BLASTP 2.2.1 [Apr-13-2001]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|15644995|ref|NP_207165.1| hypothetical protein
[Helicobacter pylori 26695]
(202 letters)
Database: /home/scwang/download_20020708_db/nr
1,026,957 sequences; 324,149,939 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_207165.1| (NC_000915) hypothetical protein [Helicoba... 404 e-112
ref|NP_223731.1| (NC_000921) putative [Helicobacter pylori ... 351 3e-96
gb|AAM45311.1| (AC117080) hypothetical protein [Dictyosteli... 50 1e-05
emb|CAB64663.1| (AJ249992) pedal retractor muscle myosin he... 47 2e-04
gb|AAK54087.2|AF362368_1 (AF362368) histidine kinase DhkF [... 45 5e-04
gb|AAB48030.1| (U69668) Tpr [Homo sapiens] 45 5e-04
pir||S33124 tpr protein - human 45 5e-04
ref|NP_003283.1| (NM_003292) translocated promoter region (... 45 5e-04
ref|NP_000417.1| (NM_000426) laminin alpha 2 subunit precur... 44 8e-04
gb|AAC26807.1| (AF051784) 14S cohesin SMC1 subunit; SMC pro... 44 8e-04
ref|XP_011387.5| (XM_011387) similar to Laminin alpha-2 cha... 44 8e-04
gb|AAB18388.1| (U66796) laminin alpha 2 chain [Homo sapiens] 44 8e-04
sp|Q96YR5|RA50_SULTO DNA double-strand break repair rad50 A... 44 0.001
ref|NP_378103.1| (NC_003106) 882aa long hypothetical purine... 44 0.001
pir||PX0082 laminin, M chain - human (fragment) >gi|7428707... 44 0.001
sp|P39922|MYS3_HYDAT Myosin heavy chain, clone 203 >gi|5312... 43 0.002
pir||S30782 integrin homolog - yeast (Saccharomyces cerevis... 43 0.002
ref|NP_594789.1| (NC_003424) putative transcriptional regul... 43 0.002
gb|AAB00143.1| (L03188) putative [Saccharomyces cerevisiae] 43 0.002
ref|NP_623083.1| (NC_003869) Chromosome segregation ATPases... 43 0.002
ref|NP_010225.1| (NC_001136) involved intracellular protein... 42 0.003
emb|CAB39037.2| (AL034559) hypothetical protein, PFC0960c [... 42 0.003
sp|P25386|USO1_YEAST Intracellular protein transport protei... 42 0.003
emb|CAA98620.1| (Z74105) ORF YDL058w [Saccharomyces cerevis... 42 0.003
ref|NP_473326.1| (NC_000521) predicted using hexExon; MAL3P... 42 0.003
ref|NP_663193.1| (NC_004062) hypothetical protein [Phthorim... 42 0.004
gb|EAA05893.1| (AAAB01008839) agCP14535 [Anopheles gambiae ... 42 0.004
ref|NP_562076.1| (NC_003366) hypothetical protein [Clostrid... 41 0.007
ref|NP_473074.1| (NC_000910) BRAHMA ortholog (DNA helicase ... 41 0.007
ref|NP_060041.1| (NM_017571) hypothetical protein LOC55580 ... 41 0.007
dbj|BAA13448.1| (D87742) Similar to Human C219-reactive pep... 41 0.009
ref|NP_473054.1| (NC_000910) hypothetical protein [Plasmodi... 41 0.009
ref|NP_562632.1| (NC_003366) chromosome partition protein [... 41 0.009
ref|XP_046126.3| (XM_046126) KIAA0268 protein [Homo sapiens] 41 0.009
>ref|NP_207165.1| (NC_000915) hypothetical protein [Helicobacter pylori 26695]
pir||G64565 hypothetical protein HP0367 - Helicobacter pylori (strain 26695)
gb|AAD07436.1| (AE000553) H. pylori predicted coding region HP0367 [Helicobacter
pylori 26695]
Length = 202
Score = 404 bits (1037), Expect = e-112
Identities = 202/202 (100%), Positives = 202/202 (100%)
Query: 1 MSKISNNYNPSLMVRDYHTQRVGSHTKNGEKEENKEIQNLSENDEKIKLAKQAKQDNLAI 60
MSKISNNYNPSLMVRDYHTQRVGSHTKNGEKEENKEIQNLSENDEKIKLAKQAKQDNLAI
Sbjct: 1 MSKISNNYNPSLMVRDYHTQRVGSHTKNGEKEENKEIQNLSENDEKIKLAKQAKQDNLAI 60
Query: 61 GDLESRLKSLKGMDKDAKELVGISKAYAHNNEKDRSDFEHFKSRLDKAIDSFNQKSGNDN 120
GDLESRLKSLKGMDKDAKELVGISKAYAHNNEKDRSDFEHFKSRLDKAIDSFNQKSGNDN
Sbjct: 61 GDLESRLKSLKGMDKDAKELVGISKAYAHNNEKDRSDFEHFKSRLDKAIDSFNQKSGNDN 120
Query: 121 LKLPGNIDIDDTKALEKFSKSLESEKENIQNSLHQWKKQLAETNHLNKEYNTLDKTRLNA 180
LKLPGNIDIDDTKALEKFSKSLESEKENIQNSLHQWKKQLAETNHLNKEYNTLDKTRLNA
Sbjct: 121 LKLPGNIDIDDTKALEKFSKSLESEKENIQNSLHQWKKQLAETNHLNKEYNTLDKTRLNA 180
Query: 181 QKFQDVHDTSKITPSRLQDLLA 202
QKFQDVHDTSKITPSRLQDLLA
Sbjct: 181 QKFQDVHDTSKITPSRLQDLLA 202
>ref|NP_223731.1| (NC_000921) putative [Helicobacter pylori J99]
pir||B71861 hypothetical protein jhp1014 - Helicobacter pylori (strain J99)
gb|AAD06591.1| (AE001529) putative [Helicobacter pylori J99]
Length = 201
Score = 351 bits (900), Expect = 3e-96
Identities = 181/204 (88%), Positives = 190/204 (92%), Gaps = 5/204 (2%)
Query: 1 MSKISNNYNPSLMVRDYHTQRVGSHTKNGEKEENKEIQNLSENDEKIKLAKQAKQDNLAI 60
MSKISN+YNPSL +RDYH+QRV H + KEENKEIQNLSENDEKIKLAKQAKQDNLAI
Sbjct: 1 MSKISNHYNPSLTMRDYHSQRVSPHAR---KEENKEIQNLSENDEKIKLAKQAKQDNLAI 57
Query: 61 GDLESRLKSLKGMDKDAKELVGISKAYAHNNEKDRSDFEHFKSRLDKAIDSFNQK--SGN 118
GDLESRLKSLKGMDKDAKELVGISK+YAHNNEKDRSDFE FKSRLDKAIDSFNQ +G
Sbjct: 58 GDLESRLKSLKGMDKDAKELVGISKSYAHNNEKDRSDFERFKSRLDKAIDSFNQNLDNGA 117
Query: 119 DNLKLPGNIDIDDTKALEKFSKSLESEKENIQNSLHQWKKQLAETNHLNKEYNTLDKTRL 178
+LKLP +IDIDDTKALEKFSKSLESEKE+IQNSLHQWKKQLAETNHLNKEYNTLDKTRL
Sbjct: 118 ASLKLPSDIDIDDTKALEKFSKSLESEKESIQNSLHQWKKQLAETNHLNKEYNTLDKTRL 177
Query: 179 NAQKFQDVHDTSKITPSRLQDLLA 202
NAQKFQDVHDTSKITPSRLQDLLA
Sbjct: 178 NAQKFQDVHDTSKITPSRLQDLLA 201
>gb|AAM45311.1| (AC117080) hypothetical protein [Dictyostelium discoideum]
Length = 793
Score = 50.4 bits (119), Expect = 1e-05
Identities = 43/157 (27%), Positives = 74/157 (46%), Gaps = 11/157 (7%)
Query: 20 QRVGSHTKNGEKEENKEIQNLSENDEKIKLAKQAKQDNLAI-----GDLESRLKSLKGMD 74
+++ K E+E K+I+NL +E+I++ KQ K+DNL + + E+ ++ +
Sbjct: 44 KKISLDLKQKEEEIEKKIENLLIKEEEIEIKKQEKKDNLLLKKQQQQENENNNNNINNNN 103
Query: 75 KDAKELVGISKAYAHNNEKDRSDFEHFKSRLDKAID-SFNQKSGNDNLKLPGNIDIDDTK 133
L+G K NN + S E K +K + S NQK K NI + ++
Sbjct: 104 SYNNILIGFGK----NNLRGDSFLEKEKEISNKQKEISDNQKEKEKLEKRKENIKLMKSE 159
Query: 134 ALEKFSKSLESEKE-NIQNSLHQWKKQLAETNHLNKE 169
LEK +E K N+ N L ++ + + LNK+
Sbjct: 160 YLEKIKTDMEKRKRLNLYNRLKSHQENITKNRLLNKQ 196
>emb|CAB64663.1| (AJ249992) pedal retractor muscle myosin heavy chain [Mytilus
galloprovincialis]
Length = 1708
Score = 46.6 bits (109), Expect = 2e-04
Identities = 48/182 (26%), Positives = 85/182 (46%), Gaps = 11/182 (6%)
Query: 30 EKEENKEIQNLSENDEKIKLAKQAKQDNLAIGDLESRLKSLKG--MDKD--AKELVGISK 85
E++ + +Q SE D + L ++ +Q + ES++K ++ +D++ A EL G+ K
Sbjct: 644 EQKNDMYLQLQSEQDNVVDLEQRVEQLITQKAEFESQMKEMEERLLDEEDAASELEGLKK 703
Query: 86 AYAHNNEKDRSDFEHFKSRLDKAIDSFNQKSGNDNLKLPGNIDIDDTKALEKFSKSLESE 145
N + + D E ++ L KA K N L G + D + + K K ++
Sbjct: 704 KMEGENSEMKRDIEDLETTLAKAEQDKTHKD-NQIKTLQGEMAQQDEQ-ISKLGKEKKNL 761
Query: 146 KENIQNSLHQWKKQLAETNHLN----KEYNTLDKTRLNAQKFQDVH-DTSKITPSRLQDL 200
+E + +L +K+ + NHLN K +TLD+ N ++ + V D K QDL
Sbjct: 762 EEVNKKTLADLQKEEDKVNHLNKIKAKLESTLDEMEDNLEREKKVRGDVEKSKRKVEQDL 821
Query: 201 LA 202
A
Sbjct: 822 KA 823
>gb|AAK54087.2|AF362368_1 (AF362368) histidine kinase DhkF [Dictyostelium discoideum]
Length = 1548
Score = 45.1 bits (105), Expect = 5e-04
Identities = 47/203 (23%), Positives = 81/203 (39%), Gaps = 23/203 (11%)
Query: 3 KISNNYNPSLMVRDYHTQRVGSHTKNGEKEEN-KEIQNLSENDEKIKLAKQAKQD----N 57
+IS N L + Q++ N +K ++ +E +L +N K K+ +D N
Sbjct: 95 EISPKKNNYLKTIECFFQKMNDTPNNEKKSQDLEEFDHLGDNSPLTKRKKKQNKDGKYYN 154
Query: 58 LAIGDLESRLKSLKGMDKDAKELVGISKAYA------------HNNEKDRSDFEHFKSRL 105
L+ D +SRL ++ L A +NN + ++ + +
Sbjct: 155 LSASDFDSRLIKSSSSNESMDSLDSSCSCNACDYNSEYNNNNNNNNNNNNNNNNNNNNNN 214
Query: 106 DKAIDSFNQKSGNDNLK---LPGNIDIDDTKALEKFSKSLESEKENIQNSLHQWKKQLAE 162
+ I++ N S NDN NI+ D + +EKF L + E+ + Q + Q+ +
Sbjct: 215 NNNINNINSNSSNDNNNKNNYNNNINKSDFQKMEKFDNYLGGDDESGEQPNDQHQLQIQK 274
Query: 163 TNHLNKEYNTLDKTRLNAQKFQD 185
N L YN DK L D
Sbjct: 275 QNPL---YNVKDKKSLIGNNLLD 294
>gb|AAB48030.1| (U69668) Tpr [Homo sapiens]
Length = 2363
Score = 45.1 bits (105), Expect = 5e-04
Identities = 48/203 (23%), Positives = 91/203 (44%), Gaps = 38/203 (18%)
Query: 5 SNNYNPSLMVRDYHTQRVGSHTK------------NGEKEENKE-IQNLSENDEKIKLAK 51
+ Y L ++ HT+R+ T+ N N+ IQ+L E+ K++ K
Sbjct: 1351 TEEYRKLLSEKEVHTKRIQQLTEEIGRLKAEIARSNASLTNNQNLIQSLKEDLNKVRTEK 1410
Query: 52 QAKQDNL--AIGDLESRLKSLKGMDKDAKELVGISKAYAHNNEKDRSDFEHFKSRLDKAI 109
+ Q +L I D++ ++K++ + K I + Y ++ +E K++ DK +
Sbjct: 1411 ETIQKDLDAKIIDIQEKVKTITQVKK-------IGRRY-------KTQYEELKAQQDKVM 1456
Query: 110 DSFNQKSGNDNLKLPGNIDIDDTKAL----EKFSKSLESEKENIQNSLHQWKKQLAETNH 165
++ Q SG+ + ++ + K E SKSLES+ EN+Q +L + ET
Sbjct: 1457 ETSAQSSGDHQEQHVSVQEMQELKETLNQAETKSKSLESQVENLQKTLSE-----KETEA 1511
Query: 166 LNKEYNTLDKTRLNAQKFQDVHD 188
N + T+ ++ QD+ D
Sbjct: 1512 RNLQEQTVQLQSELSRLRQDLQD 1534
>pir||S33124 tpr protein - human
Length = 2094
Score = 45.1 bits (105), Expect = 5e-04
Identities = 48/203 (23%), Positives = 91/203 (44%), Gaps = 38/203 (18%)
Query: 5 SNNYNPSLMVRDYHTQRVGSHTK------------NGEKEENKE-IQNLSENDEKIKLAK 51
+ Y L ++ HT+R+ T+ N N+ IQ+L E+ K++ K
Sbjct: 1351 TEEYRKLLSEKEVHTKRIQQLTEEIGRLKAEIARSNASLTNNQNLIQSLKEDLNKVRTEK 1410
Query: 52 QAKQDNL--AIGDLESRLKSLKGMDKDAKELVGISKAYAHNNEKDRSDFEHFKSRLDKAI 109
+ Q +L I D++ ++K++ + K I + Y ++ +E K++ DK +
Sbjct: 1411 ETIQKDLDAKIIDIQEKVKTITQVKK-------IGRRY-------KTQYEELKAQQDKVM 1456
Query: 110 DSFNQKSGNDNLKLPGNIDIDDTKAL----EKFSKSLESEKENIQNSLHQWKKQLAETNH 165
++ Q SG+ + ++ + K E SKSLES+ EN+Q +L + ET
Sbjct: 1457 ETSAQSSGDHQEQHVSVQEMQELKETLNQAETKSKSLESQVENLQKTLSE-----KETEA 1511
Query: 166 LNKEYNTLDKTRLNAQKFQDVHD 188
N + T+ ++ QD+ D
Sbjct: 1512 RNLQEQTVQLQSELSRLRQDLQD 1534
>ref|NP_003283.1| (NM_003292) translocated promoter region (to activated MET oncogene);
Tumor potentiating region (translocated promoter region)
[Homo sapiens]
sp|P12270|TPR_HUMAN Nucleoprotein TPR
emb|CAA47021.1| (X66397) Tpr [Homo sapiens]
Length = 2349
Score = 45.1 bits (105), Expect = 5e-04
Identities = 48/203 (23%), Positives = 91/203 (44%), Gaps = 38/203 (18%)
Query: 5 SNNYNPSLMVRDYHTQRVGSHTK------------NGEKEENKE-IQNLSENDEKIKLAK 51
+ Y L ++ HT+R+ T+ N N+ IQ+L E+ K++ K
Sbjct: 1351 TEEYRKLLSEKEVHTKRIQQLTEEIGRLKAEIARSNASLTNNQNLIQSLKEDLNKVRTEK 1410
Query: 52 QAKQDNL--AIGDLESRLKSLKGMDKDAKELVGISKAYAHNNEKDRSDFEHFKSRLDKAI 109
+ Q +L I D++ ++K++ + K I + Y ++ +E K++ DK +
Sbjct: 1411 ETIQKDLDAKIIDIQEKVKTITQVKK-------IGRRY-------KTQYEELKAQQDKVM 1456
Query: 110 DSFNQKSGNDNLKLPGNIDIDDTKAL----EKFSKSLESEKENIQNSLHQWKKQLAETNH 165
++ Q SG+ + ++ + K E SKSLES+ EN+Q +L + ET
Sbjct: 1457 ETSAQSSGDHQEQHVSVQEMQELKETLNQAETKSKSLESQVENLQKTLSE-----KETEA 1511
Query: 166 LNKEYNTLDKTRLNAQKFQDVHD 188
N + T+ ++ QD+ D
Sbjct: 1512 RNLQEQTVQLQSELSRLRQDLQD 1534
>ref|NP_000417.1| (NM_000426) laminin alpha 2 subunit precursor; Laminin, alpha-2
(merosin) [Homo sapiens]
sp|P24043|LMA2_HUMAN Laminin alpha-2 chain precursor (Laminin M chain) (Merosin heavy
chain)
emb|CAA81394.1| (Z26653) laminin M chain (merosin) [Homo sapiens]
Length = 3110
Score = 44.3 bits (103), Expect = 8e-04
Identities = 42/152 (27%), Positives = 75/152 (48%), Gaps = 10/152 (6%)
Query: 29 GEKEENKEIQNLSENDEKI-KLAKQAKQDNLAIGD--LESRLKSLKGMDKDAKELVGISK 85
G ++E E +NL ++I ++ K+ ++ NL E L + + + K K+L G S+
Sbjct: 1704 GTRDEAFE-RNLEGLQKEIDQMIKELRRKNLETQKEIAEDELVAAEALLKKVKKLFGESR 1762
Query: 86 AYAHNNEKD-RSDFEHFKSRLDKAIDSFNQKSGNDNLKLPGNIDIDDTK---ALEKFSKS 141
EKD R +K+++D A D + + D ++ + + K ALEK ++
Sbjct: 1763 GENEEMEKDLREKLADYKNKVDDAWDLLREAT--DKIREANRLFAVNQKNMTALEKKKEA 1820
Query: 142 LESEKENIQNSLHQWKKQLAETNHLNKEYNTL 173
+ES K I+N+L + L E N L E N++
Sbjct: 1821 VESGKRQIENTLKEGNDILDEANRLADEINSI 1852
>gb|AAC26807.1| (AF051784) 14S cohesin SMC1 subunit; SMC protein [Xenopus laevis]
Length = 1232
Score = 44.3 bits (103), Expect = 8e-04
Identities = 42/177 (23%), Positives = 85/177 (47%), Gaps = 16/177 (9%)
Query: 16 DYHTQR-VGSHTKNG--EKEENKEIQNLSENDEKIKLAKQAKQDNLAIGDLESRLKSL-- 70
+YH ++ + + K EKEE + Q L + + ++ Q + ++E K L
Sbjct: 185 NYHRKKNIAAERKEAKQEKEEAERYQRLKDEVARAQIQLQLFKLYHNESEIEKLNKELSV 244
Query: 71 --KGMDKDAKELVGISKAYAHNNEKDRSDFEHFKSRLDKAIDSFNQKSGNDNLKLPGNID 128
KG++KD K + + + + +K+ + ++K I +K N KLP I
Sbjct: 245 KNKGIEKDKKHMDKVEEELK-DKKKELGKMMREQQAIEKEI---KEKDAELNQKLPQYIK 300
Query: 129 IDDTKALEKFSKSLESEKENIQNSLHQWKKQLAETNHLNKEYNTLDKTRLNAQKFQD 185
+ + + K + K+++QN+ Q+KK+ A+ + L KE +++K R Q+F++
Sbjct: 301 AKENPSHK--IKKFRAAKKSLQNAQKQYKKRKADMDELEKEMLSVEKAR---QEFEE 352
>ref|XP_011387.5| (XM_011387) similar to Laminin alpha-2 chain precursor (Laminin M
chain) (Merosin heavy chain) [Homo sapiens]
Length = 3122
Score = 44.3 bits (103), Expect = 8e-04
Identities = 42/152 (27%), Positives = 75/152 (48%), Gaps = 10/152 (6%)
Query: 29 GEKEENKEIQNLSENDEKI-KLAKQAKQDNLAIGD--LESRLKSLKGMDKDAKELVGISK 85
G ++E E +NL ++I ++ K+ ++ NL E L + + + K K+L G S+
Sbjct: 1704 GTRDEAFE-RNLEGLQKEIDQMIKELRRKNLETQKEIAEDELVAAEALLKKVKKLFGESR 1762
Query: 86 AYAHNNEKD-RSDFEHFKSRLDKAIDSFNQKSGNDNLKLPGNIDIDDTK---ALEKFSKS 141
EKD R +K+++D A D + + D ++ + + K ALEK ++
Sbjct: 1763 GENEEMEKDLREKLADYKNKVDDAWDLLREAT--DKIREANRLFAVNQKNMTALEKKKEA 1820
Query: 142 LESEKENIQNSLHQWKKQLAETNHLNKEYNTL 173
+ES K I+N+L + L E N L E N++
Sbjct: 1821 VESGKRQIENTLKEGNDILDEANRLADEINSI 1852
>gb|AAB18388.1| (U66796) laminin alpha 2 chain [Homo sapiens]
Length = 3110
Score = 44.3 bits (103), Expect = 8e-04
Identities = 42/152 (27%), Positives = 75/152 (48%), Gaps = 10/152 (6%)
Query: 29 GEKEENKEIQNLSENDEKI-KLAKQAKQDNLAIGD--LESRLKSLKGMDKDAKELVGISK 85
G ++E E +NL ++I ++ K+ ++ NL E L + + + K K+L G S+
Sbjct: 1704 GTRDEAFE-RNLEGLQKEIDQMIKELRRKNLETQKEIAEDELVAAEALLKKVKKLFGESR 1762
Query: 86 AYAHNNEKD-RSDFEHFKSRLDKAIDSFNQKSGNDNLKLPGNIDIDDTK---ALEKFSKS 141
EKD R +K+++D A D + + D ++ + + K ALEK ++
Sbjct: 1763 GENEEMEKDLREKLADYKNKVDDAWDLLREAT--DKIREANRLFAVNQKNMTALEKKKEA 1820
Query: 142 LESEKENIQNSLHQWKKQLAETNHLNKEYNTL 173
+ES K I+N+L + L E N L E N++
Sbjct: 1821 VESGKRQIENTLKEGNDILDEANRLADEINSI 1852
>sp|Q96YR5|RA50_SULTO DNA double-strand break repair rad50 ATPase
Length = 879
Score = 43.9 bits (102), Expect = 0.001
Identities = 40/140 (28%), Positives = 68/140 (48%), Gaps = 10/140 (7%)
Query: 35 KEIQNLSENDEKIKLA----KQAKQDNLAIGDLESRLKSLKGMDKDAKELVGISKAYAHN 90
+E + + E KIKLA K K + + DLE +LK + +++D K+ + I
Sbjct: 291 EEKEKIIEAQNKIKLAQEKEKSLKTIKINLTDLEEKLKRKRELEEDYKKYIEIKGELEEL 350
Query: 91 NEKDRSDFEHFKSRLDKAIDSFNQ-KSGNDNLKLPGNIDIDDTKALEKFSKSLES---EK 146
EK+R F RL ++ +S N K+ NI+ D K L+K ++ L + E+
Sbjct: 351 EEKERK-FNSLSDRLKSLKIKLSEIESKISNRKISINIEELD-KELQKLNEDLNNKNQER 408
Query: 147 ENIQNSLHQWKKQLAETNHL 166
E + + L + K ++ E N L
Sbjct: 409 EKLASQLGEIKGRIEELNKL 428
>ref|NP_378103.1| (NC_003106) 882aa long hypothetical purine NTPase [Sulfolobus
tokodaii]
dbj|BAB67212.1| (AP000988) 882aa long hypothetical purine NTPase [Sulfolobus
tokodaii]
Length = 882
Score = 43.9 bits (102), Expect = 0.001
Identities = 40/140 (28%), Positives = 68/140 (48%), Gaps = 10/140 (7%)
Query: 35 KEIQNLSENDEKIKLA----KQAKQDNLAIGDLESRLKSLKGMDKDAKELVGISKAYAHN 90
+E + + E KIKLA K K + + DLE +LK + +++D K+ + I
Sbjct: 294 EEKEKIIEAQNKIKLAQEKEKSLKTIKINLTDLEEKLKRKRELEEDYKKYIEIKGELEEL 353
Query: 91 NEKDRSDFEHFKSRLDKAIDSFNQ-KSGNDNLKLPGNIDIDDTKALEKFSKSLES---EK 146
EK+R F RL ++ +S N K+ NI+ D K L+K ++ L + E+
Sbjct: 354 EEKERK-FNSLSDRLKSLKIKLSEIESKISNRKISINIEELD-KELQKLNEDLNNKNQER 411
Query: 147 ENIQNSLHQWKKQLAETNHL 166
E + + L + K ++ E N L
Sbjct: 412 EKLASQLGEIKGRIEELNKL 431
>pir||PX0082 laminin, M chain - human (fragment)
pir||MMHUMH laminin alpha-2 chain - human (fragment)
gb|AAB33989.1| laminin M chain, merosin=basement membrane protein {G-domain}
[human, placenta, Peptide Partial, 1751 aa]
Length = 1751
Score = 43.9 bits (102), Expect = 0.001
Identities = 39/143 (27%), Positives = 66/143 (45%), Gaps = 13/143 (9%)
Query: 35 KEIQNLSENDEKIKLAKQAKQDNLAIGDLESRLKSLKGMDKDAKELVGISKAYAHNNEKD 94
KEI + + + L Q + D E L + + + K K+L G S+ EKD
Sbjct: 360 KEIDQMIKELRRKNLETQKEID-------EDELVAAEALLKKVKKLFGESRGENEEMEKD 412
Query: 95 -RSDFEHFKSRLDKAIDSFNQKSGNDNLKLPGNIDIDDTK---ALEKFSKSLESEKENIQ 150
R +K+++D A D + + D ++ + + K ALEK +++ES K I+
Sbjct: 413 LREKLADYKNKVDDAWDLLREAT--DKIREANRLFAVNQKNMTALEKKKEAVESGKRGIE 470
Query: 151 NSLHQWKKQLAETNHLNKEYNTL 173
N+L + L E N L E N++
Sbjct: 471 NTLKEGNDILDEANRLADEINSI 493
>sp|P39922|MYS3_HYDAT Myosin heavy chain, clone 203
gb|AAA29216.1| (L35595) myosin heavy chain [Hydra vulgaris]
Length = 539
Score = 43.1 bits (100), Expect = 0.002
Identities = 50/203 (24%), Positives = 83/203 (40%), Gaps = 37/203 (18%)
Query: 26 TKNGEKEENKEIQN--LSENDEKIKLAKQAKQDNLAIGDLESRLKSLKGMDKDAKELVGI 83
TKN + +EI+ E D K+KL K+ K+ + D +L + K+ ++LV
Sbjct: 226 TKNKLESSIREIEQDLKKEKDSKMKLEKEKKKVESDLKDNRDKLSETETRLKETQDLV-- 283
Query: 84 SKAYAHNNEKDRSDFEHFKSRLDKAIDSFNQKSGNDNLKLPG-NIDIDDTKALEKFS--- 139
EK SD E+ K L+ I +K K+ ++++ + L + S
Sbjct: 284 -----TKREKSISDLENAKEGLESQISQLQRKIQELLAKIEELEEELENERKLRQKSELQ 338
Query: 140 -KSLESEKENIQNSLHQ-----------WKKQLAETNHLNKEYNTLD------------K 175
K LES E +Q+ L KK+ AE N L KE L+ K
Sbjct: 339 RKELESRIEELQDQLETAGGATSAQVEVGKKREAECNRLRKEIEALNIANDAAISAIKAK 398
Query: 176 TRLNAQKFQDVHDTSKITPSRLQ 198
T + Q+ ++ K ++L+
Sbjct: 399 TNATIAEIQEENEAMKKAKAKLE 421
>pir||S30782 integrin homolog - yeast (Saccharomyces cerevisiae)
Length = 1726
Score = 42.7 bits (99), Expect = 0.002
Identities = 39/174 (22%), Positives = 83/174 (47%), Gaps = 12/174 (6%)
Query: 35 KEIQNLSEN--DEKIKLAKQAKQDNLAIGDLESRLKSLKGMDKDAKELVGISKAYAHNNE 92
KE++ E+ +EKI+L K+A + + L + L+SL +K+ ++L K Y
Sbjct: 1043 KEVKENEEHLKEEKIQLEKEATETKQQLNSLRANLESL---EKEHEDLAAQLKKYEEQIA 1099
Query: 93 KDRSDFEHFKSRLDKAIDSFNQKSGNDNLKLPGNIDIDDTKALEKFSKSLESEKENIQNS 152
+ S+L+ I S Q+ N+++K + + KA++ S+ + K++ ++
Sbjct: 1100 NKERQYNEEISQLNDEITSTQQE--NESIKKKNDELEGEVKAMKSTSEEQSNLKKSEIDA 1157
Query: 153 LHQWKKQLAETNHLN-----KEYNTLDKTRLNAQKFQDVHDTSKITPSRLQDLL 201
L+ K+L + N N + +++ + ++ QD + + S L+D L
Sbjct: 1158 LNLQIKELKKKNETNEASLLESIKSIESETVKIKELQDECNFKEKEVSELEDKL 1211
>ref|NP_594789.1| (NC_003424) putative transcriptional regulator [Schizosaccharomyces
pombe]
pir||T38023 probable transcription regulator - fission yeast
(Schizosaccharomyces pombe)
emb|CAB11234.1| (Z98598) putative transcriptional regulator [Schizosaccharomyces
pombe]
Length = 630
Score = 42.7 bits (99), Expect = 0.002
Identities = 39/184 (21%), Positives = 88/184 (47%), Gaps = 18/184 (9%)
Query: 35 KEIQNLSENDEKIKLAKQAKQDNLAIGDLESRLKSLKGMDKDAKELVGIS-----KAYAH 89
++I E EK+ + Q GDL++++K L+ + K + KA
Sbjct: 9 EKIAIFDEVYEKLSASNSVSQKEKLEGDLKTQIKKLQRLRDQIKTWASSNDIKDKKALLE 68
Query: 90 NNEKDRSDFEHFKS-RLDKAIDSFNQKSGNDNLKL-PGNIDIDDT--------KALEKFS 139
N + E FK+ + I +F+++ + KL P + DT + LE+ +
Sbjct: 69 NRRLIEAKMEEFKAVEREMKIKAFSKEGLSIASKLDPKEKEKQDTIQWISNAVEELERQA 128
Query: 140 KSLESEKENIQNSLHQWKKQLAETNHLNKEYNTLDKTRLNAQKFQDVH---DTSKITPSR 196
+ +E+E E+++ + + KK L++ +HL++ + +++ + + K + + + S+I+P
Sbjct: 129 ELIEAEAESLKATFKRGKKDLSKLSHLSELESRIERHKWHQDKLELIMRRLENSQISPEA 188
Query: 197 LQDL 200
+ D+
Sbjct: 189 VNDI 192
>gb|AAB00143.1| (L03188) putative [Saccharomyces cerevisiae]
Length = 1015
Score = 42.7 bits (99), Expect = 0.002
Identities = 39/174 (22%), Positives = 83/174 (47%), Gaps = 12/174 (6%)
Query: 35 KEIQNLSEN--DEKIKLAKQAKQDNLAIGDLESRLKSLKGMDKDAKELVGISKAYAHNNE 92
KE++ E+ +EKI+L K+A + + L + L+SL +K+ ++L K Y
Sbjct: 332 KEVKENEEHLKEEKIQLEKEATETKQQLNSLRANLESL---EKEHEDLAAQLKKYEEQIA 388
Query: 93 KDRSDFEHFKSRLDKAIDSFNQKSGNDNLKLPGNIDIDDTKALEKFSKSLESEKENIQNS 152
+ S+L+ I S Q+ N+++K + + KA++ S+ + K++ ++
Sbjct: 389 NKERQYNEEISQLNDEITSTQQE--NESIKKKNDELEGEVKAMKSTSEEQSNLKKSEIDA 446
Query: 153 LHQWKKQLAETNHLN-----KEYNTLDKTRLNAQKFQDVHDTSKITPSRLQDLL 201
L+ K+L + N N + +++ + ++ QD + + S L+D L
Sbjct: 447 LNLQIKELKKKNETNEASLLESIKSIESETVKIKELQDECNFKEKEVSELEDKL 500
>ref|NP_623083.1| (NC_003869) Chromosome segregation ATPases [Thermoanaerobacter
tengcongensis]
gb|AAM24687.1| (AE013104) Chromosome segregation ATPases [Thermoanaerobacter
tengcongensis]
Length = 1189
Score = 42.7 bits (99), Expect = 0.002
Identities = 36/141 (25%), Positives = 67/141 (46%), Gaps = 7/141 (4%)
Query: 17 YHTQRVGSHTKNGEKEENKEIQNLSENDEKIKLAKQAKQDNLAI--GDLESRLKSLKGMD 74
Y +R TK G+ KEIQNL E + I + + + ++I ++E LK ++
Sbjct: 721 YINERELEATKQGKDFVEKEIQNLEEKMQDISVEIKELDEIISIYRKEIEEESLKLKALE 780
Query: 75 KDAKELVGISKAYAHNNEKDRSDFEHFKSRLDK---AIDSFNQKSGND--NLKLPGNIDI 129
+ +L + K ++ N K+R + F+ +L + I +K N+ NLK
Sbjct: 781 VEKDKLEELVKGFSGQNSKNRDELSIFEKQLTELKIEIAKVGEKLQNEVNNLKEKEREFK 840
Query: 130 DDTKALEKFSKSLESEKENIQ 150
+ KA+++ +ES K +I+
Sbjct: 841 EVLKAIKEKEVQIESMKRSIE 861
>ref|NP_010225.1| (NC_001136) involved intracellular protein transport, coiled-coil
protein necessary for protein transport from ER to Golgi;
Uso1p [Saccharomyces cerevisiae]
pir||S67593 transport protein USO1 - yeast (Saccharomyces cerevisiae)
emb|CAA98621.1| (Z74106) ORF YDL058w [Saccharomyces cerevisiae]
Length = 1790
Score = 42.4 bits (98), Expect = 0.003
Identities = 39/174 (22%), Positives = 83/174 (47%), Gaps = 12/174 (6%)
Query: 35 KEIQNLSEN--DEKIKLAKQAKQDNLAIGDLESRLKSLKGMDKDAKELVGISKAYAHNNE 92
KE++ E+ +EKI+L K+A + + L + L+SL +K+ ++L K Y
Sbjct: 1113 KEVKENEEHLKEEKIQLEKEATETKQQLNSLRANLESL---EKEHEDLAAQLKKYEEQIA 1169
Query: 93 KDRSDFEHFKSRLDKAIDSFNQKSGNDNLKLPGNIDIDDTKALEKFSKSLESEKENIQNS 152
+ S+L+ I S Q+ N+++K + + KA++ S+ + K++ ++
Sbjct: 1170 NKERQYNEEISQLNDEITSTQQE--NESIKKKNDELEGEVKAMKSTSEEQSNLKKSEIDA 1227
Query: 153 LHQWKKQLAETNHLN-----KEYNTLDKTRLNAQKFQDVHDTSKITPSRLQDLL 201
L+ K+L + N N + +++ + ++ QD + + S L+D L
Sbjct: 1228 LNLQIKELKKKNETNEASLLESIKSVESETVKIKELQDECNFKEKEVSELEDKL 1281
>emb|CAB39037.2| (AL034559) hypothetical protein, PFC0960c [Plasmodium falciparum 3D7]
Length = 1946
Score = 42.4 bits (98), Expect = 0.003
Identities = 53/208 (25%), Positives = 91/208 (43%), Gaps = 42/208 (20%)
Query: 7 NYNPSLMVRDYHTQRVGSHTKNGEKEENKEI-----QNLSENDEKIKLA-----KQAKQD 56
N N L + Q HT N K+EN++I +N ++ E ++ A Q K
Sbjct: 1531 NKNKKLNNKLKENQNNYEHTLNNIKKENQQIIEREKKNFTQKVESLEHAFKQSYNQLKDQ 1590
Query: 57 NLAIGDLESRLKSLKGMDKDAKE-----------LVGISKAYAHNNEKDRSDFEHFKSRL 105
N +L+ ++K LK +++D K L+ +K Y+ EK ++ K
Sbjct: 1591 N---ENLQQQIKQLKNVNQDIKTNSKNLKNVNEILIKETKNYSQQKEKFIKGLKNIKQAY 1647
Query: 106 DKA--------IDSFN--QKSGNDN---LKLPGNIDIDDTKALEKFSKSLESEKENIQNS 152
K I++F +K DN L + NI +++ K L L+S+ + QN
Sbjct: 1648 IKLKNENQQLKINAFEYIKKDVQDNYVTLNVHNNI-LNEQKKLFVQIDILKSQVDQKQNI 1706
Query: 153 LHQWKKQLAETNH----LNKEYNTLDKT 176
++ K+Q+ + NH +NKE L+ T
Sbjct: 1707 INNMKEQIEDVNHKIASINKEKEELNTT 1734
>sp|P25386|USO1_YEAST Intracellular protein transport protein USO1
emb|CAA38253.1| (X54378) Uso1 protein [Saccharomyces cerevisiae]
Length = 1790
Score = 42.4 bits (98), Expect = 0.003
Identities = 39/174 (22%), Positives = 83/174 (47%), Gaps = 12/174 (6%)
Query: 35 KEIQNLSEN--DEKIKLAKQAKQDNLAIGDLESRLKSLKGMDKDAKELVGISKAYAHNNE 92
KE++ E+ +EKI+L K+A + + L + L+SL +K+ ++L K Y
Sbjct: 1113 KEVKENEEHLKEEKIQLEKEATETKQQLNSLRANLESL---EKEHEDLAAQLKKYEEQIA 1169
Query: 93 KDRSDFEHFKSRLDKAIDSFNQKSGNDNLKLPGNIDIDDTKALEKFSKSLESEKENIQNS 152
+ S+L+ I S Q+ N+++K + + KA++ S+ + K++ ++
Sbjct: 1170 NKERQYNEEISQLNDEITSTQQE--NESIKKKNDELEGEVKAMKSTSEEQSNLKKSEIDA 1227
Query: 153 LHQWKKQLAETNHLN-----KEYNTLDKTRLNAQKFQDVHDTSKITPSRLQDLL 201
L+ K+L + N N + +++ + ++ QD + + S L+D L
Sbjct: 1228 LNLQIKELKKKNETNEASLLESIKSVESETVKIKELQDECNFKEKEVSELEDKL 1281
>emb|CAA98620.1| (Z74105) ORF YDL058w [Saccharomyces cerevisiae]
Length = 1268
Score = 42.4 bits (98), Expect = 0.003
Identities = 39/174 (22%), Positives = 83/174 (47%), Gaps = 12/174 (6%)
Query: 35 KEIQNLSEN--DEKIKLAKQAKQDNLAIGDLESRLKSLKGMDKDAKELVGISKAYAHNNE 92
KE++ E+ +EKI+L K+A + + L + L+SL +K+ ++L K Y
Sbjct: 591 KEVKENEEHLKEEKIQLEKEATETKQQLNSLRANLESL---EKEHEDLAAQLKKYEEQIA 647
Query: 93 KDRSDFEHFKSRLDKAIDSFNQKSGNDNLKLPGNIDIDDTKALEKFSKSLESEKENIQNS 152
+ S+L+ I S Q+ N+++K + + KA++ S+ + K++ ++
Sbjct: 648 NKERQYNEEISQLNDEITSTQQE--NESIKKKNDELEGEVKAMKSTSEEQSNLKKSEIDA 705
Query: 153 LHQWKKQLAETNHLN-----KEYNTLDKTRLNAQKFQDVHDTSKITPSRLQDLL 201
L+ K+L + N N + +++ + ++ QD + + S L+D L
Sbjct: 706 LNLQIKELKKKNETNEASLLESIKSVESETVKIKELQDECNFKEKEVSELEDKL 759
>ref|NP_473326.1| (NC_000521) predicted using hexExon; MAL3P7.21 (PFC0960c),
Hypothetical protein, len: 1929 aa [Plasmodium
falciparum]
Length = 1928
Score = 42.4 bits (98), Expect = 0.003
Identities = 53/208 (25%), Positives = 91/208 (43%), Gaps = 42/208 (20%)
Query: 7 NYNPSLMVRDYHTQRVGSHTKNGEKEENKEI-----QNLSENDEKIKLA-----KQAKQD 56
N N L + Q HT N K+EN++I +N ++ E ++ A Q K
Sbjct: 1531 NKNKKLNNKLKENQNNYEHTLNNIKKENQQIIEREKKNFTQKVESLEHAFKQSYNQLKDQ 1590
Query: 57 NLAIGDLESRLKSLKGMDKDAKE-----------LVGISKAYAHNNEKDRSDFEHFKSRL 105
N +L+ ++K LK +++D K L+ +K Y+ EK ++ K
Sbjct: 1591 N---ENLQQQIKQLKNVNQDIKTNSKNLKNVNEILIKETKNYSQQKEKFIKGLKNIKQAY 1647
Query: 106 DKA--------IDSFN--QKSGNDN---LKLPGNIDIDDTKALEKFSKSLESEKENIQNS 152
K I++F +K DN L + NI +++ K L L+S+ + QN
Sbjct: 1648 IKLKNENQQLKINAFEYIKKDVQDNYVTLNVHNNI-LNEQKKLFVQIDILKSQVDQKQNI 1706
Query: 153 LHQWKKQLAETNH----LNKEYNTLDKT 176
++ K+Q+ + NH +NKE L+ T
Sbjct: 1707 INNMKEQIEDVNHKIASINKEKEELNTT 1734
>ref|NP_663193.1| (NC_004062) hypothetical protein [Phthorimaea operculella
granulovirus]
gb|AAM70226.1| (AF499596) hypothetical protein [Phthorimaea operculella
granulovirus]
Length = 536
Score = 42.0 bits (97), Expect = 0.004
Identities = 34/168 (20%), Positives = 80/168 (47%), Gaps = 22/168 (13%)
Query: 35 KEIQNLSENDEKIKLAKQAKQDNL--------AIGDLESRLKSLKG-MDKDAKELVGISK 85
K+I+NL++N+ K+KL ++ Q + + D E+ +KS++ D+ KE+
Sbjct: 115 KDIENLTQNNNKLKLENESLQKKIEKIDIRQKCLNDYENHIKSMQNQFDEQTKEM---QN 171
Query: 86 AYAHNNEKDRSDFEHFKSRLDKAIDSFNQKSGNDNLKLPGNIDIDDTKALEKFSKSLESE 145
+ +K + F+ K +L + ++ Q S +++ N + K E+ + +++
Sbjct: 172 NFDEEKKKLQKQFDQEKKKLQRQLEKKKQDSSSEH-----NEEEYAKKLEEECANKIKTL 226
Query: 146 KENIQNSLHQWKKQLAETNH----LNKEYNTLDKTRL-NAQKFQDVHD 188
+E N + + ++ E + + +E+ KT + N ++ Q H+
Sbjct: 227 EEECANKIKTLEDKIQEYENKIKIMEEEHKKQIKTMIQNERELQQSHE 274
>gb|EAA05893.1| (AAAB01008839) agCP14535 [Anopheles gambiae str. PEST]
Length = 7667
Score = 42.0 bits (97), Expect = 0.004
Identities = 44/204 (21%), Positives = 86/204 (41%), Gaps = 24/204 (11%)
Query: 4 ISNNYNPSLMVRDYHTQRVGSHTKNGEKEENKEIQNLSENDEKIKLAKQAKQDNLAIGDL 63
+S+N N + + H Q + +N K+ +K+++ + ++ + AK A++ GD+
Sbjct: 6373 LSSNVNSEIKLCQRHAQTIREFEENAFKDVSKQVREIMKDCSEEGKAKLAQE----FGDI 6428
Query: 64 ESRLKSLKGMDKDAKELVGISKAYAHNNEKDRSDFEHFKSRLDKAIDSFNQKSGNDNLKL 123
ES+LK L ++ A+++ + R +FE K R+ ++ D
Sbjct: 6429 ESKLKEL--VESCARKI-----EFMEREHGKRREFEGRKDRVWNWLNEAESIVSADIRTT 6481
Query: 124 PGNIDIDDTKALEKFSKSLESEKENIQNSLHQWKKQLAETNHLNKEYNTLDKTRLNAQ-- 181
I D + +K E K + ++K + T N LDKT +N Q
Sbjct: 6482 SYEILKDQKQKFDKLCGECEVMK-GVVKEAEEYKSAILPT------LNELDKTNINNQVK 6534
Query: 182 ----KFQDVHDTSKITPSRLQDLL 201
K+ + + K+ +L+D L
Sbjct: 6535 VMREKWNAISNVLKVKCKKLEDHL 6558
>ref|NP_562076.1| (NC_003366) hypothetical protein [Clostridium perfringens]
dbj|BAB80866.1| (AP003189) hypothetical protein [Clostridium perfringens]
Length = 301
Score = 41.2 bits (95), Expect = 0.007
Identities = 39/161 (24%), Positives = 76/161 (46%), Gaps = 9/161 (5%)
Query: 1 MSKISNNYNPSLMVRDYHTQRVGSHTKNGEKEENKEIQNLSENDEK-IKLAKQAKQDNLA 59
++KI+ + SL + + +R ++ I+ L +E+ I+ K K+DN A
Sbjct: 69 LNKINQLFLTSLQMSEDAGKRAEEEFVKKLSIKDVTIERLQRREEELIERDKTLKEDNKA 128
Query: 60 -IGDLESRLKSLKGMDKDAKELVGISKAYAHNNEKDRSDFEHFKSRLDKAIDSFNQKSGN 118
++E +++K ++KD L + EK++ + KS ++S K N
Sbjct: 129 KTKEIEELKENIKTLEKDKSTLSQLVSRNYDLIEKNKEEIASLKS-----LESL--KGEN 181
Query: 119 DNLKLPGNIDIDDTKALEKFSKSLESEKENIQNSLHQWKKQ 159
+ L+ G D K E KSLE EKE+++ L+ ++++
Sbjct: 182 EELRNKGEEDRASLKERESHIKSLELEKESLKEKLNFYEEK 222
>ref|NP_473074.1| (NC_000910) BRAHMA ortholog (DNA helicase superfamily II)
[Plasmodium falciparum]
pir||F71607 DNA helicase II BRAHMA homolog PFB0730w - malaria parasite
(Plasmodium falciparum)
gb|AAC71935.1| (AE001414) BRAHMA ortholog (DNA helicase superfamily II)
[Plasmodium falciparum 3D7]
Length = 1997
Score = 41.2 bits (95), Expect = 0.007
Identities = 43/182 (23%), Positives = 81/182 (43%), Gaps = 18/182 (9%)
Query: 20 QRVGSHTKNGEKEENKEIQNLSENDEKIKLAKQAKQDNLAIGDLESRLKSLKGMDKDAKE 79
++ + K+ E E KE N +E D++++ K+ N ++E++ + +KD +
Sbjct: 133 EKNNKNEKDDEMENKKEKNNKNEKDDEMENKKEKNNKNEKDDEMENKKEKNNKNEKD--D 190
Query: 80 LVGISKAYAHNNEKDRSDFEHFKSRLDKAIDSFNQKSGN-DNLKLPGNIDIDDTKALEKF 138
+ K + NEKD + E+ K + +K N+K +N K N + D + E
Sbjct: 191 EMENKKEKNNKNEKD-DEMENKKEKNNK-----NEKDDEMENKKEKNNKNEKDDEIKENM 244
Query: 139 SKSLESEKENIQNSLHQWKKQLAETNHLNKEYNTLDKTRLNAQKFQDVHDTSKITPSRLQ 198
K +E++ N N L+ + N+L E + +K L+ D I +LQ
Sbjct: 245 DKVMENQL-NQSNILYNKDRIRKNRNNLKDEKDVSNKNILD--------DNKDIVEFKLQ 295
Query: 199 DL 200
D+
Sbjct: 296 DI 297
>ref|NP_060041.1| (NM_017571) hypothetical protein LOC55580 [Homo sapiens]
gb|AAF17206.1|AF112218_1 (AF112218) unknown [Homo sapiens]
Length = 742
Score = 41.2 bits (95), Expect = 0.007
Identities = 35/128 (27%), Positives = 55/128 (42%), Gaps = 19/128 (14%)
Query: 92 EKDRSDFEHFKSRLDKAIDSF-------------NQKSGNDNLKLPGNIDIDDTKA---- 134
E++ S+ E +L K +DSF N + +NL+L N++ +
Sbjct: 587 EQENSELERENRKLKKTLDSFKNLTFQLESLEKENSQLDEENLELRRNVESLKCASMKMA 646
Query: 135 -LEKFSKSLESEKENIQNSLHQWKKQLAETNHLNKEYNTLDKTRLNAQK-FQDVHDTSKI 192
L+ +K LESEKE ++ L K +T L Y LD QK ++ + +
Sbjct: 647 QLQLENKELESEKEQLKKGLELLKASFKKTERLEVSYQGLDIENQRLQKTLENSNKKIQQ 706
Query: 193 TPSRLQDL 200
S LQDL
Sbjct: 707 LESELQDL 714
>dbj|BAA13448.1| (D87742) Similar to Human C219-reactive peptide (L34688) [Homo
sapiens]
Length = 1193
Score = 40.8 bits (94), Expect = 0.009
Identities = 39/179 (21%), Positives = 77/179 (42%), Gaps = 26/179 (14%)
Query: 20 QRVGSHTKNGEKEENKEIQNLSENDEKIKLAK----QAKQDNLAIGD----LESRLKSLK 71
Q++ K KE + +Q LS ++KIK +K + ++ N+ + D + ++K+L+
Sbjct: 500 QQISEKLKTIMKENTELVQKLSNYEQKIKESKKHVQETRKQNMILSDEAIKYKDKIKTLE 559
Query: 72 G----MDKDAKELVGISKAYAHNNEKDRSDFEHFKSRLDKAIDSFNQKSGNDNLKLPGNI 127
+D AK L + ++ N K++ K ++K D + + + I
Sbjct: 560 KNQEILDDTAKNLRVMLESEREQNVKNQDLISENKKSIEKLKDVISMNASEFS---EVQI 616
Query: 128 DIDDTKALEKFSKS-----------LESEKENIQNSLHQWKKQLAETNHLNKEYNTLDK 175
+++ K E+ KS L+ +KE +Q + W K AE + K + K
Sbjct: 617 ALNEAKLSEEKVKSECHRVQEENARLKKKKEQLQQEIEDWSKLHAELSEQIKSFEKSQK 675
>ref|NP_473054.1| (NC_000910) hypothetical protein [Plasmodium falciparum]
pir||H71609 hypothetical protein PFB0630c - malaria parasite (Plasmodium
falciparum)
gb|AAC71915.1| (AE001407) hypothetical protein [Plasmodium falciparum 3D7]
Length = 1166
Score = 40.8 bits (94), Expect = 0.009
Identities = 36/151 (23%), Positives = 65/151 (42%), Gaps = 12/151 (7%)
Query: 27 KNGEKEENKEIQNLSENDEKIKLAKQAKQDNLAIGDLESRLKSLKGMDKDAKELVGISKA 86
KN E E N+E+Q +N+ K K K+ K D D E + + DK+ K
Sbjct: 629 KNEEMEPNQEMQQDKDNELKEKNDKEEKNDQEEKNDQEEKNDKEEKNDKEEKNDQEKKND 688
Query: 87 YAHNNEKDRSDFEHFKSRLDKAIDSFNQKSGNDNLKLPGNIDIDDTKALEKFSKSLESEK 146
N E ++K ++ + + S + L +D++K ++ F ++EK
Sbjct: 689 QEEKNNVHIDKQEKINENVEKTLNLYQKYSLYNLYDLS---KLDESKVVDFF---YDNEK 742
Query: 147 ENIQNSLHQWKKQLAETNHLNKEYNTLDKTR 177
EN N Q + N +N+++N ++ R
Sbjct: 743 ENFINFASQ------KMNEINRKHNDAERGR 767
>ref|NP_562632.1| (NC_003366) chromosome partition protein [Clostridium perfringens]
dbj|BAB81422.1| (AP003191) chromosome partition protein [Clostridium perfringens]
Length = 1185
Score = 40.8 bits (94), Expect = 0.009
Identities = 39/171 (22%), Positives = 79/171 (45%), Gaps = 21/171 (12%)
Query: 27 KNGEKEENKEIQNLSENDEKIKLAKQAKQD-----NLAIGDLESRLKSLKGMDKDAKELV 81
KN E KE++ L+ + E++ + KQ D NL + DL +++K++ K +
Sbjct: 696 KNEEHILTKELEKLNRDQEELSIKKQEIIDKIYEKNLELADLNNKIKNVNDETFKIKNSI 755
Query: 82 GISKAYAHNNEKDRSDFEHFKSRLDKAIDSFNQK-SGNDNLKLPGNIDIDD-TKALEKFS 139
+ E + +D + K ++ K I+ N+K S +N ++ + + + K E+ S
Sbjct: 756 -------KSLELELNDIDSRKIKIVKEIEIVNEKISQFENKEVTNSEKVKELDKKREELS 808
Query: 140 KSLESEKENIQN-SLHQWKKQLA------ETNHLNKEYNTLDKTRLNAQKF 183
K+L K+ + N +++ K Q E N +N ++ +N K+
Sbjct: 809 KTLSKYKDKLTNMKINKAKLQEVIEGREKEANRINSSIEEVENKLINITKY 859
>ref|XP_046126.3| (XM_046126) KIAA0268 protein [Homo sapiens]
Length = 1124
Score = 40.8 bits (94), Expect = 0.009
Identities = 39/179 (21%), Positives = 77/179 (42%), Gaps = 26/179 (14%)
Query: 20 QRVGSHTKNGEKEENKEIQNLSENDEKIKLAK----QAKQDNLAIGD----LESRLKSLK 71
Q++ K KE + +Q LS ++KIK +K + ++ N+ + D + ++K+L+
Sbjct: 431 QQISEKLKTIMKENTELVQKLSNYEQKIKESKKHVQETRKQNMILSDEAIKYKDKIKTLE 490
Query: 72 G----MDKDAKELVGISKAYAHNNEKDRSDFEHFKSRLDKAIDSFNQKSGNDNLKLPGNI 127
+D AK L + ++ N K++ K ++K D + + + I
Sbjct: 491 KNQEILDDTAKNLRVMLESEREQNVKNQDLISENKKSIEKLKDVISMNASEFS---EVQI 547
Query: 128 DIDDTKALEKFSKS-----------LESEKENIQNSLHQWKKQLAETNHLNKEYNTLDK 175
+++ K E+ KS L+ +KE +Q + W K AE + K + K
Sbjct: 548 ALNEAKLSEEKVKSECHRVQEENARLKKKKEQLQQEIEDWSKLHAELSEQIKSFEKSQK 606
Database: /home/scwang/download_20020708_db/nr
Posted date: Aug 7, 2002 12:55 PM
Number of letters in database: 324,149,939
Number of sequences in database: 1,026,957
Lambda K H
0.306 0.125 0.334
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 121,569,524
Number of Sequences: 1026957
Number of extensions: 4828187
Number of successful extensions: 18907
Number of sequences better than 1.0e-02: 34
Number of HSP's better than 0.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 33
Number of HSP's that attempted gapping in prelim test: 18845
Number of HSP's gapped (non-prelim): 81
length of query: 202
length of database: 324,149,939
effective HSP length: 115
effective length of query: 87
effective length of database: 206,049,884
effective search space: 17926339908
effective search space used: 17926339908
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 43 (22.0 bits)
S2: 94 (40.8 bits)