BLASTP 2.2.1 [Apr-13-2001]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|15645177|ref|NP_207347.1| conserved hypothetical
protein [Helicobacter pylori 26695]
(287 letters)
Database: /home/scwang/download_20020708_db/nr
1,026,957 sequences; 324,149,939 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_207347.1| (NC_000915) conserved hypothetical protein... 569 e-161
ref|NP_223217.1| (NC_000921) putative [Helicobacter pylori ... 537 e-152
ref|NP_281365.1| (NC_002163) putative methylase [Campylobac... 216 2e-55
ref|NP_621804.1| (NC_003869) predicted methyltransferases [... 159 3e-38
ref|NP_228518.1| (NC_000853) conserved hypothetical protein... 154 8e-37
ref|NP_240915.1| (NC_002570) BH0049~unknown conserved prote... 153 2e-36
ref|NP_346948.1| (NC_003030) Predicted methyltransferase [C... 151 9e-36
ref|NP_561196.1| (NC_003366) conserved hypothetical protein... 148 8e-35
ref|NP_488720.1| (NC_003272) tetrapyrrole methylase family ... 147 2e-34
ref|NP_266558.1| (NC_002662) HYPOTHETICAL PROTEIN [Lactococ... 146 2e-34
ref|NP_213759.1| (NC_000918) hypothetical protein [Aquifex ... 146 2e-34
ref|NP_653984.1| (NC_003995) TP_methylase, Tetrapyrrole (Co... 144 1e-33
ref|NP_463700.1| (NC_003210) conserved hypothetical protein... 142 3e-33
ref|NP_469555.1| (NC_003212) conserved hypothetical protein... 141 9e-33
ref|NP_441433.1| (NC_000911) hypothetical protein [Synechoc... 140 1e-32
ref|NP_325885.1| (NC_002771) conserved hypothetical protein... 139 4e-32
ref|NP_387917.1| (NC_000964) similar to hypothetical protei... 139 4e-32
ref|NP_371013.1| (NC_002758) conserved hypothetical protein... 138 6e-32
ref|NP_604101.1| (NC_003454) Methyltransferase [Fusobacteri... 138 6e-32
ref|NP_360795.1| (NC_003103) unknown [Rickettsia conorii] >... 138 6e-32
ref|NP_407004.1| (NC_003143) putative tetrapyrrole methylas... 137 2e-31
ref|NP_275076.1| (NC_003112) conserved hypothetical protein... 136 3e-31
ref|NP_283174.1| (NC_003116) hypothetical protein NMA0342 [... 136 3e-31
ref|NP_239924.1| (NC_002528) hypotheical protein [Buchnera ... 136 3e-31
gb|AAD25734.1|AF100324_2 (AF100324) YabC protein [Mycoplasm... 135 4e-31
ref|NP_439796.1| (NC_000907) conserved hypothetical protein... 135 4e-31
ref|NP_268717.1| (NC_002737) conserved hypothetical protein... 135 7e-31
emb|CAA10788.1| (AJ132803) hypothetical protein [Staphyloco... 134 9e-31
ref|NP_289722.1| (NC_002655) orf, hypothetical protein [Esc... 134 9e-31
ref|NP_072718.1| (NC_000908) conserved hypothetical protein... 134 1e-30
ref|NP_245582.1| (NC_002663) unknown [Pasteurella multocida... 132 3e-30
ref|NP_606690.1| (NC_003485) conserved hypothetical protein... 132 3e-30
ref|NP_457647.1| (NC_003198) conserved hypothetical protein... 132 3e-30
ref|NP_462176.1| (NC_003197) putative methyltransferase [Sa... 132 6e-30
ref|NP_221099.1| (NC_000963) unknown [Rickettsia prowazekii... 130 2e-29
ref|NP_662529.1| (NC_002932) tetrapyrrole methylase family ... 129 4e-29
ref|NP_230233.1| (NC_002505) conserved hypothetical protein... 129 5e-29
sp|Q08329|YFM4_MICOL Hypothetical protein in FMRO 3'region ... 129 5e-29
ref|NP_345422.1| (NC_003028) tetrapyrrole methylase family ... 128 6e-29
ref|NP_384442.1| (NC_003047) CONSERVED HYPOTHETICAL PROTEIN... 128 8e-29
ref|NP_078027.1| (NC_002162) conserved hypothetical [Ureapl... 127 1e-28
ref|NP_641119.1| (NC_003919) conserved hypothetical protein... 127 2e-28
ref|NP_540687.1| (NC_003317) METHYLTRANSFERASE [Brucella me... 126 2e-28
ref|NP_105455.1| (NC_002678) hypothetical protein [Mesorhiz... 126 3e-28
ref|NP_294359.1| (NC_001263) conserved hypothetical protein... 124 2e-27
ref|NP_636104.1| (NC_003902) conserved hypothetical protein... 122 5e-27
ref|NP_660442.1| (NC_004061) hypothetical 31.3 kD protein i... 121 8e-27
ref|NP_253112.1| (NC_002516) conserved hypothetical protein... 120 1e-26
ref|NP_297842.1| (NC_002488) conserved hypothetical protein... 120 2e-26
ref|NP_531008.1| (NC_003304) tetrapyrrole methylase family ... 120 2e-26
ref|NP_109759.1| (NC_000912) hypothetical protein (yabC) ho... 120 2e-26
ref|NP_521385.1| (NC_003295) HYPOTHETICAL TRANSMEMBRANE PRO... 114 9e-25
gb|AAD19411.1| (AF102543) unknown [Zymomonas mobilis] 113 2e-24
ref|NP_175126.1| (NM_103586) hypothetical protein [Arabidop... 113 3e-24
ref|NP_219412.1| (NC_000919) conserved hypothetical protein... 112 6e-24
ref|NP_212561.1| (NC_001318) conserved hypothetical protein... 108 5e-23
ref|NP_418963.1| (NC_002696) tetrapyrrole methylase family ... 108 9e-23
ref|NP_600118.1| (NC_003450) COG0313:Predicted methyltransf... 104 1e-21
dbj|BAB98284.1| (AP005276) Predicted methyltransferases [Co... 104 1e-21
gb|AAF69160.1|AC007915_12 (AC007915) F27F5.18 [Arabidopsis ... 100 2e-20
ref|NP_627369.1| (NC_003888) conserved hypothetical protein... 95 1e-18
ref|NP_353332.1| (NC_003062) AGR_C_523p [Agrobacterium tume... 93 4e-18
ref|NP_301265.1| (NC_002677) conserved hypothetical protein... 87 2e-16
gb|AAF69573.1|AC022473_9 (AC022473) L354.10 [Leishmania major] 87 3e-16
ref|NP_335468.1| (NC_002755) tetrapyrrole methylase family ... 87 3e-16
ref|NP_215519.1| (NC_000962) hypothetical protein Rv1003 [M... 87 3e-16
ref|NP_519166.1| (NC_003295) PROBABLE TRANSMEMBRANE PROTEIN... 67 2e-10
ref|NP_283363.1| (NC_003116) hypothetical protein NMA0547 [... 66 4e-10
ref|NP_274902.1| (NC_003112) conserved hypothetical protein... 65 9e-10
ref|NP_300439.1| (NC_002491) SAM-dependent methytransferase... 63 3e-09
ref|NP_224582.1| (NC_000922) SAM-Dependent Methytransferase... 60 3e-08
ref|NP_219551.1| (NC_000117) SAM-dependent methyltransferas... 49 6e-05
ref|NP_296697.1| (NC_002620) conserved hypothetical protein... 48 1e-04
>ref|NP_207347.1| (NC_000915) conserved hypothetical protein [Helicobacter pylori
26695]
sp|P56204|Y552_HELPY Hypothetical protein HP0552
pir||H64588 conserved hypothetical protein HP0552 - Helicobacter pylori
(strain 26695)
gb|AAD07618.1| (AE000569) conserved hypothetical protein [Helicobacter pylori
26695]
Length = 287
Score = 569 bits (1467), Expect = e-161
Identities = 287/287 (100%), Positives = 287/287 (100%)
Query: 1 MLYFLPTPIGNLADITLRALEVLERCEVFLCEDTRVSKRLLHLLAQNPIISHSFPNIATK 60
MLYFLPTPIGNLADITLRALEVLERCEVFLCEDTRVSKRLLHLLAQNPIISHSFPNIATK
Sbjct: 1 MLYFLPTPIGNLADITLRALEVLERCEVFLCEDTRVSKRLLHLLAQNPIISHSFPNIATK 60
Query: 61 KREFIAFHSHNDQEFLNQIKPSFFDKEIAVMSDAGMPSLSDPGMSLAAYALKHNIQYDVL 120
KREFIAFHSHNDQEFLNQIKPSFFDKEIAVMSDAGMPSLSDPGMSLAAYALKHNIQYDVL
Sbjct: 61 KREFIAFHSHNDQEFLNQIKPSFFDKEIAVMSDAGMPSLSDPGMSLAAYALKHNIQYDVL 120
Query: 121 PGANALTTAFCASGFLEGRFFYAGFLPHKSKERRLKIAKILNALAYLEEKTPVVFYESPH 180
PGANALTTAFCASGFLEGRFFYAGFLPHKSKERRLKIAKILNALAYLEEKTPVVFYESPH
Sbjct: 121 PGANALTTAFCASGFLEGRFFYAGFLPHKSKERRLKIAKILNALAYLEEKTPVVFYESPH 180
Query: 181 RLLETLKDLNDLAKGMHLFAAKELTKLHQQYYLGEVSQIIERLQQSTIQGEWVLVLLNEK 240
RLLETLKDLNDLAKGMHLFAAKELTKLHQQYYLGEVSQIIERLQQSTIQGEWVLVLLNEK
Sbjct: 181 RLLETLKDLNDLAKGMHLFAAKELTKLHQQYYLGEVSQIIERLQQSTIQGEWVLVLLNEK 240
Query: 241 KIEPCMGLSALLELDLPPKIKAKIEAVMTQKNAKELYFQRLLEEKNQ 287
KIEPCMGLSALLELDLPPKIKAKIEAVMTQKNAKELYFQRLLEEKNQ
Sbjct: 241 KIEPCMGLSALLELDLPPKIKAKIEAVMTQKNAKELYFQRLLEEKNQ 287
>ref|NP_223217.1| (NC_000921) putative [Helicobacter pylori J99]
sp|Q9ZLS8|Y552_HELPJ Hypothetical protein JHP0499
pir||F71924 hypothetical protein jhp0499 - Helicobacter pylori (strain J99)
gb|AAD06077.1| (AE001483) putative [Helicobacter pylori J99]
Length = 289
Score = 537 bits (1383), Expect = e-152
Identities = 267/287 (93%), Positives = 278/287 (96%)
Query: 1 MLYFLPTPIGNLADITLRALEVLERCEVFLCEDTRVSKRLLHLLAQNPIISHSFPNIATK 60
MLYFLPTPIGNLADITLR LEVLERCEVFLCEDTRVSKRLLHLLA+NPIISHSFPNIA K
Sbjct: 1 MLYFLPTPIGNLADITLRTLEVLERCEVFLCEDTRVSKRLLHLLAKNPIISHSFPNIAAK 60
Query: 61 KREFIAFHSHNDQEFLNQIKPSFFDKEIAVMSDAGMPSLSDPGMSLAAYALKHNIQYDVL 120
KREFIAFHSHNDQEFLNQI+PSFFDKEIAVMSDAGMPSLSDPGMSL AYALKHN+QYDVL
Sbjct: 61 KREFIAFHSHNDQEFLNQIEPSFFDKEIAVMSDAGMPSLSDPGMSLVAYALKHNLQYDVL 120
Query: 121 PGANALTTAFCASGFLEGRFFYAGFLPHKSKERRLKIAKILNALAYLEEKTPVVFYESPH 180
PGANALTTAFCASGFLEGRFFYAGFLPHKSKERRL+I KILNALAYLEEKTPVVFYESPH
Sbjct: 121 PGANALTTAFCASGFLEGRFFYAGFLPHKSKERRLRIIKILNALAYLEEKTPVVFYESPH 180
Query: 181 RLLETLKDLNDLAKGMHLFAAKELTKLHQQYYLGEVSQIIERLQQSTIQGEWVLVLLNEK 240
RLLETL+DLNDLA+GMHLFAAKELTKLHQQYYLGE+SQI+ +LQ+S IQGEWVLVLLNEK
Sbjct: 181 RLLETLRDLNDLAQGMHLFAAKELTKLHQQYYLGEISQIMTQLQKSNIQGEWVLVLLNEK 240
Query: 241 KIEPCMGLSALLELDLPPKIKAKIEAVMTQKNAKELYFQRLLEEKNQ 287
KIEP MGLSALLELDLPPKIKAK+EA MTQKNAKELYFQRLLEEK Q
Sbjct: 241 KIEPSMGLSALLELDLPPKIKAKMEAAMTQKNAKELYFQRLLEEKKQ 287
>ref|NP_281365.1| (NC_002163) putative methylase [Campylobacter jejuni]
pir||B81433 probable methylase Cj0154c [imported] - Campylobacter jejuni
(strain NCTC 11168)
emb|CAB72638.1| (AL139074) putative methylase [Campylobacter jejuni]
Length = 274
Score = 216 bits (551), Expect = 2e-55
Identities = 118/286 (41%), Positives = 181/286 (63%), Gaps = 15/286 (5%)
Query: 1 MLYFLPTPIGNLADITLRALEVLERCEVFLCEDTRVSKRLLHLLAQNPIISHSFPNIATK 60
MLYF+PTPIGNL+DI+ RALE+L+ C++ CEDTRVSK L+ LL H+ +I+
Sbjct: 1 MLYFIPTPIGNLSDISFRALELLKTCDLVFCEDTRVSKSLISLLNTK---FHTDIHIS-- 55
Query: 61 KREFIAFHSHNDQEFLNQIKPSFFDKEIAVMSDAGMPSLSDPGMSLAAYALKHNIQYDVL 120
+FIA HSHN++E L I F+K +A +SDAGMP +SDPG +L +A ++NI Y++L
Sbjct: 56 --KFIALHSHNEKEVLASIDLKIFEKNVAYLSDAGMPGISDPGKALVEFAQENNITYEIL 113
Query: 121 PGANALTTAFCASGFLEGRFFYAGFLPHKSKERRLKIAKILNALAYLEEKTPVVFYESPH 180
PGANA A +S F + F + GFL +K KER+ I KILN P + YESP
Sbjct: 114 PGANAALVALVSSAFCQKEFIFIGFLANKGKERQKDIEKILNF------PYPSIIYESPK 167
Query: 181 RLLETLKDLNDLAKGMHLFAAKELTKLHQQYYLGEVSQIIERLQQSTIQGEWVLVLLNEK 240
R+L ++ + L +F KE++K ++ + G ++ E L++S + GEWV+VL +++
Sbjct: 168 RILSLVEQIMILDNQREIFLIKEISKKFEKKFKGNAKELSEILKKSNLNGEWVVVLQSKE 227
Query: 241 K--IEPCMGLSALLELDLPPKIKAKIEAVMTQKNAKELYFQRLLEE 284
+ ++ + +++L+L K KAK+ + + KNAKE+Y + LL +
Sbjct: 228 QNFLQNTLCEKDIMDLELSLKAKAKLLSKINGKNAKEIYQKLLLSQ 273
>ref|NP_621804.1| (NC_003869) predicted methyltransferases [Thermoanaerobacter
tengcongensis]
gb|AAM23408.1| (AE012984) predicted methyltransferases [Thermoanaerobacter
tengcongensis]
Length = 275
Score = 159 bits (403), Expect = 3e-38
Identities = 104/284 (36%), Positives = 153/284 (53%), Gaps = 32/284 (11%)
Query: 2 LYFLPTPIGNLADITLRALEVLERCEVFLCEDTRVSKRLLHLLAQNPIISHSFPNIATKK 61
LY PTPIGNL DITLR L VL ++ EDTR + +LL N K
Sbjct: 7 LYLCPTPIGNLEDITLRVLRVLSEVDLIAAEDTRQTLKLL--------------NHYEIK 52
Query: 62 REFIAFHSHND----QEFLNQIKPSFFDKEIAVMSDAGMPSLSDPGMSLAAYALKHNIQY 117
+ +++H HN + + ++K K IA+++DAG PS+SDPG L ++ I+
Sbjct: 53 KSLVSYHEHNKVTMGPKLIEKLKSG---KSIALVTDAGTPSISDPGEELVRLCIQEGIKI 109
Query: 118 DVLPGANALTTAFCASGFLEGRFFYAGFLPHKSKERRLKIAKILNALAYLEEKTPVVFYE 177
LPG A TA ASG F + GFLP KSKERR K+ +I EE+T + YE
Sbjct: 110 VPLPGPTAAITALIASGLDASSFVFEGFLPKKSKERREKLERISR-----EERT-TILYE 163
Query: 178 SPHRLLETLKDLNDLAKGMHLFAAKELTKLHQQYYLGEVSQIIERLQQSTIQGEWVLVLL 237
SPHRL ETLK+L + + A+ELTK+H+++ G V +++E+L + ++GE V+V+
Sbjct: 164 SPHRLKETLKELKEYIGERKVVVARELTKIHEEFIRGTVEEVLEKLGEE-VKGEIVIVIE 222
Query: 238 NEK----KIEPCMGLSALLELDLPPKIKAKIEAVMTQKNAKELY 277
K + +P L L+L + K K A + + +E+Y
Sbjct: 223 GAKISPLQKDPKELLDKYLKLGMDKKEAVKKVAEELKVSKREVY 266
>ref|NP_228518.1| (NC_000853) conserved hypothetical protein [Thermotoga maritima]
sp|Q9WZG8|Y709_THEMA Hypothetical protein TM0709
pir||D72343 conserved hypothetical protein - Thermotoga maritima (strain MSB8)
gb|AAD35791.1|AE001742_6 (AE001742) conserved hypothetical protein [Thermotoga maritima]
Length = 222
Score = 154 bits (390), Expect = 8e-37
Identities = 89/237 (37%), Positives = 138/237 (57%), Gaps = 24/237 (10%)
Query: 2 LYFLPTPIGNLADITLRALEVLERCEVFLCEDTRVSKRLLHLLAQNPIISHSFPNIATKK 61
L + TPIGNL DIT+RAL+ L ++ L EDTR + LL N K
Sbjct: 4 LIIVGTPIGNLEDITIRALKTLREVDLILAEDTRRTMVLL--------------NKYRIK 49
Query: 62 REFIAFHSHNDQEFLNQIKPSFFD-KEIAVMSDAGMPSLSDPGMSLAAYALKHNIQYDVL 120
+ ++F+ N ++ + +I P + K++A++SDAGMP +SDPG +L + I+ D++
Sbjct: 50 KPLLSFNERNSKKRIKEILPLLKEGKKVAIVSDAGMPVISDPGYNLVEECWREGIEVDIV 109
Query: 121 PGANALTTAFCASGFLEGRFFYAGFLPH-KSKERRLKIAKILNALAYLEEKTPVVFYESP 179
PG +ALT+A SGF +F + GFLP K++ R LK K +E +VF+ESP
Sbjct: 110 PGPSALTSAVAVSGFPGSKFIFEGFLPRGKNRRRLLKSLK--------KENRVIVFFESP 161
Query: 180 HRLLETLKDLNDLAKGMHLFAAKELTKLHQQYYLGEVSQIIERLQQSTIQGEWVLVL 236
RLL TL+D+ ++ +F A+E+TKLHQ+++ G+VS+ I ++ GE +VL
Sbjct: 162 ERLLSTLRDILEIIGDREVFIAREMTKLHQEFFRGKVSEAISHFEKKKPLGEITVVL 218
>ref|NP_240915.1| (NC_002570) BH0049~unknown conserved protein [Bacillus halodurans]
sp|Q9KGL2|Y049_BACHD Hypothetical protein BH0049
dbj|BAB03768.1| (AP001507) BH0049~unknown conserved protein [Bacillus halodurans]
Length = 289
Score = 153 bits (387), Expect = 2e-36
Identities = 88/245 (35%), Positives = 139/245 (55%), Gaps = 22/245 (8%)
Query: 2 LYFLPTPIGNLADITLRALEVLERCEVFLCEDTRVSKRLLHLLAQNPIISHSFPNIATKK 61
LY + TPIGNL D+T RA+ L+ + EDTR +K+LL+ +IATK
Sbjct: 16 LYLVATPIGNLEDVTFRAIRTLKEADQIAAEDTRQTKKLLNHF-----------DIATK- 63
Query: 62 REFIAFHSHNDQEFLNQIKPSFFD-KEIAVMSDAGMPSLSDPGMSLAAYALKHNIQYDVL 120
+++H HN + ++ + + IA++SDAGMP++SDPG L A+K I +
Sbjct: 64 --LVSYHEHNKETMGKRLIDDLIEGRTIALVSDAGMPAISDPGYELVVSAIKEGIAVIPI 121
Query: 121 PGANALTTAFCASGFLEGRFFYAGFLPHKSKERRLKIAKILNALAYLEEKTPVVFYESPH 180
PGANA TA ASG F + GFLP + K+RR + + K ++FYESPH
Sbjct: 122 PGANAAVTALIASGLPTESFQFIGFLPRQKKQRRQALEET------KPTKATLIFYESPH 175
Query: 181 RLLETLKDLNDLAKGMHLFAAKELTKLHQQYYLGEVSQIIERLQQSTIQGEWVLVLL-NE 239
RL +TL D+ + H+ +ELTK ++++ G + + + +++TI+GE+ L++ N
Sbjct: 176 RLKDTLDDMLLILGNRHVSICRELTKTYEEFLRGTLEEAVHWAREATIKGEFCLIVEGNG 235
Query: 240 KKIEP 244
+K+EP
Sbjct: 236 EKVEP 240
>ref|NP_346948.1| (NC_003030) Predicted methyltransferase [Clostridium
acetobutylicum]
gb|AAK78288.1|AE007545_5 (AE007545) Predicted methyltransferase [Clostridium acetobutylicum]
Length = 282
Score = 151 bits (381), Expect = 9e-36
Identities = 85/243 (34%), Positives = 141/243 (57%), Gaps = 21/243 (8%)
Query: 2 LYFLPTPIGNLADITLRALEVLERCEVFLCEDTRVSKRLL-HLLAQNPIISHSFPNIATK 60
L+ + TPIGNL DITLRALE L+ C+V EDTR S +LL H + P+IS+ N
Sbjct: 6 LFLVGTPIGNLKDITLRALETLQNCDVIAAEDTRQSLKLLNHFDIKKPLISYHKFN---- 61
Query: 61 KREFIAFHSHNDQEFLNQIKPSFFDKEIAVMSDAGMPSLSDPGMSLAAYALKHNIQYDVL 120
++ E ++ ++ K++A+++DAGMP +SDPG + +++N++++V+
Sbjct: 62 -------ENNRSSELMDMVREG---KKVALVTDAGMPGISDPGSVIVEKFIENNLEFEVI 111
Query: 121 PGANALTTAFCASGFLEGRFFYAGFLPHKSKERRLKIAKILNALAYLEEKTPVVFYESPH 180
PG AL TA SG +F + GFLP ++K+R++ + ++ N K ++FYE+PH
Sbjct: 112 PGPTALITALVYSGLDTSKFVFRGFLPKETKDRKIVMEEVKNV------KDTLIFYEAPH 165
Query: 181 RLLETLKDLNDLAKGMHLFAAKELTKLHQQYYLGEVSQIIERLQQSTIQGEWVLVLLNEK 240
+LL TL L D + +ELTKLH++ + IE + + +GE+VL++ +
Sbjct: 166 KLLNTLGFLFDNLGDREIAICRELTKLHEEIKHTTLKSAIEFYESTKPKGEYVLIIEGKS 225
Query: 241 KIE 243
+ E
Sbjct: 226 EEE 228
>ref|NP_561196.1| (NC_003366) conserved hypothetical protein [Clostridium
perfringens]
dbj|BAB79986.1| (AP003186) conserved hypothetical protein [Clostridium perfringens]
Length = 280
Score = 148 bits (373), Expect = 8e-35
Identities = 87/249 (34%), Positives = 139/249 (54%), Gaps = 31/249 (12%)
Query: 2 LYFLPTPIGNLADITLRALEVLERCEVFLCEDTRVSKRLL-HLLAQNPIISHSFPNIATK 60
+Y +PTPIGNL DITLRALEVL+ ++ EDTR + +LL H + P+IS
Sbjct: 4 VYLVPTPIGNLGDITLRALEVLKSVDLIAAEDTRQTLKLLNHFEIKKPLIS--------- 54
Query: 61 KREFIAFHSHNDQ----EFLNQIKPSFFDKEIAVMSDAGMPSLSDPGMSLAAYALKHNIQ 116
+H HN+Q E L ++K +A++SDAG P +SDPG + ++ I+
Sbjct: 55 ------YHKHNEQGKGEEILRRVKEG---TSVAIVSDAGTPGISDPGSVVVEKCIEEGIE 105
Query: 117 YDVLPGANALTTAFCASGFLEGRFFYAGFLPHKSKERRLKIAKILNALAYLEEKTPVVFY 176
++VLPGA A TTA SG +F + GF P ++K++R I I + ++ Y
Sbjct: 106 FEVLPGATAFTTALIYSGLDTTKFMFKGFFPRENKDKRSFIEDI------KDRTETIIIY 159
Query: 177 ESPHRLLETLKDLNDLAKGMHLFAAKELTKLHQQYYLGEVSQIIERLQQSTIQGEWVLVL 236
ESP+R+L+T+ L + + +ELTKLH++ + G + + +++ +GE+V V+
Sbjct: 160 ESPYRILDTIDTLKEGLGNRKVAICRELTKLHEEIFRGTLEEAKIHFEENAPKGEFVCVI 219
Query: 237 --LNEKKIE 243
+K+IE
Sbjct: 220 SGKTDKEIE 228
>ref|NP_488720.1| (NC_003272) tetrapyrrole methylase family protein [Nostoc sp. PCC
7120]
dbj|BAB76379.1| (AP003597) tetrapyrrole methylase family protein [Nostoc sp. PCC
7120]
Length = 285
Score = 147 bits (370), Expect = 2e-34
Identities = 93/272 (34%), Positives = 144/272 (52%), Gaps = 33/272 (12%)
Query: 2 LYFLPTPIGNLADITLRALEVLERCEVFLCEDTRVSKRLL-HLLAQNPIISHSFPNIATK 60
LY + TPIGNL DIT RA+ +L+ ++ EDTR + +LL HL + P +S
Sbjct: 10 LYIVGTPIGNLEDITFRAVRILQNVDLIAAEDTRHTGKLLQHLQVKTPQVS--------- 60
Query: 61 KREFIAFHSHNDQEFLNQI-KPSFFDKEIAVMSDAGMPSLSDPGMSLAAYALKHNIQYDV 119
+H HN + ++ K K IA++SDAGMP +SDPG L ++ I
Sbjct: 61 ------YHEHNRTSRIPELLKHLHSGKAIALVSDAGMPGISDPGYELVKACVEVAIPVVP 114
Query: 120 LPGANALTTAFCASGFLEGRFFYAGFLPHKSKERRLKIAKILNALAYLEEKTPVVFYESP 179
+PGA+A TA A+G +F + GFLP K ++RR + A E ++FYESP
Sbjct: 115 IPGASAAITALSAAGLPTDKFVFEGFLPAKGQQRREHLE------ALQTESRTLIFYESP 168
Query: 180 HRLLETLKDLNDL-AKGMHLFAAKELTKLHQQYYLGEVSQIIERLQQSTIQGEWVLVLLN 238
HRL ETL+DL ++ + A+ELTKL+++++ G + + I QQ QGE+ L++
Sbjct: 169 HRLRETLQDLAEVWGSDRQIVLARELTKLYEEFWRGSIGEAIAHYQQKEPQGEYTLLVAG 228
Query: 239 EKKIEPCMGLSALLELDLPPKIKAKIEAVMTQ 270
E + ++KA+++ +M Q
Sbjct: 229 NPPSETLL---------TEEQLKAELQQLMMQ 251
>ref|NP_266558.1| (NC_002662) HYPOTHETICAL PROTEIN [Lactococcus lactis subsp. lactis]
gb|AAK04500.1|AE006276_15 (AE006276) HYPOTHETICAL PROTEIN [Lactococcus lactis subsp. lactis]
Length = 302
Score = 146 bits (369), Expect = 2e-34
Identities = 100/288 (34%), Positives = 154/288 (52%), Gaps = 34/288 (11%)
Query: 2 LYFLPTPIGNLADITLRALEVLERCEVFLCEDTRVSKRLL-HLLAQNPIISHSFPNIATK 60
LY +PTPIGN+ D+TLR+LE L+ ++ EDTR + RLL H + P S
Sbjct: 31 LYLVPTPIGNMQDMTLRSLETLKTVDLICSEDTRNTLRLLNHFEIKVPQES--------- 81
Query: 61 KREFIAFHSHNDQEFLNQIKPSFFDK--EIAVMSDAGMPSLSDPGMSLAAYALKHNIQYD 118
FH HN QE + ++ F K IA +SDAGMPS+SDPG L A+ I
Sbjct: 82 ------FHEHNSQEKIPKLI-DFLKKGQSIAQVSDAGMPSISDPGHDLVLAAIDEGIDVI 134
Query: 119 VLPGANALTTAFCASGFLEGRFFYAGFLPHKSKERRLKIAKILNALAYLEEKTPVVFYES 178
LPGA+A TA ASG + + GFLP K E++ K K + L+Y E + +FYES
Sbjct: 135 ALPGASAGITALIASGLVPQPHIFYGFLPRKKGEQQ-KFLK--SKLSYPETQ---IFYES 188
Query: 179 PHRLLETLKDLNDLAKGMHLFAAKELTKLHQQYYLGEVSQIIERLQQSTIQGEWVLVL-- 236
P R+ +TL ++ ++ + +ELTK++++Y G++S+++E L I+GE ++++
Sbjct: 189 PFRVGDTLANMQEIYGDREVVLVRELTKIYEEYRRGKISEVLESLTDQPIKGECLIIVSG 248
Query: 237 -------LNEKKIEPCMGLSALLELDLPPKIKAKIEAVMTQKNAKELY 277
+ E ++ + L+E + P + K A N +ELY
Sbjct: 249 ADEVAQEVQEPELTALEAVKVLVEQSVKPNVAIKQIAKERGLNRQELY 296
>ref|NP_213759.1| (NC_000918) hypothetical protein [Aquifex aeolicus]
pir||H70395 conserved hypothetical protein aq_1111 - Aquifex aeolicus
gb|AAC07168.1| (AE000724) hypothetical protein [Aquifex aeolicus]
Length = 221
Score = 146 bits (369), Expect = 2e-34
Identities = 84/235 (35%), Positives = 137/235 (57%), Gaps = 21/235 (8%)
Query: 2 LYFLPTPIGNLADITLRALEVLERCEVFLCEDTRVSKRLLHLLAQNPIISHSFPNIATKK 61
LY +PTPIGNL DITLRALEVL+ CEDTR + LL+ + K
Sbjct: 4 LYVIPTPIGNLKDITLRALEVLKEVNYIACEDTRRTMILLN-------------HYGIKG 50
Query: 62 REFIAFHSHNDQEFLNQIKPSFFDKEIAVMSDAGMPSLSDPGMSLAAYALKHNIQYDVLP 121
++ I+++ +++ + +I +++A+++DAGMP++SDPG L ++ I+ +VLP
Sbjct: 51 KKLISYYEPKEEKQIPKILKVLEKEDVALVTDAGMPAISDPGYRLIRKCIEKGIEIEVLP 110
Query: 122 GANALTTAFCASGFLEGRFFYAGFLPHKSKERRLKIAKILNALAYLEEKTPVVFYESPHR 181
G +A+ TA SG RF + GF P K + + K E T V+ +E+P+R
Sbjct: 111 GPSAVITALVGSGLPPDRFLFVGFPPKKGTKGFFEELKSC-------EDTTVILFENPNR 163
Query: 182 LLETLKDLNDLAKGMHLFAAKELTKLHQQYYLGEVSQIIERLQ-QSTIQGEWVLV 235
LL+TLK ++++ + A+ELTKLH++Y G + +II+ L+ + I+GE V++
Sbjct: 164 LLKTLKIIHEVFGNVQACVARELTKLHEEYIRGNLEEIIQELESREKIKGEVVVL 218
>ref|NP_653984.1| (NC_003995) TP_methylase, Tetrapyrrole (Corrin/Porphyrin)
Methylases [Bacillus anthracis A2012] [Bacillus
anthracis str. A2012]
Length = 291
Score = 144 bits (363), Expect = 1e-33
Identities = 81/238 (34%), Positives = 135/238 (56%), Gaps = 23/238 (9%)
Query: 1 MLYFLPTPIGNLADITLRALEVLERCEVFLCEDTRVSKRLLHLLA-QNPIISHSFPNIAT 59
+LY +PTPIGNL D+T RA+ +L+ ++ EDTR +K+L + + P++S
Sbjct: 14 VLYLVPTPIGNLEDMTFRAIRILKEADLIAAEDTRQTKKLCNYFEIETPVMS-------- 65
Query: 60 KKREFIAFHSHNDQEFLNQIKPSFFD-KEIAVMSDAGMPSLSDPGMSLAAYALKHNIQYD 118
+H HN + +I + K +A++SDAGMP +SDPG + A+
Sbjct: 66 -------YHEHNKEVSGKKILEKLDEGKTVALVSDAGMPCISDPGYDIVVEAVAEQYHVI 118
Query: 119 VLPGANALTTAFCASGFLEGRFFYAGFLPHKSKERRLKIAKILNALAYLEEKTPVVFYES 178
LPGANA TA ASG +F++ GFL KER++++ K L Y++ T ++FYE+
Sbjct: 119 PLPGANAALTALIASGLQTKQFYFYGFLQRNKKERKMELEK----LRYVQ--TTMMFYEA 172
Query: 179 PHRLLETLKDLNDLAKGMHLFAAKELTKLHQQYYLGEVSQIIERLQQSTIQGEWVLVL 236
PHRL +TL + ++ + +ELTK +++ G V + IE +Q+ ++GE+ +++
Sbjct: 173 PHRLDDTLISMQEVLGNREIVLCRELTKKFEEFIRGTVEEAIEWTKQNEVRGEFCILV 230
>ref|NP_463700.1| (NC_003210) conserved hypothetical protein [Listeria monocytogenes
EGD-e]
emb|CAC98382.1| (AL591973) conserved hypothetical protein [Listeria monocytogenes]
Length = 293
Score = 142 bits (359), Expect = 3e-33
Identities = 99/272 (36%), Positives = 140/272 (51%), Gaps = 24/272 (8%)
Query: 2 LYFLPTPIGNLADITLRALEVLERCEVFLCEDTRVSKRLLHLLAQNPIISHSFPNIATKK 61
LY +PTPIGNL D+T RA+ +L+ ++ EDTR + +LL+ I T+
Sbjct: 16 LYLVPTPIGNLEDMTFRAIRMLKEADIIAAEDTRNTVKLLNHF-----------EITTRM 64
Query: 62 REFIAFHSHNDQEFLNQIKPSFFDKEIAVMSDAGMPSLSDPGMSLAAYALKHNIQYDVLP 121
+ F N ++ N I+ + +A++SDAGMPS+SDPG L AL NI LP
Sbjct: 65 TSYHQFTKENKED--NIIQRMLGGEVVALVSDAGMPSISDPGYELVQSALDANIPVIPLP 122
Query: 122 GANALTTAFCASGFLEGRFFYAGFLPHKSKERRLKIAKILNALAYLEEKTPVVFYESPHR 181
GANA TA ASG F++ GFLP ++KER I K LA EE + YESPHR
Sbjct: 123 GANAALTALIASGLAPQPFYFYGFLPRQNKERTQAIEK----LAAREETW--ILYESPHR 176
Query: 182 LLETLKDLNDL-AKGMHLFAAKELTKLHQQYYLGEVSQIIERLQQSTIQGEWVLVLLNEK 240
L ETLK + + + +ELTK +++ G V + I+GE+ L++ E
Sbjct: 177 LKETLKAIIKITGNDRKIVLCRELTKRFEEFLRGTVEDALNWAMDEEIRGEFCLII--EG 234
Query: 241 KIEPCMGLSALLELDLPPKIKAKIEAVMTQKN 272
P + L +L IK + VM Q+N
Sbjct: 235 NSNPQLAEEQLWWQEL--DIKTHVSTVMEQEN 264
>ref|NP_469555.1| (NC_003212) conserved hypothetical protein [Listeria innocua]
emb|CAC95443.1| (AL596163) conserved hypothetical protein [Listeria innocua]
Length = 293
Score = 141 bits (355), Expect = 9e-33
Identities = 97/272 (35%), Positives = 140/272 (50%), Gaps = 24/272 (8%)
Query: 2 LYFLPTPIGNLADITLRALEVLERCEVFLCEDTRVSKRLLHLLAQNPIISHSFPNIATKK 61
LY +PTPIGNL D+T RA+ +L+ ++ EDTR + +LL+ I T+
Sbjct: 16 LYLVPTPIGNLEDMTFRAIRMLKEADIIAAEDTRNTVKLLNHF-----------EITTRM 64
Query: 62 REFIAFHSHNDQEFLNQIKPSFFDKEIAVMSDAGMPSLSDPGMSLAAYALKHNIQYDVLP 121
+ F N ++ N I+ + +A++SDAGMPS+SDPG L AL NI LP
Sbjct: 65 TSYHQFTKENKED--NIIQRMLDGEVVALVSDAGMPSISDPGYELVQNALNANIPVIPLP 122
Query: 122 GANALTTAFCASGFLEGRFFYAGFLPHKSKERRLKIAKILNALAYLEEKTPVVFYESPHR 181
GANA TA ASG F++ GFLP ++KER I K LA EE + YESPHR
Sbjct: 123 GANAALTALIASGLAPQPFYFYGFLPRQNKERTQAIEK----LAAREETW--ILYESPHR 176
Query: 182 LLETLKDLNDL-AKGMHLFAAKELTKLHQQYYLGEVSQIIERLQQSTIQGEWVLVLLNEK 240
L ETLK + + + +ELTK +++ G V + ++GE+ +++ E
Sbjct: 177 LKETLKAIIKITGNDRKMVLCRELTKRFEEFLRGTVEDALNWATDEEVRGEFCIII--EG 234
Query: 241 KIEPCMGLSALLELDLPPKIKAKIEAVMTQKN 272
P + L +L IK + VM Q+N
Sbjct: 235 NANPPLEEELLWWQEL--DIKTHVSTVMEQEN 264
>ref|NP_441433.1| (NC_000911) hypothetical protein [Synechocystis sp. PCC 6803]
sp|P74038|Y818_SYNY3 Hypothetical protein sll0818
pir||S75552 hypothetical protein sll0818 - Synechocystis sp. (strain PCC 6803)
dbj|BAA18113.1| (D90911) ORF_ID:sll0818~hypothetical protein [Synechocystis sp. PCC
6803]
Length = 279
Score = 140 bits (354), Expect = 1e-32
Identities = 91/242 (37%), Positives = 135/242 (55%), Gaps = 30/242 (12%)
Query: 1 MLYFLPTPIGNLADITLRALEVLERCEVFLCEDTRVSKRLL-HLLAQNPIISHSFPNIAT 59
+LY + TPIGNL D+T RA+E L+ ++ EDTR + +LL H P IS
Sbjct: 3 ILYLVATPIGNLGDMTPRAVETLQTVDLIAAEDTRHTGKLLQHFQITTPQIS-------- 54
Query: 60 KKREFIAFHSHN----DQEFLNQIKPSFFDKEIAVMSDAGMPSLSDPGMSLAAYALKHNI 115
+H HN QE L +++ + IA++SDAG P +SDPG L A + NI
Sbjct: 55 -------YHDHNRHGRTQELLAKLQAG---QNIALVSDAGTPGISDPGQELVAACGEANI 104
Query: 116 QYDVLPGANALTTAFCASGFLEGRFFYAGFLPHKSKERRLKIAKILNALAYLEEKTPVVF 175
+ +PGA AL A +SG RF + GFL K++ R+ ++L +LA +E+ ++
Sbjct: 105 EVIPIPGATALIAALISSGLATDRFVFEGFLSTKNRPRQ----QLLQSLA--QEERTIIL 158
Query: 176 YESPHRLLETLKDLND-LAKGMHLFAAKELTKLHQQYYLGEVSQIIERLQQSTIQGEWVL 234
YE+PHRLL TL DL L + L A+ELTK H+Q++ G + I ++T +GE+ L
Sbjct: 159 YEAPHRLLATLTDLQTFLGQERSLTVARELTKYHEQFWRGTLQTAIAYFTENTPKGEFCL 218
Query: 235 VL 236
V+
Sbjct: 219 VI 220
>ref|NP_325885.1| (NC_002771) conserved hypothetical protein [Mycoplasma pulmonis]
sp|Q98RF5|Y540_MYCPU Hypothetical protein MYPU_0540
emb|CAC13227.1| (AL445563) conserved hypothetical protein [Mycoplasma pulmonis]
Length = 222
Score = 139 bits (350), Expect = 4e-32
Identities = 88/237 (37%), Positives = 137/237 (57%), Gaps = 27/237 (11%)
Query: 2 LYFLPTPIGNLADITLRALEVLERCEVFLCEDTRVSKRLL-HLLAQNPIISHSFPNIATK 60
+Y + TPIGNL+DITLRALE L++ + CEDTRVSK LL H P+ S
Sbjct: 4 IYIVGTPIGNLSDITLRALETLKKVDYIACEDTRVSKILLNHYQINKPLFS--------- 54
Query: 61 KREFIAFHSHNDQEFLNQI-KPSFFDKEIAVMSDAGMPSLSDPGMSLAAYALKHNIQYDV 119
+H N++ LN I + ++A++SD+GMP +SDPG L A K NI +V
Sbjct: 55 ------YHKFNEKSKLNYIFELVESGSDVALISDSGMPVISDPGFLLIREAKKKNIDLEV 108
Query: 120 LPGANALTTAFCASGFLEGRFFYAGFLPHKSKERRLKIAKILNALAYLEEKTPVVFYESP 179
+PG +A + AF S F F + GFL K+ +R+ ++ K+ ++Y+ Y S
Sbjct: 109 IPGVSAFSMAFVKSSF-PLPFSFLGFLNDKTGKRKNELKKLSAGISYIS-------YVSK 160
Query: 180 HRLLETLKDLNDL-AKGMHLFAAKELTKLHQQYYLGEVSQIIERLQQSTIQGEWVLV 235
++L++TLKDL ++ + +F +ELTK + Y G + +II++L +S I+GE+ L+
Sbjct: 161 YKLIQTLKDLKEVFGLNVEVFLTRELTKKFENDYTGTIDEIIDQLGES-IKGEFTLI 216
>ref|NP_387917.1| (NC_000964) similar to hypothetical proteins [Bacillus subtilis]
sp|P37544|YABC_BACSU Hypothetical protein yabC
pir||S66065 conserved hypothetical protein yabC - Bacillus subtilis
dbj|BAA05271.1| (D26185) unknown [Bacillus subtilis]
emb|CAB11812.1| (Z99104) similar to hypothetical proteins [Bacillus subtilis]
Length = 292
Score = 139 bits (350), Expect = 4e-32
Identities = 84/238 (35%), Positives = 132/238 (55%), Gaps = 23/238 (9%)
Query: 1 MLYFLPTPIGNLADITLRALEVLERCEVFLCEDTRVSKRLLHLLA-QNPIISHSFPNIAT 59
+LY +PTPIGNL D+T RA++ L+ + EDTR +K+L H+ + P++S
Sbjct: 16 ILYLVPTPIGNLEDMTFRAIDTLKSVDAIAAEDTRQTKKLCHVYEIETPLVS-------- 67
Query: 60 KKREFIAFHSHNDQEFLNQIKPSFFD-KEIAVMSDAGMPSLSDPGMSLAAYALKHNIQYD 118
+H HN + ++I K IA++SDAG+P++SDPG +
Sbjct: 68 -------YHEHNKESSGHKIIEWLKSGKNIALVSDAGLPTISDPGAEIVKDFTDIGGYVV 120
Query: 119 VLPGANALTTAFCASGFLEGRFFYAGFLPHKSKERRLKIAKILNALAYLEEKTPVVFYES 178
LPGANA TA ASG + FF+ GFL + KE++ K L AL +E ++FYE+
Sbjct: 121 PLPGANAALTALIASGIVPQPFFFYGFLNRQKKEKK----KELEALKKRQET--IIFYEA 174
Query: 179 PHRLLETLKDLNDLAKGMHLFAAKELTKLHQQYYLGEVSQIIERLQQSTIQGEWVLVL 236
PHRL ETL + ++ + +ELTK ++++ G +S++I + I+GE+ LV+
Sbjct: 175 PHRLKETLSAMAEILGDREIAVTRELTKKYEEFIRGTISEVIGWANEDQIRGEFCLVV 232
>ref|NP_371013.1| (NC_002758) conserved hypothetical protein [Staphylococcus aureus
subsp. aureus Mu50]
ref|NP_373699.1| (NC_002745) conserved hypothetical protein [Staphylococcus aureus
subsp. aureus N315]
ref|NP_645261.1| (NC_003923) conserved hypothetical protein [Staphylococcus aureus
subsp. aureus MW2]
dbj|BAB41677.1| (AP003130) conserved hypothetical protein [Staphylococcus aureus
subsp. aureus N315]
dbj|BAB56651.1| (AP003359) conserved hypothetical protein [Staphylococcus aureus
subsp. aureus Mu50]
dbj|BAB94309.1| (AP004823) conserved hypothetical protein [Staphylococcus aureus
subsp. aureus MW2]
Length = 279
Score = 138 bits (348), Expect = 6e-32
Identities = 85/244 (34%), Positives = 135/244 (54%), Gaps = 25/244 (10%)
Query: 1 MLYFLPTPIGNLADITLRALEVLERCEVFLCEDTRVSKRLL-HLLAQNPIISHSFPNIAT 59
+LY + TPIGNLADIT RA++VL+R ++ CEDTRV+ +L H P+ S
Sbjct: 3 VLYLVGTPIGNLADITYRAVDVLKRVDMIACEDTRVTSKLCNHYDIPTPLKS-------- 54
Query: 60 KKREFIAFHSHN-DQEFLNQIKPSFFDKEIAVMSDAGMPSLSDPGMSLAAYALKHNIQYD 118
+H HN D++ I+ ++A++SDAG+P +SDPG L A + NI+ +
Sbjct: 55 -------YHEHNKDKQTAFIIEQLELGLDVALVSDAGLPLISDPGYELVVAAREANIKVE 107
Query: 119 VLPGANALTTAFCASGFLEGRFFYAGFLPHKSKERRLKIAKILNALAYLEEKTPVVFYES 178
+PG NA TA ASG + + GFLP K KE+ + + + E + ++ YES
Sbjct: 108 TVPGPNAGLTALMASGLPSYVYTFLGFLPRKEKEKSAVLEQ------RMHENSTLIIYES 161
Query: 179 PHRLLETLKDLNDLAKGMHLFAAKELTKLHQQYYLGEVSQIIERLQQSTI--QGEWVLVL 236
PHR+ +TLK + + + +ELTK +Q +V+Q+ +QQ + +GE+V+++
Sbjct: 162 PHRVTDTLKTIAKIDATRQVSLGRELTKKFEQIVTDDVTQLQALIQQGDVPLKGEFVILI 221
Query: 237 LNEK 240
K
Sbjct: 222 EGAK 225
>ref|NP_604101.1| (NC_003454) Methyltransferase [Fusobacterium nucleatum subsp.
nucleatum ATCC 25586]
gb|AAL95400.1| (AE010626) Methyltransferase [Fusobacterium nucleatum subsp.
nucleatum ATCC 25586]
Length = 235
Score = 138 bits (348), Expect = 6e-32
Identities = 86/242 (35%), Positives = 139/242 (56%), Gaps = 21/242 (8%)
Query: 1 MLYFLPTPIGNLADITLRALEVLERCEVFLCEDTRVSKRLL-HLLAQNPIISHSFPNIAT 59
MLY + TPIGNL D+T RA+ L+ + EDTRV+K+LL H ++ + + + T
Sbjct: 1 MLYIVATPIGNLEDMTFRAIRTLKEVDYIFAEDTRVTKKLLDHYEIKSTVYRY---DEHT 57
Query: 60 KKREFIAFHSHNDQEFLNQIKPSFFDKEIAVMSDAGMPSLSDPGMSLAAYALKHNIQYDV 119
K+ H +N +K +K IA+++DAG P +SDPG + A K+NI+
Sbjct: 58 KQ--------HQIANIINLLKE---EKNIALVTDAGTPCISDPGYEVVDEAHKNNIKVVA 106
Query: 120 LPGANALTTAFCASGFLEGRFFYAGFLPHKSKERRLKIAKILNALAYLEEKTPVVFYESP 179
+PG +ALT + +G RF + GFLP K + L L LA +E+T +V YESP
Sbjct: 107 IPGTSALTASASIAGISMRRFCFEGFLPKKKGRQTL-----LKQLAEEKERT-IVIYESP 160
Query: 180 HRLLETLKDLNDLAKGMHLFAAKELTKLHQQYYLGEVSQIIERLQQSTIQGEWVLVLLNE 239
R+ +TLKD+ + +E+TK++++ G S++IE+L+++ I+GE VL++ +
Sbjct: 161 FRIEKTLKDIETFMGKRDVVIVREITKIYEEVLRGSTSELIEKLEKNPIKGEIVLLIEPQ 220
Query: 240 KK 241
+K
Sbjct: 221 QK 222
>ref|NP_360795.1| (NC_003103) unknown [Rickettsia conorii]
gb|AAL03696.1| (AE008664) unknown [Rickettsia conorii]
Length = 281
Score = 138 bits (348), Expect = 6e-32
Identities = 88/280 (31%), Positives = 146/280 (51%), Gaps = 20/280 (7%)
Query: 2 LYFLPTPIGNLADITLRALEVLERCEVFLCEDTRVSKRLLHLLAQNPIISHSFPNIATKK 61
LY + TPIGN ADITLRA+ L+ ++ LCEDTR+S++LL + +I TK
Sbjct: 10 LYIVSTPIGNFADITLRAISTLKNSDIILCEDTRISQKLL-----------AKHDIHTKL 58
Query: 62 REFIAFHSHNDQEFLNQIKPSFFDKEIAVMSDAGMPSLSDPGMSLAAYALKHNIQYDVLP 121
+ + D+E + + S I+++SDAG P +SDPG L N DV+P
Sbjct: 59 QIYNDHSDEKDRENIISLIKS--GNIISLISDAGTPLISDPGYKLVRGIRNLNCHIDVVP 116
Query: 122 GANALTTAFCASGFLEGRFFYAGFLPHKSKERRLKIAKILNALAYLEEKTPVVFYESPHR 181
G +A TA S RF + GFLP + ++ ++++N K ++F+E+ R
Sbjct: 117 GVSAPVTALTLSALPTDRFLFHGFLPKTIESKKKIFSELVNL------KATLIFFETAPR 170
Query: 182 LLETLKDLNDLAKGMHLFAAKELTKLHQQYYLGEVSQIIERLQQSTIQGEWVLVLL-NEK 240
L+ TL ++ + A+ELTKL+Q+ G++ +IIE Q + ++GE VL++ N +
Sbjct: 171 LINTLSVAKEILGNREICVARELTKLYQEIKTGDIDEIIEFYQNNILKGEIVLLISGNIQ 230
Query: 241 KIEPCMGLSALLELDLPPKIKAKIEAVMTQKNAKELYFQR 280
+ L +EL L + +K + K++Y ++
Sbjct: 231 EQNQHKNLEKFIELCLSKNLSSKTTTELVYDKFKDVYSKK 270
>ref|NP_407004.1| (NC_003143) putative tetrapyrrole methylase [Yersinia pestis]
emb|CAC92776.1| (AJ414157) putative tetrapyrrole methylase [Yersinia pestis]
Length = 299
Score = 137 bits (344), Expect = 2e-31
Identities = 101/288 (35%), Positives = 149/288 (51%), Gaps = 32/288 (11%)
Query: 2 LYFLPTPIGNLADITLRALEVLERCEVFLCEDTRVSKRLLHLLAQNPIISHSFPNIATKK 61
LY +PTPIGNL DIT RALEVL+ ++ EDTR + LL A N
Sbjct: 14 LYVVPTPIGNLGDITHRALEVLKGVDLIAAEDTRHTGLLLQHFAINA------------- 60
Query: 62 REFIAFHSHNDQEFLNQIKPSFFD-KEIAVMSDAGMPSLSDPGMSLAAYALKHNIQYDVL 120
A H HN+Q+ +Q+ + + IA++SDAG P ++DPG L + I+ L
Sbjct: 61 -RLFALHDHNEQQKADQLLAKLQEGQSIALVSDAGTPLINDPGYHLVRRCREAGIRVVPL 119
Query: 121 PGANALTTAFCASGFLEGRFFYAGFLPHKSKERRLKIAKILNALAYLEEKTPVVFYESPH 180
PGA A TA A+G RF Y GFLP K+K R+ + A +EE ++FYES H
Sbjct: 120 PGACAAITALSAAGLASDRFCYEGFLPAKTKGRKDTLQ------ALIEEPRTLIFYESTH 173
Query: 181 RLLETLKDL-NDLAKGMHLFAAKELTKLHQQYYLGEVSQIIE--RLQQSTIQGEWVLVLL 237
RLLE+L+D+ L ++ A+ELTK + + V +++ + +++ +GE VL++
Sbjct: 174 RLLESLQDMVTVLGPQRYVVLARELTKTWESIHGAPVGELLAWVKEEETRRRGEMVLIVE 233
Query: 238 NEKKIE------PCMGLSALLELDLPPKIKAKIEAVM--TQKNAKELY 277
K + ALL+ +LP K A + A + +KNA Y
Sbjct: 234 GHKVQSDDALPADALRTLALLQKELPLKKAAALAAEIHGVKKNALYKY 281
>ref|NP_275076.1| (NC_003112) conserved hypothetical protein [Neisseria meningitidis
MC58]
sp|Q9JXE3|YK88_NEIMB Hypothetical protein NMB2088
pir||F81007 conserved hypothetical protein NMB2088 [imported] - Neisseria
meningitidis (group B strain MD58)
gb|AAF42405.1| (AE002558) conserved hypothetical protein [Neisseria meningitidis
MC58]
Length = 291
Score = 136 bits (342), Expect = 3e-31
Identities = 94/285 (32%), Positives = 144/285 (49%), Gaps = 29/285 (10%)
Query: 2 LYFLPTPIGNLADITLRALEVLERCEVFLCEDTRVSKRLLHLLAQNPIISHSFPNIATKK 61
LY + TPIGNLADITLRAL VL++ ++ EDTRV+ +LL +
Sbjct: 18 LYVVATPIGNLADITLRALAVLQKADIICAEDTRVTAQLLSAYG--------------IQ 63
Query: 62 REFIAFHSHNDQEFLNQIKPSFFD-KEIAVMSDAGMPSLSDPGMSLAAYALKHNIQYDVL 120
+ ++ HN+++ ++I D +A +SDAG P++ DPG LA + + +
Sbjct: 64 GKLVSVREHNERQMADKIVGYLSDGMVVAQVSDAGTPAVCDPGAKLARRVREAGFKVVPV 123
Query: 121 PGANALTTAFCASGFLEGRFFYAGFLPHKSKERRLKIAKILNALAYLEEKTPVVFYESPH 180
GA+A+ A +G F++ GF+P KS ERR AK ++ P+V +E+PH
Sbjct: 124 VGASAVMAALSVAGVEGSDFYFNGFVPPKSGERRKLFAK------WVRAAFPIVMFETPH 177
Query: 181 RLLETLKDLNDLAKGMHLFAAKELTKLHQQYYLGEVSQIIERLQQSTIQ--GEWVLVLL- 237
R+ TL D+ +L L A+E+TK + + G V +I L Q GE VLVL
Sbjct: 178 RIGATLADMAELFPERRLMLAREITKTFETFLSGTVGEIQTALSADGNQSRGEMVLVLYP 237
Query: 238 -----NEKKIEPCMGLSALLELDLPPKIKAKIEAVMTQKNAKELY 277
+E E + +L +LP K A++ A +T + K LY
Sbjct: 238 AQDEKHEGLSESAQNIMKILTAELPTKQAAELAAKITGEGKKALY 282
>ref|NP_283174.1| (NC_003116) hypothetical protein NMA0342 [Neisseria meningitidis
Z2491]
sp|Q9JWJ7|Y342_NEIMA Hypothetical protein NMA0342
pir||B82030 hypothetical protein NMA0342 [imported] - Neisseria meningitidis
(group A strain Z2491)
emb|CAB83645.1| (AL162752) hypothetical protein NMA0342 [Neisseria meningitidis
Z2491]
Length = 291
Score = 136 bits (342), Expect = 3e-31
Identities = 95/285 (33%), Positives = 144/285 (50%), Gaps = 29/285 (10%)
Query: 2 LYFLPTPIGNLADITLRALEVLERCEVFLCEDTRVSKRLLHLLAQNPIISHSFPNIATKK 61
LY + TPIGNLADITLRAL VL++ ++ EDTRV+ +LL +
Sbjct: 18 LYVVATPIGNLADITLRALAVLQKADIICAEDTRVTAQLLSAYG--------------IQ 63
Query: 62 REFIAFHSHNDQEFLNQIKPSFFD-KEIAVMSDAGMPSLSDPGMSLAAYALKHNIQYDVL 120
+ ++ HN+++ ++I D +A +SDAG P++ DPG LA + + +
Sbjct: 64 GKLVSVREHNERQMADKIVGYLSDGMVVAQVSDAGTPAVCDPGAKLARRVREVGFKVVPV 123
Query: 121 PGANALTTAFCASGFLEGRFFYAGFLPHKSKERRLKIAKILNALAYLEEKTPVVFYESPH 180
GA+A+ A +G F++ GF+P KS ERR AK ++ PVV +E+PH
Sbjct: 124 VGASAVMAALSVAGVAGSDFYFNGFVPPKSGERRKLFAK------WVRVAFPVVMFETPH 177
Query: 181 RLLETLKDLNDLAKGMHLFAAKELTKLHQQYYLGEVSQIIERLQQSTIQ--GEWVLVLL- 237
R+ TL D+ +L L A+E+TK + + G V +I L Q GE VLVL
Sbjct: 178 RIGATLADMAELFPERRLMLAREITKTFETFLSGTVGEIQTALAADGNQSRGEMVLVLYP 237
Query: 238 -----NEKKIEPCMGLSALLELDLPPKIKAKIEAVMTQKNAKELY 277
+E E + +L +LP K A++ A +T + K LY
Sbjct: 238 AQDEKHEGLSESAQNIMKILTAELPTKQAAELAAKITGEGKKALY 282
>ref|NP_239924.1| (NC_002528) hypotheical protein [Buchnera sp. APS]
sp|P57192|Y091_BUCAI Hypothetical protein BU091
dbj|BAB12810.1| (AP001118) hypotheical protein [Buchnera sp. APS]
Length = 282
Score = 136 bits (342), Expect = 3e-31
Identities = 92/247 (37%), Positives = 144/247 (58%), Gaps = 24/247 (9%)
Query: 1 MLYFLPTPIGNLADITLRALEVLERCEVFLCEDTRVSKRLL-HLLAQNPIISHSFPNIAT 59
+LY +PTPIGNL+DIT RALEVL+ ++ E+ R + LL H +N +I + N
Sbjct: 8 ILYIVPTPIGNLSDITYRALEVLKDVDIIAAENIRHTNILLQHFNIKNNLILMNKDN--- 64
Query: 60 KKREFIAFHSHNDQEFLNQIKPSFFDKEIAVMSDAGMPSLSDPGMSLAAYALKHNIQYDV 119
+K++ SHN + ++K K+IA++S+AG P ++DPG L +I+
Sbjct: 65 EKKQ-----SHN---LIQELKKG---KKIALVSNAGTPIINDPGCILIKQCHIFDIKVIP 113
Query: 120 LPGANALTTAFCASGFLEGRFFYAGFLPHKSKERRLKIAKILNALAYLEEKTPVVFYESP 179
LPGA A TA ASG + RF Y GFLP + K R +L++L EE ++FYES
Sbjct: 114 LPGACAAITALSASGIINNRFCYEGFLPSRKKSR----CDLLHSLK--EETRTIIFYESK 167
Query: 180 HRLLETLKD-LNDLAKGMHLFAAKELTKLHQQYYLGEVSQIIERLQQS--TIQGEWVLVL 236
HR+LE++KD + + K H+ A+E+TK + Y + S I+E L+++ +GE V+++
Sbjct: 168 HRILESIKDIIEQIDKNRHIVIAREMTKKWESIYGAKASLILEWLKENKYRYKGEMVIII 227
Query: 237 LNEKKIE 243
KK++
Sbjct: 228 DGFKKLK 234
>gb|AAD25734.1|AF100324_2 (AF100324) YabC protein [Mycoplasma fermentans]
Length = 236
Score = 135 bits (341), Expect = 4e-31
Identities = 90/248 (36%), Positives = 137/248 (54%), Gaps = 30/248 (12%)
Query: 2 LYFLPTPIGNLADITLRALEVLERCEVFLCEDTRVSKRLLHLLAQNPIISHSFPNIATKK 61
+Y + TPIGNL DITLRALE L+ +V CEDTRVS +LL N K
Sbjct: 4 IYIVGTPIGNLKDITLRALETLKAVDVIACEDTRVSAKLL--------------NHYDIK 49
Query: 62 REFIAFHSHND----QEFLNQIKPSFFDKEIAVMSDAGMPSLSDPGMSLAAYALKHNIQY 117
+ I+++ N+ Q ++ I+ D ++A++SDAGMP +SDPG L A + NI+
Sbjct: 50 KRLISYNKINEKASAQGLIDLIEKD--DLKMALISDAGMPLVSDPGFELIKQAREKNIEL 107
Query: 118 DVLPGANALTTAFCASGFLEGRFFYAGFLPHKSKERRLKIAKILNALAYLEEKTPVVFYE 177
+++PG NA +AF SG L F + F KS +R ++ + AY VFY
Sbjct: 108 ELIPGVNAAISAFAFSG-LSNTFIFMTFPKEKSGQRLEQVKSFTSEHAY-------VFYV 159
Query: 178 SPHRLLETLKDLNDL-AKGMHLFAAKELTKLHQQYYLGEVSQIIERLQQSTIQGEWVLVL 236
+PH+L LKD++ + LF A+ELTK+H+++ ++++ + + S +GE LV+
Sbjct: 160 APHKLESFLKDIDSVWGNQAQLFMARELTKIHEEFIYATATELLAKNKTSPFKGEITLVI 219
Query: 237 -LNEKKIE 243
L E K E
Sbjct: 220 KLKEIKKE 227
>ref|NP_439796.1| (NC_000907) conserved hypothetical protein [Haemophilus influenzae
Rd]
sp|P45298|YRAL_HAEIN Hypothetical protein HI1654
pir||A64174 hypothetical protein HI1654 - Haemophilus influenzae (strain Rd
KW20)
gb|AAC23298.1| (U32838) conserved hypothetical protein [Haemophilus influenzae Rd]
Length = 283
Score = 135 bits (341), Expect = 4e-31
Identities = 104/291 (35%), Positives = 146/291 (49%), Gaps = 37/291 (12%)
Query: 1 MLYFLPTPIGNLADITLRALEVLERCEVFLCEDTRVSKRLLHLLAQNPIISHSFPNIATK 60
+LY + TPIGNL DIT RALE + ++ EDTR S LL SH
Sbjct: 7 ILYIVATPIGNLQDITQRALETFAQVDLIAAEDTRHSGLLL---------SHY-----GI 52
Query: 61 KREFIAFHSHNDQE----FLNQIKPSFFDKEIAVMSDAGMPSLSDPGMSLAAYALKHNIQ 116
K+ F A H HN+QE + ++K IA++SDAG P +SDPG L + I+
Sbjct: 53 KKPFFALHDHNEQEKAHILVEKLKQG---SNIALISDAGTPLISDPGFHLVRQCREAGIR 109
Query: 117 YDVLPGANALTTAFCASGFLEGRFFYAGFLPHKSKERRLKIAKILNALAYLEEKTPVVFY 176
LPGA A TA CASG RF + GFLP KSK R+ K+ I EE ++FY
Sbjct: 110 VVPLPGACAAITALCASGIASDRFCFEGFLPAKSKARKDKLENI------AEEDRTLIFY 163
Query: 177 ESPHRLLETLKDLND-LAKGMHLFAAKELTKLHQQYYLGEVSQIIERLQQ--STIQGEWV 233
ES HR+L+TL+D+ L + ++ A+E+TK + + + E L + + +GE V
Sbjct: 164 ESTHRILDTLEDMQAVLGEERYIVLAREMTKTWETITGNTIKNLREWLLEDPNRTKGEMV 223
Query: 234 LVLL------NEKKIEP-CMGLSALLELDLPPKIKAKIEAVMTQKNAKELY 277
L++ N +I P + L+ +LP K A I A + LY
Sbjct: 224 LIVEGKPKSDNNDEISPQAVKALELIAEELPLKKAAAIVAELYGYKKNALY 274
>ref|NP_268717.1| (NC_002737) conserved hypothetical protein [Streptococcus pyogenes]
[Streptococcus pyogenes M1 GAS]
sp|Q9A186|Y406_STRPY Hypothetical protein SPy0406
gb|AAK33438.1| (AE006502) conserved hypothetical protein [Streptococcus pyogenes
M1 GAS]
Length = 287
Score = 135 bits (339), Expect = 7e-31
Identities = 96/292 (32%), Positives = 152/292 (51%), Gaps = 38/292 (13%)
Query: 2 LYFLPTPIGNLADITLRALEVLERCEVFLCEDTRVSKRLLHLLAQNPIISHSFPNIATKK 61
LY +PTPIGNL D+T RA+ L+ + EDTR + LL +IATK+
Sbjct: 16 LYLVPTPIGNLQDMTFRAVATLKEVDFICAEDTRNTGLLLKHF-----------DIATKQ 64
Query: 62 REFIAFHSHNDQEFLNQIKPSFFD-KEIAVMSDAGMPSLSDPGMSLAAYALKHNIQYDVL 120
I+FH HN E + + + +A +SDAGMPS+SDPG L A+ +I L
Sbjct: 65 ---ISFHEHNAYEKIPDLIDLLISGRSLAQVSDAGMPSISDPGHDLVKAAIDSDIAVVAL 121
Query: 121 PGANALTTAFCASGFLEGRFFYAGFLPHKSKERRLKIAKILNALAYLEEK----TPVVFY 176
PGA+A TA ASG + GFLP K+ +++ A+ E+K +FY
Sbjct: 122 PGASAGITALIASGLAPQPHVFYGFLPRKAGQQK----------AFFEDKHHYPETQMFY 171
Query: 177 ESPHRLLETLKDLNDLAKGMHLFAAKELTKLHQQYYLGEVSQIIERLQQSTIQGEWVLVL 236
ESP+R+ +TL ++ + +ELTKL ++Y G +S+I+ L+++ ++GE +L++
Sbjct: 172 ESPYRIKDTLTNMLACYGDRQVVLVRELTKLFEEYQRGSISEILSYLEETPLKGECLLIV 231
Query: 237 L-----NEKKIEPCMGLSALLELDL----PPKIKAKIEAVMTQKNAKELYFQ 279
+E ++ + L +L++ ++ P K A Q N +ELY Q
Sbjct: 232 AGAQADSEVELTADVDLVSLVQKEIQAGAKPNQAIKTIAKAYQVNRQELYQQ 283
>emb|CAA10788.1| (AJ132803) hypothetical protein [Staphylococcus aureus]
Length = 217
Score = 134 bits (338), Expect = 9e-31
Identities = 81/230 (35%), Positives = 126/230 (54%), Gaps = 23/230 (10%)
Query: 1 MLYFLPTPIGNLADITLRALEVLERCEVFLCEDTRVSKRLL-HLLAQNPIISHSFPNIAT 59
+LY + TPIGNLADIT RA++VL+R ++ CEDTRV+ +L H P+ S
Sbjct: 3 VLYLVGTPIGNLADITYRAVDVLKRVDMIACEDTRVTSKLCNHYDIPTPLKS-------- 54
Query: 60 KKREFIAFHSHN-DQEFLNQIKPSFFDKEIAVMSDAGMPSLSDPGMSLAAYALKHNIQYD 118
+H HN D++ I+ ++A++SDAG+P +SDPG L A + NI+ +
Sbjct: 55 -------YHEHNKDKQTAFIIEQLELGLDVALVSDAGLPLISDPGYELVVAAREANIKVE 107
Query: 119 VLPGANALTTAFCASGFLEGRFFYAGFLPHKSKERRLKIAKILNALAYLEEKTPVVFYES 178
+PG NA TA ASG + + GFLP K KE+ + + + E + ++ YES
Sbjct: 108 TVPGPNAGLTALMASGLPSYVYTFLGFLPRKEKEKSAVLEQ------RMHENSTLIIYES 161
Query: 179 PHRLLETLKDLNDLAKGMHLFAAKELTKLHQQYYLGEVSQIIERLQQSTI 228
PHR+ +TLK + + + +ELTK +Q +V+Q+ +QQ +
Sbjct: 162 PHRVTDTLKTIAKIDATRQVSLGRELTKKFEQIVTDDVTQLQALIQQGDV 211
>ref|NP_289722.1| (NC_002655) orf, hypothetical protein [Escherichia coli O157:H7
EDL933]
ref|NP_312054.1| (NC_002695) hypothetical protein [Escherichia coli O157:H7]
ref|NP_417615.1| (NC_000913) orf, hypothetical protein [Escherichia coli K12]
sp|P45528|YRAL_ECOLI Hypothetical protein yraL
pir||F65104 hypothetical 31.3 kD protein in agai-mtr intergenic region -
Escherichia coli (strain K-12)
gb|AAA57949.1| (U18997) ORF_f286 [Escherichia coli]
gb|AAC76180.1| (AE000395) orf, hypothetical protein [Escherichia coli K12]
gb|AAG58282.1|AE005543_12 (AE005543) orf, hypothetical protein [Escherichia coli O157:H7
EDL933]
dbj|BAB37450.1| (AP002564) hypothetical protein [Escherichia coli O157:H7]
Length = 286
Score = 134 bits (338), Expect = 9e-31
Identities = 102/288 (35%), Positives = 148/288 (50%), Gaps = 33/288 (11%)
Query: 2 LYFLPTPIGNLADITLRALEVLERCEVFLCEDTRVSKRLLHLLAQNPIISHSFPNIATKK 61
LY +PTPIGNLADIT RALEVL+ ++ EDTR + LL N
Sbjct: 14 LYIVPTPIGNLADITQRALEVLQAVDLIAAEDTRHTGLLLQHFGINA------------- 60
Query: 62 REFIAFHSHNDQEFLNQIKPSFFD-KEIAVMSDAGMPSLSDPGMSLAAYALKHNIQYDVL 120
A H HN+Q+ + + + IA++SDAG P ++DPG L + I+ L
Sbjct: 61 -RLFALHDHNEQQKAETLLAKLQEGQNIALVSDAGTPLINDPGYHLVRTCREAGIRVVPL 119
Query: 121 PGANALTTAFCASGFLEGRFFYAGFLPHKSKERRLKIAKILNALAYLE-EKTPVVFYESP 179
PG A TA A+G RF Y GFLP KSK RR +AL +E E ++FYES
Sbjct: 120 PGPCAAITALSAAGLPSDRFCYEGFLPAKSKGRR-------DALKAIEAEPRTLIFYEST 172
Query: 180 HRLLETLKDL-NDLAKGMHLFAAKELTKLHQQYYLGEVSQIIE--RLQQSTIQGEWVLVL 236
HRLL++L+D+ L + ++ A+ELTK + + V +++ + ++ +GE VL++
Sbjct: 173 HRLLDSLEDIVAVLGESRYVVLARELTKTWETIHGAPVGELLAWVKEDENRRKGEMVLIV 232
Query: 237 LNEKKIE-----PCMGLSALLELDLPPKIKAKIEAVM--TQKNAKELY 277
K E + ALL+ +LP K A + A + +KNA Y
Sbjct: 233 EGHKAQEEDLPADALRTLALLQAELPLKKAAALAAEIHGVKKNALYKY 280
>ref|NP_072718.1| (NC_000908) conserved hypothetical protein [Mycoplasma genitalium]
sp|P47302|Y056_MYCGE Hypothetical protein MG056
pir||B64206 hypothetical protein homolog MG056 - Mycoplasma genitalium
gb|AAC71273.1| (U39685) conserved hypothetical protein [Mycoplasma genitalium]
Length = 277
Score = 134 bits (337), Expect = 1e-30
Identities = 79/240 (32%), Positives = 135/240 (55%), Gaps = 21/240 (8%)
Query: 2 LYFLPTPIGNLADITLRALEVLERCEVFLCEDTRVSKRLLHLLAQNPIISHSFPNIATKK 61
L + TPIGN+ +I+ RA + L+ CEV CED+RV++++L LL NI K+
Sbjct: 4 LKVVATPIGNIQEISERAKKALQDCEVLFCEDSRVTRKMLDLL-----------NIDCKQ 52
Query: 62 REFIAFHSHNDQEFLNQIKPSFFDKEIAVMSDAGMPSLSDPGMSLAAYALKHN--IQYDV 119
++F+ +S +++ L + + + ++SDAG PSLSDPG + + + N I+ +V
Sbjct: 53 KKFVINNSFKEKQNLTFAEEFITNFKCCLVSDAGYPSLSDPGNEMINWIISKNKEIRIEV 112
Query: 120 LPGANALTTAFCASGFLEGRFFYAGFLPHKSKERRLKIAKILNALAYLEEKTPVVFYESP 179
+ G +AL SGF + GFL HK + + ++ Y +K+ +VF+E+
Sbjct: 113 INGPSALMCGLITSGFKTTPLLFLGFLSHKQNQLKNYLS------TYQNQKSTIVFFEAV 166
Query: 180 HRLLETLKDLNDLAKGMHLFAAKELTKLHQQYYLGEVSQIIERLQQSTIQGEWVLVLLNE 239
HRL TL+ + ++ K +F +ELTKLH+ +Y S+ L T++GE+V+V+ N+
Sbjct: 167 HRLENTLETVKNVFKNNDVFIGRELTKLHESHYWFNTSE--NTLPDITLKGEFVIVIDNQ 224
>ref|NP_245582.1| (NC_002663) unknown [Pasteurella multocida]
sp|Q9CN04|Y645_PASMU Hypothetical protein PM0645
gb|AAK02729.1| (AE006100) unknown [Pasteurella multocida]
Length = 281
Score = 132 bits (333), Expect = 3e-30
Identities = 99/287 (34%), Positives = 143/287 (49%), Gaps = 30/287 (10%)
Query: 1 MLYFLPTPIGNLADITLRALEVLERCEVFLCEDTRVSKRLLHLLAQNPIISHSFPNIATK 60
+LY + TPIGNL DIT RAL + E+ ++ EDTR S LL SH
Sbjct: 7 ILYIVATPIGNLQDITQRALAIFEQVDLIAAEDTRHSGLLL---------SHY-----GI 52
Query: 61 KREFIAFHSHNDQEFLNQIKPSFFD-KEIAVMSDAGMPSLSDPGMSLAAYALKHNIQYDV 119
K+ F A H HN+Q+ + + + IA++SDAG P +SDPG L + I+
Sbjct: 53 KKPFFALHDHNEQQKAHLLVEKLQQGQHIALISDAGTPLISDPGFHLVRQCRQAGIKVVP 112
Query: 120 LPGANALTTAFCASGFLEGRFFYAGFLPHKSKERRLKIAKILNALAYLEEKTPVVFYESP 179
+PGA A TA CASG RF + GFLP KSK R K+ + EE+ ++FYES
Sbjct: 113 IPGACAAVTALCASGIASDRFCFEGFLPAKSKARCDKLQNL------AEEERTLIFYEST 166
Query: 180 HRLLETLKDL-NDLAKGMHLFAAKELTKLHQQYYLGEVSQIIERLQQ--STIQGEWVLVL 236
HR+L+TL D+ L ++ A+E+TK + V+ + + L + + +GE VL++
Sbjct: 167 HRILDTLADIEKTLGAERYVVLAREITKTWETIVGDNVANLRQWLGEDPNRTKGEMVLII 226
Query: 237 LNEKKIE------PCMGLSALLELDLPPKIKAKIEAVMTQKNAKELY 277
+ K E + L+ LP K A I A + LY
Sbjct: 227 EGKVKQETDEINPQALKALELISQSLPLKKAAAIVAEIYGYKKNALY 273
>ref|NP_606690.1| (NC_003485) conserved hypothetical protein [Streptococcus pyogenes
MGAS8232]
gb|AAL97189.1| (AE009985) conserved hypothetical protein [Streptococcus pyogenes
MGAS8232]
Length = 287
Score = 132 bits (333), Expect = 3e-30
Identities = 95/292 (32%), Positives = 152/292 (51%), Gaps = 38/292 (13%)
Query: 2 LYFLPTPIGNLADITLRALEVLERCEVFLCEDTRVSKRLLHLLAQNPIISHSFPNIATKK 61
LY +PTPIGNL D+T RA+ L+ + EDTR + LL +IATK+
Sbjct: 16 LYLVPTPIGNLQDMTFRAVATLKEVDFICAEDTRNTGLLLKHF-----------DIATKQ 64
Query: 62 REFIAFHSHNDQEFLNQIKPSFFD-KEIAVMSDAGMPSLSDPGMSLAAYALKHNIQYDVL 120
I+FH HN E + + + +A +SDAGMPS+SDPG L A+ +I L
Sbjct: 65 ---ISFHEHNAYEKIPDLIDLLISGRSLAQVSDAGMPSISDPGHDLVKAAIDSDIAVVAL 121
Query: 121 PGANALTTAFCASGFLEGRFFYAGFLPHKSKERRLKIAKILNALAYLEEK----TPVVFY 176
PGA+A TA ASG + GFL K+ +++ A+ E+K +FY
Sbjct: 122 PGASAGITALIASGLAPQPHVFYGFLSRKAGQQK----------AFFEDKHHYPETQMFY 171
Query: 177 ESPHRLLETLKDLNDLAKGMHLFAAKELTKLHQQYYLGEVSQIIERLQQSTIQGEWVLVL 236
ESP+R+ +TL ++ + +ELTKL ++Y G +S+I+ L++++++GE +L++
Sbjct: 172 ESPYRIKDTLTNMLACYGDRQVVLVRELTKLFEEYQRGSISEILSYLEETSLKGECLLIV 231
Query: 237 L-----NEKKIEPCMGLSALLELDL----PPKIKAKIEAVMTQKNAKELYFQ 279
+E ++ + L +L++ ++ P K A Q N +ELY Q
Sbjct: 232 AGAQVDSEVELTADVDLVSLVQKEIQAGAKPNQAIKTIAKAYQVNRQELYQQ 283
>ref|NP_457647.1| (NC_003198) conserved hypothetical protein [Salmonella enterica
subsp. enterica serovar Typhi]
emb|CAD07785.1| (AL627278) conserved hypothetical protein [Salmonella enterica
subsp. enterica serovar Typhi]
Length = 287
Score = 132 bits (333), Expect = 3e-30
Identities = 99/294 (33%), Positives = 149/294 (50%), Gaps = 31/294 (10%)
Query: 2 LYFLPTPIGNLADITLRALEVLERCEVFLCEDTRVSKRLLHLLAQNPIISHSFPNIATKK 61
L+ +PTPIGNLADIT RALEVL+ ++ EDTR + LL N
Sbjct: 14 LFIVPTPIGNLADITQRALEVLQAVDLIAAEDTRHTGLLLQHFGINA------------- 60
Query: 62 REFIAFHSHNDQEFLNQIKPSFFD-KEIAVMSDAGMPSLSDPGMSLAAYALKHNIQYDVL 120
A H HN+Q+ + + + IA++SDAG P ++DPG L + I+ L
Sbjct: 61 -RLFALHDHNEQQKAETLVAKLKEGQNIALVSDAGTPLINDPGYHLVRTCREAGIRVVPL 119
Query: 121 PGANALTTAFCASGFLEGRFFYAGFLPHKSKERRLKIAKILNALAYLE-EKTPVVFYESP 179
PG A TA A+G RF Y GFLP KSK RR +AL +E E ++FYES
Sbjct: 120 PGPCAAITALSAAGLPSDRFCYEGFLPAKSKGRR-------DALKAIEAEPRTLIFYEST 172
Query: 180 HRLLETLKDLNDL-AKGMHLFAAKELTKLHQQYYLGEVSQIIE--RLQQSTIQGEWVLVL 236
HRLL++L+D+ + + ++ A+ELTK + + V +++ + ++ +GE VL++
Sbjct: 173 HRLLDSLEDMVAVWGESRYVVLARELTKTWETIHGAPVGELLAWVKEDENRRKGEMVLIV 232
Query: 237 LNEKKIE-----PCMGLSALLELDLPPKIKAKIEAVMTQKNAKELYFQRLLEEK 285
K E + ALL+ +LP K A + A + LY L +++
Sbjct: 233 EGHKAQEDDLPADALRTLALLQAELPLKKAAALAAEIHGVKKNALYKYALAQQE 286
>ref|NP_462176.1| (NC_003197) putative methyltransferase [Salmonella typhimurium LT2]
gb|AAL22135.1| (AE008850) putative methyltransferase [Salmonella typhimurium LT2]
Length = 287
Score = 132 bits (331), Expect = 6e-30
Identities = 102/295 (34%), Positives = 149/295 (49%), Gaps = 33/295 (11%)
Query: 2 LYFLPTPIGNLADITLRALEVLERCEVFLCEDTRVSKRLLHLLAQNPIISHSFPNIATKK 61
L+ +PTPIGNLADIT RALEVL+ ++ EDTR + LL N
Sbjct: 14 LFIVPTPIGNLADITQRALEVLQAVDLIAAEDTRHTGLLLQHFGINA------------- 60
Query: 62 REFIAFHSHNDQEFLNQIKPSFFD-KEIAVMSDAGMPSLSDPGMSLAAYALKHNIQYDVL 120
A H HN+Q+ + + + IA++SDAG P ++DPG L + I+ L
Sbjct: 61 -RLFALHDHNEQQKAETLVAKLKEGQNIALVSDAGTPLINDPGYHLVRTCREAGIRVVPL 119
Query: 121 PGANALTTAFCASGFLEGRFFYAGFLPHKSKERRLKIAKILNALAYLE-EKTPVVFYESP 179
PG A A A+G RF Y GFLP KSK RR +AL +E E ++FYES
Sbjct: 120 PGPCAAIAALSAAGLPSDRFCYEGFLPAKSKGRR-------DALKAIETEPRTLIFYEST 172
Query: 180 HRLLETLKDL-NDLAKGMHLFAAKELTKLHQQYYLGEVSQIIE--RLQQSTIQGEWVLVL 236
HRLL++L+D+ L + ++ A+ELTK + + V +++ + ++ +GE VL++
Sbjct: 173 HRLLDSLEDIVAVLGESRYVVLARELTKTWETIHGAPVGELLAWVKEDENRRKGEMVLIV 232
Query: 237 LNEKKIE-----PCMGLSALLELDLPPKIKAKIEAVM--TQKNAKELYFQRLLEE 284
K E + ALL+ +LP K A + A + +KNA Y EE
Sbjct: 233 EGHKAQEDDLPADALRTLALLQAELPLKKAAALAAEIHGVKKNALYKYALEQQEE 287
>ref|NP_221099.1| (NC_000963) unknown [Rickettsia prowazekii]
sp|Q9ZCJ3|Y747_RICPR Hypothetical protein RP747
pir||G71634 hypothetical protein RP747 - Rickettsia prowazekii
emb|CAA15175.1| (AJ235273) unknown [Rickettsia prowazekii]
Length = 280
Score = 130 bits (326), Expect = 2e-29
Identities = 79/280 (28%), Positives = 147/280 (52%), Gaps = 20/280 (7%)
Query: 2 LYFLPTPIGNLADITLRALEVLERCEVFLCEDTRVSKRLLHLLAQNPIISHSFPNIATKK 61
LY + TPIGN DITLRA+ L+ ++ LCEDTR+S++LL + I TK
Sbjct: 7 LYIVSTPIGNFEDITLRAISTLKNSDIILCEDTRISQKLL-----------AKHYIHTKL 55
Query: 62 REFIAFHSHNDQEFLNQIKPSFFDKEIAVMSDAGMPSLSDPGMSLAAYALKHNIQYDVLP 121
+ + + D+E++ + + ++++SDAG P +SDPG L N +V+P
Sbjct: 56 QIYNDHSDYKDREYIISLIKA--GNVVSLISDAGTPLISDPGYKLVRDLRNLNYYIEVVP 113
Query: 122 GANALTTAFCASGFLEGRFFYAGFLPHKSKERRLKIAKILNALAYLEEKTPVVFYESPHR 181
G ++ TA S RF ++GFLP + ++ A+++N K ++F+++ R
Sbjct: 114 GVSSPITALTLSSLPTDRFLFSGFLPKTIESKKKIFAELVNL------KATLIFFDTASR 167
Query: 182 LLETLKDLNDLAKGMHLFAAKELTKLHQQYYLGEVSQIIERLQQSTIQGEWVLVLLNEKK 241
L+ TL ++ + A+ELTK++Q+ G++ +IIE + + ++GE VL++ +
Sbjct: 168 LINTLLLAKEIFGNREICVARELTKIYQETKTGDIDEIIEFYKNNILKGEIVLLISGNVQ 227
Query: 242 IE-PCMGLSALLELDLPPKIKAKIEAVMTQKNAKELYFQR 280
++ + L +E L + +K + K++Y ++
Sbjct: 228 VQNKQINLEKFIEFCLSKNLSSKTIIELAYDKFKDVYSKK 267
>ref|NP_662529.1| (NC_002932) tetrapyrrole methylase family protein [Chlorobium
tepidum TLS]
gb|AAM72871.1| (AE012920) tetrapyrrole methylase family protein [Chlorobium
tepidum TLS]
Length = 243
Score = 129 bits (324), Expect = 4e-29
Identities = 75/236 (31%), Positives = 129/236 (53%), Gaps = 21/236 (8%)
Query: 2 LYFLPTPIGNLADITLRALEVLERCEVFLCEDTRVSKRLLHLLAQNPIISHSFPNIATKK 61
LY + TP+GNL D+T RA+ L CEDTR + LL + +
Sbjct: 11 LYVVATPLGNLDDMTFRAVNTLRNAGAIACEDTRRTSILLK-------------HFGIEG 57
Query: 62 REFIAFHSHNDQEFLNQIKPSFFD-KEIAVMSDAGMPSLSDPGMSLAAYALKHNIQYDVL 120
+ +++HS N++ + Q+ + ++A+++DAG P++SDPG ++A+ A + +
Sbjct: 58 KRLVSYHSFNEERAVRQVIELLEEGSDVALVTDAGTPAISDPGYTMASAAHAAGLPVVPV 117
Query: 121 PGANALTTAFCASGFLEGRFFYAGFLPHKSKERRLKIAKILNALAYLEEKTPVVFYESPH 180
PGA+ALT A FF+AGFLPHK K R+ + L LA ++ + +V YESPH
Sbjct: 118 PGASALTAALSVCPLPSSSFFFAGFLPHK-KGRKSR----LEFLASID--STIVLYESPH 170
Query: 181 RLLETLKDLNDLAKGMHLFAAKELTKLHQQYYLGEVSQIIERLQQSTIQGEWVLVL 236
R+ ++++ + +FAA+E+TK+H++Y G ++ +GE+V+V+
Sbjct: 171 RIGRLMEEVKEHFPDAQVFAAREITKMHEEYVTGTPDELANHFTGQKQRGEFVVVV 226
>ref|NP_230233.1| (NC_002505) conserved hypothetical protein [Vibrio cholerae]
sp|Q9KUD9|Y582_VIBCH Hypothetical protein VC0582
pir||C82306 conserved hypothetical protein VC0582 [imported] - Vibrio cholerae
(group O1 strain N16961)
gb|AAF93750.1| (AE004143) conserved hypothetical protein [Vibrio cholerae]
Length = 288
Score = 129 bits (323), Expect = 5e-29
Identities = 94/287 (32%), Positives = 143/287 (49%), Gaps = 30/287 (10%)
Query: 1 MLYFLPTPIGNLADITLRALEVLERCEVFLCEDTRVSKRLLHLLAQNPIISHSFPNIATK 60
+LY +PTPIGNL DIT RAL+VL ++ EDTR + +LL + NI+TK
Sbjct: 13 ILYIVPTPIGNLGDITQRALDVLASVDMIAVEDTRHTGKLL-----------AHFNISTK 61
Query: 61 KREFIAFHSHNDQEFLNQIKPSFFDK-EIAVMSDAGMPSLSDPGMSLAAYALKHNIQYDV 119
A H HN+Q+ + IA++SDAG P +SDPG L + ++
Sbjct: 62 T---FALHDHNEQQKAQVLVDKLLSGLSIALVSDAGTPLISDPGYHLVTQCRQAGVKVVP 118
Query: 120 LPGANALTTAFCASGFLEGRFFYAGFLPHKSKERRLKIAKILNALAYLEEKTPVVFYESP 179
LPG A+ TA ASG F + GFLP KSK R+ K+ +I +FYESP
Sbjct: 119 LPGPCAVITALSASGLPSDSFSFEGFLPAKSKARKDKLLEIAKV------SRTCIFYESP 172
Query: 180 HRLLETLKDLNDLAKG-MHLFAAKELTKLHQQYYLGEVSQIIERLQQSTIQGEWVLVLL- 237
HR+ E+L+D+ D+ G + A+ELTK + ++++I + + + + +VLL
Sbjct: 173 HRICESLQDMLDVLGGEREVVLARELTKTFETIQGMPLAELITWIAEDDNRKKGEMVLLV 232
Query: 238 -------NEKKIEPCMGLSALLELDLPPKIKAKIEAVMTQKNAKELY 277
++ + + +L +LP K A + A + Q LY
Sbjct: 233 HGYRDAGEQQLPDEALRTLTILTKELPLKKAAALVAEIHQLKKNALY 279
>sp|Q08329|YFM4_MICOL Hypothetical protein in FMRO 3'region (ORF-4)
pir||PN0543 hypothetical protein 313 - Micromonospora olivasterospora
(fragment)
dbj|BAA02452.1| (D13171) ORF3 [Micromonospora olivasterospora]
Length = 313
Score = 129 bits (323), Expect = 5e-29
Identities = 79/237 (33%), Positives = 126/237 (52%), Gaps = 22/237 (9%)
Query: 2 LYFLPTPIGNLADITLRALEVLERCEVFLCEDTRVSKRLLHLLAQNPIISHSFPNIATKK 61
LY +PTPIGN DITLRA+EVL R V EDTR + RL L +
Sbjct: 33 LYLVPTPIGNPGDITLRAIEVLRRVGVVASEDTRHTYRLFQSLEIDA------------- 79
Query: 62 REFIAFHSHNDQEFLNQIKPSFFD-KEIAVMSDAGMPSLSDPGMSLAAYALKHNIQYDVL 120
+++H HN++ Q+ + ++A++SDAG P ++DPG L A A++ ++ L
Sbjct: 80 -RLVSYHDHNEESRSRQLLGLLREGTDVALVSDAGTPLVNDPGYRLVAAAVEADVPVRPL 138
Query: 121 PGANALTTAFCASGFLEGRFFYAGFLPHKSKERRLKIAKILNALAYLEEKTPVVFYESPH 180
PGA A TA SG +F Y GFLP K RR + + + A L +F+E+PH
Sbjct: 139 PGATASVTALIGSGMPNHQFHYVGFLPRKEAARRAALTALRSTPATL------IFFEAPH 192
Query: 181 RLLETLKDLNDLAKGMHLFAAKELTKLHQQYYLGEVSQIIERLQ-QSTIQGEWVLVL 236
R++ L DL + A+ LTK +++ G ++++ RL+ + ++G++ +V+
Sbjct: 193 RIVAMLADLAAVLGDRPAALARNLTKDDEEFLRGRLNELTARLRVEQVVRGQFTVVV 249
>ref|NP_345422.1| (NC_003028) tetrapyrrole methylase family protein [Streptococcus
pneumoniae TIGR4]
ref|NP_358432.1| (NC_003098) Conserved hypothetical protein [Streptococcus
pneumoniae R6]
gb|AAK75062.1| (AE007398) tetrapyrrole methylase family protein [Streptococcus
pneumoniae TIGR4]
gb|AAK99642.1| (AE008459) Conserved hypothetical protein [Streptococcus pneumoniae
R6]
Length = 289
Score = 128 bits (322), Expect = 6e-29
Identities = 86/275 (31%), Positives = 149/275 (53%), Gaps = 30/275 (10%)
Query: 2 LYFLPTPIGNLADITLRALEVLERCEVFLCEDTRVSKRLLHLLAQNPIISHSFPNIATKK 61
LY + TPIGNL D+T RA++ L+ + EDTR + LL +I+TK+
Sbjct: 16 LYLVATPIGNLDDMTFRAIQTLKEVDWIAAEDTRNTGLLLKHF-----------DISTKQ 64
Query: 62 REFIAFHSHNDQEFLNQIKPSF-FDKEIAVMSDAGMPSLSDPGMSLAAYALKHNIQYDVL 120
I+FH HN +E + + + IA +SDAG+PS+SDPG L A++ I +
Sbjct: 65 ---ISFHEHNAKEKIPDLIGFLKAGQSIAQVSDAGLPSISDPGHDLVKAAIEEEIAVVTV 121
Query: 121 PGANALTTAFCASGFLEGRFFYAGFLPHKSKERRLKIAKILNALAYLEEKTP--VVFYES 178
PGA+A +A ASG + GFLP KS +++ L++ P +FYES
Sbjct: 122 PGASAGISALIASGLAPQPHIFYGFLPRKSGQQKQFFG--------LKKDYPETQIFYES 173
Query: 179 PHRLLETLKDLNDLAKGMHLFAAKELTKLHQQYYLGEVSQIIERLQQSTIQGEWVLVLLN 238
PHR+ +TL+++ ++ + +ELTK++++Y G +S+++E + ++ ++GE +L++
Sbjct: 174 PHRVADTLENMLEVYGDRSVVLVRELTKIYEEYQRGTISELLESIAETPLKGECLLIVEG 233
Query: 239 EKKIEPCMGLSALLELDLPPKIKAKIEAVMTQKNA 273
+ G+ E DL +I+ +I+ + + A
Sbjct: 234 ASQ-----GVEEKDEEDLFVEIQTRIQQGVKKNQA 263
>ref|NP_384442.1| (NC_003047) CONSERVED HYPOTHETICAL PROTEIN [Sinorhizobium meliloti]
emb|CAC41773.1| (AL591783) CONSERVED HYPOTHETICAL PROTEIN [Sinorhizobium meliloti]
Length = 309
Score = 128 bits (321), Expect = 8e-29
Identities = 104/295 (35%), Positives = 153/295 (51%), Gaps = 33/295 (11%)
Query: 2 LYFLPTPIGNLADITLRALEVLERCEVFLCEDTRVSKRLLHLLAQNPIISHSFPNIATKK 61
LY + TPIGNL DITLRALE L +V CEDTRV++ LL + N T
Sbjct: 34 LYLVATPIGNLGDITLRALETLAGADVLACEDTRVTRVLLD--------RYGIVNRPT-- 83
Query: 62 REFIAFHSHNDQEFLNQIKPSFFD-KEIAVMSDAGMPSLSDPGMSLAAYALKHNIQYDVL 120
A+H HN E ++ + + K +A++SDAG P +SDPG LA A++ + +
Sbjct: 84 ----AYHEHNAAEAGPRLLAALGNGKSVALVSDAGTPLVSDPGYRLAQQAVEAGYRVVPI 139
Query: 121 PGANALTTAFCASGFLEGRFFYAGFLPHKSKERRLKIAKILNALAYLEEKTPVVFYESPH 180
PG +A A SG F +AGFLP K K +R ++A++ A L +F+ESPH
Sbjct: 140 PGPSAPLAALVGSGLPSDAFLFAGFLPVKDKAKRDRLAELAAVPATL------IFFESPH 193
Query: 181 RLLETLKDLND-LAKGMHLFAAKELTKLHQQY---YLGEVSQIIERLQQSTIQGEWVLVL 236
R+ T+ + L +ELTK +++ LGE++ I + + + ++GE VLV+
Sbjct: 194 RIAATVTAAAEVLGADRRAAVCRELTKTFEEFRRGTLGELAAIYD--ESANVRGEIVLVV 251
Query: 237 -LNEKKIEP-CMGLSALLE---LDLPPKIKAKIEAVMTQKNAKELYFQRLLEEKN 286
E K +P + ALL+ DLP KA EA A++ + RLL K+
Sbjct: 252 GPPEAKPQPEAADVDALLKELARDLPMG-KAATEAARRTGLARKELYDRLLHLKD 305
>ref|NP_078027.1| (NC_002162) conserved hypothetical [Ureaplasma urealyticum]
pir||A82922 conserved hypothetical UU195 [imported] - Ureaplasma urealyticum
gb|AAF30602.1|AE002119_7 (AE002119) conserved hypothetical [Ureaplasma urealyticum]
Length = 279
Score = 127 bits (320), Expect = 1e-28
Identities = 94/288 (32%), Positives = 150/288 (51%), Gaps = 35/288 (12%)
Query: 1 MLYFLPTPIGNLADITLRALEVLERCEVFLCEDTRVSKRLLHLLAQNPIISHSFPNIATK 60
+L + TPIGNL +++ R ++ L V LCEDTRV+ +LLHLL NI
Sbjct: 9 ILSVIATPIGNLEEVSERVIKCLNEAYVILCEDTRVTAKLLHLL-----------NIYDY 57
Query: 61 KREFIAFHSHNDQEFLNQIKPSFFDKEIAVMSDAGMPSLSDPGMSLAAYALKHNIQYDVL 120
K+ I++H+ N+ + LN+ A++SDAG P++SDPG L + NI V+
Sbjct: 58 KK-LISYHNFNEIQKLNEAINYIKKYPTALVSDAGYPTISDPGYKLINECHQQNIGIQVI 116
Query: 121 PGANALTTAFCASGFLEGRFFYAGFLPHKSKER--RLKIAKILNALAYLEEKTPVVFYES 178
G ++L A ASG F + GFL K+R +LK+ K L +T V YE+
Sbjct: 117 NGPSSLMHALVASGMCSQDFMFLGFLGKTQKQRVEKLKLYKNL--------QTTFVIYEA 168
Query: 179 PHRLLETLKDLNDLAKGMHLFAAKELTKLHQQYYLGEVSQIIERLQQSTIQGEWVLVLLN 238
HR+ +TL D+ ++ + +F +ELTK ++ +Y G +SQ L T +GE+V+V+ N
Sbjct: 169 VHRIEKTLMDIYEIWGDILIFIGRELTKKNESHYYGYLSQ----LPPITEKGEFVIVIDN 224
Query: 239 E--------KKIEPCM-GLSALLELDLPPKIKAKIEAVMTQKNAKELY 277
+ I C+ + L++ + K K + + ++KELY
Sbjct: 225 KINQDVIKNNNINECLIKIRDLMKQNFKLKDACKEVSKSSNFDSKELY 272
>ref|NP_641119.1| (NC_003919) conserved hypothetical protein [Xanthomonas axonopodis
pv. citri str. 306]
gb|AAM35655.1| (AE011707) conserved hypothetical protein [Xanthomonas axonopodis
pv. citri str. 306]
Length = 273
Score = 127 bits (318), Expect = 2e-28
Identities = 96/286 (33%), Positives = 140/286 (48%), Gaps = 31/286 (10%)
Query: 2 LYFLPTPIGNLADITLRALEVLERCEVFLCEDTRVSKRLL-HLLAQNPIISHSFPNIATK 60
L+ + TPIGNLAD++ RA EVL EDTR +++LL H P++
Sbjct: 7 LHVVATPIGNLADLSPRAQEVLRGVAAICAEDTRHTRQLLGHFGIDRPLL---------- 56
Query: 61 KREFIAFHSHNDQEFLNQIKPSFFDKE-IAVMSDAGMPSLSDPGMSLAAYALKHNIQYDV 119
A H HN+ +I D E +A++SDAG P +SDPG L A I+
Sbjct: 57 -----ALHDHNEDAMSERIVARLRDGESLAIVSDAGTPLVSDPGFKLVRAARAAGIKVSP 111
Query: 120 LPGANALTTAFCASGFLEGRFFYAGFLPHKSKERRLKIAKILNALAYLEEKTPVVFYESP 179
+PGA A A +G RF + GFLP KS RR ++A++ E +VFYES
Sbjct: 112 VPGACAAIAALSVAGLPSDRFGFEGFLPAKSAARRERLARLAG------ETRTLVFYESA 165
Query: 180 HRLLETLKDLN-DLAKGMHLFAAKELTKLHQQYYLGEVSQIIERLQQSTIQ--GEWVLVL 236
HR++E+L DL A+ELTKL + G ++Q+ +++ Q GE+V+++
Sbjct: 166 HRIVESLADLRFAFGDERPAVIARELTKLFETVLDGSLAQLQAQVEADDNQRKGEFVVMV 225
Query: 237 LN-----EKKIEPCMGLSALLELDLPPKIKAKIEAVMTQKNAKELY 277
E ++ + A L LPP AK+ A +T K LY
Sbjct: 226 QGAADAAEGQLAEGRRVYAKLAEHLPPSTAAKLAAELTGAPRKALY 271
>ref|NP_540687.1| (NC_003317) METHYLTRANSFERASE [Brucella melitensis]
gb|AAL52951.1| (AE009610) METHYLTRANSFERASE [Brucella melitensis]
Length = 303
Score = 126 bits (317), Expect = 2e-28
Identities = 102/301 (33%), Positives = 152/301 (49%), Gaps = 44/301 (14%)
Query: 2 LYFLPTPIGNLADITLRALEVLERCEVFLCEDTRVSKRLLHLLAQNPIISHSFPNIATKK 61
LY + TPIGNL D+TLR LE L ++ CEDTRV++ LL +
Sbjct: 28 LYIVSTPIGNLGDMTLRGLETLASADILACEDTRVTRVLLDRYGIS-------------- 73
Query: 62 REFIAFHSHNDQEFLNQIKPSFF-DKEIAVMSDAGMPSLSDPGMSLAAYALKHNIQYDVL 120
R I++H HN E ++ + K +A++SDAG P +SDPG L A + I+ +
Sbjct: 74 RRPISYHEHNAAEAGPKLIAALAAGKSVALVSDAGTPLVSDPGFRLVGDAREAGIRVVPV 133
Query: 121 PGANALTTAFCASGFLEGRFFYAGFLP--HKSKERRLKIAKILNALAYLEEKTPVVFYES 178
PGA+A+ A ASG F + GFLP H K+ RL+ K ++A +VFYES
Sbjct: 134 PGASAVLAALAASGLPTDAFMFCGFLPAKHGQKQSRLESLKGIDA--------TLVFYES 185
Query: 179 PHRLLETLKDLNDL-AKGMHLFAAKELTKLHQQYY---LGEVSQIIERLQQSTIQGEWVL 234
P+R TL D+ ++ G +ELTK ++ LGE+++ + + I+GE VL
Sbjct: 186 PNRAAATLSDMVEVFGTGRQGALCRELTKAYETIVTAPLGELAKTFD--GEDRIRGEVVL 243
Query: 235 ---------VLLNEKKIEPCMGLSALLELDLPPKIKAKIEAVMTQKNAKELYFQRLLEEK 285
V +E+ I+ + LS + E+ P KA EA K + +QRLL+ K
Sbjct: 244 LVGPPTGEAVAQSEEDIDRLL-LSLVAEM---PPSKAAGEAARMTGGQKSVLYQRLLQLK 299
Query: 286 N 286
+
Sbjct: 300 S 300
>ref|NP_105455.1| (NC_002678) hypothetical protein [Mesorhizobium loti]
sp|Q98DM9|YAD2_RHILO Hypothetical protein Mlr4632
dbj|BAB51241.1| (AP003004) hypothetical protein [Mesorhizobium loti]
Length = 294
Score = 126 bits (316), Expect = 3e-28
Identities = 102/293 (34%), Positives = 144/293 (48%), Gaps = 30/293 (10%)
Query: 2 LYFLPTPIGNLADITLRALEVLERCEVFLCEDTRVSKRLLHLLAQNPIISHSFPNIATKK 61
LY + TPIGNLADITLRALE L ++ CEDTRVS+ LL +
Sbjct: 16 LYLVATPIGNLADITLRALETLAAADIVACEDTRVSRVLLDRYGI--------------R 61
Query: 62 REFIAFHSHNDQEFLNQIKPSFFD-KEIAVMSDAGMPSLSDPGMSLAAYALKHNIQYDVL 120
R A+H HN E ++ + + +A++SDAG P +SDPG L A+ H I+ +
Sbjct: 62 RRTTAYHEHNAGEAGPKLIAALQGGQSVALISDAGTPLVSDPGYRLVGEAIDHGIRVVPI 121
Query: 121 PGANALTTAFCASGFLEGRFFYAGFLPHKSKER--RLKIAKILNALAYLEEKTPVVFYES 178
PG +A A ASG F +AGFLP K +R RL+ K + A ++F+ES
Sbjct: 122 PGPSAPLAALTASGLPSDAFLFAGFLPVKVGQRLTRLEALKAVPA--------TLIFFES 173
Query: 179 PHRLLETLKDLNDLAKGMHLFA-AKELTKLHQQYYLGEVSQIIERLQQS-TIQGEWVLVL 236
P RL E+L + + G A +ELTK ++ G + + + + T +GE V+ +
Sbjct: 174 PRRLAESLGAMVEALGGERKAAIGRELTKTFEEMRTGTLRALADHYAAADTPKGEIVVCV 233
Query: 237 --LNEKKIEPCMGLSALLELDLP-PKIKAKIEAVMTQKNAKELYFQRLLEEKN 286
K EP LL L P KA EA K+ ++RLLE K+
Sbjct: 234 GPAEAKADEPADIDRLLLSLAAEMPASKAASEAAKMTGGQKQALYRRLLELKD 286
>ref|NP_294359.1| (NC_001263) conserved hypothetical protein [Deinococcus
radiodurans]
pir||B75495 conserved hypothetical protein - Deinococcus radiodurans (strain
R1)
gb|AAF10214.1|AE001921_6 (AE001921) conserved hypothetical protein [Deinococcus radiodurans]
Length = 319
Score = 124 bits (310), Expect = 2e-27
Identities = 85/237 (35%), Positives = 122/237 (50%), Gaps = 27/237 (11%)
Query: 2 LYFLPTPIGNLADITLRALEVLERCEVFLCEDTRVSKRLL-HLLAQNPIISHSFPNIATK 60
++ +PTP+GNL D+TLRALEVL + CEDTR + LL HL + P++
Sbjct: 33 VWLVPTPVGNLGDLTLRALEVLRGADAVACEDTRRTGALLSHLDIRRPLV---------- 82
Query: 61 KREFIAFHSHNDQEFLNQIKPSFFDKEIAVMSDAGMPSLSDPGMSLAAYALKHNIQYDVL 120
A H + L + +A +SDAG P +SDPG L A+ +I +VL
Sbjct: 83 --RLDAHTMHRAAQVLEKYP------RLAYVSDAGTPGISDPGAELVQAAVAQDIPVEVL 134
Query: 121 PGANALTTAFCASGFLEGRFFYAGFLPHKSKERRLKIAKILNALAYLEEKTPVVFYESPH 180
PGA A A SG RF + GFLP +ER+ ++A ALA E T + YESPH
Sbjct: 135 PGATAFVPALVLSGLPTARFTFEGFLPRSGRERKERLA----ALAARAETT--ILYESPH 188
Query: 181 RLLETLKDL-NDLAKGMHLFAAKELTKLHQQYYLGEVSQIIERLQQSTIQGEWVLVL 236
RL TL DL +G +EL+K ++ G +S++ + ++GE V+V+
Sbjct: 189 RLHATLLDLAASCGEGRPASVTRELSKRFEETRRGPLSELAPHFAEG-VRGEIVVVV 244
>ref|NP_636104.1| (NC_003902) conserved hypothetical protein [Xanthomonas campestris
pv. campestris str. ATCC 33913]
gb|AAM40028.1| (AE012170) conserved hypothetical protein [Xanthomonas campestris
pv. campestris str. ATCC 33913]
Length = 273
Score = 122 bits (306), Expect = 5e-27
Identities = 91/286 (31%), Positives = 140/286 (48%), Gaps = 31/286 (10%)
Query: 2 LYFLPTPIGNLADITLRALEVLERCEVFLCEDTRVSKRLL-HLLAQNPIISHSFPNIATK 60
L+ + TPIGNLAD++ RA E L EDTR +++LL H P++
Sbjct: 7 LHVVATPIGNLADLSPRAQETLRGVAAICAEDTRHTRQLLSHFGIDRPLL---------- 56
Query: 61 KREFIAFHSHNDQEFLNQIKPSFFDKE-IAVMSDAGMPSLSDPGMSLAAYALKHNIQYDV 119
A H HN++ +I + E +A++SDAG P +SDPG L A + I+
Sbjct: 57 -----ALHDHNEEAMSERIVTRLREGESLAIVSDAGTPLVSDPGFKLVRAAREAGIRVSP 111
Query: 120 LPGANALTTAFCASGFLEGRFFYAGFLPHKSKERRLKIAKILNALAYLEEKTPVVFYESP 179
+PGA A A +G RF + GFLP KS RR +++++ E +VFYES
Sbjct: 112 VPGACAAIAALSVAGLPSDRFGFEGFLPAKSAARRERLSRLAG------ETRTLVFYESS 165
Query: 180 HRLLETLKDLND-LAKGMHLFAAKELTKLHQQYYLGEVSQIIERLQQSTIQ--GEWVLVL 236
HR++E+L DL A+ELTKL + G ++ + +++ Q GE+V+++
Sbjct: 166 HRIVESLADLRSAFGDDRPAVIARELTKLFETVLDGSLADLQAQVEADDNQRKGEFVVMV 225
Query: 237 LN-----EKKIEPCMGLSALLELDLPPKIKAKIEAVMTQKNAKELY 277
+ ++ + A L LPP AK+ A +T K LY
Sbjct: 226 QGAADAADGQLAEGRRVYAKLAEHLPPSTAAKLAAELTGAPRKALY 271
>ref|NP_660442.1| (NC_004061) hypothetical 31.3 kD protein in agaI-mtr [Buchnera
aphidicola str. Sg (Schizaphis graminum)]
gb|AAM67653.1| (AE014083) hypothetical 31.3 kD protein in agaI-mtr [Buchnera
aphidicola str. Sg (Schizaphis graminum)]
Length = 285
Score = 121 bits (304), Expect = 8e-27
Identities = 100/302 (33%), Positives = 158/302 (52%), Gaps = 40/302 (13%)
Query: 1 MLYFLPTPIGNLADITLRALEVLERCEVFLCEDTRVSKRLL-HLLAQNPIISHSFPNIAT 59
+LY +PTPIGNL+DIT RA+E L+ + E+ + LL H +N +IS + N
Sbjct: 9 LLYIVPTPIGNLSDITYRAVETLKNVNLIAAENIHHTNILLQHYNVKNILISLN-KNNEK 67
Query: 60 KKREFIAFHSHNDQEFLNQIKPSFFDKEIAVMSDAGMPSLSDPGMSLAAYALKHNIQYDV 119
K+ +++ +N++K K+IA++SDAG P ++DPG L NI+
Sbjct: 68 KQSDYV----------INELKKG---KKIALVSDAGTPVINDPGYFLVKKCCFLNIKIIP 114
Query: 120 LPGANALTTAFCASGFLEGRFFYAGFLPHKSKERRLKIAKILNALAYLEEKTPVVFYESP 179
LPG A TA ASG RF Y GFLP K K RR +L +L +E ++FYES
Sbjct: 115 LPGPCAAITALSASGISTNRFCYEGFLPSKKKIRR----DLLKSLK--KEIRTIIFYESK 168
Query: 180 HRLLETLKD-LNDLAKGMHLFAAKELTKLHQQYYLGEVSQIIERLQQSTI---QGEWVLV 235
HR+LE++KD + + + +L A+E+TK + Y + + I+ L++ +GE V++
Sbjct: 169 HRILESIKDIIETIDENRYLVIAREITKKWEYIYGAKANIILSWLKEDQSRYKKGEIVII 228
Query: 236 L----------LNEKKIEPCMGLSALLELDLPPKIKAKIEAVMTQKNAKELYFQRLLEEK 285
+ ++ K I L L L I +KI + +KN +LY Q ++EK
Sbjct: 229 IDGFKELKNKDISAKAINTLTILRNFLSLKQSVFITSKIHKI--KKN--DLY-QHAIKEK 283
Query: 286 NQ 287
++
Sbjct: 284 DK 285
>ref|NP_253112.1| (NC_002516) conserved hypothetical protein [Pseudomonas aeruginosa]
sp|Q9HVZ3|Y8C2_PSEAE Hypothetical protein PA4422
pir||F83091 conserved hypothetical protein PA4422 [imported] - Pseudomonas
aeruginosa (strain PAO1)
gb|AAG07810.1|AE004857_1 (AE004857) conserved hypothetical protein [Pseudomonas aeruginosa]
Length = 282
Score = 120 bits (302), Expect = 1e-26
Identities = 98/295 (33%), Positives = 148/295 (49%), Gaps = 39/295 (13%)
Query: 2 LYFLPTPIGNLADITLRALEVLERCEVFLCEDTRVSKRLL-HLLAQNPIISHSFPNIATK 60
L+ + TPIGNL DI+ RAL VL + EDTR S RL H + P+
Sbjct: 6 LFVVATPIGNLDDISPRALRVLREVALVAAEDTRHSIRLFQHFGIETPLA---------- 55
Query: 61 KREFIAFHSHNDQE----FLNQIKPSFFDKEIAVMSDAGMPSLSDPGMSLAAYALKHNIQ 116
A H HN++E F+++++ +++A++SDAG P +SDPG L A I+
Sbjct: 56 -----ACHEHNEREEGGRFISRLQGG---EDVALISDAGTPLISDPGFHLVRQAQALGIR 107
Query: 117 YDVLPGANALTTAFCASGFLEGRFFYAGFLPHKSKERRLKIAKILNALAYLEEKTPVVFY 176
+PG+ AL A A+G RF + GFLP K+ RR ++ A EE ++FY
Sbjct: 108 VVPVPGSCALIAALSAAGLPSDRFIFEGFLPAKAAGRRSRLQ------AVQEEPRTLIFY 161
Query: 177 ESPHRLLETLKDLNDLAKG-MHLFAAKELTKLHQQYYLGEVSQIIERLQQSTIQ--GEWV 233
E+PHRLLE+L D+ D+ G A+EL+K + ++++ + + + Q GE V
Sbjct: 162 EAPHRLLESLADMRDVFGGERRAVLARELSKTFETIRSLPLAELHDWVASDSNQQRGECV 221
Query: 234 LVLL--NEKKIEPCMGLSALLELD-----LPPKIKAKIEAVMTQKNAKELYFQRL 281
+++ + E +G AL LD LP K A + A +T LY Q L
Sbjct: 222 VLVAGWQAPEGEESIGAEALRVLDLLLAELPLKKAAALAAEITGVRKNLLYQQAL 276
>ref|NP_297842.1| (NC_002488) conserved hypothetical protein [Xylella fastidiosa
9a5c]
sp|Q9PFV5|Y552_XYLFA Hypothetical protein XF0552
pir||F82792 conserved hypothetical protein XF0552 [imported] - Xylella
fastidiosa (strain 9a5c)
gb|AAF83362.1|AE003902_7 (AE003902) conserved hypothetical protein [Xylella fastidiosa 9a5c]
Length = 273
Score = 120 bits (301), Expect = 2e-26
Identities = 89/286 (31%), Positives = 138/286 (48%), Gaps = 31/286 (10%)
Query: 2 LYFLPTPIGNLADITLRALEVLERCEVFLCEDTRVSKRLL-HLLAQNPIISHSFPNIATK 60
L+ + TPIGNL D++ RA +L + EDTR +++LL H + P++
Sbjct: 7 LHIVATPIGNLGDLSPRAQHILRTVTMICAEDTRHTRQLLAHFGIERPLL---------- 56
Query: 61 KREFIAFHSHNDQEFLNQIKPSFFD-KEIAVMSDAGMPSLSDPGMSLAAYALKHNIQYDV 119
A H+HN+ +I +A++SDAG P +SDPG L A I+
Sbjct: 57 -----ALHAHNEDTLAERIITRLISGASLALVSDAGTPLISDPGFLLVRAARAAGIRVTP 111
Query: 120 LPGANALTTAFCASGFLEGRFFYAGFLPHKSKERRLKIAKILNALAYLEEKTPVVFYESP 179
+PG +AL A SG RF + GFLP K RR ++ + + E ++FYE+
Sbjct: 112 VPGPSALIAALSVSGLPSNRFTFEGFLPAKPTARRDRLTHLAH------EPRTLIFYEAS 165
Query: 180 HRLLETLKDLNDLAKGMH-LFAAKELTKLHQQYYLGEVSQIIERLQQSTIQ--GEWVLVL 236
HR+ E L DL + M A+ELTK+ + G ++ + ++ Q GE+V+++
Sbjct: 166 HRIAECLTDLATIFGSMRAAVVARELTKIFETVLDGTLATLQTQVANDDNQRKGEFVIIV 225
Query: 237 -----LNEKKIEPCMGLSALLELDLPPKIKAKIEAVMTQKNAKELY 277
+ KI + ALL+ LPP AK+ A +T K LY
Sbjct: 226 QGAADQDAAKITEGRRVYALLKEHLPPSSAAKLAAEITGAPRKALY 271
>ref|NP_531008.1| (NC_003304) tetrapyrrole methylase family protein [Agrobacterium
tumefaciens str. C58 (U. Washington)]
gb|AAL41324.1| (AE009001) tetrapyrrole methylase family protein [Agrobacterium
tumefaciens str. C58 (U. Washington)]
Length = 313
Score = 120 bits (300), Expect = 2e-26
Identities = 97/293 (33%), Positives = 144/293 (49%), Gaps = 29/293 (9%)
Query: 2 LYFLPTPIGNLADITLRALEVLERCEVFLCEDTRVSKRLLHLLAQNPIISHSFPNIATKK 61
LY + TPIGNL DIT+RALE L +V CEDTRV++ LL I T+
Sbjct: 38 LYLVATPIGNLGDITIRALETLASADVLACEDTRVTRILLERYG-----------IRTRP 86
Query: 62 REFIAFHSHNDQEFLNQIKPSF-FDKEIAVMSDAGMPSLSDPGMSLAAYALKHNIQYDVL 120
+A+H HN E ++ + K +A++SDAG P +SDPG L AL+ + +
Sbjct: 87 ---LAYHEHNANEAGPKLIAALEAGKSVALVSDAGTPLVSDPGYRLGQLALEAGHRVVPV 143
Query: 121 PGANALTTAFCASGFLEGRFFYAGFLPHKSKERRLKIAKILNALAYLEEKTPVVFYESPH 180
PGA+A A SG F +AGFLP K + +R + A + A L +F+ESP
Sbjct: 144 PGASAPLAALVGSGMPSDAFLFAGFLPVKDRGKRDRFAGLAKIPATL------IFFESPR 197
Query: 181 RLLETLKDLND-LAKGMHLFAAKELTKLHQQYYLGEVSQIIERLQ-QSTIQGEWVLVLLN 238
R+ +LK ++ L + +ELTK +++ G + ++ + ++GE VL++
Sbjct: 198 RIGASLKVASEVLGRDRRAVVCRELTKTFEEFRRGTLGELADYYDGDRVVKGEIVLLVEP 257
Query: 239 EK-----KIEPCMGLSALLELDLPPKIKAKIEAVMTQKNAKELYFQRLLEEKN 286
IE L L + A A +T KELY QRLL+ K+
Sbjct: 258 PSYDEIPDIEDVEKLLKDLVATMSAAKAAGEAAKLTGLPRKELY-QRLLDMKD 309
>ref|NP_109759.1| (NC_000912) hypothetical protein (yabC) homolog; similar to
Swiss-Prot Accession Number P37544, from B. subtilis
[Mycoplasma pneumoniae]
sp|P75046|Y056_MYCPN Hypothetical protein MG056 homolog (D09_orf276)
pir||S73410 hypothetical protein yabC - Mycoplasma pneumoniae (strain ATCC
29342)
gb|AAB95732.1| (AE000010) hypothetical protein (yabC) homolog; similar to
Swiss-Prot Accession Number P37544, from B. subtilis
[Mycoplasma pneumoniae]
Length = 276
Score = 120 bits (300), Expect = 2e-26
Identities = 77/239 (32%), Positives = 121/239 (50%), Gaps = 22/239 (9%)
Query: 2 LYFLPTPIGNLADITLRALEVLERCEVFLCEDTRVSKRLLHLLAQNPIISHSFPNIATKK 61
L + TPIGN+ +++ R L +CEV CEDTRV+K+LL LL I
Sbjct: 4 LKVIATPIGNIEEVSPRVKAALTKCEVLFCEDTRVTKKLLGLL-----------GIDFSN 52
Query: 62 REFIAFHSHNDQEFLNQIKPSFFDKEIAVMSDAGMPSLSDPGMSLAAYALKH--NIQYDV 119
++FI + +++ L+++ ++SDAG PS+SDPG L Y I +V
Sbjct: 53 KQFIINNEFKEKQNLSKVANLIHQYHCGLVSDAGYPSVSDPGHILVEYVRTQLPQIAIEV 112
Query: 120 LPGANALTTAFCASGFLEGRFFYAGFLPHKSKERRLKIAKILNALAYLEEKTPVVFYESP 179
+ G +AL SGF E + GFL HK + + + L Y + +V +E+
Sbjct: 113 INGPSALVCGLVTSGFPESPLLFLGFLDHKPTQ----VTQTLK--HYQNFQGTIVLFEAV 166
Query: 180 HRLLETLKDLNDLAKGMHLFAAKELTKLHQQYYLGEVSQIIERLQQSTIQGEWVLVLLN 238
HRL +TL+ + + +F +ELTKLH+ +Y S L T++GE+V+V+ N
Sbjct: 167 HRLQQTLEVIQTVFSNTEVFVGRELTKLHESHYWFNTS---APLPDITLKGEFVIVINN 222
>ref|NP_521385.1| (NC_003295) HYPOTHETICAL TRANSMEMBRANE PROTEIN [Ralstonia
solanacearum]
emb|CAD17054.1| (AL646074) HYPOTHETICAL TRANSMEMBRANE PROTEIN [Ralstonia
solanacearum]
Length = 300
Score = 114 bits (286), Expect = 9e-25
Identities = 100/298 (33%), Positives = 137/298 (45%), Gaps = 34/298 (11%)
Query: 2 LYFLPTPIGNLADITLRALEVLERCEVFLCEDTRVSKRLLHLLAQNPIISHSFPNIATKK 61
LY + TPIGN AD++LRA VL + CEDTR + +LLH L +
Sbjct: 20 LYVVATPIGNAADVSLRARHVLGLADAVACEDTRNTGQLLHRLGLS-------------- 65
Query: 62 REFIAFHSHNDQEFLNQIKPSFFDKE-IAVMSDAGMPSLSDPGMSLAAYALKHNIQYDVL 120
R +A H HN++E +I E IA +SDAG P +SDPG + + L
Sbjct: 66 RPLLAAHEHNEREAAARIVERLARGERIAYVSDAGTPGVSDPGARIVEAVRAAGQRVIPL 125
Query: 121 PGANALTTAFCASGFL----EGRFFYAGFLPHKSKERRLKIAKILNALAYLEEKTPVVFY 176
PGA+A+ TA A+G L G+F + GFLP K+ +R I + + V Y
Sbjct: 126 PGASAVVTALSAAGALLETSAGQFTFVGFLPPKAGQRDTAIRQ------WAAHGPAWVLY 179
Query: 177 ESPHRLLETLKDLNDLAKGMHLFAAKELTKLHQQYYLGEVSQIIERL--QQSTIQGEWVL 234
E+PHR+ TL L L +ELTKL +Q + ++ L S +GE+VL
Sbjct: 180 EAPHRIDATLAALAAHLPARRLLIGRELTKLFEQIVVLPAAEAPAWLAADASHGKGEFVL 239
Query: 235 VLLNEKKIEPCMGLSA------LLELDLPPKIKAKIEAVMTQKNAKELYFQRLLEEKN 286
V+ E A LL +LP K AK+ +T LY Q L KN
Sbjct: 240 VVEGAGAQEAAPTALAADQVLRLLLAELPAKRAAKLAGAITGAPVDALY-QSALALKN 296
>gb|AAD19411.1| (AF102543) unknown [Zymomonas mobilis]
Length = 293
Score = 113 bits (283), Expect = 2e-24
Identities = 82/272 (30%), Positives = 128/272 (46%), Gaps = 24/272 (8%)
Query: 2 LYFLPTPIGNLADITLRALEVLERCEVFLCEDTRVSKRLLHLLAQNPIISHSFPNIATKK 61
LY + TPIGNL+D++LRA ++L+R ++ ED+RV+ +LL + K
Sbjct: 21 LYIVATPIGNLSDLSLRAADILKRADLIAVEDSRVTAKLLQHIGI--------------K 66
Query: 62 REFIAFHSHNDQEFLNQIKPSFFDKEIAVMSDAGMPSLSDPGMSLAAYALKHNIQYDVLP 121
R IA+H HN Q+ P + IA++SDAG P +SDPG L A + +P
Sbjct: 67 RPMIAYHDHNADYLRPQLLPRLNHEAIALVSDAGTPLISDPGFKLVRDARQSGAYVTTIP 126
Query: 122 GANALTTAFCASGFLEGRFFYAGFLPHKSKERRLKIAKILNALAYLEEKTPVVFYESPHR 181
G A A SG RF + GFLP K R+ AL ++F SP R
Sbjct: 127 GPCAAIAALTLSGLPSDRFLFIGFLPPKENARK-------KALESGWHCCNLIFTNSP-R 178
Query: 182 LLETLKDLNDLAKGMHLFAAKELTKLHQQYYLGEVSQIIERLQQSTIQGEWVLVL--LNE 239
L+ L L+ + +E+TK ++ +S++I Q+ + E V+++ N+
Sbjct: 179 LISVLTSLHQILGDREAAVTREITKKFEECQTAPLSELITHYQEKPPKDELVILVSPANK 238
Query: 240 KKIEPCMGLSALLELDLPPKIKAKIEAVMTQK 271
K + ALLE L K A++ ++
Sbjct: 239 KTEIGEDEVKALLETALKDHSVGKSAALVAKQ 270
>ref|NP_175126.1| (NM_103586) hypothetical protein [Arabidopsis thaliana]
Length = 337
Score = 113 bits (282), Expect = 3e-24
Identities = 88/289 (30%), Positives = 138/289 (47%), Gaps = 42/289 (14%)
Query: 2 LYFLPTPIGNLADITLRALEVLERCEVFLCEDTRVSKRLLHLLAQNPIISHSFPNIATKK 61
LY + TPIGNL DITLR+ +V+ L EDTR S +LL + NI K
Sbjct: 57 LYLVGTPIGNLEDITLRSADVI------LSEDTRHSGKLLQ-----------YYNI---K 96
Query: 62 REFIAFHSHND----QEFLNQIKPSFFDKEIAVMSDAGMPSLSDPGMSLAAYALKHNIQY 117
+ +++H N+ Q L ++K + +A++SDAG P +SDPG LA K NI
Sbjct: 97 AQLLSYHKFNEAQREQAVLTRLKQG---EIVALISDAGTPGISDPGTQLAKMCAKENIDV 153
Query: 118 DVLPGANALTTAFCASGFLEGRFFYAGFLPHKSKERRLKIAKILNALAYLEEKTPVVFYE 177
+PGA A+ A ASG F + GFLP S R+ ++ N E +FY
Sbjct: 154 IPIPGACAVVAALSASGLETDEFTFVGFLPKHSGTRKERLIVSSN------ETRTQIFYV 207
Query: 178 SPHRLLETLKDLND-LAKGMHLFAAKELTKLHQQYYLGEVSQIIERLQQSTIQGEWVLVL 236
PH+L + L++ + A+E+TKLH++++ G +++ + +GE L++
Sbjct: 208 PPHKLSQFLEETTPYFGESRQCVIAREITKLHEEFWRGSIAEAKQEFLIRQPKGEITLLI 267
Query: 237 LNEKKIEPCMGLSALLELDLPPKIK--------AKIEAVMTQKNAKELY 277
+++ + + LE +L I K A T KE+Y
Sbjct: 268 EGKEETKAENPTESQLEEELRGLISDGHSLSTAVKTVAERTSMRKKEVY 316
>ref|NP_219412.1| (NC_000919) conserved hypothetical protein [Treponema pallidum]
sp|O83940|Y975_TREPA Hypothetical protein TP0975
pir||E71257 conserved hypothetical protein TP0975 - syphilis spirochete
gb|AAC65931.1| (AE001265) conserved hypothetical protein [Treponema pallidum]
Length = 274
Score = 112 bits (279), Expect = 6e-24
Identities = 87/277 (31%), Positives = 130/277 (46%), Gaps = 45/277 (16%)
Query: 2 LYFLPTPIGNLADITLRALEVLERCEVFLCEDTRVSKRLL-HLLAQNPIISHSFPNIATK 60
LY + TPIGNLADITLRAL+VL +V CEDTR ++ LL H ++S N A
Sbjct: 4 LYVVATPIGNLADITLRALDVLRTVDVVACEDTRRTRALLSHFGIHKRLVSCRAHNEAQA 63
Query: 61 KREFIAFHSHNDQEFLNQIKPSFFDK---------------------------------- 86
R I F S FL+ K
Sbjct: 64 ARRLIHFLSTPISAFLSPEKGRGRQSARRTRARPGETVGTAALQLAAEATGEQEVCGSPH 123
Query: 87 -EIAVMSDAGMPSLSDPGMSLAAYALKHNIQYDVLPGANALTTAFCASGFLEGRFFYAGF 145
++A +SDAG P +SDPG L +PGA+ALTT +G + + GF
Sbjct: 124 AQVAYVSDAGTPGVSDPGAVLVRAVRDAGHTVVPIPGASALTTLLSVAGVRDKTVLFEGF 183
Query: 146 L-PHKSKERRLKIAKILNALAYLEEKTPVVFYESPHRLLETLKDLNDLAKGMHLFAAKEL 204
L PH + R A+++ A ++ V YESP+R+ + L+DL +A + +EL
Sbjct: 184 LSPHPGRRR----ARLVQLCA---QRVAFVLYESPYRVQKLLEDLVAVAPESQVVLGREL 236
Query: 205 TKLHQQYYLGEVSQIIERL-QQSTIQGEWVLVLLNEK 240
TK+H++ +G +++E ++ ++GE VL++ EK
Sbjct: 237 TKVHEELCVGTALRVMESFCARTRVRGECVLLVSAEK 273
>ref|NP_212561.1| (NC_001318) conserved hypothetical protein [Borrelia burgdorferi]
pir||B70153 conserved hypothetical protein BB0427 - Lyme disease spirochete
gb|AAC66807.1| (AE001148) conserved hypothetical protein [Borrelia burgdorferi]
Length = 263
Score = 108 bits (271), Expect = 5e-23
Identities = 69/238 (28%), Positives = 123/238 (50%), Gaps = 21/238 (8%)
Query: 1 MLYFLPTPIGNLADITLRALEVLERCEVFLCEDTRVSKRLLHLLAQNPIISHSFPNIATK 60
+LY + TPIGNL DIT RA++VL+ V EDTRV+ +LL N + K
Sbjct: 40 VLYIVGTPIGNLEDITYRAIDVLKSVNVIFAEDTRVTSKLLSRYKINKKMISCNAVTENK 99
Query: 61 KREFIAFHSHNDQEFLNQIKPSFFDKEIAVMSDAGMPSLSDPGMSLAAYALKHNIQYDVL 120
K + ++L + +A +SDAG P LSDPG L A A + + +
Sbjct: 100 KISLLL-------DYLAK------GNSVAFVSDAGTPGLSDPGSLLVAAAFREGYKVCPI 146
Query: 121 PGANALTTAFCASGFLEGRFFYAGFLPHKSKERRLKIAKILNALAYLEEKTPVVFYESPH 180
PG ++ T + F + F+ GFLP+K +R +IA++ + V ES H
Sbjct: 147 PGVSSFNTIVSVNPFRDKSVFFEGFLPNKGLKRFKRIAEL------YKRGDAFVLLESGH 200
Query: 181 RLLETLKDLNDLAKGMHLFAAKELTKLHQQYYLGEVSQIIERLQQS--TIQGEWVLVL 236
R+L+ L +++ ++ + +E+TK++++Y +G+ ++ + + S ++GE+ +++
Sbjct: 201 RILKLLVEISSVSLDAKVLIGREMTKIYEEYQIGKPLELKKYFESSKDKVKGEFTILV 258
>ref|NP_418963.1| (NC_002696) tetrapyrrole methylase family protein [Caulobacter
crescentus CB15]
gb|AAK22131.1| (AE005688) tetrapyrrole methylase family protein [Caulobacter
crescentus CB15]
Length = 290
Score = 108 bits (269), Expect = 9e-23
Identities = 80/241 (33%), Positives = 116/241 (47%), Gaps = 30/241 (12%)
Query: 2 LYFLPTPIGNLADITLRALEVLERCEVFLCEDTRVSKRLLHLLAQNPIISHSFPNIATKK 61
LY + TPIGNL DITLRAL+VL C+V L EDTRV+ +LL S I T+
Sbjct: 19 LYLVATPIGNLRDITLRALDVLAGCDVLLAEDTRVTGKLL-----------SAYGIRTRL 67
Query: 62 REFIAFHSHNDQEFLNQIKPSFFDK-----EIAVMSDAGMPSLSDPGMSLAAYALKHNIQ 116
+D+ + P ++ +A++SDAG P +SDPG LA A+
Sbjct: 68 ER-------HDEHVAERSIPGILERLAAGERVALVSDAGTPMVSDPGYRLAREAIAAGHD 120
Query: 117 YDVLPGANALTTAFCASGFLEGRFFYAGFLPHKSKERRLKIAKILNALAYLEEKTPVVFY 176
+PGA+A A +G RF +AGF P KS RR + N A L +FY
Sbjct: 121 VIPIPGASAALAALTLAGLPTERFLFAGFPPPKSAARRTFFEEFANTRATL------IFY 174
Query: 177 ESPHRLLETLKDLNDL-AKGMHLFAAKELTKLHQQYYLGEVSQIIERLQQSTIQGEWVLV 235
E R+ + L D+ + +ELTKL++ G +S + + +GE V++
Sbjct: 175 EGASRVADCLADMAAVFGADRPAAVCRELTKLYETCVRGPLSDLAADPRFDAPKGEIVIL 234
Query: 236 L 236
+
Sbjct: 235 V 235
>ref|NP_600118.1| (NC_003450) COG0313:Predicted methyltransferases [Corynebacterium
glutamicum]
Length = 282
Score = 104 bits (259), Expect = 1e-21
Identities = 70/230 (30%), Positives = 108/230 (46%), Gaps = 19/230 (8%)
Query: 7 TPIGNLADITLRALEVLERCEVFLCEDTRVSKRLLHLLAQNPIISHSFPNIATKKREFIA 66
TP+GN+ D + R + L V EDTR + L L K + ++
Sbjct: 17 TPLGNIGDASPRLVHALANATVVAAEDTRRTASLAAALG------------VEIKGQLVS 64
Query: 67 FHSHNDQEFLNQIKPSFFDKEIAVMSDAGMPSLSDPGMSLAAYALKHNIQYDVLPGANAL 126
HN+Q + ++ + + V+SDAGMP +SDPG +L A NI PG +A+
Sbjct: 65 NFDHNEQARVGKLIEAARTGTVLVVSDAGMPVVSDPGFALIDAAHDANIPVTCFPGPSAV 124
Query: 127 TTAFCASGFLEGRFFYAGFLPHKSKERRLKIAKILNALAYLEEKTPVVFYESPHRLLETL 186
TA SG GRF + GF P K R + + EK V F+ESPHR+ ETL
Sbjct: 125 PTALALSGLHVGRFAFDGFAPRKQGARTTWLESLKT------EKRAVCFFESPHRIAETL 178
Query: 187 KDLNDLAKGMHLFAAKELTKLHQQYYLGEVSQIIERLQQSTIQGEWVLVL 236
++ + +EL+K ++Q G + ++ E Q ++GE +V+
Sbjct: 179 AHAAEVLGERRVAVCRELSKTYEQVKRGTLPELAEWAQDG-VRGEITVVI 227
>dbj|BAB98284.1| (AP005276) Predicted methyltransferases [Corynebacterium glutamicum
ATCC 13032]
Length = 275
Score = 104 bits (259), Expect = 1e-21
Identities = 70/230 (30%), Positives = 108/230 (46%), Gaps = 19/230 (8%)
Query: 7 TPIGNLADITLRALEVLERCEVFLCEDTRVSKRLLHLLAQNPIISHSFPNIATKKREFIA 66
TP+GN+ D + R + L V EDTR + L L K + ++
Sbjct: 10 TPLGNIGDASPRLVHALANATVVAAEDTRRTASLAAALG------------VEIKGQLVS 57
Query: 67 FHSHNDQEFLNQIKPSFFDKEIAVMSDAGMPSLSDPGMSLAAYALKHNIQYDVLPGANAL 126
HN+Q + ++ + + V+SDAGMP +SDPG +L A NI PG +A+
Sbjct: 58 NFDHNEQARVGKLIEAARTGTVLVVSDAGMPVVSDPGFALIDAAHDANIPVTCFPGPSAV 117
Query: 127 TTAFCASGFLEGRFFYAGFLPHKSKERRLKIAKILNALAYLEEKTPVVFYESPHRLLETL 186
TA SG GRF + GF P K R + + EK V F+ESPHR+ ETL
Sbjct: 118 PTALALSGLHVGRFAFDGFAPRKQGARTTWLESLKT------EKRAVCFFESPHRIAETL 171
Query: 187 KDLNDLAKGMHLFAAKELTKLHQQYYLGEVSQIIERLQQSTIQGEWVLVL 236
++ + +EL+K ++Q G + ++ E Q ++GE +V+
Sbjct: 172 AHAAEVLGERRVAVCRELSKTYEQVKRGTLPELAEWAQDG-VRGEITVVI 220
>gb|AAF69160.1|AC007915_12 (AC007915) F27F5.18 [Arabidopsis thaliana]
Length = 366
Score = 100 bits (249), Expect = 2e-20
Identities = 89/318 (27%), Positives = 138/318 (42%), Gaps = 71/318 (22%)
Query: 2 LYFLPTPIGNLADITLRALEVLERCEVFLCEDTRVSKRLLHLLAQNPIISHSFPNIATKK 61
LY + TPIGNL DITLR+ +V+ L EDTR S +LL + NI K
Sbjct: 57 LYLVGTPIGNLEDITLRSADVI------LSEDTRHSGKLLQ-----------YYNI---K 96
Query: 62 REFIAFHSHND----QEFLNQIKPSFFDKEIAVMSDAGMPSLSDPGMSLAAYALKHNIQY 117
+ +++H N+ Q L ++K + +A++SDAG P +SDPG LA K NI
Sbjct: 97 AQLLSYHKFNEAQREQAVLTRLKQG---EIVALISDAGTPGISDPGTQLAKMCAKENIDV 153
Query: 118 DVLPGANALTTAFCASGFLEGRFFYAGFLPHKSKERRLKIAKILNALAYLEEKTPVVFYE 177
+PGA A+ A ASG F + GFLP S R+ ++ N E +FY
Sbjct: 154 IPIPGACAVVAALSASGLETDEFTFVGFLPKHSGTRKERLIVSSN------ETRTQIFYV 207
Query: 178 SPHRLLETLKDLNDLAKGMHL------------------------------FAAKELTKL 207
PH+L + L++ L A+E+TKL
Sbjct: 208 PPHKLSQFLEETTPYFGESSLSQCDIFYLLVLRLRSSPMPGPDIDLWCRQCVIAREITKL 267
Query: 208 HQQYYLGEVSQIIERLQQSTIQGEWVLVLLNEKKIEPCMGLSALLELDLPPKIK------ 261
H++++ G +++ + +GE L++ +++ + + LE +L I
Sbjct: 268 HEEFWRGSIAEAKQEFLIRQPKGEITLLIEGKEETKAENPTESQLEEELRGLISDGHSLS 327
Query: 262 --AKIEAVMTQKNAKELY 277
K A T KE+Y
Sbjct: 328 TAVKTVAERTSMRKKEVY 345
>ref|NP_627369.1| (NC_003888) conserved hypothetical protein [Streptomyces coelicolor
A3(2)]
emb|CAB59649.1| (AL132674) conserved hypothetical protein [Streptomyces coelicolor
A3(2)]
Length = 286
Score = 94.7 bits (234), Expect = 1e-18
Identities = 63/217 (29%), Positives = 109/217 (50%), Gaps = 24/217 (11%)
Query: 7 TPIGNLADITLRALEVLERCEVFLCEDTRVSKRLLHLLAQNP---IISHSFPNIATKKRE 63
TPIG++ D R L +V EDTR +RL L P ++S+ N + + E
Sbjct: 10 TPIGDVQDAPPRLAAELAGADVVAAEDTRRLRRLTQALGVAPAGRVVSYFEGNESARTPE 69
Query: 64 FIAFHSHNDQEFLNQIKPSFFDKEIAVMSDAGMPSLSDPGMSLAAYALKHNIQYDVLPGA 123
+ +E + + +++DAGMPS+SDPG L A A++ ++ +PG
Sbjct: 70 LV-------EELAGGAR-------VLLVTDAGMPSVSDPGYRLVAAAVERGVRVTAVPGP 115
Query: 124 NALTTAFCASGFLEGRFFYAGFLPHKSKERRLKIAKILNALAYLEEKTPVVFYESPHRLL 183
+A+ TA SG RF + GFLP K+ ER ++ ++ E+ +V++E+PHRL
Sbjct: 116 SAVLTALALSGLPVDRFCFEGFLPRKAGERLTRLREVAG------ERRTLVYFEAPHRLD 169
Query: 184 ETLKDLNDL-AKGMHLFAAKELTKLHQQYYLGEVSQI 219
+TL + ++ +ELTK +++ G + ++
Sbjct: 170 DTLAAMAEVFGTDRRAAVCRELTKTYEEVRRGGLGEL 206
>ref|NP_353332.1| (NC_003062) AGR_C_523p [Agrobacterium tumefaciens] [Agrobacterium
tumefaciens str. C58 (Cereon)]
gb|AAK86117.1| (AE007968) AGR_C_523p [Agrobacterium tumefaciens str. C58 (Cereon)]
Length = 258
Score = 92.8 bits (229), Expect = 4e-18
Identities = 83/275 (30%), Positives = 129/275 (46%), Gaps = 29/275 (10%)
Query: 20 LEVLERCEVFLCEDTRVSKRLLHLLAQNPIISHSFPNIATKKREFIAFHSHNDQEFLNQI 79
+E L +V CEDTRV++ LL I T+ +A+H HN E ++
Sbjct: 1 METLASADVLACEDTRVTRILLERYG-----------IRTRP---LAYHEHNANEAGPKL 46
Query: 80 KPSF-FDKEIAVMSDAGMPSLSDPGMSLAAYALKHNIQYDVLPGANALTTAFCASGFLEG 138
+ K +A++SDAG P +SDPG L AL+ + +PGA+A A SG
Sbjct: 47 IAALEAGKSVALVSDAGTPLVSDPGYRLGQLALEAGHRVVPVPGASAPLAALVGSGMPSD 106
Query: 139 RFFYAGFLPHKSKERRLKIAKILNALAYLEEKTPVVFYESPHRLLETLKDLND-LAKGMH 197
F +AGFLP K + +R + A + A L +F+ESP R+ +LK ++ L +
Sbjct: 107 AFLFAGFLPVKDRGKRDRFAGLAKIPATL------IFFESPRRIGASLKVASEVLGRDRR 160
Query: 198 LFAAKELTKLHQQYYLGEVSQIIERLQ-QSTIQGEWVLVLLNEK-----KIEPCMGLSAL 251
+ELTK +++ G + ++ + ++GE VL++ IE L
Sbjct: 161 AVVCRELTKTFEEFRRGTLGELADYYDGDRVVKGEIVLLVEPPSYDEIPDIEDVEKLLKD 220
Query: 252 LELDLPPKIKAKIEAVMTQKNAKELYFQRLLEEKN 286
L + A A +T KELY QRLL+ K+
Sbjct: 221 LVATMSAAKAAGEAAKLTGLPRKELY-QRLLDMKD 254
>ref|NP_301265.1| (NC_002677) conserved hypothetical protein [Mycobacterium leprae]
emb|CAC29701.1| (AL583917) conserved hypothetical protein [Mycobacterium leprae]
Length = 281
Score = 87.4 bits (215), Expect = 2e-16
Identities = 61/214 (28%), Positives = 94/214 (43%), Gaps = 18/214 (8%)
Query: 7 TPIGNLADITLRALEVLERCEVFLCEDTRVSKRLLHLLAQNPIISHSFPNIATKKREFIA 66
TP+G D + R + L +V EDTR ++ L L + R
Sbjct: 11 TPLGQPLDASRRLTDALCCADVVAAEDTRRARTLAKTLG-----------VVITGRVISL 59
Query: 67 FHSHNDQEFLNQIKPSFFDKEIAVMSDAGMPSLSDPGMSLAAYALKHNIQYDVLPGANAL 126
F + + V+SDAGM +SDPG L A + + LPG +A+
Sbjct: 60 FDQIEAVRVSALVAEIEAGATVLVISDAGMSVISDPGYRLVAACIAAGLPVRCLPGPSAV 119
Query: 127 TTAFCASGFLEGRFFYAGFLPHKSKERRLKIAKILNALAYLEEKTPVVFYESPHRLLETL 186
TA SG +F + GF P KS RR +A + +E+ VF+ESP RL L
Sbjct: 120 MTALAVSGLSSEKFCFEGFAPRKSSARRTWLASL------ADERRTCVFFESPRRLAACL 173
Query: 187 KD-LNDLAKGMHLFAAKELTKLHQQYYLGEVSQI 219
+D ++ L + +ELTK+H++ G + ++
Sbjct: 174 RDAVDQLGSARPVVVCRELTKVHEEVVRGSLDEL 207
>gb|AAF69573.1|AC022473_9 (AC022473) L354.10 [Leishmania major]
Length = 461
Score = 86.7 bits (213), Expect = 3e-16
Identities = 74/273 (27%), Positives = 121/273 (44%), Gaps = 57/273 (20%)
Query: 2 LYFLPTPIGNLADITLRALEVLERCEVFLCEDTRVSKRLLHLLA---QNPIISHSFPNIA 58
L+ + PIGNL D +LRAL+VL + + D +K LL L+ Q +I +S N +
Sbjct: 91 LHVVSVPIGNLKDFSLRALDVLRGVDYIITTDRPATKTLLDLVNIPNQGRLIHYSRGNRS 150
Query: 59 TKKREFIAFHSHNDQEFLNQIKPSFFDKEIAVMSDAGMPSLSDPGMSLAAYALKHNIQYD 118
T + + + E L + +A+++ +G P + D G L K I+
Sbjct: 151 TSREKLV--------ELLKG------GRSMALVTTSGTPCIGDVGGELVQELQKSGIRVT 196
Query: 119 VLPGANALTTAFCASG------------------------------FLEGRFFYAGFLPH 148
+PGA+AL +A SG F +G FF+ LP
Sbjct: 197 AVPGASALMSALAISGLTTSAYESAKNDKRGADAAADGEAGLSPQTFEDGSFFFGNVLP- 255
Query: 149 KSKERRLKIAKILNALAYLEEKTPVVFYESPHRLLETLKDLNDLAKGMHLFAAKELTKLH 208
KS RL+I + + A A P VFYE P+RL+ L+D+ + ++ ELTKL+
Sbjct: 256 KSHGARLRILRTIVAPATF----PCVFYEVPYRLVMVLQDIASVLPHRFVYVTHELTKLN 311
Query: 209 QQYYLGEVSQII-----ERLQQSTIQGEWVLVL 236
+ + +++ + Q +G+ VLV+
Sbjct: 312 ESLHADTAERLVGFYLRQEAQMLVKKGQLVLVI 344
>ref|NP_335468.1| (NC_002755) tetrapyrrole methylase family protein [Mycobacterium
tuberculosis CDC1551]
gb|AAK45282.1| (AE006986) tetrapyrrole methylase family protein [Mycobacterium
tuberculosis CDC1551]
Length = 285
Score = 86.7 bits (213), Expect = 3e-16
Identities = 64/214 (29%), Positives = 94/214 (43%), Gaps = 18/214 (8%)
Query: 7 TPIGNLADITLRALEVLERCEVFLCEDTRVSKRLLHLLAQNPIISHSFPNIATKKREFIA 66
TP+G +D + R L +V EDTR ++L L +I R
Sbjct: 11 TPLGQPSDASPRLAAALATADVVAAEDTRRVRKLAKAL-----------DIRIGGRVVSL 59
Query: 67 FHSHNDQEFLNQIKPSFFDKEIAVMSDAGMPSLSDPGMSLAAYALKHNIQYDVLPGANAL 126
F + + V+SDAG P +SDPG L A + + LPG +A+
Sbjct: 60 FDRVEALRVTALLDAINNGATVLVVSDAGTPVISDPGYRLVAACIDAGVSVTCLPGPSAV 119
Query: 127 TTAFCASGFLEGRFFYAGFLPHKSKERRLKIAKILNALAYLEEKTPVVFYESPHRLLETL 186
TTA SG +F + GF P K RR +A++ EE+ VF+ESP RL L
Sbjct: 120 TTALVISGLPAEKFCFEGFAPRKGAARRAWLAEL------AEERRTCVFFESPRRLAACL 173
Query: 187 KDLNDLAKGMHLFA-AKELTKLHQQYYLGEVSQI 219
D + G A +ELTK+H++ G + ++
Sbjct: 174 NDAVEQLGGARPAAICRELTKVHEEVVRGSLDEL 207
>ref|NP_215519.1| (NC_000962) hypothetical protein Rv1003 [Mycobacterium tuberculosis
H37Rv]
sp|O05588|YA03_MYCTU Hypothetical protein Rv1003
pir||F70602 hypothetical protein Rv1003 - Mycobacterium tuberculosis (strain
H37RV)
emb|CAB08145.1| (Z94752) hypothetical protein Rv1003 [Mycobacterium tuberculosis
H37Rv]
Length = 285
Score = 86.7 bits (213), Expect = 3e-16
Identities = 64/214 (29%), Positives = 94/214 (43%), Gaps = 18/214 (8%)
Query: 7 TPIGNLADITLRALEVLERCEVFLCEDTRVSKRLLHLLAQNPIISHSFPNIATKKREFIA 66
TP+G +D + R L +V EDTR ++L L +I R
Sbjct: 11 TPLGQPSDASPRLAAALATADVVAAEDTRRVRKLAKAL-----------DIRIGGRVVSL 59
Query: 67 FHSHNDQEFLNQIKPSFFDKEIAVMSDAGMPSLSDPGMSLAAYALKHNIQYDVLPGANAL 126
F + + V+SDAG P +SDPG L A + + LPG +A+
Sbjct: 60 FDRVEALRVTALLDAINNGATVLVVSDAGTPVISDPGYRLVAACIDAGVSVTCLPGPSAV 119
Query: 127 TTAFCASGFLEGRFFYAGFLPHKSKERRLKIAKILNALAYLEEKTPVVFYESPHRLLETL 186
TTA SG +F + GF P K RR +A++ EE+ VF+ESP RL L
Sbjct: 120 TTALVMSGLPAEKFCFEGFAPRKGAARRAWLAEL------AEERRTCVFFESPRRLAACL 173
Query: 187 KDLNDLAKGMHLFA-AKELTKLHQQYYLGEVSQI 219
D + G A +ELTK+H++ G + ++
Sbjct: 174 NDAVEQLGGARPAAICRELTKVHEEVVRGSLDEL 207
>ref|NP_519166.1| (NC_003295) PROBABLE TRANSMEMBRANE PROTEIN [Ralstonia solanacearum]
emb|CAD14747.1| (AL646062) PROBABLE TRANSMEMBRANE PROTEIN [Ralstonia solanacearum]
Length = 243
Score = 67.0 bits (162), Expect = 2e-10
Identities = 60/220 (27%), Positives = 105/220 (47%), Gaps = 20/220 (9%)
Query: 2 LYFLPTPIGNLAD--------ITLRALEVLERCEVFLCEDTRVSKRLLHLLAQNPIISHS 53
LY +P +G L D I ++ R + F+ E + ++ LL LA+ ++H+
Sbjct: 5 LYLIPNTLG-LRDADDPLPEVIPAGVQQITARLDYFVAEHAKTARALLKKLAETAPLTHA 63
Query: 54 FPNIATKKREFIAFHSHNDQEFLNQIKPSFFDKEIAVMSDAGMPSLSDPGMSLAAYALKH 113
+I RE ++ E L + P ++ +MS+AG+P+++DPG +L A +H
Sbjct: 64 LQDITI--RELNVKTPESELEAL--LAPVVGGRDGGLMSEAGVPAVADPGANLVRLAHRH 119
Query: 114 NIQYDVLPGANALTTAFCASGFLEGRFFYAGFLPHKSKERRLKIAKILNALAYLEEKTPV 173
++ L G +++ A ASG F + G+LP + ER K+ + A +
Sbjct: 120 GVRVKPLVGPSSILLAVMASGLNGQSFAFNGYLPVDAGERVRKLRALEQASRAAGQTQ-- 177
Query: 174 VFYESPHR---LLETLKDLNDLAKGMHLFAAKELTKLHQQ 210
VF E+P+R LLE ++ + G L A +LT +Q
Sbjct: 178 VFIETPYRNGALLEAIQAA--CSPGTLLSVAVDLTLPSEQ 215
>ref|NP_283363.1| (NC_003116) hypothetical protein NMA0547 [Neisseria meningitidis
Z2491]
pir||C81973 hypothetical protein NMA0547 [imported] - Neisseria meningitidis
(group A strain Z2491)
emb|CAB83840.1| (AL162753) hypothetical protein NMA0547 [Neisseria meningitidis
Z2491]
Length = 241
Score = 66.2 bits (160), Expect = 4e-10
Identities = 63/234 (26%), Positives = 106/234 (44%), Gaps = 17/234 (7%)
Query: 1 MLYFLPTPIGNLADITLRALE--VLERCEVFLCEDTRVSK-RLLHLLAQNPIISHSFPNI 57
+LY +PTP+G L E + F+ E + ++ L HL PI
Sbjct: 9 VLYLIPTPLGTPDTPCLLPHEQQAIVGLTDFVVEAEKTARAHLKHLGVTMPI-------- 60
Query: 58 ATKKREFIAFHSHND-QEFLNQIKPSFFDKEIAVMSDAGMPSLSDPGMSLAAYALKHNIQ 116
++ + H D + L +KP + + ++S+AG P+++DPG +L A A KH +
Sbjct: 61 --RELNLQTLNEHTDLKTLLELLKPLQEGRSMGIVSEAGCPAVADPGANLVALAHKHGFE 118
Query: 117 YDVLPGANALTTAFCASGFLEGRFFYAGFLPHKSKERRLKIAKILNALAYLEEKTPVVFY 176
L G ++L A ASG F + G+LP K R++ K L + + +T +F
Sbjct: 119 VRPLVGPSSLLLALMASGANGQSFAFKGYLP-SEKNERIQSLKALEQRSRQQNETQ-LFI 176
Query: 177 ESPHRLLETLKD-LNDLAKGMHLFAAKELTKLHQQYYLGEVSQIIERLQQSTIQ 229
E+P+R L D + +L L A +LT Q+ V Q +R + ++
Sbjct: 177 ETPYRNDVLLADAVENLHSETRLCTATDLTLPTQEIISQTVVQWRKRKEMPNLK 230
>ref|NP_274902.1| (NC_003112) conserved hypothetical protein [Neisseria meningitidis
MC58]
pir||C81028 conserved hypothetical protein NMB1908 [imported] - Neisseria
meningitidis (group B strain MD58)
gb|AAF42238.1| (AE002540) conserved hypothetical protein [Neisseria meningitidis
MC58]
Length = 241
Score = 65.1 bits (157), Expect = 9e-10
Identities = 62/239 (25%), Positives = 107/239 (43%), Gaps = 27/239 (11%)
Query: 1 MLYFLPTPIGNLADITLRALE--VLERCEVFLCEDTRVSK-RLLHLLAQNPIISHSFPNI 57
+LY +PTP+G L E + F+ E + ++ L HL PI
Sbjct: 9 VLYLIPTPLGTPDTPCLLPHEQQAIVGLTDFVVEAEKTARAHLKHLGVTTPI-------- 60
Query: 58 ATKKREFIAFHSHNDQEFLNQI-KPSFFDKEIAVMSDAGMPSLSDPGMSLAAYALKHNIQ 116
++ + H D + L ++ KP + + ++S+AG P+++DPG +L A A KH +
Sbjct: 61 --RELNLQTLNEHTDLKTLPELLKPLQEGRSMGIVSEAGCPAVADPGANLVALAHKHGFE 118
Query: 117 YDVLPGANALTTAFCASGFLEGRFFYAGFLPHKSKERRLKIAKILNALAYLEEKT----- 171
L G ++L A ASG F + G+LP + ER + A LE+++
Sbjct: 119 VRPLVGPSSLLLALMASGANGQSFAFKGYLPSEKNER-------IQAFRALEQRSRQCGE 171
Query: 172 PVVFYESPHRLLETLKD-LNDLAKGMHLFAAKELTKLHQQYYLGEVSQIIERLQQSTIQ 229
+F E+P+R L D + +L L A +LT Q+ + Q +R + ++
Sbjct: 172 TQIFIETPYRNDALLADAVENLHPETRLCTATDLTLPTQEIISQTIVQWRKRKEMPNLK 230
>ref|NP_300439.1| (NC_002491) SAM-dependent methytransferase [Chlamydophila
pneumoniae J138]
ref|NP_444921.1| (NC_002179) tetrapyrrole methylase family protein [Chlamydophila
pneumoniae AR39]
gb|AAF73660.1| (AE002199) tetrapyrrole methylase family protein [Chlamydophila
pneumoniae AR39]
dbj|BAA98590.1| (AP002546) SAM-dependent methytransferase [Chlamydophila pneumoniae
J138]
Length = 238
Score = 63.2 bits (152), Expect = 3e-09
Identities = 66/238 (27%), Positives = 98/238 (40%), Gaps = 28/238 (11%)
Query: 2 LYFLPTPIGNLADITLRAL--EVLERCEVFLCEDTRVSKRLLHLLAQNPIISHSFPNIAT 59
LY LP +G A TL ++ E++ R + + E R + L L + H FP
Sbjct: 3 LYLLPNTLGTRAVETLPSVIGELVHRLDGLIVESDRGGRAFLSLWKIPEV--HKFPLAIL 60
Query: 60 KKREFIAFHSHNDQEFLNQIKPSFFDKEI-AVMSDAGMPSLSDPGMSLAAYALKHNIQYD 118
K H+ + + ++P E ++SDAG+P ++DPG SL A I
Sbjct: 61 SK------HARLPKAWDFYLEPIVKHGENWGLISDAGLPCIADPGASLVRRARALGIPVQ 114
Query: 119 VLPGANALTTAFCASGFLEGRFFYAGFLPHKSKERRLKIAKILNALAYLEEKTPVVFYES 178
G ++T A SG F + G+LP KER K + A +E + V E+
Sbjct: 115 AFSGPCSITLALMLSGLPSQSFTFLGYLPQSPKER----VKSIKKAATSKEVSTSVCIET 170
Query: 179 PHR-------LLETLKDLNDLAKGMHLFAAKELTKLHQQYY------LGEVSQIIERL 223
P+R LL+TL +L L EL Q LG V Q I ++
Sbjct: 171 PYRNVYTFESLLDTLPSYAELCVASDLSGPSELVLTRQVQSWRTTEDLGSVKQSITKV 228
>ref|NP_224582.1| (NC_000922) SAM-Dependent Methytransferase [Chlamydophila
pneumoniae CWL029]
pir||C72086 sam-dependent methytransferase - Chlamydophila pneumoniae (strain
CWL029)
gb|AAD18526.1| (AE001622) SAM-Dependent Methytransferase [Chlamydophila pneumoniae
CWL029]
Length = 238
Score = 60.1 bits (144), Expect = 3e-08
Identities = 65/238 (27%), Positives = 97/238 (40%), Gaps = 28/238 (11%)
Query: 2 LYFLPTPIGNLADITLRAL--EVLERCEVFLCEDTRVSKRLLHLLAQNPIISHSFPNIAT 59
LY LP +G A TL ++ E++ R + + E R + L L + H FP
Sbjct: 3 LYLLPNTLGTRAVETLPSVIGELVHRLDGLIVESDRGGRAFLSLWKIPEV--HKFPLAIL 60
Query: 60 KKREFIAFHSHNDQEFLNQIKPSFFDKEI-AVMSDAGMPSLSDPGMSLAAYALKHNIQYD 118
K H+ + + ++P E ++SDAG+P ++DPG SL A I
Sbjct: 61 SK------HARLPKAWDFYLEPIVKHGENWGLISDAGLPCIADPGASLVRRARALGIPVQ 114
Query: 119 VLPGANALTTAFCASGFLEGRFFYAGFLPHKSKERRLKIAKILNALAYLEEKTPVVFYES 178
G ++T A SG F + G+LP KER K + A +E + V E+
Sbjct: 115 AFSGPCSITLALMLSGLPSQSFTFLGYLPQSPKER----VKSIKKAATSKEVSTSVCIET 170
Query: 179 PHR-------LLETLKDLNDLAKGMHLFAAKELTKLHQQYY------LGEVSQIIERL 223
+R LL+TL +L L EL Q LG V Q I ++
Sbjct: 171 SYRNVYTFESLLDTLPSYAELCVASDLSGPSELVLTRQVQSWRTTEDLGSVKQSITKV 228
>ref|NP_219551.1| (NC_000117) SAM-dependent methyltransferase [Chlamydia trachomatis]
pir||F71563 probable sam-dependent methyltransferase - Chlamydia trachomatis
(serotype D, strain UW3/Cx)
gb|AAC67639.1| (AE001279) SAM-dependent methyltransferase [Chlamydia trachomatis]
Length = 237
Score = 48.9 bits (115), Expect = 6e-05
Identities = 59/242 (24%), Positives = 101/242 (41%), Gaps = 36/242 (14%)
Query: 2 LYFLPTPIGNLA--DITLRALEVLE-RCEVFLCEDTRVSKRLLHLL-AQNPIISHSFPNI 57
LY LP +G+ D+ E++ + + + E R + L L + P H FP
Sbjct: 3 LYLLPNTLGSKRSEDLPFSVGEIVRNKIQGLIVESDRGGRLFLSLWKVEEP---HRFP-- 57
Query: 58 ATKKREFIAFHSHNDQEFLN---QIKPSFFDKEI-AVMSDAGMPSLSDPGMSLAAYALKH 113
+A S ND ++P +E V+SDAG+P ++DPG L A
Sbjct: 58 -------LAVMSKNDTSVKACDFYLEPILKKQESWGVISDAGLPCIADPGAKLVRRARTL 110
Query: 114 NIQYDVLPGANALTTAFCASGFLEGRFFYAGFLPHKSKERRLKIAKILNALAYLEEKTPV 173
I + G ++T A SG F + G+LP KER ++ L + + +
Sbjct: 111 GIPVHAVSGPCSITQALMLSGLPGQNFTFHGYLPQNPKER----SRYLRSCS--GKSHTQ 164
Query: 174 VFYESPHR-------LLETLKDLNDLAKGMHLFAAKELTKLHQ---QYYLGEVSQIIERL 223
+ E+P+R LL+ L D +L + L +E + ++ ++ ERL
Sbjct: 165 ICIETPYRNPYTFDALLDQLPDHGELCVAIDLMGDQEYVSMRSIAVWNQSSDIEEVCERL 224
Query: 224 QQ 225
++
Sbjct: 225 KK 226
>ref|NP_296697.1| (NC_002620) conserved hypothetical protein [Chlamydia muridarum]
pir||A81716 conserved hypothetical protein TC0318 [imported] - Chlamydia
muridarum (strain Nigg)
gb|AAF39183.1| (AE002299) conserved hypothetical protein [Chlamydia muridarum]
Length = 237
Score = 47.8 bits (112), Expect = 1e-04
Identities = 45/160 (28%), Positives = 70/160 (43%), Gaps = 20/160 (12%)
Query: 2 LYFLPTPIGN--LADITLRALEVLE-RCEVFLCEDTRVSKRLLHLL-AQNPIISHSFPNI 57
LY LP +GN + D+ E++ + + + E R + L L ++P H FP
Sbjct: 3 LYLLPNTLGNKRVEDLPSIVGEIVRNKIQGLIVESDRGGRLFLSLWKVKDP---HKFP-- 57
Query: 58 ATKKREFIAFHSHNDQEFLN---QIKPSFFDKEI-AVMSDAGMPSLSDPGMSLAAYALKH 113
+A S ND ++P E V+SDAG+P ++DPG+ L A
Sbjct: 58 -------LAVMSKNDTSVKACDFYLEPIIKKGESWGVISDAGLPCIADPGVRLVQRARSL 110
Query: 114 NIQYDVLPGANALTTAFCASGFLEGRFFYAGFLPHKSKER 153
+ + G ++T A SG F + G+LP KER
Sbjct: 111 GVPVQAVAGPCSITQALMLSGLPGQNFTFHGYLPQNPKER 150
Database: /home/scwang/download_20020708_db/nr
Posted date: Aug 7, 2002 12:55 PM
Number of letters in database: 324,149,939
Number of sequences in database: 1,026,957
Lambda K H
0.321 0.137 0.393
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 170,699,111
Number of Sequences: 1026957
Number of extensions: 6644134
Number of successful extensions: 23767
Number of sequences better than 1.0e-02: 73
Number of HSP's better than 0.0 without gapping: 72
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 23542
Number of HSP's gapped (non-prelim): 78
length of query: 287
length of database: 324,149,939
effective HSP length: 120
effective length of query: 167
effective length of database: 200,915,099
effective search space: 33552821533
effective search space used: 33552821533
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 97 (42.0 bits)