BLASTP 2.2.1 [Apr-13-2001]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|15645023|ref|NP_207193.1| conserved hypothetical
protein [Helicobacter pylori 26695]
(222 letters)
Database: /home/scwang/download_20020708_db/nr
1,026,957 sequences; 324,149,939 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_207193.1| (NC_000915) conserved hypothetical protein... 437 e-122
ref|NP_223703.1| (NC_000921) putative [Helicobacter pylori ... 419 e-116
gb|AAD01685.1| (AF021091) hypothetical protein [Helicobacte... 411 e-114
ref|NP_281891.1| (NC_002163) hypothetical protein Cj0719c [... 172 2e-42
ref|NP_213191.1| (NC_000918) hypothetical protein [Aquifex ... 142 4e-33
ref|NP_245049.1| (NC_002663) unknown [Pasteurella multocida... 132 3e-30
ref|NP_438263.1| (NC_000907) conserved hypothetical protein... 131 6e-30
ref|NP_348739.1| (NC_003030) Predicted enzyme with a TIM-ba... 128 4e-29
ref|NP_562770.1| (NC_003366) conserved hypothetical protein... 122 2e-27
ref|NP_389421.1| (NC_000964) similar to hypothetical protei... 118 5e-26
ref|NP_623200.1| (NC_003869) predicted enzyme with a TIM-ba... 117 7e-26
ref|NP_229529.1| (NC_000853) conserved hypothetical protein... 117 1e-25
ref|NP_283062.1| (NC_003116) hypothetical protein NMA0217 [... 115 3e-25
ref|NP_603458.1| (NC_003454) Proline synthetase associated ... 115 4e-25
ref|NP_593877.1| (NC_003424) conserved hypothetical UPF0001... 114 6e-25
ref|NP_484530.1| (NC_003272) hypothetical protein [Nostoc s... 114 6e-25
gb|AAC17617.1| (AC002131) Similar to hypothetical protein F... 114 8e-25
gb|AAF57017.1| (AE003772) CG1983 gene product [Drosophila m... 114 8e-25
ref|NP_273118.1| (NC_003112) conserved hypothetical protein... 113 1e-24
ref|NP_404558.1| (NC_003143) conserved hypothetical protein... 113 1e-24
ref|NP_567760.1| (NM_118820) putative Proline synthetase as... 112 2e-24
ref|NP_662693.1| (NC_002932) conserved hypothetical protein... 112 2e-24
gb|AAK52989.1|AF375405_1 (AF375405) AT4g26860/F10M23_200 [A... 112 2e-24
gb|EAA00912.1| (AAAB01008987) agCP11992 [Anopheles gambiae ... 112 3e-24
ref|NP_643234.1| (NC_003919) conserved hypothetical protein... 112 4e-24
ref|NP_230115.1| (NC_002505) conserved hypothetical protein... 109 2e-23
pir||T46722 conserved hypothetical protein [imported] - Lei... 109 2e-23
ref|NP_563897.1| (NM_101065) putative Proline synthetase as... 109 3e-23
sp|P52055|YPI1_VIBAL HYPOTHETICAL PROTEIN IN PILT-PROC INTE... 109 3e-23
ref|NP_299006.1| (NC_002488) conserved hypothetical protein... 109 3e-23
ref|NP_638104.1| (NC_003902) conserved hypothetical protein... 108 4e-23
ref|NP_249085.1| (NC_002516) conserved hypothetical protein... 108 6e-23
ref|NP_473398.1| (NM_054057) proline synthetase co-transcri... 107 1e-22
ref|NP_495001.1| (NM_062600) F09E5.8.p [Caenorhabditis eleg... 106 2e-22
ref|NP_268025.1| (NC_002662) conserved hypothetical protein... 106 2e-22
ref|NP_009129.1| (NM_007198) proline synthetase co-transcri... 105 3e-22
pir||T04809 hypothetical protein F10M23.200 - Arabidopsis t... 105 3e-22
emb|CAC21426.1| (AJ297409) ylmE [Thermus thermophilus] 104 6e-22
ref|NP_633699.1| (NC_003901) conserved protein [Methanosarc... 103 1e-21
ref|NP_289523.1| (NC_002655) orf, hypothetical protein [Esc... 103 1e-21
ref|NP_615457.1| (NC_003552) conserved hypothetical protein... 103 2e-21
ref|NP_387436.1| (NC_003047) CONSERVED HYPOTHETICAL PROTEIN... 103 2e-21
emb|CAA75617.1| (Y15422) hypothetical protein [Lactococcus ... 102 2e-21
ref|NP_355677.1| (NC_003062) AGR_C_4983p [Agrobacterium tum... 102 3e-21
ref|NP_462016.1| (NC_003197) putative enzyme with a TIM-bar... 100 2e-20
ref|NP_457492.1| (NC_003198) conserved hypothetical protein... 100 2e-20
ref|NP_520804.1| (NC_003295) CONSERVED HYPOTHETICAL PROTEIN... 98 6e-20
ref|NP_346104.1| (NC_003028) ylmE protein [Streptococcus pn... 96 4e-19
ref|NP_657870.1| (NC_003995) UPF0001, Uncharacterized prote... 96 4e-19
ref|NP_243416.1| (NC_002570) BH2550~unknown conserved prote... 95 5e-19
ref|NP_442806.1| (NC_000911) hypothetical protein [Synechoc... 95 6e-19
ref|NP_009517.1| (NC_001134) Hypothetical ORF; Ybl036cp [Sa... 94 8e-19
ref|NP_359102.1| (NC_003098) Conserved hypothetical protein... 94 8e-19
ref|NP_539159.1| (NC_003317) PHOSPHATE REGULON SENSOR PROTE... 94 1e-18
ref|NP_471471.1| (NC_003212) similar to unknown proteins [L... 93 2e-18
ref|NP_105035.1| (NC_002678) hypothetical protein [Mesorhiz... 92 4e-18
ref|NP_465555.1| (NC_003210) similar to unknown proteins [L... 92 4e-18
ref|NP_269593.1| (NC_002737) conserved hypothetical protein... 88 8e-17
ref|NP_607605.1| (NC_003485) conserved hypothetical protein... 88 8e-17
ref|NP_645888.1| (NC_003923) conserved hypothetical protein... 87 1e-16
pdb|1CT5|A Chain A, Crystal Structure Of Yeast Hypothetical... 87 1e-16
ref|NP_371712.1| (NC_002758) conserved hypothetical protein... 86 2e-16
ref|NP_522244.1| (NC_003296) CONSERVED HYPOTHETICAL PROTEIN... 85 5e-16
ref|NP_422539.1| (NC_002696) conserved hypothetical protein... 85 5e-16
ref|NP_660861.1| (NC_004061) hypothetical 25.8 kD protein i... 80 2e-14
ref|NP_295091.1| (NC_001263) conserved hypothetical protein... 79 3e-14
ref|NP_626339.1| (NC_003888) conserved hypothetical protein... 78 6e-14
emb|CAB66326.1| (Y08964) putative YPT5 protein [Corynebacte... 71 1e-11
sp|O24748|YFZ1_CORGL Hypothetical 24.0 kDa protein in FTSZ ... 69 3e-11
ref|NP_601355.1| (NC_003450) COG0325:Predicted enzyme with ... 66 2e-10
ref|NP_240355.1| (NC_002528) hypothetical protein [Buchnera... 66 2e-10
sp|Q9CCE2|YL48_MYCLE Hypothetical protein ML0919 66 3e-10
ref|NP_301702.1| (NC_002677) possible DNA-binding protein [... 66 3e-10
dbj|BAB99546.1| (AP005280) Predicted enzyme with a TIM-barr... 66 3e-10
dbj|BAB86202.1| (AP003735) hypothetical protein~similar to ... 65 5e-10
gb|EAA02478.1| (AAAB01004768) agCP4002 [Anopheles gambiae s... 65 7e-10
ref|NP_216664.1| (NC_000962) hypothetical protein Rv2148c [... 60 2e-08
ref|NP_336677.1| (NC_002755) conserved hypothetical protein... 60 2e-08
ref|XP_059934.2| (XM_059934) similar to Proline synthetase ... 48 9e-05
>ref|NP_207193.1| (NC_000915) conserved hypothetical protein [Helicobacter pylori
26695]
sp|O25156|Y395_HELPY Hypothetical protein HP0395
pir||C64569 conserved hypothetical protein HP0395 - Helicobacter pylori
(strain 26695)
gb|AAD07459.1| (AE000555) conserved hypothetical protein [Helicobacter pylori
26695]
Length = 222
Score = 437 bits (1123), Expect = e-122
Identities = 222/222 (100%), Positives = 222/222 (100%)
Query: 1 MLDYRQKIDALITKIEKARTAYSRHHIVKIVAVSKNASPEAIQHYYNCSQRAFGENKVQD 60
MLDYRQKIDALITKIEKARTAYSRHHIVKIVAVSKNASPEAIQHYYNCSQRAFGENKVQD
Sbjct: 1 MLDYRQKIDALITKIEKARTAYSRHHIVKIVAVSKNASPEAIQHYYNCSQRAFGENKVQD 60
Query: 61 LKTKMHSLEHLPLEWHMIGSLQENKINALLSLKPALLHSLDSLKLALKIEKRCEILGVNL 120
LKTKMHSLEHLPLEWHMIGSLQENKINALLSLKPALLHSLDSLKLALKIEKRCEILGVNL
Sbjct: 61 LKTKMHSLEHLPLEWHMIGSLQENKINALLSLKPALLHSLDSLKLALKIEKRCEILGVNL 120
Query: 121 NALLQVNSAYEESKSGVVPEEALEIYSQISETCKHLKLKGLMCIGAHTDDEKEIEKSFIT 180
NALLQVNSAYEESKSGVVPEEALEIYSQISETCKHLKLKGLMCIGAHTDDEKEIEKSFIT
Sbjct: 121 NALLQVNSAYEESKSGVVPEEALEIYSQISETCKHLKLKGLMCIGAHTDDEKEIEKSFIT 180
Query: 181 TKKLFDQIKNASVLSMGMSDDFELAIACGANLLRIGSFLFKE 222
TKKLFDQIKNASVLSMGMSDDFELAIACGANLLRIGSFLFKE
Sbjct: 181 TKKLFDQIKNASVLSMGMSDDFELAIACGANLLRIGSFLFKE 222
>ref|NP_223703.1| (NC_000921) putative [Helicobacter pylori J99]
sp|Q9ZKF2|Y395_HELPJ Hypothetical protein JHP0986
pir||E71864 hypothetical protein jhp0986 - Helicobacter pylori (strain J99)
gb|AAD06567.1| (AE001527) putative [Helicobacter pylori J99]
Length = 222
Score = 419 bits (1076), Expect = e-116
Identities = 213/222 (95%), Positives = 215/222 (95%)
Query: 1 MLDYRQKIDALITKIEKARTAYSRHHIVKIVAVSKNASPEAIQHYYNCSQRAFGENKVQD 60
MLDYRQ+ID LITKIEKAR AYSRHHIVKIVAVSKNASPEAIQHYYNCSQRAFGENKVQD
Sbjct: 1 MLDYRQRIDTLITKIEKARIAYSRHHIVKIVAVSKNASPEAIQHYYNCSQRAFGENKVQD 60
Query: 61 LKTKMHSLEHLPLEWHMIGSLQENKINALLSLKPALLHSLDSLKLALKIEKRCEILGVNL 120
LK KMHSLEHLPLEWHMIGSLQENKINALLSLKPALLHSLDSLKLALKIEKRCEILGVNL
Sbjct: 61 LKIKMHSLEHLPLEWHMIGSLQENKINALLSLKPALLHSLDSLKLALKIEKRCEILGVNL 120
Query: 121 NALLQVNSAYEESKSGVVPEEALEIYSQISETCKHLKLKGLMCIGAHTDDEKEIEKSFIT 180
NALLQVNSAYEESKSGVVPEEALE YSQISETCK LKLKGLMCIGAHTDDE +IEKSF T
Sbjct: 121 NALLQVNSAYEESKSGVVPEEALETYSQISETCKRLKLKGLMCIGAHTDDETKIEKSFTT 180
Query: 181 TKKLFDQIKNASVLSMGMSDDFELAIACGANLLRIGSFLFKE 222
TKKLFDQIKNASVLSMGMSDDFELAIACGANLLRIGSFLFKE
Sbjct: 181 TKKLFDQIKNASVLSMGMSDDFELAIACGANLLRIGSFLFKE 222
>gb|AAD01685.1| (AF021091) hypothetical protein [Helicobacter pylori]
Length = 222
Score = 411 bits (1056), Expect = e-114
Identities = 211/222 (95%), Positives = 214/222 (96%)
Query: 1 MLDYRQKIDALITKIEKARTAYSRHHIVKIVAVSKNASPEAIQHYYNCSQRAFGENKVQD 60
MLDYRQKIDALITKIEKAR AYSRHHIVKIVAVSKNAS EAIQHYYNCSQRAFGENKVQD
Sbjct: 1 MLDYRQKIDALITKIEKARIAYSRHHIVKIVAVSKNASLEAIQHYYNCSQRAFGENKVQD 60
Query: 61 LKTKMHSLEHLPLEWHMIGSLQENKINALLSLKPALLHSLDSLKLALKIEKRCEILGVNL 120
LKTKMHSLEHLPLEWHMIGSLQENKINALLSLKPALL SLDSLKLALKIEKRCEILGVNL
Sbjct: 61 LKTKMHSLEHLPLEWHMIGSLQENKINALLSLKPALLDSLDSLKLALKIEKRCEILGVNL 120
Query: 121 NALLQVNSAYEESKSGVVPEEALEIYSQISETCKHLKLKGLMCIGAHTDDEKEIEKSFIT 180
NALLQVNSAYEESKSGV+PE LEIYSQISETCK LKLKGLMCIGAH DDEKEIEKSFIT
Sbjct: 121 NALLQVNSAYEESKSGVMPEGTLEIYSQISETCKRLKLKGLMCIGAHADDEKEIEKSFIT 180
Query: 181 TKKLFDQIKNASVLSMGMSDDFELAIACGANLLRIGSFLFKE 222
TKKLFD++KNASVLSMGMS DFELAIACGANLLRIGSFLFKE
Sbjct: 181 TKKLFDRLKNASVLSMGMSCDFELAIACGANLLRIGSFLFKE 222
>ref|NP_281891.1| (NC_002163) hypothetical protein Cj0719c [Campylobacter jejuni]
pir||B81343 hypothetical protein Cj0719c [imported] - Campylobacter jejuni
(strain NCTC 11168)
emb|CAB72993.1| (AL139076) hypothetical protein Cj0719c [Campylobacter jejuni]
Length = 210
Score = 172 bits (436), Expect = 2e-42
Identities = 94/198 (47%), Positives = 131/198 (65%), Gaps = 7/198 (3%)
Query: 28 VKIVAVSKNASPEAIQHYYNCSQRAFGENKVQDLKTKMHSLEH--LPLEWHMIGSLQENK 85
V++VA SK I+ ++ FGEN+VQ L K +L+ L ++WH IG+LQ NK
Sbjct: 13 VRLVAASKYVDASIIEKLFDQGIVEFGENQVQALAQKKENLDEKKLDIKWHFIGTLQSNK 72
Query: 86 INALLSLKPALLHSLDSLKLALKIEKRCEILGVNLNALLQVNSAYEESKSGVVPEEALEI 145
IN L+ KP L HS + +K+A ++KR L LN LL++NSA E SKSG+ P +A+E
Sbjct: 73 INLLIKQKPILWHSCNGIKIAKAMDKR---LDYKLNTLLEINSANENSKSGLDPNQAVEE 129
Query: 146 YSQISETCKHLKLKGLMCIGAHTDDEKEIEKSFITTKKLFD--QIKNASVLSMGMSDDFE 203
Y QI E C +L L G+M IG+H+ D++ I KSF TT K+++ Q A + SMGMS+DFE
Sbjct: 130 YLQIQEECSNLNLCGVMSIGSHSQDKENIIKSFETTFKIYEILQKHGAKICSMGMSNDFE 189
Query: 204 LAIACGANLLRIGSFLFK 221
+AI CG+NL+R+GS LFK
Sbjct: 190 IAIKCGSNLVRLGSILFK 207
>ref|NP_213191.1| (NC_000918) hypothetical protein [Aquifex aeolicus]
sp|O66631|Y274_AQUAE Hypothetical protein AQ_274
pir||C70325 conserved hypothetical protein aq_274 - Aquifex aeolicus
gb|AAC06592.1| (AE000681) hypothetical protein [Aquifex aeolicus]
Length = 228
Score = 142 bits (357), Expect = 4e-33
Identities = 83/223 (37%), Positives = 133/223 (59%), Gaps = 8/223 (3%)
Query: 6 QKIDALITKIEKARTAYSR-HHIVKIVAVSKNASPEAIQHYYNCSQRAFGENKVQDLKTK 64
+++ ++ +I+KA R + K++ SK PE I+ +YNC + +GEN+VQ+ K
Sbjct: 5 ERLSRVLERIQKACERAGRGENCAKLLGASKTVPPEVIREFYNCGLKVYGENRVQEFLKK 64
Query: 65 MHSLEHLPLEWHMIGSLQENKINALLSLKPALLHSLDSLKLALKIEKRCEILGVNLNALL 124
+L+ L LEWH IG LQ NK+ L+ K L+HSLD LA +I+KR + + L+
Sbjct: 65 YEALKDLDLEWHFIGRLQTNKVKYLMG-KVVLIHSLDRKNLADEIQKRAFKNNIVQDVLI 123
Query: 125 QVNSAYEESKSGVVPEEALEIYSQISETCKHLKLKGLMCIGAHTDDEKEIEKSFITTKKL 184
+VN EE+K GV PE E++ E ++K+ GLM I + ++ +++ F ++L
Sbjct: 124 EVNVGGEETKGGVEPENLKELFEYTLE-LPNVKVLGLMTIPPYLENPEDVRPYFRKLREL 182
Query: 185 FDQIK---NASV--LSMGMSDDFELAIACGANLLRIGSFLFKE 222
D+++ N ++ LSMGMS DFE+AI GA ++RIG+ LF E
Sbjct: 183 RDELQREYNVALPHLSMGMSHDFEVAIEEGATIVRIGTLLFGE 225
>ref|NP_245049.1| (NC_002663) unknown [Pasteurella multocida]
gb|AAK02196.1| (AE006046) unknown [Pasteurella multocida]
Length = 233
Score = 132 bits (332), Expect = 3e-30
Identities = 82/201 (40%), Positives = 118/201 (57%), Gaps = 10/201 (4%)
Query: 28 VKIVAVSKNASPEAIQHYYNCSQRAFGENKVQD--LKTKMHSLEHLPLEWHMIGSLQENK 85
VK++AVSK E I Y Q AFGEN VQ+ K + + +++PLEWH IG LQ NK
Sbjct: 28 VKLLAVSKTKPVEDIYQAYQAGQTAFGENYVQEGVEKIQYFAQKNIPLEWHFIGPLQSNK 87
Query: 86 INALLSLKPALLHSLDSLKLALKIEKRCEILGVNLNALLQVNSAYEESKSGVVPEEALEI 145
L++ + +LD K+A ++ ++ LN L+Q+N + E+SKSG+ P E L++
Sbjct: 88 TK-LVAEHFDWMQTLDRKKIADRLNEQRPHYKKPLNVLIQINISDEDSKSGIQPNEMLDL 146
Query: 146 YSQISETCKHLKLKGLMCIGAHTDDEKEIEKSFITTKKLFDQIKNA------SVLSMGMS 199
QI + HL L+GLM I A TDD E++F LF+Q+K A LSMGM+
Sbjct: 147 AKQI-QNLPHLCLRGLMAIPAPTDDLATQEQAFTQMHSLFEQLKQALPDAQIDTLSMGMT 205
Query: 200 DDFELAIACGANLLRIGSFLF 220
DD AI CG+ ++RIG+ +F
Sbjct: 206 DDMASAIQCGSTMVRIGTAIF 226
>ref|NP_438263.1| (NC_000907) conserved hypothetical protein [Haemophilus influenzae
Rd]
sp|P44506|YGGS_HAEIN Protein HI0090
pir||B64142 hypothetical protein HI0090 - Haemophilus influenzae (strain Rd
KW20)
gb|AAC21768.1| (U32694) conserved hypothetical protein [Haemophilus influenzae Rd]
Length = 237
Score = 131 bits (329), Expect = 6e-30
Identities = 88/228 (38%), Positives = 128/228 (55%), Gaps = 11/228 (4%)
Query: 2 LDYRQKIDALITKIEKARTAYSRH-HIVKIVAVSKNASPEAIQHYYNCSQRAFGENKVQD 60
++ + ++ + KIE A +R+ + VK++AVSK AI Y Q AFGEN VQ+
Sbjct: 1 MNIQHNLNLIQQKIETACKEENRNQNTVKLLAVSKTKPISAILSAYQAGQTAFGENYVQE 60
Query: 61 LKTKMHSLEH--LPLEWHMIGSLQENKINALLSLKPALLHSLDSLKLALKIEKRCEILGV 118
K+ E + LEWH IG LQ NK L++ + +LD K+A ++ ++
Sbjct: 61 GVEKIQYFESQGINLEWHFIGPLQSNKTR-LVAEHFDWMQTLDRAKIADRLNEQRPTNKA 119
Query: 119 NLNALLQVNSAYEESKSGVVPEEALEIYSQISETCKHLKLKGLMCIGAHTDDEKEIEKSF 178
LN L+Q+N + EESKSG+ PEE L + I E HL L+GLM I A TD+ E E +F
Sbjct: 120 PLNVLIQINISDEESKSGIQPEEMLTLAKHI-ENLPHLCLRGLMAIPAPTDNIAEQENAF 178
Query: 179 ITTKKLFDQIKNA------SVLSMGMSDDFELAIACGANLLRIGSFLF 220
+LF+Q+K LSMGM+DD AI CG+ ++RIG+ +F
Sbjct: 179 RKMLELFEQLKQVLPNQQIDTLSMGMTDDMPSAIKCGSTMVRIGTAIF 226
>ref|NP_348739.1| (NC_003030) Predicted enzyme with a TIM-barrel fold [Clostridium
acetobutylicum]
gb|AAK80079.1|AE007713_4 (AE007713) Predicted enzyme with a TIM-barrel fold [Clostridium
acetobutylicum]
Length = 221
Score = 128 bits (322), Expect = 4e-29
Identities = 81/200 (40%), Positives = 116/200 (57%), Gaps = 11/200 (5%)
Query: 28 VKIVAVSKNASPEAIQHYYNCSQRAFGENKVQDLKTKMHSLEHLPLEWHMIGSLQENKIN 87
V +VAVSK E I+ Y R FGENKVQ+L +K + + WH+IG LQ NK+
Sbjct: 18 VTLVAVSKTKPIEDIKEAYEQGIRDFGENKVQELMSKYDEMNS-DVRWHLIGHLQVNKVK 76
Query: 88 ALLSLKPALLHSLDSLKLALKIEKRCEILGVNLNALLQVNSAYEESKSGVVPEEALEIYS 147
++ K L+HSLDS+KL +IEKR G+ + L+ VN EESK+G++ EE LE
Sbjct: 77 YIVG-KVFLIHSLDSIKLLKEIEKRYTNEGLKADVLIYVNIGREESKTGIL-EENLEALL 134
Query: 148 QISETCKHLKLKGLMCIGAHTDDEKEIEKSFITTKKLFDQIKNASV-------LSMGMSD 200
+ C + +KGLM + DD F K +FD +K+ ++ LSMGM+
Sbjct: 135 DECQKCNSVNVKGLMAVIPVGDDNSN-RHYFRKMKAIFDDLKHKNIKNVDMKYLSMGMTH 193
Query: 201 DFELAIACGANLLRIGSFLF 220
D+E+AIA GAN++R+G +F
Sbjct: 194 DYEIAIAEGANIVRVGEGIF 213
>ref|NP_562770.1| (NC_003366) conserved hypothetical protein [Clostridium
perfringens]
dbj|BAB81560.1| (AP003192) conserved hypothetical protein [Clostridium perfringens]
Length = 219
Score = 122 bits (307), Expect = 2e-27
Identities = 79/200 (39%), Positives = 113/200 (56%), Gaps = 11/200 (5%)
Query: 28 VKIVAVSKNASPEAIQHYYNCSQRAFGENKVQDLKTKMHSLEHLPLEWHMIGSLQENKIN 87
V+++AVSK + E ++ Y R FGENKVQ++ K H +EWH+IG LQ NK+
Sbjct: 18 VQLIAVSKTRTIEEMEEAYEFGIRKFGENKVQEIIRKFDEF-HQDVEWHLIGHLQTNKVK 76
Query: 88 ALLSLKPALLHSLDSLKLALKIEKRCEILGVNLNALLQVNSAYEESKSGVVPEEALEIYS 147
++ K L+ SLDS+KL +IEK N L+QVN EE K G++ EE E+
Sbjct: 77 YIVD-KVHLIQSLDSIKLLKEIEKVYGKHNKIANTLIQVNIGREEQKYGILEEELDELIE 135
Query: 148 QISETCKHLKLKGLMCIGAHTDDEKEIEKSFITTKKLFDQIKNAS-------VLSMGMSD 200
I E C ++ + G+M I E+E K F T KLF ++K +LSMGMS
Sbjct: 136 AI-EACNNVNVLGIMTI-IPKGTEEECRKYFSKTHKLFCELKEKKFKNIKMDILSMGMSG 193
Query: 201 DFELAIACGANLLRIGSFLF 220
D+E+A G+N++RIG +F
Sbjct: 194 DYEIATEEGSNMVRIGQGIF 213
>ref|NP_389421.1| (NC_000964) similar to hypothetical proteins [Bacillus subtilis]
sp|O31727|YLME_BACSU Hypothetical protein ylmE
pir||E69876 conserved hypothetical protein ylmE - Bacillus subtilis
emb|CAB13412.1| (Z99112) similar to hypothetical proteins [Bacillus subtilis]
Length = 230
Score = 118 bits (295), Expect = 5e-26
Identities = 75/199 (37%), Positives = 113/199 (56%), Gaps = 13/199 (6%)
Query: 28 VKIVAVSKNASPEAIQHYYNCSQRAFGENKVQDLKTKMHSLEHLPLEWHMIGSLQENKIN 87
V ++AV+K SPE Q + GEN+ +L K ++ P EWH IGSLQ K
Sbjct: 28 VTVIAVTKYVSPERAQEAVDAGITCLGENRDAELLRKQELMKGNP-EWHFIGSLQSRKAK 86
Query: 88 ALLSLKPALLHSLDSLKLALKIEKRCEILGVNLNALLQVNSAYEESKSGVVPEEALEIYS 147
++++ + +HSLD L LA +IEKR E + +QVN++ E SK G+ EE +
Sbjct: 87 SVVN-SVSYIHSLDRLSLAKEIEKRAE---GTVRCFVQVNTSLEPSKHGMKKEEVIPFIQ 142
Query: 148 QISETCKHLKLKGLMCIGAHTDDEKEIEKSFITTKKLFDQIKN-------ASVLSMGMSD 200
++S +H+ + GLM + TDD+ +I F + ++L DQ++ + LSMGMS+
Sbjct: 143 ELSGF-EHILVAGLMTMAPLTDDQDQIRSCFRSLRELRDQVQKLNQPNAPCTELSMGMSN 201
Query: 201 DFELAIACGANLLRIGSFL 219
DFE+AI GA +RIGS L
Sbjct: 202 DFEIAIEEGATYIRIGSSL 220
>ref|NP_623200.1| (NC_003869) predicted enzyme with a TIM-barrel fold
[Thermoanaerobacter tengcongensis]
gb|AAM24804.1| (AE013115) predicted enzyme with a TIM-barrel fold
[Thermoanaerobacter tengcongensis]
Length = 197
Score = 117 bits (294), Expect = 7e-26
Identities = 73/199 (36%), Positives = 119/199 (59%), Gaps = 11/199 (5%)
Query: 31 VAVSKNASPEAIQHYYNCSQRAFGENKVQDLKTKMHSLEHLPLEWHMIGSLQENKINALL 90
+A +K +AI+ +C A GEN+VQ+L K L+ +++H IG LQ NK+ ++
Sbjct: 1 MAATKTFGVDAIKEAISCGITAIGENRVQELMEKYPHLKG-QVDFHFIGHLQTNKVKYII 59
Query: 91 SLKPALLHSLDSLKLALKIEKRCEILGVNLNALLQVNSAYEESKSGVVPEEALEIYSQIS 150
K L+HSLD KLA +I+KR + G+ ++ L++VN E++K G+ PEE + ++
Sbjct: 60 D-KVKLVHSLDREKLAEEIDKRAKQKGIIMDCLIEVNIGGEDTKFGISPEEMHNLVKKL- 117
Query: 151 ETCKHLKLKGLMCIGAHTDDEKEIEKSFITTKKLFDQIK-------NASVLSMGMSDDFE 203
E ++K+KGLM I + E E+ F ++LF+ +K A LSMGMS+D+
Sbjct: 118 EKYDNIKIKGLMTIAPYLPPE-EVRPYFKRMRELFEDLKRINQRNVEAQYLSMGMSNDYW 176
Query: 204 LAIACGANLLRIGSFLFKE 222
+A+ GAN++RIG+ +F E
Sbjct: 177 VAVEEGANIVRIGTAIFGE 195
>ref|NP_229529.1| (NC_000853) conserved hypothetical protein [Thermotoga maritima]
pir||B72217 conserved hypothetical protein - Thermotoga maritima (strain MSB8)
gb|AAD36796.1|AE001812_6 (AE001812) conserved hypothetical protein [Thermotoga maritima]
Length = 229
Score = 117 bits (292), Expect = 1e-25
Identities = 75/225 (33%), Positives = 130/225 (57%), Gaps = 10/225 (4%)
Query: 5 RQKIDALITKIEKARTAYSRHHI-VKIVAVSKNASPEAIQHYYNCSQRAFGENKVQDLKT 63
++ ++ ++ +++ A +R V++V SK AS + ++ R FGEN+ QDL
Sbjct: 4 KENLERVLNRMKNAALRANRDPSEVRLVVASKYASVQQMEELVFLGIREFGENRAQDLVK 63
Query: 64 KMHSLEHLPLEWHMIGSLQENKINALLSLKPALLHSLDSLKLALKIEKRCEILGVNLNAL 123
K + P+ WH IG +Q NK+ ++ + L+HS+ + +IEKR E LG L
Sbjct: 64 KSEYFKGKPIIWHFIGRIQTNKVKYIVP-RCELIHSVWREEELKEIEKRAEKLGKIQKIL 122
Query: 124 LQVNSAYEESKSGVVPEEALEIYSQISETCKHLKLKGLMCIGAHTDDEKEIEKSFITTKK 183
L+VN EE+K+G++ EE +E + ++ + H+++ G M + + D +E+ F T ++
Sbjct: 123 LEVNVFKEETKAGLLVEE-VEGFLKLCQEFPHVEVLGFMTMAPYVGDPEEVRWGFRTLRE 181
Query: 184 LFDQIK---NASV----LSMGMSDDFELAIACGANLLRIGSFLFK 221
L D++ N +V LSMGMS+DFE+AI GA ++RIGS +F+
Sbjct: 182 LRDELASRFNGNVKLKELSMGMSNDFEVAIEEGATMVRIGSAIFE 226
>ref|NP_283062.1| (NC_003116) hypothetical protein NMA0217 [Neisseria meningitidis
Z2491]
pir||B82016 hypothetical protein NMA0217 [imported] - Neisseria meningitidis
(group A strain Z2491)
emb|CAB83529.1| (AL162752) hypothetical protein NMA0217 [Neisseria meningitidis
Z2491]
Length = 228
Score = 115 bits (289), Expect = 3e-25
Identities = 70/200 (35%), Positives = 109/200 (54%), Gaps = 7/200 (3%)
Query: 26 HIVKIVAVSKNASPEAIQHYYNCSQRAFGENKVQDLKTKMHSLEHLP-LEWHMIGSLQEN 84
H V ++AV K + I+ Y QR FGEN +Q+ K L L + WH+IG +Q N
Sbjct: 27 HSVSLIAVGKTFPSDGIREVYAAGQRDFGENYIQEWYDKTEELADLTDIVWHVIGDVQSN 86
Query: 85 KINALLSLKPALLHSLDSLKLALKIEKRCEILGVNLNALLQVNSAYEESKSGVVPEEALE 144
K ++ + +H++ LK A+++ ++ L ++VN A E K GV PEEA+
Sbjct: 87 KTK-FVAERAHWVHTICRLKTAVRLSRQRPSSMPPLQVCIEVNIAGEAVKHGVAPEEAVA 145
Query: 145 IYSQISETCKHLKLKGLMCIGAHTDDEKEIEKSFITTKKLFDQIKNASV----LSMGMSD 200
+ ++++ ++ ++GLMC+ E E++ F T +KL + A V LSMGMSD
Sbjct: 146 LAVEVAKL-PNIVVRGLMCVAKANSSETELKVQFQTMRKLLADLNTAGVKADVLSMGMSD 204
Query: 201 DFELAIACGANLLRIGSFLF 220
D AI CGA +RIGS +F
Sbjct: 205 DMPAAIECGATHVRIGSAIF 224
>ref|NP_603458.1| (NC_003454) Proline synthetase associated protein [Fusobacterium
nucleatum subsp. nucleatum ATCC 25586]
gb|AAL94757.1| (AE010567) Proline synthetase associated protein [Fusobacterium
nucleatum subsp. nucleatum ATCC 25586]
Length = 223
Score = 115 bits (288), Expect = 4e-25
Identities = 71/202 (35%), Positives = 119/202 (58%), Gaps = 10/202 (4%)
Query: 28 VKIVAVSKNASPEAIQHYYNCSQRAFGENKVQDLKTKMHSL--EHLPLEWHMIGSLQENK 85
VK+VAV+K +S E I+ + Q GENKVQ +K K+ ++ ++WH IG+LQ+NK
Sbjct: 24 VKLVAVTKYSSVEDIEKFLETGQNICGENKVQVIKDKIEYFKEKNKKIKWHFIGNLQKNK 83
Query: 86 INALLSLKPALLHSLDSLKLALKIEKRCEILGVNLNALLQVNSAYEESKSGVVPEEALEI 145
+ ++ L+HS++ L LA +I K+ E ++ LL++N EESK G +E L+
Sbjct: 84 VKYIID-DVDLIHSVNKLSLAQEINKKAEQSSKIMDVLLEINVYGEESKQGYSLDE-LKC 141
Query: 146 YSQISETCKHLKLKGLMCIGAHTDDEKEIEKSFITTKKLFDQI------KNASVLSMGMS 199
+ K+L + G+M + TDDEK + F +K+ D++ N + LSMGMS
Sbjct: 142 DIIELQNLKNLNIIGVMTMAPFTDDEKILRMVFSELRKIKDELNKEYFNNNLTELSMGMS 201
Query: 200 DDFELAIACGANLLRIGSFLFK 221
+D+++A+ G+ +R+G+ +FK
Sbjct: 202 NDYKIALQEGSTFIRVGTKIFK 223
>ref|NP_593877.1| (NC_003424) conserved hypothetical UPF0001 family protein
[Schizosaccharomyces pombe]
emb|CAB90136.1| (AL355012) conserved hypothetical UPF0001 family protein
[Schizosaccharomyces pombe]
Length = 237
Score = 114 bits (286), Expect = 6e-25
Identities = 73/199 (36%), Positives = 114/199 (56%), Gaps = 8/199 (4%)
Query: 28 VKIVAVSKNASPEAIQHYYNCSQRAFGENKVQDLKTKMHSLEHLPLEWHMIGSLQENKIN 87
V +VAVSK E + YN QR FGEN +Q+ K+ + ++WH IGSLQ +K
Sbjct: 24 VLLVAVSKFHPVETLMEAYNAGQRHFGENYMQEFLKKVELMPD-DVQWHFIGSLQSSKCK 82
Query: 88 ALLSLKPAL-LHSLDSLKLALKIEKRCEILGVNLNALLQVNSAYEESKSGVVPEEALEIY 146
+ S+K + ++D+ K A + E L + LN +QVN++ EE+K GV P + LE+
Sbjct: 83 KIASVKNLYSIETIDTEKKARLVNSAREALQLPLNVYIQVNTSGEENKGGVTPSKVLELC 142
Query: 147 SQISETCKHLKLKGLMCIGAHTDDE-KEIEKSFITTKKLFDQIKN----ASVLSMGMSDD 201
Q+ + K+L+LKGLM IG+ ++ + + F L + ++N LSMGMS D
Sbjct: 143 KQVQD-MKYLRLKGLMTIGSISNSQLSDHNPDFQVLSDLRESLQNELGIPLQLSMGMSSD 201
Query: 202 FELAIACGANLLRIGSFLF 220
+ LAI G++ +R+GS +F
Sbjct: 202 YLLAIKYGSDSVRVGSSIF 220
>ref|NP_484530.1| (NC_003272) hypothetical protein [Nostoc sp. PCC 7120]
dbj|BAB72444.1| (AP003582) ORF_ID:alr0486~hypothetical protein [Nostoc sp. PCC
7120]
Length = 222
Score = 114 bits (286), Expect = 6e-25
Identities = 75/201 (37%), Positives = 111/201 (54%), Gaps = 10/201 (4%)
Query: 28 VKIVAVSKNASPEAIQHYYNCSQRAFGENKVQDLKTKMHSLEHLP-LEWHMIGSLQENKI 86
V+++AV+K E I+ Y R FGEN++Q+ +K L LP + WH IG LQ NK
Sbjct: 20 VRLIAVTKQMPTEVIRAAYAAGIRDFGENRIQEAASKKAQLHDLPDITWHFIGHLQANKA 79
Query: 87 NALLSLKPALLHSLDSLKLALKIEKRCEILGVNLNALLQVNSAYEESKSGVVPEEALEIY 146
L + +HS+D+LKLA ++++ + LGVN LQV + +KSG E L
Sbjct: 80 KKALE-QFQWIHSVDNLKLAQRLDQLAQQLGVNPQVCLQVKILPDPNKSGWTVPELLTDL 138
Query: 147 SQISETCKHLKLKGLMCIGAHTDDEKEIEKSFITTKKLFDQIKNAS-------VLSMGMS 199
++ CK L+++GLM I ++ EI F TT KL I + LSMGMS
Sbjct: 139 PALNH-CKTLQIQGLMTIPPFGLNDAEIFYVFNTTYKLAKDIAEQNWDHIHMGQLSMGMS 197
Query: 200 DDFELAIACGANLLRIGSFLF 220
D++LA+ GA ++R+G+ LF
Sbjct: 198 GDYQLAVQAGATMVRLGTILF 218
>gb|AAC17617.1| (AC002131) Similar to hypothetical protein F09E5.8 gb|U37429 from
C. elegans. ESTs gb|T42019 and gb|N97000 come from this
gene. [Arabidopsis thaliana]
Length = 255
Score = 114 bits (285), Expect = 8e-25
Identities = 76/202 (37%), Positives = 109/202 (53%), Gaps = 11/202 (5%)
Query: 28 VKIVAVSKNASPEAIQHYYNCSQRAFGENKVQDLKTKMHSLEHLPLEWHMIGSLQENKIN 87
+++VAVSK I+ Y+ QR+FGEN VQ++ K L +EWH IG+LQ NK+
Sbjct: 48 IRVVAVSKTKPVSLIRQVYDAGQRSFGENYVQEIIEKAPQLPE-DIEWHFIGNLQSNKVK 106
Query: 88 ALLSLKPALL--HSLDSLKLALKIEKRCEILGVN-LNALLQVNSAYEESKSGVVPEEALE 144
LLS P L+ S+D K+A +++ +G L +QVN++ E+SK GV P +
Sbjct: 107 PLLSGVPNLVTVESVDDEKIANMLDRVVGNIGRKPLKVFVQVNTSGEDSKFGVEPSGCVG 166
Query: 145 IYSQISETCKHLKLKGLMCIGAHTDDEKEIEKSFITTKKLFDQIKNASV------LSMGM 198
+ + E C +L+ GLM IG D E + K + K + LSMGM
Sbjct: 167 LAKHVKEACSNLEFSGLMTIGM-ADYTSTPENFKLLAKCRSEVCKELGIPEEQCELSMGM 225
Query: 199 SDDFELAIACGANLLRIGSFLF 220
S DFELAI G+ +RIGS +F
Sbjct: 226 SGDFELAIELGSTNVRIGSTIF 247
>gb|AAF57017.1| (AE003772) CG1983 gene product [Drosophila melanogaster]
Length = 249
Score = 114 bits (285), Expect = 8e-25
Identities = 76/208 (36%), Positives = 114/208 (54%), Gaps = 17/208 (8%)
Query: 30 IVAVSKNASPEAIQHYYNCSQRAFGENKVQDLKTKMHSLEHLP----LEWHMIGSLQENK 85
+VAVSK EA+ Y QR FGEN VQ+L+ K + L + WH IG +Q NK
Sbjct: 35 LVAVSKTKPAEAVIEAYEGGQRDFGENYVQELEEKSRHPDILAKCPDIRWHFIGHMQSNK 94
Query: 86 INALLSLKPA-LLHSLDSLKLALKIE----KRCEILGVNLNALLQVNSAYEESKSGVVPE 140
IN +LS+ ++ ++DS KLA K++ KR L L+Q+N++ E+ KSG+ +
Sbjct: 95 INKILSVPNLHMIQTVDSEKLATKLDAAWSKRQPTPEEPLQVLIQINTSGEDVKSGIEAK 154
Query: 141 EALEIYSQISETCKHLKLKGLMCIGAH-TDDEKEIEKSFITTKKLFDQIKNAS------- 192
+A +Y I KHL L G+M IGA D F++ ++ I A
Sbjct: 155 DAPALYQYIKSNLKHLNLMGIMTIGAFGFDYSNGPNPDFVSLMQVHRSICEAHSLAPDSV 214
Query: 193 VLSMGMSDDFELAIACGANLLRIGSFLF 220
++SMGMS+DF+ AI G+ ++R+GS +F
Sbjct: 215 LVSMGMSNDFDKAIEMGSTVVRVGSSIF 242
>ref|NP_273118.1| (NC_003112) conserved hypothetical protein [Neisseria meningitidis
MC58]
pir||C81243 conserved hypothetical protein NMB0053 [imported] - Neisseria
meningitidis (group B strain MD58)
gb|AAF40522.1| (AE002364) conserved hypothetical protein [Neisseria meningitidis
MC58]
Length = 228
Score = 113 bits (283), Expect = 1e-24
Identities = 70/200 (35%), Positives = 108/200 (54%), Gaps = 7/200 (3%)
Query: 26 HIVKIVAVSKNASPEAIQHYYNCSQRAFGENKVQDLKTKMHSLEHLP-LEWHMIGSLQEN 84
H V ++AV K + I+ Y QR FGEN +Q+ K L L + WH+IG +Q N
Sbjct: 27 HSVSLIAVGKTFPSDGIREVYAAGQRDFGENYIQEWYGKTEELADLTDIVWHVIGDVQSN 86
Query: 85 KINALLSLKPALLHSLDSLKLALKIEKRCEILGVNLNALLQVNSAYEESKSGVVPEEALE 144
K ++ + +H++ LK A+++ + L ++VN A E K GV PEEA+
Sbjct: 87 KTK-FVAERAHWVHTVCRLKTAVRLSGQRPSSMPPLQVCIEVNIAGEAVKHGVAPEEAVA 145
Query: 145 IYSQISETCKHLKLKGLMCIGAHTDDEKEIEKSFITTKKLFDQIK----NASVLSMGMSD 200
+ ++++ ++ ++GLMC+ E E++ F T +KL + A VLSMGMSD
Sbjct: 146 LAVEVAKL-PNIVVRGLMCVAKANSSETELKVQFQTMRKLLADLNAAGVKADVLSMGMSD 204
Query: 201 DFELAIACGANLLRIGSFLF 220
D AI CGA +RIGS +F
Sbjct: 205 DMPAAIECGATHVRIGSAIF 224
>ref|NP_404558.1| (NC_003143) conserved hypothetical protein [Yersinia pestis]
emb|CAC89784.1| (AJ414145) conserved hypothetical protein [Yersinia pestis]
Length = 232
Score = 113 bits (283), Expect = 1e-24
Identities = 80/218 (36%), Positives = 123/218 (55%), Gaps = 19/218 (8%)
Query: 17 KARTAYSRHHI------VKIVAVSKNASPEAIQHYYNCSQRAFGENKVQDLKTKMHS-LE 69
+AR A + H+ V ++AVSK AI+ Q AFGEN VQ+ K+HS ++
Sbjct: 12 RARIATAAHNCGRSPEEVTLLAVSKTKPVAAIEKAIAAGQYAFGENYVQEGVDKIHSFVD 71
Query: 70 HLPLEWHMIGSLQENKINALLSLKPALLHSLDSLKLALKIEKRCEILGVNLNALLQVNSA 129
+ LEWH IG LQ NK + L++ A H++D LK+A ++ + LN L+Q+N +
Sbjct: 72 NKTLEWHFIGPLQSNK-SRLVAENFAWCHTVDRLKIAQRLSAQRPAAMPALNVLIQINIS 130
Query: 130 YEESKSGVVPEEALEIYSQISETCKHLKLKGLMCIGAHTDDEK-------EIEKSFITTK 182
E+SK+G+ E + IS T +L L+GLM I A D + ++ ++F+T K
Sbjct: 131 DEQSKAGISLSELPALADSIS-TLPNLCLRGLMAIPAPEHDYQRQLAVFTQMNQAFLTLK 189
Query: 183 KLFDQIKNASVLSMGMSDDFELAIACGANLLRIGSFLF 220
+ QI LSMGM+DD + AI+ G+ L+RIG+ +F
Sbjct: 190 ARYPQI---DTLSMGMTDDMDAAISAGSTLVRIGTAIF 224
>ref|NP_567760.1| (NM_118820) putative Proline synthetase associated protein
[Arabidopsis thaliana]
Length = 244
Score = 112 bits (281), Expect = 2e-24
Identities = 73/203 (35%), Positives = 107/203 (51%), Gaps = 13/203 (6%)
Query: 28 VKIVAVSKNASPEAIQHYYNCSQRAFGENKVQDLKTKMHSLEHLPLEWHMIGSLQENKIN 87
V+++ VSK I+ Y+ R FGEN VQ++ K L +EWH +G LQ NK
Sbjct: 35 VRVLPVSKTKPVSLIRQIYDAGHRCFGENYVQEIIDKAPQLPE-DIEWHFVGHLQSNKAK 93
Query: 88 ALLSLKP--ALLHSLDSLKLALKIEKRCEILGVN-LNALLQVNSAYEESKSGVVPEEALE 144
LL+ P A++H +D K+A +++ LG + L L+QVN++ E SKSG+ P +E
Sbjct: 94 TLLTGVPNLAMVHGVDGEKVANHLDRAVSNLGRHPLKVLVQVNTSGEVSKSGIEPSSVVE 153
Query: 145 IYSQISETCKHLKLKGLMCIGAHTDDEKEIEKSFITTK-------KLFDQIKNASVLSMG 197
+ + C +L GLM IG D ++F T K ++ LSMG
Sbjct: 154 LARHVKHHCPNLVFSGLMTIG--MPDYTSTPENFRTLSNCRADVCKALGMAEDQFELSMG 211
Query: 198 MSDDFELAIACGANLLRIGSFLF 220
MS DFELAI G+ +R+GS +F
Sbjct: 212 MSGDFELAIEMGSTNVRVGSTIF 234
>ref|NP_662693.1| (NC_002932) conserved hypothetical protein [Chlorobium tepidum TLS]
gb|AAM73035.1| (AE012933) conserved hypothetical protein [Chlorobium tepidum TLS]
Length = 229
Score = 112 bits (281), Expect = 2e-24
Identities = 74/217 (34%), Positives = 117/217 (53%), Gaps = 19/217 (8%)
Query: 16 EKARTAYSRHHIVKIVAVSKNASPEAIQHYYNCSQRAFGENKVQDLKTKMHS--LEHLPL 73
E R A R V ++AVSK S AI+ ++ QR FGE+ VQ+ K+ + L LP+
Sbjct: 17 EACRKAGRREDEVTLIAVSKTKSAAAIREAWDAGQREFGESYVQEFLEKVEAPELSGLPV 76
Query: 74 EWHMIGSLQENKINALLSLKPALLHSLDSLKLALKIEKRCEILGVNLNALLQVNSAYEES 133
WH IG LQ NK+ ++ K ++H +D + A ++ KR + ++ LL+VN + E +
Sbjct: 77 SWHFIGHLQSNKVRQIVD-KVTMVHGIDKVSTAKELSKRAGQHDLTVDYLLEVNVSREST 135
Query: 134 KSGVVPEEALEIYSQISETC---KHLKLKGLMCIGAHTDDEKEIEKSFITTKKLFDQIKN 190
K G P+ L Q +E C +++L+GLM I + E + F ++ D+++
Sbjct: 136 KYGFSPDSVL----QAAEECFALPNVRLRGLMTIASPA--PSEARREFAELRQTLDKLRQ 189
Query: 191 -------ASVLSMGMSDDFELAIACGANLLRIGSFLF 220
+ LSMGMS DFE AI GA ++RIG+ +F
Sbjct: 190 NAPEPSLLTELSMGMSGDFEEAILEGATMIRIGTAIF 226
>gb|AAK52989.1|AF375405_1 (AF375405) AT4g26860/F10M23_200 [Arabidopsis thaliana]
gb|AAL47419.1| (AY066052) AT4g26860/F10M23_200 [Arabidopsis thaliana]
gb|AAM61322.1| (AY084753) putative proline synthetase associated protein
[Arabidopsis thaliana]
Length = 244
Score = 112 bits (281), Expect = 2e-24
Identities = 73/203 (35%), Positives = 107/203 (51%), Gaps = 13/203 (6%)
Query: 28 VKIVAVSKNASPEAIQHYYNCSQRAFGENKVQDLKTKMHSLEHLPLEWHMIGSLQENKIN 87
V+++ VSK I+ Y+ R FGEN VQ++ K L +EWH +G LQ NK
Sbjct: 35 VRVLPVSKTKPVSLIRQIYDAGHRCFGENYVQEIIDKAPQLPE-DIEWHFVGHLQSNKAK 93
Query: 88 ALLSLKP--ALLHSLDSLKLALKIEKRCEILGVN-LNALLQVNSAYEESKSGVVPEEALE 144
LL+ P A++H +D K+A +++ LG + L L+QVN++ E SKSG+ P +E
Sbjct: 94 TLLTGVPNLAMVHGVDGEKVANHLDRAVSNLGRHPLKVLVQVNTSGEVSKSGIEPSSVVE 153
Query: 145 IYSQISETCKHLKLKGLMCIGAHTDDEKEIEKSFITTK-------KLFDQIKNASVLSMG 197
+ + C +L GLM IG D ++F T K ++ LSMG
Sbjct: 154 LARHVKHHCPNLVFSGLMTIG--MPDYTSTPENFRTLSNCRADVCKALGMAEDQFELSMG 211
Query: 198 MSDDFELAIACGANLLRIGSFLF 220
MS DFELAI G+ +R+GS +F
Sbjct: 212 MSGDFELAIEMGSTNVRVGSTIF 234
>gb|EAA00912.1| (AAAB01008987) agCP11992 [Anopheles gambiae str. PEST]
Length = 282
Score = 112 bits (280), Expect = 3e-24
Identities = 82/242 (33%), Positives = 127/242 (51%), Gaps = 23/242 (9%)
Query: 2 LDYRQKIDALITKIEKA---RTAYSRHHIVKIVAVSKNASPEAIQHYYNCSQRAFGENKV 58
+D + I + KIE+ R A S ++AVSK + I + Y+ QR FGEN V
Sbjct: 31 VDVKLGIRQTLQKIEETYNKRLALSNAPKPLLIAVSKTKPVDLILNAYSVGQRDFGENYV 90
Query: 59 QDLKTKMHS---LEHLP-LEWHMIGSLQENKINALLSLKPA-LLHSLDSLKLALKIEKRC 113
Q+L K + LEH + WH IG LQ NKIN +++L ++ ++ S+KLA + K
Sbjct: 91 QELVEKANDARILEHCQDIRWHFIGHLQSNKINKVINLPNLHMIQTVHSIKLAEGLNKAW 150
Query: 114 EILGVN-------LNALLQVNSAYEESKSGVVPEEALEIYSQISETCKHLKLKGLMCIGA 166
E + LN L+Q+N++ E+ K+GV PE+A+ ++ + + C +L +G+M IG
Sbjct: 151 EKVKAENAEKKQQLNVLVQINTSGEDEKNGVQPEDAVGLFRYVLDKCPNLNCEGVMTIGR 210
Query: 167 HTDD-EKEIEKSFITTKK-------LFDQIKNASVLSMGMSDDFELAIACGANLLRIGSF 218
D F T K F++ +SMGMSDDF AI G+ ++R+GS
Sbjct: 211 FGHDYTTGPNPDFGTLMKCQQDICSTFERDPAELQVSMGMSDDFVQAIEAGSTIVRVGSS 270
Query: 219 LF 220
+F
Sbjct: 271 IF 272
>ref|NP_643234.1| (NC_003919) conserved hypothetical protein [Xanthomonas axonopodis
pv. citri str. 306]
gb|AAM37770.1| (AE011934) conserved hypothetical protein [Xanthomonas axonopodis
pv. citri str. 306]
Length = 230
Score = 112 bits (279), Expect = 4e-24
Identities = 78/217 (35%), Positives = 115/217 (52%), Gaps = 7/217 (3%)
Query: 8 IDALITKIEKARTAYSRHHIVKIVAVSKNASPEAIQHYYNCSQRAFGENKVQDLKTKMHS 67
+ ++ I A A++R V+++AVSK +A+ QRAFGEN VQ+ K+
Sbjct: 6 LQQILDAIHAAAAAHARAD-VRLLAVSKTKPADAVAALAAQGQRAFGENYVQEADAKIAQ 64
Query: 68 LEHLPLEWHMIGSLQENKINALLSLKPALLHSLDSLKLALKIEKRCEILGVNLNALLQVN 127
L L LEWH+IG LQ NK L S + ++D KL + + LN L+QVN
Sbjct: 65 LRALDLEWHLIGHLQSNKAE-LASQCFDWVQTVDRAKLIPLLARHRPDDRAPLNVLIQVN 123
Query: 128 SAYEESKSGVVPEEALEIYSQISETCKHLKLKGLMCIGAHTDDEKEIEKSFITTKKLFDQ 187
E+SK G P +A++ ++ L+L+GLM I A D+ + +F + LF Q
Sbjct: 124 IDDEDSKHGCAP-DAIDSLAEAIALQPRLQLRGLMAIPAPFPDQARRQAAFSRMQALFRQ 182
Query: 188 I----KNASVLSMGMSDDFELAIACGANLLRIGSFLF 220
+ + LSMGMS DF AIA GA ++R+G+ LF
Sbjct: 183 LQARHRQVDTLSMGMSSDFAEAIAAGATMVRVGTALF 219
>ref|NP_230115.1| (NC_002505) conserved hypothetical protein [Vibrio cholerae]
sp|Q9KUQ4|Y461_VIBCH Hypothetical protein VC0461
pir||E82321 conserved hypothetical protein VC0461 [imported] - Vibrio cholerae
(group O1 strain N16961)
gb|AAF93634.1| (AE004132) conserved hypothetical protein [Vibrio cholerae]
Length = 236
Score = 109 bits (273), Expect = 2e-23
Identities = 81/231 (35%), Positives = 122/231 (52%), Gaps = 11/231 (4%)
Query: 1 MLDYRQKIDALITKIEKARTAYSR-HHIVKIVAVSKNASPEAIQHYYNCSQRAFGENKVQ 59
M +Q I+ + +IE A+ R V+++AVSK EAI QR FGEN VQ
Sbjct: 1 MRSIQQNIEHITAQIESAQQKCGRARSSVQLLAVSKTKPVEAILEATQAGQRYFGENYVQ 60
Query: 60 DLKTKM-HSLEHLP---LEWHMIGSLQENKINALLSLKPALLHSLDSLKLALKIEKRCEI 115
+ K+ + EH P LEWH IG LQ NK L++ +H++D K+AL++ ++ +
Sbjct: 61 EGVDKIRYFAEHHPQLALEWHFIGPLQSNKTR-LVAEHFDWVHTIDREKIALRLSEQRPV 119
Query: 116 LGVNLNALLQVNSAYEESKSGVVPEEALEIYSQISETCKHLKLKGLMCIGAHTDDEKEIE 175
L L+QVN++ E SKSG+ P++ + IS +L L+GLM I + D
Sbjct: 120 NMPPLQVLIQVNTSGEASKSGIEPQQLFTLAELISR-LPNLTLRGLMSIPENVPDYPAQL 178
Query: 176 KSFITTKKLFDQI----KNASVLSMGMSDDFELAIACGANLLRIGSFLFKE 222
+F +L Q+ LSMGMS D + AI G+ ++RIG+ +F E
Sbjct: 179 AAFTQLAELQQQLAQKYPQIDTLSMGMSGDMQAAIEAGSTIVRIGTAIFGE 229
>pir||T46722 conserved hypothetical protein [imported] - Leishmania major
emb|CAB58387.1| (AL121861) possible proline synthetase associated protein
[Leishmania major]
Length = 389
Score = 109 bits (273), Expect = 2e-23
Identities = 77/203 (37%), Positives = 109/203 (52%), Gaps = 11/203 (5%)
Query: 28 VKIVAVSKNASPEAIQHYYNCSQRAFGENKVQDLKTKMHSLEHLPLEWHMIGSLQENKIN 87
V ++AVSK SP + + YN QR FGEN VQ+L K L WH IG LQ NK+
Sbjct: 179 VTLIAVSKTKSPACLLNLYNLGQRVFGENYVQELGEKAKELPE-DTVWHFIGHLQSNKVK 237
Query: 88 ALLSLKPAL--LHSLDSLKLALKIEKRCEIL--GVNLNALLQVNSAYEESKSGVVPEEA- 142
LL P L + ++DS LA K+ + C G L +QVN++ EE+KSG P EA
Sbjct: 238 ELLEGVPNLRVVQTIDSENLASKVNEGCRKYRGGRPLEVYIQVNTSGEETKSGTEPGEAT 297
Query: 143 LEIYSQISETCKHLKLKGLMCIGA--HTDDEKEIEKSFITTKKLFDQIKNAS---VLSMG 197
+ + I++ C L+LKGLM IG +T + E + + ++ A LSMG
Sbjct: 298 VTLAKYIADECPLLQLKGLMTIGMPDYTSRPENFECLTKCREDVAQPVQMAPEDLELSMG 357
Query: 198 MSDDFELAIACGANLLRIGSFLF 220
MS D+ AI G+ +R+G+ +F
Sbjct: 358 MSGDYVNAIRMGSTAVRVGTSIF 380
>ref|NP_563897.1| (NM_101065) putative Proline synthetase associated protein
[Arabidopsis thaliana]
gb|AAL16123.1|AF428291_1 (AF428291) At1g11930/F12F1_20 [Arabidopsis thaliana]
gb|AAM51596.1| (AY116962) At1g11930/F12F1_20 [Arabidopsis thaliana]
Length = 257
Score = 109 bits (272), Expect = 3e-23
Identities = 76/204 (37%), Positives = 109/204 (53%), Gaps = 13/204 (6%)
Query: 28 VKIVAVSKNASPEAIQHYYNCSQRAFGENKVQDLKTKMHSLEHLPLEWHMIGSLQENKIN 87
+++VAVSK I+ Y+ QR+FGEN VQ++ K L +EWH IG+LQ NK+
Sbjct: 48 IRVVAVSKTKPVSLIRQVYDAGQRSFGENYVQEIIEKAPQLPE-DIEWHFIGNLQSNKVK 106
Query: 88 ALLSLKPALL--HSLDSLKLALKIEKRCEILGVN-LNALLQVNSAYEESKSGVVPEEALE 144
LLS P L+ S+D K+A +++ +G L +QVN++ E+SK GV P +
Sbjct: 107 PLLSGVPNLVTVESVDDEKIANMLDRVVGNIGRKPLKVFVQVNTSGEDSKFGVEPSGCVG 166
Query: 145 IYSQISETCKHLKLKGLMCIGAHTDDEKEIEKSFITTKKLFDQIKNASV------LSMGM 198
+ + E C +L+ GLM IG D E + K + K + LSMGM
Sbjct: 167 LAKHVKEACSNLEFSGLMTIGM-ADYTSTPENFKLLAKCRSEVCKELGIPEEQCELSMGM 225
Query: 199 SDDFELA--IACGANLLRIGSFLF 220
S DFELA I G+ +RIGS +F
Sbjct: 226 SGDFELALQIELGSTNVRIGSTIF 249
>sp|P52055|YPI1_VIBAL HYPOTHETICAL PROTEIN IN PILT-PROC INTERGENIC REGION (ORF1)
dbj|BAA09062.1| (D50472) FkuA [Vibrio alginolyticus]
Length = 233
Score = 109 bits (272), Expect = 3e-23
Identities = 76/201 (37%), Positives = 109/201 (53%), Gaps = 10/201 (4%)
Query: 28 VKIVAVSKNASPEAIQHYYNCSQRAFGENKVQDLKTKM-HSLEHLP---LEWHMIGSLQE 83
V+++AVSK EAI Y Q AFGEN VQ+ +K+ H EH P +EWH IG +Q
Sbjct: 29 VQLLAVSKTKPVEAILEAYQAGQTAFGENYVQEGVSKVQHFAEHYPDNRIEWHFIGPIQS 88
Query: 84 NKINALLSLKPALLHSLDSLKLALKIEKRCEILGVNLNALLQVNSAYEESKSGVVPEEAL 143
NK + L++ +H++D K+A ++ + L L+QVN++ E SKSGV E
Sbjct: 89 NK-SRLVAEHFDWVHTIDRTKIAQRLNDQRPSELKPLQVLIQVNTSGEASKSGVTEAEVF 147
Query: 144 EIYSQISETCKHLKLKGLMCIGAHTDDEK----EIEKSFITTKKLFDQIKNASVLSMGMS 199
E+ IS +L L+GLM I A+ D + E +K + L Q LSMGMS
Sbjct: 148 ELAELISR-LPNLTLRGLMSIPANVSDYESQLHEFQKLATLKQTLEAQFPEIDTLSMGMS 206
Query: 200 DDFELAIACGANLLRIGSFLF 220
D AI G+ ++RIG+ +F
Sbjct: 207 GDMTAAIEAGSTMVRIGTAIF 227
>ref|NP_299006.1| (NC_002488) conserved hypothetical protein [Xylella fastidiosa
9a5c]
pir||H82646 conserved hypothetical protein XF1717 [imported] - Xylella
fastidiosa (strain 9a5c)
gb|AAF84526.1|AE003995_8 (AE003995) conserved hypothetical protein [Xylella fastidiosa 9a5c]
Length = 266
Score = 109 bits (272), Expect = 3e-23
Identities = 76/227 (33%), Positives = 120/227 (52%), Gaps = 11/227 (4%)
Query: 3 DYRQKIDALITKIEKARTAYSRH-HIVKIVAVSKNASPEAIQHYYNCSQRAFGENKVQDL 61
D R + + ++I A RH V ++ VSK I+ Y R GENK QD
Sbjct: 28 DIRSNLTKVYSRIIAACQRVDRHPSSVTLLPVSKTVDEVHIRLSYEAGCRKLGENKAQDA 87
Query: 62 KTKMHSLEHLP-LEWHMIGSLQENKINALLSLKPALLHSLDSLKLALKIEKRCEILGVNL 120
K ++ L L W +IG LQ NK L++ + +LDSL++A +E+R +I G +L
Sbjct: 88 YHKWEAMSDLTDLHWSVIGHLQTNKAK-LVARFASEFQALDSLRVAEALERRLQIEGRSL 146
Query: 121 NALLQVNSAYEESKSGVVPEEALEIYSQISETCKHLKLKGLMCIGAHTDDEKEIEKSFIT 180
+ L+QVN++ E +K G+ PEE + +S L+++GLM + + D + + F
Sbjct: 147 DVLIQVNTSGETNKYGLPPEEVVRFVQALS-AYPALRVRGLMTLALLSGDTSRVRQCFTQ 205
Query: 181 TKKLFDQIKNAS-------VLSMGMSDDFELAIACGANLLRIGSFLF 220
+ L D+I+ AS LSMGMS D E+AI GA ++R+G ++
Sbjct: 206 LRILRDRIQQASPQGHHITELSMGMSGDLEIAIEEGATVVRVGQAIY 252
>ref|NP_638104.1| (NC_003902) conserved hypothetical protein [Xanthomonas campestris
pv. campestris str. ATCC 33913]
gb|AAM42028.1| (AE012389) conserved hypothetical protein [Xanthomonas campestris
pv. campestris str. ATCC 33913]
Length = 227
Score = 108 bits (270), Expect = 4e-23
Identities = 74/196 (37%), Positives = 107/196 (53%), Gaps = 6/196 (3%)
Query: 29 KIVAVSKNASPEAIQHYYNCSQRAFGENKVQDLKTKMHSLEHLPLEWHMIGSLQENKINA 88
+++AVSK +A+ Q+AFGEN VQ+ TK+ L+ L LEWH+IG LQ NK +
Sbjct: 25 RLLAVSKTQPADAVAGLAAQGQQAFGENYVQEAATKIAQLQALQLEWHLIGHLQSNKAD- 83
Query: 89 LLSLKPALLHSLDSLKLALKIEKRCEILGVNLNALLQVNSAYEESKSGVVPEEALEIYSQ 148
+ S + ++D KL + + LN L+QVN E+SK G P EA+++ +
Sbjct: 84 MASQCFDWVQTVDRAKLIALLARHRPDGRAPLNVLIQVNIDDEDSKHGCAP-EAIDVLAA 142
Query: 149 ISETCKHLKLKGLMCIGAHTDDEKEIEKSFITTKKLF----DQIKNASVLSMGMSDDFEL 204
T L+L+GLM I A + ++F + LF Q A LSMGMS DF
Sbjct: 143 EIATHPPLQLRGLMAIPAPFPEVTRRHQAFARMQALFATLRSQYPQADTLSMGMSADFAD 202
Query: 205 AIACGANLLRIGSFLF 220
AIA GA ++R+G+ LF
Sbjct: 203 AIAAGATMVRVGTALF 218
>ref|NP_249085.1| (NC_002516) conserved hypothetical protein [Pseudomonas aeruginosa]
sp|P24562|Y394_PSEAE Hypothetical protein PA0394
pir||JN0060 hypothetical 24.5K protein (pilT region) - Pseudomonas aeruginosa
pir||A83598 conserved hypothetical protein PA0394 [imported] - Pseudomonas
aeruginosa (strain PAO1)
gb|AAA25959.1| (M55524) ORF 6; putative [Pseudomonas aeruginosa]
gb|AAG03783.1|AE004476_13 (AE004476) conserved hypothetical protein [Pseudomonas aeruginosa]
Length = 230
Score = 108 bits (269), Expect = 6e-23
Identities = 77/217 (35%), Positives = 111/217 (50%), Gaps = 4/217 (1%)
Query: 6 QKIDALITKIEKARTAYSRHHI-VKIVAVSKNASPEAIQHYYNCSQRAFGENKVQDLKTK 64
+ I + +I +A A R V ++AVSK A++ + R FGEN +Q+ K
Sbjct: 6 ENIAKVAARIREAAQAAGRDPATVGLLAVSKTKPAAAVREAHAAGLRDFGENYLQEALGK 65
Query: 65 MHSLEHLPLEWHMIGSLQENKINALLSLKPALLHSLDSLKLALKIEKRCEILGVNLNALL 124
L LPL WH IG +Q NK + +HS+D LK+A ++ ++ LN L
Sbjct: 66 QAELADLPLNWHFIGPIQSNKTRPIAE-HFQWVHSVDRLKIAQRLSEQRPAGLPPLNVCL 124
Query: 125 QVNSAYEESKSGVVPEEALEIYSQISETCKHLKLKGLMCIGAHTDDEKEIEKSFITTKK- 183
QVN + E SKSG PE+ L ++ + +L+L+GLM I T + +F ++
Sbjct: 125 QVNVSGEASKSGCAPED-LPALAEAVKQLPNLRLRGLMAIPEPTAERAAQHAAFARLREL 183
Query: 184 LFDQIKNASVLSMGMSDDFELAIACGANLLRIGSFLF 220
L D LSMGMSDD E AI GA +RIG+ LF
Sbjct: 184 LLDLNLGLDTLSMGMSDDLEAAIGEGATWVRIGTALF 220
>ref|NP_473398.1| (NM_054057) proline synthetase co-transcribed [Mus musculus]
sp|Q9Z2Y8|POSC_MOUSE Proline synthetase co-transcribed bacterial homolog protein
dbj|BAA36843.1| (AB018567) Proline synthetase associated [Mus musculus]
Length = 274
Score = 107 bits (266), Expect = 1e-22
Identities = 69/209 (33%), Positives = 115/209 (55%), Gaps = 15/209 (7%)
Query: 29 KIVAVSKNASPEAIQHYYNCSQRAFGENKVQDLKTKMHSLEHLP----LEWHMIGSLQEN 84
++VAVSK + + Y QR FGEN VQ+L K + + L ++WH IG LQ+
Sbjct: 41 RLVAVSKTKPADMVIEAYGHGQRTFGENYVQELLEKASNPKILSSCPEIKWHFIGHLQKQ 100
Query: 85 KINALLSLKP-ALLHSLDSLKLALKIEKRCEILGVN--LNALLQVNSAYEESKSGVVPEE 141
+N L+++ ++L ++DS+KLA K+ + G L ++Q+N++ E+SK G++P E
Sbjct: 101 NVNKLMAVPNLSMLETVDSVKLADKVNSSWQKKGPTEPLKVMVQINTSGEDSKHGLLPSE 160
Query: 142 ALEIYSQISETCKHLKLKGLMCIGAHTDD-----EKEIEKSFITTKKLFDQI---KNASV 193
+ + I +C L+ GLM IG+ D + ++ ++L +++
Sbjct: 161 TIAVVEHIKASCPSLEFVGLMTIGSFGHDLSQGPNPDFQRLLTLRRELCEKLGIPVEQVE 220
Query: 194 LSMGMSDDFELAIACGANLLRIGSFLFKE 222
LSMGMS DF+ AI G+ +RIGS +F E
Sbjct: 221 LSMGMSMDFQHAIEVGSTNVRIGSTIFGE 249
>ref|NP_495001.1| (NM_062600) F09E5.8.p [Caenorhabditis elegans]
sp|P52057|YU68_CAEEL HYPOTHETICAL 27.2 KD PROTEIN F09E5.8 IN CHROMOSOME II
pir||T15996 hypothetical protein F09E5.8 - Caenorhabditis elegans
gb|AAA79348.1| (U37429) Hypothetical protein F09E5.8 [Caenorhabditis elegans]
Length = 244
Score = 106 bits (265), Expect = 2e-22
Identities = 81/225 (36%), Positives = 122/225 (54%), Gaps = 16/225 (7%)
Query: 11 LITKIEKARTAYSRHHIVKIVAVSKNASPEAIQHYYNCSQRAFGENKVQDLKTKMHSL-- 68
+I + A TA ++VAVSK S + I+ Y+ +QR FGEN VQ+L+ K L
Sbjct: 13 IIEAVADAVTASQATKRCRLVAVSKTKSADLIEACYSQNQRHFGENYVQELEEKSDVLAS 72
Query: 69 EHLPLEWHMIGSLQENKINALLSLKPAL--LHSLDSLKLALKIEKRCEILGVNLN---AL 123
+ L + WH IG +Q NKI + + P L + ++++ K A +K G NL+ L
Sbjct: 73 KCLDIRWHFIGQVQSNKIGKICN-SPGLWCVETVETEKHARIFDKEWSKHGANLSPLRVL 131
Query: 124 LQVNSAYEESKSGVVPEEALEIYSQISETCKHLKLKGLMCIG----AHTDDEK-EIEKSF 178
+QVN++ E++K G+ EA ++ I + C++LK G M IG +H E + EK F
Sbjct: 132 VQVNTSGEDNKGGIEIGEAPKLAEFIRKECQNLKFDGFMTIGSFDNSHASGENPDFEKLF 191
Query: 179 ITTKKLFDQIKNAS---VLSMGMSDDFELAIACGANLLRIGSFLF 220
+ +Q ++ LSMGMSDDF AI GA +R+GS LF
Sbjct: 192 KVRQTWAEQTGESADSVELSMGMSDDFLQAIHQGATSVRVGSKLF 236
>ref|NP_268025.1| (NC_002662) conserved hypothetical protein [Lactococcus lactis
subsp. lactis]
gb|AAK05966.1|AE006416_11 (AE006416) conserved hypothetical protein [Lactococcus lactis
subsp. lactis]
Length = 225
Score = 106 bits (264), Expect = 2e-22
Identities = 70/225 (31%), Positives = 118/225 (52%), Gaps = 13/225 (5%)
Query: 5 RQKIDALITKIEKARTAYS-RHHIVKIVAVSKNASPEAIQHYYNCSQRAFGENKVQDLKT 63
++ + +++ ++ A+ A S + V +VAV+K+ + + EN+ +
Sbjct: 4 KENVKRILSNVDAAKAASSYSNQSVSVVAVTKSVDANLAREVFENGVSHLAENRTELFLE 63
Query: 64 KMHSLEHLPLEWHMIGSLQENKINALLSLKPALLHSLDSLKLALKIEKRCEILGVNLNAL 123
K +L+ L + WH+IG+LQ K+ +++ H+LDSLKLA +I KR E +
Sbjct: 64 KYEALKDLEITWHLIGNLQRRKVKQVINYVD-YFHALDSLKLAQEINKRAE---HTIKCF 119
Query: 124 LQVNSAYEESKSGVVPEEALEIYSQISETCKHLKLKGLMCIGAHTDDEKEIEKSFITTKK 183
+++N + EESK G E +EI + SE +++++ GLM + E E F KK
Sbjct: 120 IELNISGEESKHGFSVNELMEILPEFSE-LENIEIVGLMTMAPFDATESECNDIFGRMKK 178
Query: 184 LFDQIKNASV-------LSMGMSDDFELAIACGANLLRIGSFLFK 221
L +I ++ LSMGMS D+E+AI GA +RIG+ FK
Sbjct: 179 LQVEISEMNLSRIPCTELSMGMSRDYEIAIKNGATFVRIGTEFFK 223
>ref|NP_009129.1| (NM_007198) proline synthetase co-transcribed homolog (bacterial);
proline synthetase co-transcribed (bacterial homolog)
[Homo sapiens]
sp|O94903|POSC_HUMAN Proline synthetase co-transcribed bacterial homolog protein
dbj|BAA36842.1| (AB018566) Proline synthetase associated [Homo sapiens]
emb|CAB66551.1| (AL136616) hypothetical protein [Homo sapiens]
gb|AAH12334.1|AAH12334 (BC012334) Similar to proline synthetase co-transcribed (bacterial
homolog) [Homo sapiens]
Length = 275
Score = 105 bits (263), Expect = 3e-22
Identities = 75/213 (35%), Positives = 114/213 (53%), Gaps = 23/213 (10%)
Query: 29 KIVAVSKNASPEAIQHYYNCSQRAFGENKVQDLKTKMHSLEHLPL----EWHMIGSLQEN 84
++VAVSK + + Y QR FGEN VQ+L K + + L L +WH IG LQ+
Sbjct: 41 RLVAVSKTKPADMVIEAYGHGQRTFGENYVQELLEKASNPKILSLCPEIKWHFIGHLQKQ 100
Query: 85 KINALLSLKPA-LLHSLDSLKLALKIEKRCEILGV--NLNALLQVNSAYEESKSGVVPEE 141
+N L+++ +L ++DS+KLA K+ + G L ++Q+N++ EESK G+ P E
Sbjct: 101 NVNKLMAVPNLFMLETVDSVKLADKVNSSWQRKGSPERLKVMVQINTSGEESKHGLPPSE 160
Query: 142 ALEIYSQISETCKHLKLKGLMCIGAHTDDEKE---------IEKSFITTKKL---FDQIK 189
+ I I+ C +L+ GLM IG+ D + + KKL DQ++
Sbjct: 161 TIAIVEHINAKCPNLEFVGLMTIGSFGHDLSQGPNPDFQLLLSLREELCKKLNIPADQVE 220
Query: 190 NASVLSMGMSDDFELAIACGANLLRIGSFLFKE 222
LSMGMS DF+ A+ G+ +RIGS +F E
Sbjct: 221 ----LSMGMSADFQHAVEVGSTNVRIGSTIFGE 249
>pir||T04809 hypothetical protein F10M23.200 - Arabidopsis thaliana
emb|CAB36532.1| (AL035440) putative Proline synthetase associated protein
[Arabidopsis thaliana]
emb|CAB79541.1| (AL161566) putative Proline synthetase associated protein
[Arabidopsis thaliana]
Length = 262
Score = 105 bits (263), Expect = 3e-22
Identities = 73/219 (33%), Positives = 106/219 (48%), Gaps = 27/219 (12%)
Query: 28 VKIVAVSKNASPEAIQHYYNCSQRAFGENKVQDLKTKMHSLEHLPLEWHMIGSLQENKIN 87
V+++ VSK I+ Y+ R FGEN VQ++ K L +EWH +G LQ NK
Sbjct: 35 VRVLPVSKTKPVSLIRQIYDAGHRCFGENYVQEIIDKAPQLPE-DIEWHFVGHLQSNKAK 93
Query: 88 ALLSLKP--ALLHSLDSLKLALKIEKRCEILGVN-LNALLQVNSAYEESKSGVVPEEALE 144
LL+ P A++H +D K+A +++ LG + L L+QVN++ E SKSG+ P +E
Sbjct: 94 TLLTGVPNLAMVHGVDGEKVANHLDRAVSNLGRHPLKVLVQVNTSGEVSKSGIEPSSVVE 153
Query: 145 IYSQISETCKHLKLKGLMCIGA--HTDDEKEIEKSFITTKKLFDQIKNASV--------- 193
+ + C +L GLM IG +T + + LF S
Sbjct: 154 LARHVKHHCPNLVFSGLMTIGMPDYTSTPENFRVFYYLIGYLFYVFSGYSYKFYLPRADV 213
Query: 194 ------------LSMGMSDDFELAIACGANLLRIGSFLF 220
LSMGMS DFELAI G+ +R+GS +F
Sbjct: 214 CKALGMAEDQFELSMGMSGDFELAIEMGSTNVRVGSTIF 252
>emb|CAC21426.1| (AJ297409) ylmE [Thermus thermophilus]
Length = 211
Score = 104 bits (260), Expect = 6e-22
Identities = 81/212 (38%), Positives = 115/212 (54%), Gaps = 10/212 (4%)
Query: 11 LITKIEKA-RTAYSRHHIVKIVAVSKNASPEAIQHYYNC-SQRAFGENKVQDLKTKMHSL 68
++ +I +A R A R V++VAV+K S E I+ GE++VQ+ KM L
Sbjct: 6 VLERIARACRRAGRRPEEVRLVAVTKGRSVEEIREKVLAYGTFPLGESRVQEALKKMDLL 65
Query: 69 EHLPLEWHMIGSLQENKINALLSLKPALLHSLDSLKLALKIEKRCEILGVNLNALLQVNS 128
EWH++G LQ NK A + + AL+HSLDSL+LA +EK E GV L L++VN
Sbjct: 66 H---AEWHLVGHLQRNK--AKFAPRFALVHSLDSLRLAEALEKVGEKAGVRLKVLVEVNL 120
Query: 129 AYEESKSGVVPEEALEIYSQISETCKHLKLKGLMCIGAHTDDEKEIEKSFITTKKLFDQI 188
E K GV+ EE E+ ++ E HL++ GLM + E + F +L D+
Sbjct: 121 GREPQKHGVLEEELPELLPRLRE-MPHLEVLGLMTV-PPIGPEAVVRPIFRRLSELADRY 178
Query: 189 KNASVLSMGMSDDFELAIACGANLLRIGSFLF 220
SMGMSDD+E A+ GA L+R+G LF
Sbjct: 179 -GLPERSMGMSDDYEWAVEEGATLVRVGRALF 209
>ref|NP_633699.1| (NC_003901) conserved protein [Methanosarcina mazei Goe1]
gb|AAM31371.1| (AE013403) conserved protein [Methanosarcina mazei Goe1]
Length = 225
Score = 103 bits (257), Expect = 1e-21
Identities = 69/198 (34%), Positives = 102/198 (50%), Gaps = 12/198 (6%)
Query: 30 IVAVSKNASPEAIQHYYNCSQRAFGENKVQDLKTKMHSLEHLPLEWHMIGSLQENKINAL 89
+V V+K PE I GEN+VQ+ + K + LP E H+IG LQ NK+
Sbjct: 28 LVCVTKTIEPERINEAIRAGATIIGENRVQEYEDKRDDI--LPCETHLIGHLQANKVKKA 85
Query: 90 LSLKPALLHSLDSLKLALKIEKRCEILGVNLNALLQVNSAYEESKSGVVPEEALEIYSQI 149
+ L ++ S+DSLKL I+ R + LQVN E K G P+E ++I
Sbjct: 86 VHLFD-VIQSIDSLKLIQNIDMRARDIDKVQRVYLQVNIGNEPQKYGFRPDEIKNAITEI 144
Query: 150 SETCKHLKLKGLMCIGAHTDDEKEIEKSFITTKKLFDQIKNAS-------VLSMGMSDDF 202
+ ++++++GLMCI E + F K LFD+IK + LSMGMS D+
Sbjct: 145 -RSLRNVRVEGLMCIPPFVPPE-QTRSYFRKMKALFDEIKQENRDNIDIRTLSMGMSSDY 202
Query: 203 ELAIACGANLLRIGSFLF 220
+AI GA ++R+GS +F
Sbjct: 203 RIAIEEGATMVRVGSSIF 220
>ref|NP_289523.1| (NC_002655) orf, hypothetical protein [Escherichia coli O157:H7
EDL933]
ref|NP_311854.1| (NC_002695) hypothetical protein [Escherichia coli O157:H7]
ref|NP_417426.1| (NC_000913) orf, hypothetical protein [Escherichia coli K12]
sp|P52054|YGGS_ECOLI Hypothetical protein yggS
pir||F65080 hypothetical protein b2951 - Escherichia coli (strain K-12)
gb|AAA69118.1| (U28377) ORF_o234 [Escherichia coli]
gb|AAC75988.1| (AE000378) orf, hypothetical protein [Escherichia coli K12]
gb|AAG58082.1|AE005525_8 (AE005525) orf, hypothetical protein [Escherichia coli O157:H7
EDL933]
dbj|BAB37250.1| (AP002563) hypothetical protein [Escherichia coli O157:H7]
Length = 234
Score = 103 bits (257), Expect = 1e-21
Identities = 79/231 (34%), Positives = 121/231 (52%), Gaps = 16/231 (6%)
Query: 1 MLDYRQKIDALITKIEKARTAYSRH-HIVKIVAVSKNASPEAIQHYYNCSQRAFGENKVQ 59
M D + + KI A T R + ++AVSK AI + QR FGEN VQ
Sbjct: 1 MNDIAHNLAQVRDKISAAATRCGRSPEEITLLAVSKTKPASAIAEAIDAGQRQFGENYVQ 60
Query: 60 DLKTKMHSLEHLP---LEWHMIGSLQENKINALLSLKPALLHSLDSLKLALKIEKRCEIL 116
+ K+ + L LEWH IG LQ NK + L++ H++D L++A ++ +
Sbjct: 61 EGVDKIRHFQELGVTGLEWHFIGPLQSNK-SRLVAEHFDWCHTIDRLRIATRLNDQRPAE 119
Query: 117 GVNLNALLQVNSAYEESKSGVVPEEALEIYSQISETCKHLKLKGLMCIGAHTDDEKEIEK 176
LN L+Q+N + E SKSG+ E E+ + ++E + L+L+GLM I A E E +
Sbjct: 120 LPPLNVLIQINISDENSKSGIQLAELDELAAAVAELPR-LRLRGLMAIPA---PESEYVR 175
Query: 177 SFITTKKL---FDQIK----NASVLSMGMSDDFELAIACGANLLRIGSFLF 220
F +++ F +K + LS+GMSDD E AIA G+ ++RIG+ +F
Sbjct: 176 QFEVARQMAVAFAGLKTRYPHIDTLSLGMSDDMEAAIAAGSTMVRIGTAIF 226
>ref|NP_615457.1| (NC_003552) conserved hypothetical protein [Methanosarcina
acetivorans str. C2A] [Methanosarcina acetivorans C2A]
gb|AAM03937.1| (AE010709) conserved hypothetical protein [Methanosarcina
acetivorans str. C2A] [Methanosarcina acetivorans C2A]
Length = 216
Score = 103 bits (256), Expect = 2e-21
Identities = 67/198 (33%), Positives = 104/198 (51%), Gaps = 12/198 (6%)
Query: 30 IVAVSKNASPEAIQHYYNCSQRAFGENKVQDLKTKMHSLEHLPLEWHMIGSLQENKINAL 89
+V V+K PE I GEN+VQ+ + K + LP E H+IG LQ NK+
Sbjct: 19 LVCVTKTIEPERINEAIRAGAPIIGENRVQEYEDKRDDI--LPCETHLIGHLQTNKVKKA 76
Query: 90 LSLKPALLHSLDSLKLALKIEKRCEILGVNLNALLQVNSAYEESKSGVVPEEALEIYSQI 149
+ L ++ S+DS+K+ I++R +G LQVN E K G P+E ++I
Sbjct: 77 VHLFD-VIQSIDSMKIIRDIDRRARDIGKVQKVYLQVNIGNEPQKYGFGPDEIKNAITEI 135
Query: 150 SETCKHLKLKGLMCIGAHTDDEKEIEKSFITTKKLFDQIKNAS-------VLSMGMSDDF 202
+ ++++++GLMCI E + F K LFD++K + LSMGMS D+
Sbjct: 136 -RSLRNVRVEGLMCIPPFVPPE-QTRPYFKKMKALFDEMKQENRDNIDIRTLSMGMSGDY 193
Query: 203 ELAIACGANLLRIGSFLF 220
+AI GA ++R+GS +F
Sbjct: 194 RIAIEEGATMVRVGSAIF 211
>ref|NP_387436.1| (NC_003047) CONSERVED HYPOTHETICAL PROTEIN [Sinorhizobium meliloti]
emb|CAC47909.1| (AL591793) CONSERVED HYPOTHETICAL PROTEIN [Sinorhizobium meliloti]
Length = 219
Score = 103 bits (256), Expect = 2e-21
Identities = 72/222 (32%), Positives = 119/222 (53%), Gaps = 9/222 (4%)
Query: 2 LDYRQKIDALITKIEKARTAYSR-HHIVKIVAVSKNASPEAIQHYYNCSQRAFGENKVQD 60
++ ++++ ++++I + + +R + V +VAVSK E I+ QR FGEN+VQ+
Sbjct: 1 MEVEERLNEVLSRIRASEKSANRPENTVSLVAVSKTFDAETIRPVIEAGQRVFGENRVQE 60
Query: 61 LKTKMHSL--EHLPLEWHMIGSLQENKINALLSLKPALLHSLDSLKLALKIEKRCEILGV 118
+ K +L E +E H+IG LQ NK ++L ++ ++D K+A + + G
Sbjct: 61 AQAKWPALKRETPDIELHLIGPLQSNKAADAVALFD-VIETIDREKIARAVAAEMKRQGR 119
Query: 119 NLNALLQVNSAYEESKSGVVPEEALEIYSQISETCKHLKLKGLMCIGAHTDDEKEIEKSF 178
++ +QVN+ E K+G+ PE+A + + L ++GLMCI ++ F
Sbjct: 120 DIRLYVQVNTGLEPQKAGIAPEDAAAFVALCRDELA-LNIEGLMCIPPFDENP---GPHF 175
Query: 179 ITTKKLFDQIKNASVLSMGMSDDFELAIACGANLLRIGSFLF 220
KL Q S LSMGMS DFE AIA GA +R+GS +F
Sbjct: 176 ALLAKLAGQC-GLSRLSMGMSGDFETAIAFGATGVRVGSAIF 216
>emb|CAA75617.1| (Y15422) hypothetical protein [Lactococcus lactis subsp. cremoris]
Length = 225
Score = 102 bits (255), Expect = 2e-21
Identities = 69/226 (30%), Positives = 117/226 (51%), Gaps = 13/226 (5%)
Query: 5 RQKIDALITKIEKARTAYS-RHHIVKIVAVSKNASPEAIQHYYNCSQRAFGENKVQDLKT 63
++ + ++ ++ A+ A S + V +VAV+K+ + + EN+ +
Sbjct: 4 KENVKRILNNVDAAKAASSYSNQSVSVVAVTKSVEANLAREVFENGISHLAENRTELFLE 63
Query: 64 KMHSLEHLPLEWHMIGSLQENKINALLSLKPALLHSLDSLKLALKIEKRCEILGVNLNAL 123
K +L+ + WH+IG+LQ K+ +++ H+LDSLKLA +I KR E L +
Sbjct: 64 KYEALKDCEITWHLIGNLQRRKVKKVINYVD-YFHALDSLKLAQEISKRAEHL---IKCF 119
Query: 124 LQVNSAYEESKSGVVPEEALEIYSQISETCKHLKLKGLMCIGAHTDDEKEIEKSFITTKK 183
++VN + EESK G +E E + SE +++++ GLM + E E F K+
Sbjct: 120 IEVNISGEESKHGFSVDELKETLADFSE-LENIEIVGLMTMAPFDATESECNDIFGRMKE 178
Query: 184 LFDQIKNASV-------LSMGMSDDFELAIACGANLLRIGSFLFKE 222
L +I ++ LSMGMS D+E+AI GA +RIG+ FK+
Sbjct: 179 LQVEISEMNLPKIPCIELSMGMSRDYEIAIKNGATFVRIGTEFFKD 224
>ref|NP_355677.1| (NC_003062) AGR_C_4983p [Agrobacterium tumefaciens] [Agrobacterium
tumefaciens str. C58 (Cereon)]
ref|NP_533412.1| (NC_003304) conserved hypothetical protein [Agrobacterium
tumefaciens str. C58 (U. Washington)]
gb|AAK88462.1| (AE008188) AGR_C_4983p [Agrobacterium tumefaciens str. C58
(Cereon)]
gb|AAL43728.1| (AE009222) conserved hypothetical protein [Agrobacterium
tumefaciens str. C58 (U. Washington)]
Length = 220
Score = 102 bits (254), Expect = 3e-21
Identities = 72/195 (36%), Positives = 104/195 (52%), Gaps = 8/195 (4%)
Query: 28 VKIVAVSKNASPEAIQHYYNCSQRAFGENKVQDLKTKMHSLEH--LPLEWHMIGSLQENK 85
V +VAVSK EAIQ + QR FGEN+VQ+ + K +L+ +E H+IG LQ NK
Sbjct: 29 VALVAVSKTFDAEAIQPVIDAGQRVFGENRVQEAQGKWPALKEKTSDIELHLIGPLQSNK 88
Query: 86 INALLSLKPALLHSLDSLKLALKIEKRCEILGVNLNALLQVNSAYEESKSGVVPEEALEI 145
++L ++ S+D K+A + + C G +L +QVN+ E K+G+ P E +
Sbjct: 89 AADAVALFD-VVESIDREKIARALSEECARQGRSLRFYVQVNTGLEPQKAGIDPRETVAF 147
Query: 146 YSQISETCKHLKLKGLMCIGAHTDDEKEIEKSFITTKKLFDQIKNASVLSMGMSDDFELA 205
+ + K L ++GLMCI E+ F KL Q LSMGMS DFE A
Sbjct: 148 VAFCRDELK-LPVEGLMCI---PPAEENPGPHFALLAKLAGQC-GLEKLSMGMSGDFETA 202
Query: 206 IACGANLLRIGSFLF 220
+ GA +R+GS +F
Sbjct: 203 VEFGATSVRVGSAIF 217
>ref|NP_462016.1| (NC_003197) putative enzyme with a TIM-barrel fold [Salmonella
typhimurium LT2]
gb|AAL21975.1| (AE008842) putative enzyme with a TIM-barrel fold [Salmonella
typhimurium LT2]
Length = 234
Score = 99.8 bits (247), Expect = 2e-20
Identities = 79/232 (34%), Positives = 120/232 (51%), Gaps = 18/232 (7%)
Query: 1 MLDYRQKIDALITKIEKARTAYSRH-HIVKIVAVSKNASPEAIQHYYNCSQRAFGENKVQ 59
M D + + KI A T R V ++AVSK I QRAFGEN VQ
Sbjct: 1 MNDIAHNLAYIRDKISAAATRCGRSSEEVTLLAVSKTKPASDIAEAIAAGQRAFGENYVQ 60
Query: 60 DLKTKMHSLEHLPLE---WHMIGSLQENKINALLSLKPALLHSLDSLKLALKI-EKRCEI 115
+ K+ + +E WH IG LQ NK + L++ H++D L++A ++ E+R +
Sbjct: 61 EGVEKIRHFQEAKVEGLHWHFIGPLQSNK-SRLVAEHFDWCHTIDRLRIASRLSEQRPDN 119
Query: 116 LGVNLNALLQVNSAYEESKSGVVPEEALEIYSQISETCKHLKLKGLMCIGAHTDD----- 170
L LN L+Q+N + E SKSG+ E E+ + ++ T L+L+GLM I A D
Sbjct: 120 LPA-LNVLIQINISDENSKSGIPLAELDELAAAVA-TLPRLRLRGLMAIPAPESDYVRQF 177
Query: 171 --EKEIEKSFITTKKLFDQIKNASVLSMGMSDDFELAIACGANLLRIGSFLF 220
+++ +F K + + LS+GMSDD E AIA G+ ++RIG+ +F
Sbjct: 178 EVARQMAVAFAGLKARYPDV---DTLSLGMSDDMEAAIAAGSTMVRIGTAIF 226
>ref|NP_457492.1| (NC_003198) conserved hypothetical protein [Salmonella enterica
subsp. enterica serovar Typhi]
emb|CAD02924.1| (AL627277) conserved hypothetical protein [Salmonella enterica
subsp. enterica serovar Typhi]
Length = 234
Score = 99.8 bits (247), Expect = 2e-20
Identities = 79/232 (34%), Positives = 120/232 (51%), Gaps = 18/232 (7%)
Query: 1 MLDYRQKIDALITKIEKARTAYSRH-HIVKIVAVSKNASPEAIQHYYNCSQRAFGENKVQ 59
M D + + KI A T R V ++AVSK I QRAFGEN VQ
Sbjct: 1 MNDIAHNLAHIRDKISAAATRCGRSSEEVTLLAVSKTKPASDIAEAIAAGQRAFGENYVQ 60
Query: 60 DLKTKMHSLEHLPLE---WHMIGSLQENKINALLSLKPALLHSLDSLKLALKI-EKRCEI 115
+ K+ + +E WH IG LQ NK + L++ H++D L++A ++ E+R +
Sbjct: 61 EGVEKIRHFQEAKVEGLHWHFIGPLQSNK-SRLVAEHFDWCHTIDRLRIASRLSEQRPDN 119
Query: 116 LGVNLNALLQVNSAYEESKSGVVPEEALEIYSQISETCKHLKLKGLMCIGAHTDD----- 170
L LN L+Q+N + E SKSG+ E E+ + ++ T L+L+GLM I A D
Sbjct: 120 LPA-LNVLIQINISDENSKSGIPLAELDELAAAVA-TLPRLRLRGLMAIPAPESDYVRQF 177
Query: 171 --EKEIEKSFITTKKLFDQIKNASVLSMGMSDDFELAIACGANLLRIGSFLF 220
+++ +F K + + LS+GMSDD E AIA G+ ++RIG+ +F
Sbjct: 178 EVARQMAVAFAGLKARYPDV---DTLSLGMSDDMEAAIAAGSTMVRIGTAIF 226
>ref|NP_520804.1| (NC_003295) CONSERVED HYPOTHETICAL PROTEIN [Ralstonia solanacearum]
emb|CAD16390.1| (AL646071) CONSERVED HYPOTHETICAL PROTEIN [Ralstonia solanacearum]
Length = 240
Score = 98.2 bits (243), Expect = 6e-20
Identities = 76/225 (33%), Positives = 114/225 (49%), Gaps = 14/225 (6%)
Query: 8 IDALITKIEKARTAYSRHHI-VKIVAVSKNASPEAIQHYYNCSQRAFGENKVQDLKTKMH 66
+ A+ +I A T SR V ++AVSK +A++ + QR FGEN VQ+ K
Sbjct: 8 LQAVRQRITTACTLASRDPASVTLLAVSKTFDADAVRAAHAAGQRLFGENYVQEGTAKTS 67
Query: 67 SLEHL-----PLEWHMIGSLQENKINALLSLKPALLHSLDSLKLALKIEKRCEILGVNLN 121
+L L + WH IG LQ NK A+ +HS+D LK+A ++ + L
Sbjct: 68 ALTDLRNGPEAIAWHFIGPLQSNKTRAVAEHFD-WVHSIDRLKIAERLSAQRPATLPPLQ 126
Query: 122 ALLQVNSAYEESKSGVVPE--EALEIYSQISETCKHLKLKGLMCIGAHTDDEKEIEKSFI 179
L++N + + SK GV P+ E L + ++ L+L+GLM + DD F
Sbjct: 127 VCLEINISRQASKHGVPPDLDEVLPLARAVA-ALPRLRLRGLMAVPEPADDPAARRAPFA 185
Query: 180 TTKKLFDQIKNASV----LSMGMSDDFELAIACGANLLRIGSFLF 220
+ L D++ A + LSMGMS D E AIA GA ++R+GS +F
Sbjct: 186 ALRDLADRLCAAGLPVDTLSMGMSADLEDAIAEGATIVRVGSAIF 230
>ref|NP_346104.1| (NC_003028) ylmE protein [Streptococcus pneumoniae TIGR4]
gb|AAC95441.1| (AF068901) YlmE [Streptococcus pneumoniae]
gb|AAK75744.1| (AE007459) ylmE protein [Streptococcus pneumoniae TIGR4]
Length = 223
Score = 95.5 bits (236), Expect = 4e-19
Identities = 65/213 (30%), Positives = 109/213 (50%), Gaps = 12/213 (5%)
Query: 16 EKARTAYSRHHIVKIVAVSKNASPEAIQHYYNCSQRAFGENKVQDLKTKMHSLEHLPLEW 75
E + +A+ V ++AV+K + GEN+V K +L+ + W
Sbjct: 16 EASLSAHRESGSVSVIAVTKYVDVPTAEALLPLGVHHIGENRVDKFLEKYEALKDRDVTW 75
Query: 76 HMIGSLQENKINALLSLKPALLHSLDSLKLALKIEKRCEILGVNLNALLQVNSAYEESKS 135
H+IG+LQ K+ ++ H+LDS+KLA +I+KR + + + LQVN + EESK
Sbjct: 76 HLIGTLQRRKVKDVIQYVD-YFHALDSVKLAGEIQKRSDRV---IKCFLQVNISKEESKH 131
Query: 136 GVVPEEALEIYSQISETCKHLKLKGLMCIGAHTDDEKEIEKSFITTKKLFDQIKNASV-- 193
G EE LEI +++ K ++ GLM + +++++ F + L +I+ +
Sbjct: 132 GFSREELLEILPELARLDK-IEYVGLMTMAPFEASSEQLKEIFKAAQDLQREIQEKQIPN 190
Query: 194 -----LSMGMSDDFELAIACGANLLRIGSFLFK 221
LSMGMS D++ AI G+ +RIG+ FK
Sbjct: 191 MPMTELSMGMSRDYKEAIQFGSTFVRIGTSFFK 223
>ref|NP_657870.1| (NC_003995) UPF0001, Uncharacterized protein family UPF0001
[Bacillus anthracis A2012] [Bacillus anthracis str.
A2012]
Length = 224
Score = 95.5 bits (236), Expect = 4e-19
Identities = 65/201 (32%), Positives = 104/201 (51%), Gaps = 17/201 (8%)
Query: 28 VKIVAVSKNASPEAIQHYYNCSQRAFGENKVQDLKTKMHSLEHL--PLEWHMIGSLQENK 85
+K+VAV+K E GEN+ + K EH + WH IGSLQ K
Sbjct: 28 IKLVAVTKTVGIEKTNEVIEAGIIDLGENRNEGFLQKY---EHFGSKVNWHFIGSLQTRK 84
Query: 86 INALLSLKPALLHSLDSLKLALKIEKRCEILGVNLNALLQVNSAYEESKSGVVPEEALEI 145
+ +++ + LHSLD L LA +I+KR + +QV ++ EESK G+ EE +
Sbjct: 85 VKEIIN-EIDYLHSLDRLSLAKEIQKRAN---KKVKCFIQVKTSSEESKQGLAIEETVSF 140
Query: 146 YSQISETCKHLKLKGLMCIGAHTDDEKEIEKSFITTKKLFDQIKNASVL-------SMGM 198
+ E K +++ GLM + T++E+EI + F + L +++ +L SMGM
Sbjct: 141 IQSLQELDK-IEVVGLMTMAPFTEEEEEIRRCFKELRMLQKEVQGLELLHAPCKELSMGM 199
Query: 199 SDDFELAIACGANLLRIGSFL 219
S+D+ +AI GA +R+G+ L
Sbjct: 200 SNDYTIAIEEGATYIRLGTIL 220
>ref|NP_243416.1| (NC_002570) BH2550~unknown conserved protein [Bacillus halodurans]
dbj|BAB06269.1| (AP001515) BH2550~unknown conserved protein [Bacillus halodurans]
Length = 228
Score = 95.1 bits (235), Expect = 5e-19
Identities = 69/199 (34%), Positives = 105/199 (52%), Gaps = 11/199 (5%)
Query: 28 VKIVAVSKNASPEAIQHYYNCSQRAFGENKVQDLKTKMHSLEHLPLEWHMIGSLQENKIN 87
V I+AV+K S + GEN+V+ K + + WH IGSLQ K+
Sbjct: 28 VHIIAVTKYVSEARTREALEAGITHIGENRVEGGVEKRRAFPNEGT-WHFIGSLQSKKVK 86
Query: 88 ALLSLKPALLHSLDSLKLALKIEKRCEILGVNLNALLQVNSAYEESKSGVVPEEALEIYS 147
+++ LHSLD L LA +I++R G LN +QVN + E+SKSG+ PEE L
Sbjct: 87 KMIA-DFDYLHSLDRLSLAKEIDRRLPD-GQALNCFVQVNVSGEQSKSGLKPEEVLPFIE 144
Query: 148 QISETCKHLKLKGLMCIGAHTDDEKEIEKSFITTKKLFDQIKN-------ASVLSMGMSD 200
++ +T +++ GLM + +D ++ F + L D+++ S LSMGMS+
Sbjct: 145 EL-QTYPSIRVVGLMTMAPFVEDPEDTRWVFRELRHLRDEVQAKRFNHAPCSELSMGMSN 203
Query: 201 DFELAIACGANLLRIGSFL 219
DF +AI GA +RIG+ L
Sbjct: 204 DFIVAIEEGATFVRIGTAL 222
>ref|NP_442806.1| (NC_000911) hypothetical protein [Synechocystis sp. PCC 6803]
sp|P52056|Y556_SYNY3 Hypothetical protein slr0556
pir||S76030 hypothetical protein - Synechocystis sp. (strain PCC 6803)
dbj|BAA10877.1| (D64006) ORF_ID:slr0556~hypothetical protein [Synechocystis sp. PCC
6803]
Length = 218
Score = 94.7 bits (234), Expect = 6e-19
Identities = 68/199 (34%), Positives = 105/199 (52%), Gaps = 8/199 (4%)
Query: 28 VKIVAVSKNASPEAIQHYYNCSQRAFGENKVQDLKTKMHSL-EHLPLEWHMIGSLQENKI 86
V++VAV+K + I+ Y R F E+++Q+ K+ +L + + WH IG LQ NK
Sbjct: 18 VRLVAVTKTKAIADIEAAYGAGIRDFAESRIQEALPKIEALANYQDINWHFIGRLQSNKA 77
Query: 87 NALLSLKPALLHSLDSLKLALKIEKRCEILGVNLNALLQVNSAYEESKSGVVPEEALEIY 146
++ +HS+D+L +A+K+++ E L LLQ+ +E+KSG EE
Sbjct: 78 RKVVE-NFTYIHSVDNLAIAVKLDRIAEELNKFPQGLLQIKLLPDENKSGWTREELKLDL 136
Query: 147 SQISETCKHLKLKGLMCIGAHTDDEKEIEKSFITTKKLFDQIKNASVLS-----MGMSDD 201
Q+ E K+LK+ GLM I + + +F K L I S LS MGMS D
Sbjct: 137 PQL-ELLKNLKICGLMTILPLGLSPGDRQLTFGELKNLATAINQQSSLSLTELSMGMSGD 195
Query: 202 FELAIACGANLLRIGSFLF 220
+ AIA GA ++R+G+ LF
Sbjct: 196 YPEAIAAGATMIRLGTILF 214
>ref|NP_009517.1| (NC_001134) Hypothetical ORF; Ybl036cp [Saccharomyces cerevisiae]
sp|P38197|YBD6_YEAST Hypothetical 29.1 kDa protein in URA7-POL12 intergenic region
pir||S50294 hypothetical protein YBL036c - yeast (Saccharomyces cerevisiae)
pdb|1B54| Crystal Structure Of A Yeast Hypothetical Protein - A Structure
From Bnl's Human Proteome Project
emb|CAA55058.1| (X78214) YBL0413 [Saccharomyces cerevisiae]
emb|CAA84856.1| (Z35797) ORF YBL036c [Saccharomyces cerevisiae]
Length = 257
Score = 94.4 bits (233), Expect = 8e-19
Identities = 76/209 (36%), Positives = 112/209 (53%), Gaps = 21/209 (10%)
Query: 28 VKIVAVSKNASPEAIQHYYNCSQRAFGENKVQDLKTKMHSLEHLPLEWHMIGSLQENKIN 87
+ ++ VSK IQ Y+ R FGEN VQ+L K L ++WH IG LQ NK
Sbjct: 42 ILLLVVSKLKPASDIQILYDHGVREFGENYVQELIEKAKLLPD-DIKWHFIGGLQTNKCK 100
Query: 88 ALLSLKPAL--LHSLDSLKLALKIEKRCEILGVNLNALL---QVNSAYEESKSGVVPE-- 140
L + P L + ++DSLK A K+ + + N +L Q+N+++E+ KSG+ E
Sbjct: 101 DLAKV-PNLYSVETIDSLKKAKKLNESRAKFQPDCNPILCNVQINTSHEDQKSGLNNEAE 159
Query: 141 --EALEIYSQISETCKHLKLKGLMCIGAHT---DDEKEIEKSFITT----KKLFDQIKNA 191
E ++ + +SE CK++KL GLM IG+ +D KE + F T KK+ + +
Sbjct: 160 IFEVIDFF--LSEECKYIKLNGLMTIGSWNVSHEDSKE-NRDFATLVEWKKKIDAKFGTS 216
Query: 192 SVLSMGMSDDFELAIACGANLLRIGSFLF 220
LSMGMS DF AI G +RIG+ +F
Sbjct: 217 LKLSMGMSADFREAIRQGTAEVRIGTDIF 245
>ref|NP_359102.1| (NC_003098) Conserved hypothetical protein [Streptococcus
pneumoniae R6]
gb|AAL00313.1| (AE008519) Conserved hypothetical protein [Streptococcus pneumoniae
R6]
Length = 223
Score = 94.4 bits (233), Expect = 8e-19
Identities = 65/213 (30%), Positives = 108/213 (50%), Gaps = 12/213 (5%)
Query: 16 EKARTAYSRHHIVKIVAVSKNASPEAIQHYYNCSQRAFGENKVQDLKTKMHSLEHLPLEW 75
E + +A+ V ++AV K + GEN+V K +L+ + W
Sbjct: 16 EASLSAHRESGSVSVIAVIKYVDVPTAEALLPLGVHHIGENRVDKFLEKYEALKDRDVTW 75
Query: 76 HMIGSLQENKINALLSLKPALLHSLDSLKLALKIEKRCEILGVNLNALLQVNSAYEESKS 135
H+IG+LQ K+ ++ H+LDS+KLA +I+KR + + + LQVN + EESK
Sbjct: 76 HLIGTLQRRKVKDVIQYVD-YFHALDSVKLAGEIQKRSDRV---IKCFLQVNISKEESKH 131
Query: 136 GVVPEEALEIYSQISETCKHLKLKGLMCIGAHTDDEKEIEKSFITTKKLFDQIKNASV-- 193
G EE LEI +++ K ++ GLM + +++++ F + L +I+ +
Sbjct: 132 GFSREELLEILPELARLDK-IEYVGLMTMAPFEASSEQLKEIFKAAQDLQREIQEKQIPN 190
Query: 194 -----LSMGMSDDFELAIACGANLLRIGSFLFK 221
LSMGMS D++ AI G+ +RIG+ FK
Sbjct: 191 MPMTELSMGMSRDYKEAIQFGSTFVRIGTSFFK 223
>ref|NP_539159.1| (NC_003317) PHOSPHATE REGULON SENSOR PROTEIN PHOR [Brucella
melitensis]
gb|AAL51423.1| (AE009467) PHOSPHATE REGULON SENSOR PROTEIN PHOR [Brucella
melitensis]
Length = 226
Score = 94.0 bits (232), Expect = 1e-18
Identities = 72/218 (33%), Positives = 113/218 (51%), Gaps = 16/218 (7%)
Query: 8 IDALITKIEKARTAYSRHHIVKIVAVSKNASPEAIQHYYNCSQRAFGENKVQDLKTKMHS 67
+ A+I + EK A + V +VAVSK +AI+ + QR FGEN+VQ+ + K +
Sbjct: 11 VKAVIARAEKE--ARRENGSVTLVAVSKTFDAQAIRPALDAGQRVFGENRVQEAQGKWPA 68
Query: 68 LEH--LPLEWHMIGSLQENKINALLSLKPALLHSLDSLKLALKIEKRCEILGVNLNALLQ 125
L +E H+IG LQ NK ++L A + ++D K+A + G + +Q
Sbjct: 69 LREAWASIELHLIGPLQSNKAADAVALFDA-IETVDREKIAAALASEIRKQGKSPKLYVQ 127
Query: 126 VNSAYEESKSGVVPEEALEIYSQISETCKH---LKLKGLMCIGAHTDDEKEIEKSFITTK 182
VN+ E K+G+ P+EA+ E C+ L ++GLMCI ++ F +
Sbjct: 128 VNTGLEPQKAGIPPQEAVAFV----ERCRKEHGLVIEGLMCIPPAGENP---GPHFALLE 180
Query: 183 KLFDQIKNASVLSMGMSDDFELAIACGANLLRIGSFLF 220
KL + + LSMGMS D+E AI GA +R+G+ +F
Sbjct: 181 KLARE-AHVEKLSMGMSGDYETAIGFGATSVRVGAAIF 217
>ref|NP_471471.1| (NC_003212) similar to unknown proteins [Listeria innocua]
emb|CAC97367.1| (AL596171) similar to unknown proteins [Listeria innocua]
Length = 229
Score = 93.2 bits (230), Expect = 2e-18
Identities = 72/203 (35%), Positives = 101/203 (49%), Gaps = 14/203 (6%)
Query: 28 VKIVAVSKNASPEAIQHYYNCSQRAFGENKVQDLKTKMHSLEHLP-LEWHMIGSLQENKI 86
V +VAV+K I Y+ R FGEN+ K L + WH IGSLQ K+
Sbjct: 28 VTLVAVTKTIDVAGITELYDLGIRHFGENRADVFLDKTRELAGKDDICWHYIGSLQTRKV 87
Query: 87 NALLSLKPALLHSLDSLKLALKIEKRCEILGVNLNALLQVNSAYEESKSGVVPEEALEIY 146
+L + LHSLD LA +IEKR + LQVN + EESK G EEAL
Sbjct: 88 KDVLP-EIDYLHSLDRSSLAKEIEKRAT---KPIKCFLQVNISGEESKHGFSKEEALSFL 143
Query: 147 SQISETCKHLKLKGLMCIGAHTDDEKEIEKSFITTKKLFD-----QIKNA--SVLSMGMS 199
+ +++ GLM + T+ +KE+ F K+L Q+KN + LSMGM+
Sbjct: 144 QEAD--FNFIEIIGLMTMAPITNSDKELHHVFHELKQLQQEIHALQLKNVPCTELSMGMT 201
Query: 200 DDFELAIACGANLLRIGSFLFKE 222
+D+ +AI GA +R+G L +
Sbjct: 202 NDYGIAITEGATFIRVGRALVSD 224
>ref|NP_105035.1| (NC_002678) hypothetical protein [Mesorhizobium loti]
dbj|BAB50821.1| (AP003003) hypothetical protein [Mesorhizobium loti]
Length = 220
Score = 92.0 bits (227), Expect = 4e-18
Identities = 74/223 (33%), Positives = 111/223 (49%), Gaps = 9/223 (4%)
Query: 1 MLDYRQKIDALITKIEKA-RTAYSRHHIVKIVAVSKNASPEAIQHYYNCSQRAFGENKVQ 59
M D Q+ A+ KI A R A V +VAVSK I+ QR FGEN+VQ
Sbjct: 1 MGDTVQQFFAVKAKIAAAEREARREAGAVTLVAVSKTFDAADIRPVIEAGQRVFGENRVQ 60
Query: 60 DLKTKMHSLEHL--PLEWHMIGSLQENKINALLSLKPALLHSLDSLKLALKIEKRCEILG 117
+ + K L+ +E H+IG LQ NK ++L ++ ++D K+A ++ K G
Sbjct: 61 EAQGKWPDLKQAFADIELHLIGPLQSNKAKEAVALFD-VIETVDREKIAAELAKEIARQG 119
Query: 118 VNLNALLQVNSAYEESKSGVVPEEALEIYSQISETCKHLKLKGLMCIGAHTDDEKEIEKS 177
+QVN+ E K+G+ P A+ ++ + L ++GLMCI ++
Sbjct: 120 RAPKLYVQVNTGSEPQKAGIEPRAAIAFVTRCRDV-HGLAIEGLMCIPPADENPGP---H 175
Query: 178 FITTKKLFDQIKNASVLSMGMSDDFELAIACGANLLRIGSFLF 220
F +KL + LSMGMS D+E AIA GA +R+GS +F
Sbjct: 176 FALLEKLAREA-GVEKLSMGMSGDYETAIAFGATSVRVGSAIF 217
>ref|NP_465555.1| (NC_003210) similar to unknown proteins [Listeria monocytogenes
EGD-e]
emb|CAD00109.1| (AL591982) similar to unknown proteins [Listeria monocytogenes]
Length = 229
Score = 92.0 bits (227), Expect = 4e-18
Identities = 73/203 (35%), Positives = 103/203 (49%), Gaps = 14/203 (6%)
Query: 28 VKIVAVSKNASPEAIQHYYNCSQRAFGENKVQDLKTKMHSL-EHLPLEWHMIGSLQENKI 86
V +VAV+K I Y+ R FGEN+ K L + + WH IGSLQ K+
Sbjct: 28 VTLVAVTKTIDVTGITELYDLGIRHFGENRADVFLEKTVELADKDDICWHYIGSLQTRKV 87
Query: 87 NALLSLKPALLHSLDSLKLALKIEKRCEILGVNLNALLQVNSAYEESKSGVVPEEALEIY 146
+L + LHSLD LA +IEKR + LQVN + EESK G EEAL
Sbjct: 88 KDVLP-QIDYLHSLDRSSLAKEIEKRAT---KPVKCFLQVNISGEESKHGFSKEEALSFL 143
Query: 147 SQISETCKHLKLKGLMCIGAHTDDEKEIEKSFITTKKLFD-----QIKN--ASVLSMGMS 199
+ + T +++ GLM + T+ + E+ F K+L Q+KN + LSMGM+
Sbjct: 144 QEANFT--FIEIVGLMTMAPITNSDIELHHVFHELKQLQQEIHALQLKNIPCTELSMGMT 201
Query: 200 DDFELAIACGANLLRIGSFLFKE 222
+D+ +AI GA +RIG L +
Sbjct: 202 NDYGIAITEGATFIRIGRALVND 224
>ref|NP_269593.1| (NC_002737) conserved hypothetical protein [Streptococcus pyogenes]
[Streptococcus pyogenes M1 GAS]
gb|AAK34314.1| (AE006585) conserved hypothetical protein [Streptococcus pyogenes
M1 GAS]
Length = 223
Score = 87.8 bits (216), Expect = 8e-17
Identities = 63/200 (31%), Positives = 101/200 (50%), Gaps = 12/200 (6%)
Query: 28 VKIVAVSKNASPEAIQHYYNCSQRAFGENKVQDLKTKMHSLEHLPLEWHMIGSLQENKIN 87
V ++AV+K EN+V K +L+++P++WH+IG+LQ K+
Sbjct: 28 VSVIAVTKYVDSTIAGQLIEAGIEHIAENRVDKFLEKYDALKYMPVKWHLIGTLQRRKVK 87
Query: 88 ALLSLKPALLHSLDSLKLALKIEKRCEILGVNLNALLQVNSAYEESKSGVVPEEALEIYS 147
+++ H+LDS++LAL+I KR + + LQVN + EESK G E E
Sbjct: 88 EVINYVD-YFHALDSVRLALEINKRAD---HPVKCFLQVNISKEESKHGFNISEIDEAIG 143
Query: 148 QISETCKHLKLKGLMCIGAHTDDEKEIEKSFITTKKLFDQI-----KNA--SVLSMGMSD 200
+I + K ++L GLM + ++ I F +L + KN + LSMGMS+
Sbjct: 144 EIGKMEK-IQLVGLMTMAPANASKESIITIFRQANQLRKNLQLKKRKNMPFTELSMGMSN 202
Query: 201 DFELAIACGANLLRIGSFLF 220
D+ +AI G+ +RIG F
Sbjct: 203 DYPIAIQEGSTFIRIGRAFF 222
>ref|NP_607605.1| (NC_003485) conserved hypothetical protein [Streptococcus pyogenes
MGAS8232]
gb|AAL98104.1| (AE010068) conserved hypothetical protein [Streptococcus pyogenes
MGAS8232]
Length = 223
Score = 87.8 bits (216), Expect = 8e-17
Identities = 63/200 (31%), Positives = 101/200 (50%), Gaps = 12/200 (6%)
Query: 28 VKIVAVSKNASPEAIQHYYNCSQRAFGENKVQDLKTKMHSLEHLPLEWHMIGSLQENKIN 87
V ++AV+K EN+V K +L+++P++WH+IG+LQ K+
Sbjct: 28 VSVIAVTKYVDSTIAGQLIEAGIEHIAENRVDKFLEKYDALKYMPVKWHLIGTLQRRKVK 87
Query: 88 ALLSLKPALLHSLDSLKLALKIEKRCEILGVNLNALLQVNSAYEESKSGVVPEEALEIYS 147
+++ H+LDS++LAL+I KR + + LQVN + EESK G E E
Sbjct: 88 EVINYVD-YFHALDSVRLALEINKRAD---HPVKCFLQVNISKEESKHGFNISEIDEAIE 143
Query: 148 QISETCKHLKLKGLMCIGAHTDDEKEIEKSFITTKKLFDQI-----KNA--SVLSMGMSD 200
+I + K ++L GLM + ++ I F +L + KN + LSMGMS+
Sbjct: 144 EIGKMEK-IQLVGLMTMAPANASKESIITIFRQANQLRKNLQLKKRKNMPFTELSMGMSN 202
Query: 201 DFELAIACGANLLRIGSFLF 220
D+ +AI G+ +RIG F
Sbjct: 203 DYPIAIQEGSTFIRIGRAFF 222
>ref|NP_645888.1| (NC_003923) conserved hypothetical protein [Staphylococcus aureus
subsp. aureus MW2]
dbj|BAB94936.1| (AP004825) conserved hypothetical protein [Staphylococcus aureus
subsp. aureus MW2]
Length = 224
Score = 87.4 bits (215), Expect = 1e-16
Identities = 64/200 (32%), Positives = 103/200 (51%), Gaps = 13/200 (6%)
Query: 30 IVAVSKNASPEAIQHYYNCSQRAFGENKVQDLKTKMHSLEHLPLEWHMIGSLQENKINAL 89
++AV+K + E + Y R FGEN+++ K +L + H IGSLQ K+ +
Sbjct: 29 VIAVTKYVTIERAKEAYEAGIRHFGENRLEGFLQKKEALPSDAVI-HFIGSLQSRKVKGV 87
Query: 90 LSLKPALLHSLDSLKLALKIEKRCEILGVNLNALLQVNSAYEESKSGVVPEEALEIYSQI 149
++ H+LD L LA +I KR E + LQVN + E SK G+ E+ + +
Sbjct: 88 IN-DVDYFHALDRLSLAKEINKRAEH---KIKCFLQVNVSGEASKHGIALEDVDQFIDDL 143
Query: 150 SETCKHLKLKGLMCIGAHTDDEKEIEKSFITTKKLFDQIKNASV-------LSMGMSDDF 202
+ K +++ GLM + TDDE I F + ++I+ ++ LSMGMS+D+
Sbjct: 144 KKYDK-IEIVGLMTMAPLTDDEAYIRSLFKQLRLKKEEIQRLNLEYAPCDELSMGMSNDY 202
Query: 203 ELAIACGANLLRIGSFLFKE 222
+A+ GA +RIG+ L E
Sbjct: 203 LIAVEEGATFVRIGTKLVGE 222
>pdb|1CT5|A Chain A, Crystal Structure Of Yeast Hypothetical Protein Ybl036c-
Selenomet Crystal
Length = 256
Score = 87.4 bits (215), Expect = 1e-16
Identities = 74/207 (35%), Positives = 108/207 (51%), Gaps = 17/207 (8%)
Query: 28 VKIVAVSKNASPEAIQHYYNCSQRAFGENKVQDLKTKMHSLEHLPLEWHMIGSLQENKIN 87
+ ++ VSK IQ Y+ R FGEN VQ+L K L ++WH IG LQ NK
Sbjct: 41 ILLLVVSKLKPASDIQILYDHGVREFGENYVQELIEKAKLLPD-DIKWHFIGGLQTNKCK 99
Query: 88 ALLSLKPAL--LHSLDSLKLALKIEKRCEILGVNLNALL---QVNSAYEESKSGVVPE-E 141
L + P L + ++DSLK A K+ + + N +L Q+N+++E+ KSG+ E E
Sbjct: 100 DLAKV-PNLYSVETIDSLKKAKKLNESRAKFQPDCNPILCNVQINTSHEDQKSGLNNEAE 158
Query: 142 ALEIYS-QISETCKHLKLKGLMCIGAHT---DDEKEIEKSFIT----TKKLFDQIKNASV 193
E+ +SE CK++KL GL IG+ +D KE + F T KK+ + +
Sbjct: 159 IFEVIDFFLSEECKYIKLNGLXTIGSWNVSHEDSKE-NRDFATLVEWKKKIDAKFGTSLK 217
Query: 194 LSMGMSDDFELAIACGANLLRIGSFLF 220
LS G S DF AI G +RIG+ +F
Sbjct: 218 LSXGXSADFREAIRQGTAEVRIGTDIF 244
>ref|NP_371712.1| (NC_002758) conserved hypothetical protein [Staphylococcus aureus
subsp. aureus Mu50]
ref|NP_374304.1| (NC_002745) conserved hypothetical protein [Staphylococcus aureus
subsp. aureus N315]
gb|AAC95460.1| (AF068904) YlmE [Staphylococcus aureus]
dbj|BAB42283.1| (AP003132) conserved hypothetical protein [Staphylococcus aureus
subsp. aureus N315]
dbj|BAB57350.1| (AP003361) conserved hypothetical protein [Staphylococcus aureus
subsp. aureus Mu50]
Length = 224
Score = 86.3 bits (212), Expect = 2e-16
Identities = 64/200 (32%), Positives = 103/200 (51%), Gaps = 13/200 (6%)
Query: 30 IVAVSKNASPEAIQHYYNCSQRAFGENKVQDLKTKMHSLEHLPLEWHMIGSLQENKINAL 89
++AV+K + E + Y R FGEN+++ K +L + H IGSLQ K+ +
Sbjct: 29 VIAVTKYVTIERAKEAYEAGIRHFGENRLEGFFQKKEALPSDAVI-HFIGSLQSRKVKDV 87
Query: 90 LSLKPALLHSLDSLKLALKIEKRCEILGVNLNALLQVNSAYEESKSGVVPEEALEIYSQI 149
++ H+LD L LA +I KR E + LQVN + E SK G+ E+ + +
Sbjct: 88 IN-DVDYFHALDRLSLAKEINKRAEH---KIKCFLQVNVSGEASKHGIALEDVDQFIDDL 143
Query: 150 SETCKHLKLKGLMCIGAHTDDEKEIEKSFITTKKLFDQIKNASV-------LSMGMSDDF 202
+ K +++ GLM + TDDE I F + ++I+ ++ LSMGMS+D+
Sbjct: 144 KKYDK-IEIVGLMTMAPLTDDEAYIRSLFKQLRLKKEEIQRLNLEYAPCDELSMGMSNDY 202
Query: 203 ELAIACGANLLRIGSFLFKE 222
+A+ GA +RIG+ L E
Sbjct: 203 LIAVEEGATFVRIGTKLVGE 222
>ref|NP_522244.1| (NC_003296) CONSERVED HYPOTHETICAL PROTEIN [Ralstonia solanacearum]
emb|CAD17834.1| (AL646080) CONSERVED HYPOTHETICAL PROTEIN [Ralstonia solanacearum]
Length = 226
Score = 85.1 bits (209), Expect = 5e-16
Identities = 67/199 (33%), Positives = 94/199 (46%), Gaps = 8/199 (4%)
Query: 24 RHHIVKIVAVSKNASPEAIQHYYNCSQRAFGENKVQDLKTKMHSLE--HLPLEWHMIGSL 81
R V +VA SK IQ + FGEN+VQ+ +K L + +E H+IG L
Sbjct: 26 RADAVTLVAASKTVESHRIQKAIDLGLTVFGENRVQEAVSKWPELRSRNPGIELHLIGPL 85
Query: 82 QENKINALLSLKPALLHSLDSLKLALKIEKRCEILGVNLNALLQVNSAYEESKSGVVPEE 141
Q NK+ + L ++ S+D +LA I + E G +QVN E K GV+P E
Sbjct: 86 QSNKVRQAVDLFD-VIESVDRSRLARAIAEEAERQGHAPAIYIQVNVGKEPQKGGVLPAE 144
Query: 142 ALEIYSQISETCKHLKLKGLMCIGAHTDDEKEIEKSFITTKKLFDQIKNASVLSMGMSDD 201
A + + + + L ++GLMCI D + VLSMGMS D
Sbjct: 145 ASALIGECRDVYQ-LNVQGLMCIPPAGLDPS----GHFAGLRSIAADHGLHVLSMGMSAD 199
Query: 202 FELAIACGANLLRIGSFLF 220
+ AIA GA +R+GS LF
Sbjct: 200 YPQAIAQGATHVRVGSALF 218
>ref|NP_422539.1| (NC_002696) conserved hypothetical protein [Caulobacter crescentus
CB15]
gb|AAK25707.1| (AE006031) conserved hypothetical protein [Caulobacter crescentus
CB15]
Length = 217
Score = 85.1 bits (209), Expect = 5e-16
Identities = 67/195 (34%), Positives = 96/195 (48%), Gaps = 11/195 (5%)
Query: 28 VKIVAVSKNASPEAIQHYYNCSQRAFGENKVQDLKTKMHSLEHLPLEWHMIGSLQENKIN 87
V +VAVSK + I + Q+ FGEN+VQ+ + LE +IG LQ NK
Sbjct: 26 VTLVAVSKTQPWDHIAPVLDVGQKVFGENRVQEAMERWGP-HRQGLELRLIGPLQTNKAR 84
Query: 88 ALLSLKPALLHSLDSLKLALKIEKRCEILGVNLNALLQVNSAYEESKSGVVPEEALEIYS 147
+ ++ +LD KLA + + + G +QVN E K+GV P +A + +
Sbjct: 85 EAVGFFD-VIETLDREKLARVLAEEVQRAGKAPRLYVQVNVGQETQKAGVAPGDA-DSFI 142
Query: 148 QISETCKHLKLKGLMCIGAHTDDEKE--IEKSFITTKKLFDQIKNASVLSMGMSDDFELA 205
T L ++GLMCI D + + I + D+ LSMGMSDDFE+A
Sbjct: 143 GACRTTYGLTIEGLMCIPPFDQDPAPHFAQLASIAERNGLDK------LSMGMSDDFEIA 196
Query: 206 IACGANLLRIGSFLF 220
IA GA +R+GS LF
Sbjct: 197 IAQGATSVRVGSALF 211
>ref|NP_660861.1| (NC_004061) hypothetical 25.8 kD protein in gshB-ansB [Buchnera
aphidicola str. Sg (Schizaphis graminum)]
gb|AAM68072.1| (AE014127) hypothetical 25.8 kD protein in gshB-ansB [Buchnera
aphidicola str. Sg (Schizaphis graminum)]
Length = 229
Score = 80.1 bits (196), Expect = 2e-14
Identities = 60/209 (28%), Positives = 108/209 (50%), Gaps = 27/209 (12%)
Query: 28 VKIVAVSKNASPEAIQHYYNCSQRAFGENKVQDLKTKMHSLE-HLPLEWHMIGSLQENKI 86
+KI+AVSKN + I+ + FGEN VQ+ K+ L+ + + WH IG +Q NK
Sbjct: 29 IKIIAVSKNQGIDKIKLAISSGIHEFGENYVQEGIDKIQKLKKYQNIIWHFIGKVQSNKT 88
Query: 87 NALLSLKPALLHSLDSLKLALKIEKRCEILGVNLNALLQVNSAYEESKSGVVPEEALEIY 146
+++ ++D K+A+ + K E +N L+Q+N + E +K+G+ ++ Y
Sbjct: 89 K-IIAENFDWCQTIDREKIAILLNKYREKKSFPMNVLMQINISNEVTKNGI----CIKNY 143
Query: 147 SQISETCK---HLKLKGLMCIGAHTDDEKEIEKSFITTKK-------LFDQIK----NAS 192
++++T +L +G+M + E+EK I +F+++K +
Sbjct: 144 KKLAKTISLMPNLNFRGIMMM-------PEVEKKMIKQNDNYKNGNFIFNELKKEYQSID 196
Query: 193 VLSMGMSDDFELAIACGANLLRIGSFLFK 221
LS+G S D E A+ +N++RIG F+FK
Sbjct: 197 TLSLGTSFDIENALLFHSNMIRIGRFIFK 225
>ref|NP_295091.1| (NC_001263) conserved hypothetical protein [Deinococcus
radiodurans]
sp|Q9RUL6|YD68_DEIRA Hypothetical protein DR1368
pir||A75403 conserved hypothetical protein - Deinococcus radiodurans (strain
R1)
gb|AAF10940.1|AE001983_1 (AE001983) conserved hypothetical protein [Deinococcus radiodurans]
Length = 209
Score = 79.3 bits (194), Expect = 3e-14
Identities = 69/215 (32%), Positives = 106/215 (49%), Gaps = 11/215 (5%)
Query: 8 IDALITKIEKARTAYSRHH-IVKIVAVSKNASPEAIQHYYNC-SQRAFGENKVQDLKTKM 65
+ A++ I +A R V++VAV+K S + I+ EN+ Q+L+ K+
Sbjct: 3 VPAVLAGIREAEAQAGRAAGTVRLVAVTKGHSLDEIRGQVLAHGDFPLAENRGQELRDKV 62
Query: 66 HSLEHLPLEWHMIGSLQENKINALLSLKPALLHSLDSLKLALKIEKRCEILGVNLNALLQ 125
L EWH IG LQ NKI L + L+HS++ A I G LLQ
Sbjct: 63 AGLPGA--EWHFIGPLQRNKIKYLRGV--TLVHSIEEPWQAQAIADAAAEWGQAPAVLLQ 118
Query: 126 VNSAYEESKSGVVPEEALEIYSQISETCKHLKLKGLMCIGAHTDDEKEIEKSFITTKKLF 185
++ E K GV+P++ + ++ T L+++GLM + + DDE + F T +
Sbjct: 119 RHNG-EGQKHGVLPDDLPAVLREVRAT--GLEVRGLMAMAPY-DDEARAAQVFADTARQA 174
Query: 186 DQIKNASVLSMGMSDDFELAIACGANLLRIGSFLF 220
+ LSMGMS D+ LA+A GA L+R+G LF
Sbjct: 175 QDLGLVE-LSMGMSGDYPLAVAAGATLVRVGRSLF 208
>ref|NP_626339.1| (NC_003888) conserved hypothetical protein [Streptomyces coelicolor
A3(2)]
pir||T34950 hypothetical protein SC4A10.13c - Streptomyces coelicolor
emb|CAB51989.1| (AL109663) conserved hypothetical protein [Streptomyces coelicolor
A3(2)]
Length = 239
Score = 78.2 bits (191), Expect = 6e-14
Identities = 61/230 (26%), Positives = 107/230 (46%), Gaps = 14/230 (6%)
Query: 1 MLDYRQKIDALITKIEKART-----AYSRHHIVKIVAVSKNASPEAIQHYYNCSQRAFGE 55
M D + ++ A + K+E+ T A V ++ V+K + ++ R E
Sbjct: 1 MTDRKHELAANLAKVEQRITDACAAAGRPRQDVTLIVVTKTYPADDVRILSELGVRHVAE 60
Query: 56 NKVQDLKTKMHSLEHLPLEWHMIGSLQENKINALLSLKPALLHSLDSLKLALKIEKRCEI 115
N+ QD K + LPL WH +G LQ NK+ +++ ++ S+D +L + K
Sbjct: 61 NRDQDAAPKAAACSDLPLSWHFVGQLQTNKVRSVVGYAD-VVQSVDRARLVTALSKEAVR 119
Query: 116 LGVNLNALLQVNSAYEE---SKSGVVPEEALEIYSQISETCKHLKLKGLMCIGAHTDD-E 171
G + LLQV EE + G VP +E + + + L+L GLM + + +
Sbjct: 120 AGREVGCLLQVALDAEEGGRGERGGVPPAGIEELADLVAGSEGLRLDGLMTVAPLSGEYA 179
Query: 172 KEIEKSFITTKKLFDQIKN----ASVLSMGMSDDFELAIACGANLLRIGS 217
+ +F L +++ A+++S GMS D E A+A GA +R+G+
Sbjct: 180 GRQQAAFEHLMDLSTRVRRTHPAANMVSAGMSADLEQAVAAGATHVRVGT 229
>emb|CAB66326.1| (Y08964) putative YPT5 protein [Corynebacterium glutamicum]
Length = 221
Score = 70.9 bits (172), Expect = 1e-11
Identities = 56/198 (28%), Positives = 98/198 (49%), Gaps = 12/198 (6%)
Query: 28 VKIVAVSKNASPEAIQHYYNCSQRAFGENKVQDLKTKMHSLEHLPLEWHMIGSLQENKIN 87
V+++ V+K E I+ A GEN+ Q+ + K +LE +++HMIG +Q K N
Sbjct: 19 VRLLPVTKFHPVEDIKILQELGVTAVGENREQEARAK--ALELPDMDFHMIGQIQSKKAN 76
Query: 88 ALLSLKPALLHSLDSLKLALKIEK-------RCEILGVNLNALLQVNSAYEESKSGVVPE 140
++ A+ HS+DS K+A + + R + G L +Q++ + S+ G
Sbjct: 77 SIARWAAAV-HSVDSEKIAEALGRGVALALERGDRTGDELPCFIQLSLDGDPSRGGTPLS 135
Query: 141 EALEIYSQISETCKHLKLKGLMCIGA-HTDDEKEIEKSFITTKKLFDQIKNASVLSMGMS 199
+ ++ IS+T HL+ +GLMC+ D EK ++ L + + S GMS
Sbjct: 136 QVTQLADCISDTT-HLRFEGLMCVPPLGWDPEKAFSQARDVLSGLEEHFDRSLEFSAGMS 194
Query: 200 DDFELAIACGANLLRIGS 217
D AI G+ ++R+G+
Sbjct: 195 GDLIAAIKHGSTIVRVGT 212
>sp|O24748|YFZ1_CORGL Hypothetical 24.0 kDa protein in FTSZ 3'region
dbj|BAA21689.1| (AB003132) hypothetical protein similar to YPI1 or YPT5
[Corynebacterium glutamicum]
Length = 221
Score = 69.3 bits (168), Expect = 3e-11
Identities = 55/198 (27%), Positives = 97/198 (48%), Gaps = 12/198 (6%)
Query: 28 VKIVAVSKNASPEAIQHYYNCSQRAFGENKVQDLKTKMHSLEHLPLEWHMIGSLQENKIN 87
V+++ V+K E I+ A GEN+ Q+ + K +LE +++HMIG +Q K N
Sbjct: 19 VRLLPVTKFHPVEDIKILQELGVTAVGENREQEARAK--ALELPDMDFHMIGQIQSKKAN 76
Query: 88 ALLSLKPALLHSLDSLKLALKIEK-------RCEILGVNLNALLQVNSAYEESKSGVVPE 140
++ A+ HS+DS K+A + + R + L +Q++ + S+ G
Sbjct: 77 SIARWSAAV-HSVDSEKIAEALGRGVALALERGDRTSDELPCFIQLSLDGDPSRGGTPLS 135
Query: 141 EALEIYSQISETCKHLKLKGLMCIGA-HTDDEKEIEKSFITTKKLFDQIKNASVLSMGMS 199
+ ++ IS+T HL+ +GLMC+ D EK ++ L + + S GMS
Sbjct: 136 QVTQLADCISDTT-HLRFEGLMCVPPLGWDPEKAFSQARDVLSGLEEHFDRSLEFSAGMS 194
Query: 200 DDFELAIACGANLLRIGS 217
D AI G+ ++R+G+
Sbjct: 195 GDLVAAIKHGSTIVRVGT 212
>ref|NP_601355.1| (NC_003450) COG0325:Predicted enzyme with a TIM-barrel fold
[Corynebacterium glutamicum]
Length = 234
Score = 66.2 bits (160), Expect = 2e-10
Identities = 57/229 (24%), Positives = 109/229 (46%), Gaps = 17/229 (7%)
Query: 2 LDYRQKIDALITKIEKARTAYSRHH-----IVKIVAVSKNASPEAIQHYYNCSQRAFGEN 56
++ R+++ + +++ A H V+++ V+K E I+ A GEN
Sbjct: 1 MERREELQVRLQQVQARIDATLNEHNRPEGSVRLLPVTKFHPVEDIKILQEFGVTAVGEN 60
Query: 57 KVQDLKTKMHSLEHLPLEWHMIGSLQENKINALLSLKPALLHSLDSLKLALKIEK----- 111
+ Q+ + K +LE +++HMIG +Q K N+ ++ A +HS+DS K+A + +
Sbjct: 61 REQEARAK--ALELPDMDFHMIGQIQSKKANS-IARWAAAVHSVDSEKIAEALGRGVALA 117
Query: 112 --RCEILGVNLNALLQVNSAYEESKSGVVPEEALEIYSQISETCKHLKLKGLMCI-GAHT 168
R + L +Q++ + S+ G + ++ IS+T HL+ +GLMC+
Sbjct: 118 LDRGDRTSDELPCFIQLSLDGDPSRGGTPLSQVTQLADCISDT-THLRFEGLMCVPPLGW 176
Query: 169 DDEKEIEKSFITTKKLFDQIKNASVLSMGMSDDFELAIACGANLLRIGS 217
EK ++ L + + S GMS D AI G+ ++R+G+
Sbjct: 177 GPEKAFSQARDVLSGLEEHFDRSLEFSAGMSGDLVAAIKHGSTIVRVGT 225
>ref|NP_240355.1| (NC_002528) hypothetical protein [Buchnera sp. APS]
sp|P57614|Y549_BUCAI Hypothetical protein BU549
dbj|BAB13241.1| (AP001119) hypothetical protein [Buchnera sp. APS]
Length = 200
Score = 66.2 bits (160), Expect = 2e-10
Identities = 49/198 (24%), Positives = 99/198 (49%), Gaps = 8/198 (4%)
Query: 28 VKIVAVSKNASPEAIQHYYNCSQRAFGENKVQDLKTKMHSL-EHLPLEWHMIGSLQENKI 86
+ I+AVSKN + I+ FGEN +Q+ K+ +L ++ + WH IG +Q NK
Sbjct: 4 ITIIAVSKNRNINNIEEAIRSGINNFGENYLQESLIKIENLKKYKNITWHFIGKIQSNKT 63
Query: 87 NALLSLKPALLHSLDSLKLALKIEKRCEILGVNLNALLQVNSAYEESKSGVVPEEALEIY 146
++ + ++D K+A+ + K +N L+Q+N+ E + + + +
Sbjct: 64 KK-IAQNFSWCQTVDREKIAVLLNKFRPKNLPPINVLIQINNLKELQNNRYI--DQYQEL 120
Query: 147 SQISETCKHLKLKGLMCIGAHTDDEKEIEKSFITTKKLFDQIK----NASVLSMGMSDDF 202
+Q+ + +L L+G+M + + + E + K +F++ K + LS+G S D
Sbjct: 121 AQLILSMPNLNLRGIMAVPSIKTNVIENNLQYEKIKTIFNRFKRQYSSVDTLSLGTSVDI 180
Query: 203 ELAIACGANLLRIGSFLF 220
+ ++ +N++RIG +F
Sbjct: 181 KESLLATSNMVRIGRNIF 198
>sp|Q9CCE2|YL48_MYCLE Hypothetical protein ML0919
Length = 257
Score = 65.9 bits (159), Expect = 3e-10
Identities = 57/213 (26%), Positives = 103/213 (47%), Gaps = 25/213 (11%)
Query: 28 VKIVAVSK--NASPEAIQHYYNCSQRAFGENKVQDLKTKMHSLEHL---------PLEWH 76
++++ +SK A+ AI C R+ GE++ Q+ TK L + WH
Sbjct: 40 IELLPISKFFPATDVAILSRLGC--RSVGESRAQEASTKAAEFAELLGVSREEKSSIHWH 97
Query: 77 MIGSLQENKINALLSLKPALLHSLDSLKLALKIEKRCEILGVN------LNALLQVNSAY 130
M+G +Q NK+ +L HS+DSL+L +++ L +Q++
Sbjct: 98 MVGQIQRNKVRSLAQWAHTA-HSIDSLQLVAALDRAVAAALAGGRREQPLQVYVQISLDG 156
Query: 131 EESKSGV---VPEEALEIYSQISETCKHLKLKGLMCIGA-HTDDEKEIEKSFITTKKLFD 186
+ S+ GV P + +Q+ E+ K L+L GLM I + ++ E+ + +++
Sbjct: 157 DISRGGVNVTAPGAVDRVCAQVEES-KSLELVGLMGIPPLGWNPDQAFEQLRLEHRRVLR 215
Query: 187 QIKNASVLSMGMSDDFELAIACGANLLRIGSFL 219
+A LS GMS+DFE+A+ G+ +R+G+ L
Sbjct: 216 SHPDAIGLSAGMSNDFEIAVKHGSTCVRVGTAL 248
>ref|NP_301702.1| (NC_002677) possible DNA-binding protein [Mycobacterium leprae]
emb|CAC31300.1| (AL583920) possible DNA-binding protein [Mycobacterium leprae]
Length = 260
Score = 65.9 bits (159), Expect = 3e-10
Identities = 57/213 (26%), Positives = 103/213 (47%), Gaps = 25/213 (11%)
Query: 28 VKIVAVSK--NASPEAIQHYYNCSQRAFGENKVQDLKTKMHSLEHL---------PLEWH 76
++++ +SK A+ AI C R+ GE++ Q+ TK L + WH
Sbjct: 43 IELLPISKFFPATDVAILSRLGC--RSVGESRAQEASTKAAEFAELLGVSREEKSSIHWH 100
Query: 77 MIGSLQENKINALLSLKPALLHSLDSLKLALKIEKRCEILGVN------LNALLQVNSAY 130
M+G +Q NK+ +L HS+DSL+L +++ L +Q++
Sbjct: 101 MVGQIQRNKVRSLAQWAHTA-HSIDSLQLVAALDRAVAAALAGGRREQPLQVYVQISLDG 159
Query: 131 EESKSGV---VPEEALEIYSQISETCKHLKLKGLMCIGA-HTDDEKEIEKSFITTKKLFD 186
+ S+ GV P + +Q+ E+ K L+L GLM I + ++ E+ + +++
Sbjct: 160 DISRGGVNVTAPGAVDRVCAQVEES-KSLELVGLMGIPPLGWNPDQAFEQLRLEHRRVLR 218
Query: 187 QIKNASVLSMGMSDDFELAIACGANLLRIGSFL 219
+A LS GMS+DFE+A+ G+ +R+G+ L
Sbjct: 219 SHPDAIGLSAGMSNDFEIAVKHGSTCVRVGTAL 251
>dbj|BAB99546.1| (AP005280) Predicted enzyme with a TIM-barrel fold [Corynebacterium
glutamicum ATCC 13032]
Length = 221
Score = 65.9 bits (159), Expect = 3e-10
Identities = 54/198 (27%), Positives = 97/198 (48%), Gaps = 12/198 (6%)
Query: 28 VKIVAVSKNASPEAIQHYYNCSQRAFGENKVQDLKTKMHSLEHLPLEWHMIGSLQENKIN 87
V+++ V+K E I+ A GEN+ Q+ + K +LE +++HMIG +Q K N
Sbjct: 19 VRLLPVTKFHPVEDIKILQEFGVTAVGENREQEARAK--ALELPDMDFHMIGQIQSKKAN 76
Query: 88 ALLSLKPALLHSLDSLKLALKIEK-------RCEILGVNLNALLQVNSAYEESKSGVVPE 140
+ ++ A +HS+DS K+A + + R + L +Q++ + S+ G
Sbjct: 77 S-IARWAAAVHSVDSEKIAEALGRGVALALDRGDRTSDELPCFIQLSLDGDPSRGGTPLS 135
Query: 141 EALEIYSQISETCKHLKLKGLMCI-GAHTDDEKEIEKSFITTKKLFDQIKNASVLSMGMS 199
+ ++ IS+T HL+ +GLMC+ EK ++ L + + S GMS
Sbjct: 136 QVTQLADCISDT-THLRFEGLMCVPPLGWGPEKAFSQARDVLSGLEEHFDRSLEFSAGMS 194
Query: 200 DDFELAIACGANLLRIGS 217
D AI G+ ++R+G+
Sbjct: 195 GDLVAAIKHGSTIVRVGT 212
>dbj|BAB86202.1| (AP003735) hypothetical protein~similar to Oryza sativa chromosome
10, OSJNBa0056G17.33 [Oryza sativa (japonica
cultivar-group)]
Length = 348
Score = 65.1 bits (157), Expect = 5e-10
Identities = 40/118 (33%), Positives = 63/118 (52%), Gaps = 6/118 (5%)
Query: 96 LLHSLDSLKLALKIEKRCEILGVN-LNALLQVNSAYEESKSGVVPEEALEIYSQISETCK 154
++ +D++K+A +++ LG + L L+QVN++ EESKSG+ P +E+ + C
Sbjct: 19 MVEGVDNVKIANHLDRAVSSLGRDPLKVLVQVNTSGEESKSGIDPSRCVELAKHVKLACP 78
Query: 155 HLKLKGLMCIG-----AHTDDEKEIEKSFITTKKLFDQIKNASVLSMGMSDDFELAIA 207
HL GLM IG + ++ K + + K D LSMGMS DFE A+A
Sbjct: 79 HLIFSGLMTIGMKDYSSTPENFKALVNCKLEVCKAIDMPAEQFELSMGMSGDFEQAVA 136
>gb|EAA02478.1| (AAAB01004768) agCP4002 [Anopheles gambiae str. PEST]
Length = 165
Score = 64.7 bits (156), Expect = 7e-10
Identities = 45/123 (36%), Positives = 66/123 (53%), Gaps = 6/123 (4%)
Query: 18 ARTAYSRHHIVKIVAVSKNASPEAIQHYYNCSQRAFGENKVQDLKTKMHSLEH----LPL 73
+R SR HI +++AVSK EA+ Y QR FGE+ Q+ TK+ +L +
Sbjct: 20 SRAGRSRDHI-QLLAVSKTKPLEAVCEAYAAGQRRFGESYAQEAVTKIDTLREQGACADI 78
Query: 74 EWHMIGSLQENKINALLSLKPALLHSLDSLKLALKIEKRCEILGVNLNALLQVNSAYEES 133
EWH IG LQ NK + L++ + + S+D KL ++ + LN LQ+N + E S
Sbjct: 79 EWHFIGPLQSNK-SKLVAERFDWVQSVDREKLIERLNNQRPSGLAPLNVCLQINISGESS 137
Query: 134 KSG 136
KSG
Sbjct: 138 KSG 140
>ref|NP_216664.1| (NC_000962) hypothetical protein Rv2148c [Mycobacterium
tuberculosis H37Rv]
sp|O06228|YL48_MYCTU Hypothetical protein Rv2148c
pir||H70578 hypothetical protein Rv2148c - Mycobacterium tuberculosis (strain
H37RV)
emb|CAB08645.1| (Z95388) hypothetical protein Rv2148c [Mycobacterium tuberculosis
H37Rv]
Length = 258
Score = 59.7 bits (143), Expect = 2e-08
Identities = 53/212 (25%), Positives = 97/212 (45%), Gaps = 22/212 (10%)
Query: 28 VKIVAVSKNASPEAIQHYYNCSQRAFGENKVQDLKTKMHSLEHL----------PLEWHM 77
++++ ++K + + R+ GE++ Q+ KM L L + WHM
Sbjct: 40 IELLPITKFFPATDVAILFRLGCRSVGESREQEASAKMAELNRLLAAAELGHSGGVHWHM 99
Query: 78 IGSLQENKINALLSLKPALLHSLDSLKLALKIEKRCEIL------GVNLNALLQVNSAYE 131
+G +Q NK +L HS+DS +L +++ G L +QV+ +
Sbjct: 100 VGRIQRNKAGSLARWAHTA-HSVDSSRLVTALDRAVVAALAEHRRGERLRVYVQVSLDGD 158
Query: 132 ESKSGV---VPEEALEIYSQISETCKHLKLKGLMCIGA-HTDDEKEIEKSFITTKKLFDQ 187
S+ GV P I +Q+ E+ + L+L GLM I D ++ ++ ++
Sbjct: 159 GSRGGVDSTTPGAVDRICAQVQES-EGLELVGLMGIPPLDWDPDEAFDRLQSEHNRVRAM 217
Query: 188 IKNASVLSMGMSDDFELAIACGANLLRIGSFL 219
+A LS GMS+D E+A+ G+ +R+G+ L
Sbjct: 218 FPHAIGLSAGMSNDLEVAVKHGSTCVRVGTAL 249
>ref|NP_336677.1| (NC_002755) conserved hypothetical protein [Mycobacterium
tuberculosis CDC1551]
gb|AAK46491.1| (AE007068) conserved hypothetical protein [Mycobacterium
tuberculosis CDC1551]
Length = 264
Score = 59.7 bits (143), Expect = 2e-08
Identities = 53/212 (25%), Positives = 97/212 (45%), Gaps = 22/212 (10%)
Query: 28 VKIVAVSKNASPEAIQHYYNCSQRAFGENKVQDLKTKMHSLEHL----------PLEWHM 77
++++ ++K + + R+ GE++ Q+ KM L L + WHM
Sbjct: 46 IELLPITKFFPATDVAILFRLGCRSVGESREQEASAKMAELNRLLAAAELGHSGGVHWHM 105
Query: 78 IGSLQENKINALLSLKPALLHSLDSLKLALKIEKRCEIL------GVNLNALLQVNSAYE 131
+G +Q NK +L HS+DS +L +++ G L +QV+ +
Sbjct: 106 VGRIQRNKAGSLARWAHTA-HSVDSSRLVTALDRAVVAALAEHRRGERLRVYVQVSLDGD 164
Query: 132 ESKSGV---VPEEALEIYSQISETCKHLKLKGLMCIGA-HTDDEKEIEKSFITTKKLFDQ 187
S+ GV P I +Q+ E+ + L+L GLM I D ++ ++ ++
Sbjct: 165 GSRGGVDSTTPGAVDRICAQVQES-EGLELVGLMGIPPLDWDPDEAFDRLQSEHNRVRAM 223
Query: 188 IKNASVLSMGMSDDFELAIACGANLLRIGSFL 219
+A LS GMS+D E+A+ G+ +R+G+ L
Sbjct: 224 FPHAIGLSAGMSNDLEVAVKHGSTCVRVGTAL 255
>ref|XP_059934.2| (XM_059934) similar to Proline synthetase co-transcribed bacterial
homolog protein [Homo sapiens]
Length = 169
Score = 47.8 bits (112), Expect = 9e-05
Identities = 26/66 (39%), Positives = 37/66 (55%), Gaps = 4/66 (6%)
Query: 29 KIVAVSKNASPEAIQHYYNCSQRAFGENKVQDLKTKMHSLEHLPL----EWHMIGSLQEN 84
++VAVSK + + Y QR FGEN VQ+L K + + L L +WH IG LQ+
Sbjct: 76 RLVAVSKTKPADMVIEAYGHGQRTFGENYVQELLEKASNPKILSLCPEIKWHFIGHLQKQ 135
Query: 85 KINALL 90
+N L+
Sbjct: 136 NVNKLM 141
Database: /home/scwang/download_20020708_db/nr
Posted date: Aug 7, 2002 12:55 PM
Number of letters in database: 324,149,939
Number of sequences in database: 1,026,957
Lambda K H
0.318 0.133 0.368
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 126,664,698
Number of Sequences: 1026957
Number of extensions: 4808475
Number of successful extensions: 23017
Number of sequences better than 1.0e-02: 79
Number of HSP's better than 0.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 54
Number of HSP's that attempted gapping in prelim test: 22773
Number of HSP's gapped (non-prelim): 79
length of query: 222
length of database: 324,149,939
effective HSP length: 117
effective length of query: 105
effective length of database: 203,995,970
effective search space: 21419576850
effective search space used: 21419576850
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 95 (41.2 bits)