (AP003130) conserved hypothetical protein [Staphylococcus aureus
subsp. aureus N315]
dbj|BAB56509.1| (AP003359) conserved hypothetical protein [Staphylococcus aureus
subsp. aureus Mu50]
dbj|BAB94188.1| (AP004823) conserved hypothetical protein [Staphylococcus aureus
subsp. aureus MW2]
Length = 71
Score = 44.7 bits (104), Expect = 2e-04
Identities = 17/53 (32%), Positives = 34/53 (64%)
Query: 3 GFTSIWHWVIVLLVIVLLFGAKKIPELAKGLGSGIKNFKKAVKDDEEEAKNEP 55
G T V++ ++ +++FG KK+P+ + +GS +K FK A +D ++E+ + P
Sbjct: 9 GITGPTSLVVISIIALIIFGPKKLPQFGRAIGSTLKEFKSATEDLDKESHDTP 61
>ref|NP_279784.1| (NC_002607) Vng0801c [Halobacterium sp. NRC-1]
gb|AAG19264.1| (AE005022) Vng0801c [Halobacterium sp. NRC-1]
Length = 96
Score = 44.7 bits (104), Expect = 2e-04
Identities = 21/50 (42%), Positives = 31/50 (62%)
Query: 1 MGGFTSIWHWVIVLLVIVLLFGAKKIPELAKGLGSGIKNFKKAVKDDEEE 50
+GG +VLL+ +LLFGA KIP+LA+ G I F+K ++ E+E
Sbjct: 9 IGGLPGGMEMAVVLLIAILLFGANKIPKLARSSGEAIGEFQKGREEVEQE 58
>ref|NP_625908.1| (NC_003888) putative secreted protein [Streptomyces coelicolor
A3(2)]
emb|CAB59486.1| (AL132648) putative secreted protein [Streptomyces coelicolor
A3(2)]
emb|CAC16939.1| (AJ251128) twin arginin translocation complex component
[Streptomyces lividans]
Length = 95
Score = 44.7 bits (104), Expect = 2e-04
Identities = 19/42 (45%), Positives = 30/42 (71%)
Query: 11 VIVLLVIVLLFGAKKIPELAKGLGSGIKNFKKAVKDDEEEAK 52
+++L+VI+LLFGAKK+P++A+ LG + K K + EAK
Sbjct: 11 ILILVVIILLFGAKKLPDMARSLGKSARILKSEAKAMKSEAK 52
>ref|NP_455208.1| (NC_003198) sec-independent protein translocase protein TatE
[Salmonella enterica subsp. enterica serovar Typhi]
ref|NP_459624.1| (NC_003197) putative Sec-independent protein secretion pathway
component [Salmonella typhimurium LT2]
sp|P57050|TATE_SALTY Sec-independent protein translocase protein tatE
gb|AAL19583.1| (AE008725) putative Sec-independent protein secretion pathway
component [Salmonella typhimurium LT2]
emb|CAD05109.1| (AL627267) sec-independent protein translocase protein TatE
[Salmonella enterica subsp. enterica serovar Typhi]
Length = 67
Score = 44.7 bits (104), Expect = 2e-04
Identities = 22/52 (42%), Positives = 32/52 (61%)
Query: 3 GFTSIWHWVIVLLVIVLLFGAKKIPELAKGLGSGIKNFKKAVKDDEEEAKNE 54
G SI ++V ++VLLFG KK+ L LG+ IK FKKA+ D++ K +
Sbjct: 2 GEISITKLLVVAALVVLLFGTKKLRTLGGDLGTAIKGFKKAMNDEDAGVKKD 53
>gb|AAD31523.1|AF145756_1 (AF145756) THA9 [Zea mays]
Length = 169
Score = 44.3 bits (103), Expect = 3e-04
Identities = 18/44 (40%), Positives = 30/44 (67%)
Query: 12 IVLLVIVLLFGAKKIPELAKGLGSGIKNFKKAVKDDEEEAKNEP 55
++ V L+FG K++PE+ + LG +K+F++A K+ E E K EP
Sbjct: 85 VIAGVAALVFGPKQLPEIGRSLGKTVKSFQEAAKEFESELKKEP 128
>ref|NP_600707.1| (NC_003450) COG1826:Sec-independent protein secretion pathway
components [Corynebacterium glutamicum]
dbj|BAB98884.1| (AP005278) Hypothetical protein [Corynebacterium glutamicum ATCC
13032]
Length = 105
Score = 44.3 bits (103), Expect = 3e-04
Identities = 20/54 (37%), Positives = 35/54 (64%), Gaps = 5/54 (9%)
Query: 8 WHWVIVLLVIVLLFGAKKIPELAKGLGSGIKNFKKAVKD-----DEEEAKNEPK 56
W I++L+I++LFGAKK+P+ A+ +G ++ FK VK+ D E + +P+
Sbjct: 6 WEIGIIVLLIIVLFGAKKLPDAARSIGRSMRIFKSEVKEMNKDGDTPEQQQQPQ 59
>ref|NP_388479.1| (NC_000964) ydiI [Bacillus subtilis]
pir||B69787 hypothetical protein ydiI - Bacillus subtilis
dbj|BAA19722.1| (D88802) membrane protein [Bacillus subtilis]
emb|CAB12417.1| (Z99107) ydiI [Bacillus subtilis]
Length = 57
Score = 43.9 bits (102), Expect = 4e-04
Identities = 20/46 (43%), Positives = 29/46 (62%), Gaps = 3/46 (6%)
Query: 12 IVLLVIVLLFGAKKIPELAKGLGSGIKNFKKAVK---DDEEEAKNE 54
++ +V +++FG KK+PEL K G ++ FK A K DEEE K E
Sbjct: 10 VIAIVALIIFGPKKLPELGKAAGDTLREFKNATKGLTSDEEEKKKE 55
>ref|NP_110890.1| (NC_002689) Predicted Sec-independent protein secretion pathway
component [Thermoplasma volcanium]
Length = 100
Score = 43.5 bits (101), Expect = 5e-04
Identities = 20/44 (45%), Positives = 32/44 (72%), Gaps = 1/44 (2%)
Query: 10 WVIVLLVIVLLFG-AKKIPELAKGLGSGIKNFKKAVKDDEEEAK 52
W+IV++VI++LFG AKK+PELA+ +G FK+ + E+E +
Sbjct: 8 WLIVIVVILVLFGSAKKVPELARNVGRATGEFKRGQMEIEQELR 51
>dbj|BAB59517.1| (AP000992) hypothetical protein [Thermoplasma volcanium]
Length = 104
Score = 43.5 bits (101), Expect = 5e-04
Identities = 20/44 (45%), Positives = 32/44 (72%), Gaps = 1/44 (2%)
Query: 10 WVIVLLVIVLLFG-AKKIPELAKGLGSGIKNFKKAVKDDEEEAK 52
W+IV++VI++LFG AKK+PELA+ +G FK+ + E+E +
Sbjct: 12 WLIVIVVILVLFGSAKKVPELARNVGRATGEFKRGQMEIEQELR 55
>ref|NP_407225.1| (NC_003143) Sec-independent protein translocase protein TatA
[Yersinia pestis]
emb|CAC93245.1| (AJ414158) Sec-independent protein translocase protein TatA
[Yersinia pestis]
Length = 88
Score = 43.5 bits (101), Expect = 5e-04
Identities = 25/71 (35%), Positives = 39/71 (54%), Gaps = 2/71 (2%)
Query: 11 VIVLLVIVLLFGAKKIPELAKGLGSGIKNFKKAVKDDEE-EAKNEPKTL-DAQATQTKVH 68
+I+ +++VLLFG K+ L LG+ IK FKKA+ DD + N KT DA ++
Sbjct: 10 LIIAVIVVLLFGTNKLRTLGSDLGASIKGFKKAMGDDSQTPPTNVDKTSNDADFAKSITE 69
Query: 69 ESSEIKSKQES 79
+ + +ES
Sbjct: 70 KQQPVAKAEES 80
>gb|AAD31522.1|AF145755_1 (AF145755) THA4 [Zea mays]
Length = 170
Score = 43.1 bits (100), Expect = 7e-04
Identities = 17/44 (38%), Positives = 30/44 (67%)
Query: 12 IVLLVIVLLFGAKKIPELAKGLGSGIKNFKKAVKDDEEEAKNEP 55
++ V L+FG K++PE+ + +G +K+F++A K+ E E K EP
Sbjct: 95 VIAGVAALVFGPKQLPEIGRSIGKTVKSFQQAAKEFETELKKEP 138
>ref|NP_376485.1| (NC_003106) 94aa long conserved hypothetical protein [Sulfolobus
tokodaii]
dbj|BAB65594.1| (AP000983) 94aa long conserved hypothetical protein [Sulfolobus
tokodaii]
Length = 94
Score = 43.1 bits (100), Expect = 7e-04
Identities = 22/68 (32%), Positives = 36/68 (52%)
Query: 11 VIVLLVIVLLFGAKKIPELAKGLGSGIKNFKKAVKDDEEEAKNEPKTLDAQATQTKVHES 70
+I+++ I+L+FGA K+PE+ + LG FKK + E E + Q TQ +
Sbjct: 14 IIIVVAIILIFGASKLPEIFRSLGRATGEFKKGKLEAEMELAQLQQVQQQQQTQQQKDLQ 73
Query: 71 SEIKSKQE 78
S+I Q+
Sbjct: 74 SKIDELQK 81
>ref|NP_406123.1| (NC_003143) sec-independent protein translocase protein [Yersinia
pestis]
emb|CAC92840.1| (AJ414153) sec-independent protein translocase protein [Yersinia
pestis]
Length = 85
Score = 42.7 bits (99), Expect = 9e-04
Identities = 20/44 (45%), Positives = 31/44 (70%)
Query: 6 SIWHWVIVLLVIVLLFGAKKIPELAKGLGSGIKNFKKAVKDDEE 49
SI ++V ++IVLLFG K+ L LG+ +K FKKA+++D+E
Sbjct: 5 SITKLLVVGILIVLLFGTSKLRTLGADLGAALKGFKKAMRNDDE 48
>ref|NP_148411.1| (NC_000854) Sec-independent protein secretion pathway component
[Aeropyrum pernix]
Length = 71
Score = 42.4 bits (98), Expect = 0.001
Identities = 15/44 (34%), Positives = 30/44 (68%)
Query: 11 VIVLLVIVLLFGAKKIPELAKGLGSGIKNFKKAVKDDEEEAKNE 54
V++LL+++++FG KIPE+A+ LG +K + ++ + E A +
Sbjct: 14 VLILLILLIIFGPSKIPEIARNLGLAVKELRNSISGEGEAASTQ 57
>ref|NP_614484.1| (NC_003551) Sec-independent protein secretion pathway component
[Methanopyrus kandleri AV19]
gb|AAM02414.1| (AE010411) Sec-independent protein secretion pathway component
[Methanopyrus kandleri AV19]
Length = 66
Score = 42.0 bits (97), Expect = 0.001
Identities = 18/46 (39%), Positives = 32/46 (69%)
Query: 11 VIVLLVIVLLFGAKKIPELAKGLGSGIKNFKKAVKDDEEEAKNEPK 56
+++L VI+LLFG KK+PELA+ +G + +++A + E E + E +
Sbjct: 11 LLILAVILLLFGPKKLPELARAIGEAVGEYRRAQRRVEWELEAEER 56
>ref|NP_487918.1| (NC_003272) hypothetical protein [Nostoc sp. PCC 7120]
dbj|BAB75577.1| (AP003594) ORF_ID:asr3878~hypothetical protein [Nostoc sp. PCC
7120]
Length = 93
Score = 41.2 bits (95), Expect = 0.003
Identities = 18/43 (41%), Positives = 27/43 (61%)
Query: 12 IVLLVIVLLFGAKKIPELAKGLGSGIKNFKKAVKDDEEEAKNE 54
I+++V V++FG KKIPEL LG ++ FK +K E+ E
Sbjct: 48 IIVVVAVVIFGPKKIPELGSALGKTLRGFKDELKTPSEDTNPE 90
>ref|NP_148420.1| (NC_000854) Sec-independent protein secretion pathway component
[Aeropyrum pernix]
Length = 59
Score = 40.8 bits (94), Expect = 0.003
Identities = 13/44 (29%), Positives = 32/44 (72%)
Query: 11 VIVLLVIVLLFGAKKIPELAKGLGSGIKNFKKAVKDDEEEAKNE 54
+I+ ++ +++FG +++ E+A+ LG+ +K F++A+ + EE K +
Sbjct: 13 IIIFVIALIVFGPERLTEIARNLGTAVKEFRRAMSEASEERKRK 56
>ref|NP_602245.1| (NC_003450) COG1826:Sec-independent protein secretion pathway
components [Corynebacterium glutamicum]
dbj|BAC00446.1| (AP005283) Hypothetical protein [Corynebacterium glutamicum ATCC
13032]
Length = 60
Score = 40.4 bits (93), Expect = 0.004
Identities = 16/49 (32%), Positives = 37/49 (74%), Gaps = 1/49 (2%)
Query: 11 VIVLLVIVLLFGAKKIPELAKGLGSGIKNFKKAVKD-DEEEAKNEPKTL 58
+IV LV+++LFG+ K+P++A+ +G ++ FK +K+ ++++ ++ +TL
Sbjct: 10 LIVALVVIVLFGSNKLPDVARSVGRSMRIFKSEIKEMNKDQIESSDQTL 58
>ref|NP_420810.1| (NC_002696) conserved hypothetical protein [Caulobacter
crescentus CB15]
gb|AAK23978.1| (AE005874) conserved hypothetical protein [Caulobacter crescentus
CB15]
Length = 74
Score = 40.4 bits (93), Expect = 0.004
Identities = 24/58 (41%), Positives = 33/58 (56%), Gaps = 3/58 (5%)
Query: 3 GFTSIWHWVIVLLVIVLLFGAK-KIPELAKGLGSGIKNFKKAVKDD--EEEAKNEPKT 57
G S HWVIVL ++ LLFG + K+ + GIK FK +KD+ E A N+ K+
Sbjct: 2 GSMSWIHWVIVLGIVALLFGGRGKLSSIMGDAAKGIKAFKDGLKDESSSEVADNKAKS 59
>ref|NP_378613.1| (NC_003106) 93aa long conserved hypothetical protein [Sulfolobus
tokodaii]
dbj|BAB67722.1| (AP000990) 93aa long conserved hypothetical protein [Sulfolobus
tokodaii]
Length = 93
Score = 39.7 bits (91), Expect = 0.007
Identities = 21/67 (31%), Positives = 35/67 (51%)
Query: 11 VIVLLVIVLLFGAKKIPELAKGLGSGIKNFKKAVKDDEEEAKNEPKTLDAQATQTKVHES 70
+++++VI+L FGA K+PE+ + LG FKK + E E + L Q ++ +
Sbjct: 13 ILLIVVILLFFGASKLPEVFRSLGRATGEFKKGQLEAELELAQMQQQLSQQNKSDELAKK 72
Query: 71 SEIKSKQ 77
E KQ
Sbjct: 73 IEELQKQ 79
>emb|CAC34414.1| (AJ276399) putative TatA protein [Legionella pneumophila]
Length = 61
Score = 39.3 bits (90), Expect = 0.010
Identities = 15/38 (39%), Positives = 25/38 (65%)
Query: 11 VIVLLVIVLLFGAKKIPELAKGLGSGIKNFKKAVKDDE 48
+++L +I+ LFG K+ + LG IKNF+KA+ +E
Sbjct: 12 LLILAIIIALFGTSKLKTIGSDLGEAIKNFRKAMNSEE 49
>ref|NP_469726.1| (NC_003212) similar to conserved hypothetical protein [Listeria
innocua]
emb|CAC95614.1| (AL596164) similar to conserved hypothetical protein [Listeria
innocua]
Length = 59
Score = 39.3 bits (90), Expect = 0.010
Identities = 16/50 (32%), Positives = 31/50 (62%)
Query: 12 IVLLVIVLLFGAKKIPELAKGLGSGIKNFKKAVKDDEEEAKNEPKTLDAQ 61
+++ +++FG KK+PEL + G ++ FK A K +++K E K D++
Sbjct: 9 LIVGAALVIFGPKKLPELGRAAGDTLREFKNATKGMMDDSKEETKKEDSR 58
Database: /home/scwang/download_20020708_db/nr
Posted date: Aug 7, 2002 12:55 PM
Number of letters in database: 324,149,939
Number of sequences in database: 1,026,957
Lambda K H
0.311 0.130 0.363
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 47,218,707
Number of Sequences: 1026957
Number of extensions: 1556547
Number of successful extensions: 6818
Number of sequences better than 1.0e-02: 77
Number of HSP's better than 0.0 without gapping: 71
Number of HSP's successfully gapped in prelim test: 6
Number of HSP's that attempted gapping in prelim test: 6740
Number of HSP's gapped (non-prelim): 77
length of query: 79
length of database: 324,149,939
effective HSP length: 55
effective length of query: 24
effective length of database: 267,667,304
effective search space: 6424015296
effective search space used: 6424015296
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 90 (39.3 bits)