BLASTP 2.2.1 [Apr-13-2001]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|15645343|ref|NP_207515.1| hypothetical protein
[Helicobacter pylori 26695]
(152 letters)
Database: /home/scwang/download_20020708_db/nr
1,026,957 sequences; 324,149,939 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_207515.1| (NC_000915) hypothetical protein [Helicoba... 317 3e-86
ref|NP_223376.1| (NC_000921) putative [Helicobacter pylori ... 315 1e-85
ref|NP_222839.1| (NC_000921) putative [Helicobacter pylori ... 67 5e-11
ref|NP_206929.1| (NC_000915) hypothetical protein [Helicoba... 65 2e-10
ref|NP_223375.1| (NC_000921) putative [Helicobacter pylori ... 61 3e-09
ref|NP_207513.1| (NC_000915) hypothetical protein [Helicoba... 53 1e-06
gb|AAC08991.1| (AF053125) putative adhesin B precursor FimA... 49 2e-05
ref|NP_438291.1| (NC_000907) conserved hypothetical protein... 49 2e-05
gb|AAA29595.1| (L27591) erythrocyte membrane antigen 1 [Pla... 47 5e-05
gb|AAA29593.1| (L27589) 49 kDa [Plasmodium chabaudi] 47 5e-05
ref|NP_473179.1| (NC_000521) predicted using hexExon; MAL3P... 46 1e-04
ref|NP_504775.1| (NM_072374) C33G8.2.p [Caenorhabditis eleg... 45 2e-04
ref|NP_245863.1| (NC_002663) FimA [Pasteurella multocida] >... 44 5e-04
ref|NP_524931.1| (NM_080192) Catecholamines up [Drosophila ... 44 5e-04
gb|AAF73890.2|AF223972_1 (AF223972) non-classical Kazal typ... 44 7e-04
dbj|BAA95789.1| (AB009883) KED [Nicotiana tabacum] 44 7e-04
ref|NP_189551.1| (NM_113830) hypothetical protein [Arabidop... 43 0.001
ref|NP_420993.1| (NC_002696) hypothetical protein [Caulobac... 43 0.001
ref|NP_473250.1| (NC_000521) predicted using hexExon; MAL3P... 43 0.001
emb|CAA15592.2| (AL008970) hypothetical protein, PFC0570c [... 43 0.001
gb|AAL25646.1|AF197329_1 (AF197329) zinc transporter [Eucal... 42 0.002
ref|NP_500745.1| (NM_068344) Y59E9AL.6.p [Caenorhabditis el... 42 0.002
ref|NP_473064.1| (NC_000910) hypothetical protein [Plasmodi... 42 0.002
ref|NP_356155.1| (NC_003063) AGR_L_732p [Agrobacterium tume... 42 0.002
gb|AAB93453.2| (U28739) Hypothetical protein C17G10.6 [Caen... 42 0.003
sp|P08016|EGGS_SCHMA PUTATIVE EGGSHELL PROTEIN >gi|627089|p... 42 0.003
ref|NP_495089.1| (NM_062688) C17G10.6.p [Caenorhabditis ele... 42 0.003
ref|NP_510563.1| (NM_078162) H13N06.5.p [Caenorhabditis ele... 42 0.003
ref|NP_491919.1| (NM_059518) T23B3.5.p [Caenorhabditis eleg... 42 0.003
ref|NP_499564.1| (NM_067163) Y56A3A.32.p [Caenorhabditis el... 42 0.003
gb|AAA29908.1| (M74170) p48 eggshell protein [Schistosoma m... 42 0.003
ref|NP_619243.1| (NC_003552) hypothetical protein (multi-do... 41 0.004
ref|NP_492424.1| (NM_060023) Zinc finger, C3HC4 type (RING ... 41 0.004
gb|AAL91692.1|AF420240_1 (AF420240) merozoite surface prote... 41 0.004
pir||T21861 hypothetical protein F36F2.3 - Caenorhabditis e... 41 0.004
gb|AAK82653.1|AF162859_1 (AF162859) adsorption protein pIII... 41 0.005
gb|AAC47848.1| (AF030694) O1 [Plasmodium falciparum] 41 0.005
gb|EAA11042.1| (AAAB01008960) agCP6338 [Anopheles gambiae s... 41 0.005
ref|NP_485136.1| (NC_003272) hypothetical protein [Nostoc s... 40 0.006
gb|AAA74210.1| (L43851) surface antigen [Pneumocystis carinii] 40 0.008
gb|AAF22235.1|AF152557_1 (AF152557) histidine and aspartic ... 40 0.008
sp|Q45257|HYPB_BRAJA Hydrogenase nickel incorporation prote... 40 0.008
ref|NP_386976.1| (NC_003047) CONSERVED HYPOTHETICAL PROTEIN... 40 0.008
gb|AAA29596.1| (L27592) erythrocyte membrane antigen 1 [Pla... 40 0.008
ref|NP_371201.1| (NC_002758) conserved hypothetical protein... 40 0.008
ref|NP_310939.1| (NC_002695) hypothetical protein [Escheric... 40 0.008
gb|EAA12358.1| (AAAB01008964) agCP11106 [Anopheles gambiae ... 40 0.008
>ref|NP_207515.1| (NC_000915) hypothetical protein [Helicobacter pylori 26695]
pir||A64610 hypothetical protein HP0721 - Helicobacter pylori (strain 26695)
gb|AAD07777.1| (AE000585) H. pylori predicted coding region HP0721 [Helicobacter
pylori 26695]
Length = 152
Score = 317 bits (812), Expect = 3e-86
Identities = 152/152 (100%), Positives = 152/152 (100%)
Query: 1 MKKALKILSVSALLFVALNAKDFSKTSDEDLAKMAGVVAPQDIVDYTKELKKRMEKMPED 60
MKKALKILSVSALLFVALNAKDFSKTSDEDLAKMAGVVAPQDIVDYTKELKKRMEKMPED
Sbjct: 1 MKKALKILSVSALLFVALNAKDFSKTSDEDLAKMAGVVAPQDIVDYTKELKKRMEKMPED 60
Query: 61 KRKAFHKQLHEYATKNTDKMTVADFEARQKAVKEALKKGNMEDMDDDFGLRSCKHGKKHK 120
KRKAFHKQLHEYATKNTDKMTVADFEARQKAVKEALKKGNMEDMDDDFGLRSCKHGKKHK
Sbjct: 61 KRKAFHKQLHEYATKNTDKMTVADFEARQKAVKEALKKGNMEDMDDDFGLRSCKHGKKHK 120
Query: 121 HDKHGKKHGKKHDKDHDDKDHDHHDEDHSDKH 152
HDKHGKKHGKKHDKDHDDKDHDHHDEDHSDKH
Sbjct: 121 HDKHGKKHGKKHDKDHDDKDHDHHDEDHSDKH 152
>ref|NP_223376.1| (NC_000921) putative [Helicobacter pylori J99]
pir||A71904 hypothetical protein jhp0658 - Helicobacter pylori (strain J99)
gb|AAD06236.1| (AE001498) putative [Helicobacter pylori J99]
Length = 152
Score = 315 bits (807), Expect = 1e-85
Identities = 150/152 (98%), Positives = 151/152 (98%)
Query: 1 MKKALKILSVSALLFVALNAKDFSKTSDEDLAKMAGVVAPQDIVDYTKELKKRMEKMPED 60
MKKALKILSV ALLFVALNAKDFSKTSDEDLAKMAGVVAPQDIVDYTKELKKRMEKMPED
Sbjct: 1 MKKALKILSVGALLFVALNAKDFSKTSDEDLAKMAGVVAPQDIVDYTKELKKRMEKMPED 60
Query: 61 KRKAFHKQLHEYATKNTDKMTVADFEARQKAVKEALKKGNMEDMDDDFGLRSCKHGKKHK 120
KRKAFHKQLHEYATKNTDKMTVADFEARQKA+KEALKKGNMEDMDDDFGLRSCKHGKKHK
Sbjct: 61 KRKAFHKQLHEYATKNTDKMTVADFEARQKAIKEALKKGNMEDMDDDFGLRSCKHGKKHK 120
Query: 121 HDKHGKKHGKKHDKDHDDKDHDHHDEDHSDKH 152
HDKHGKKHGKKHDKDHDDKDHDHHDEDHSDKH
Sbjct: 121 HDKHGKKHGKKHDKDHDDKDHDHHDEDHSDKH 152
>ref|NP_222839.1| (NC_000921) putative [Helicobacter pylori J99]
pir||H71970 hypothetical protein jhp0118 - Helicobacter pylori (strain J99)
gb|AAD05707.1| (AE001451) putative [Helicobacter pylori J99]
Length = 143
Score = 67.4 bits (163), Expect = 5e-11
Identities = 43/136 (31%), Positives = 68/136 (49%), Gaps = 7/136 (5%)
Query: 2 KKALKILSVSALLFVALNAKDFSKTSDEDLAKMAGVVAPQDIVDYTKELKKRMEKMPEDK 61
K A +L L + LNA DF ++ L + AG VAP ++ ++ E+ KR+E M E++
Sbjct: 3 KLAFSLLFTGTFLGLFLNASDFKSMDNKQLLEQAGKVAPSEVPEFRTEVNKRLEAMKEEE 62
Query: 62 RKAFHKQLHEYATKNTDKMTVADFEARQKAVKEAL--KKGNM---EDMDDDFGLRSCK-H 115
R+ + + KN ++ D R+K + E + KK M E ++ L C
Sbjct: 63 RQKYKADFKKAMDKNLASLSQEDRNKRKKEILEVIANKKKTMTMKEYREEGLDLHDCACE 122
Query: 116 GKKHKHDKHGKKHGKK 131
G H H+K G+K GKK
Sbjct: 123 GPFHDHEKKGQK-GKK 137
>ref|NP_206929.1| (NC_000915) hypothetical protein [Helicobacter pylori 26695]
pir||A64536 hypothetical protein HP0129 - Helicobacter pylori (strain 26695)
gb|AAD07198.1| (AE000534) H. pylori predicted coding region HP0129 [Helicobacter
pylori 26695]
Length = 141
Score = 65.1 bits (157), Expect = 2e-10
Identities = 43/139 (30%), Positives = 64/139 (45%), Gaps = 16/139 (11%)
Query: 2 KKALKILSVSALLFVALNAKDFSKTSDEDLAKMAGVVAPQDIVDYTKELKKRMEKMPEDK 61
K A+ +L L + LNA DF D+ L + AG VAP ++ ++ E+ KR+ M E+
Sbjct: 3 KLAVSLLFTGTFLGLFLNASDFKSMDDKQLLEQAGKVAPSEVPEFRAEVNKRLAVMKEED 62
Query: 62 RKAFHKQLHEYATKNTDKMTVADFEARQKAVKEAL--KKGNM---EDMDDDFGLRSC--- 113
RK + + KN ++ D R+K + EA+ KK M E ++ L C
Sbjct: 63 RKNYKADFKKAMDKNLASLSQEDRNKRKKEILEAIANKKKTMTMKEYREEGLDLHDCACE 122
Query: 114 --------KHGKKHKHDKH 124
K GKK H KH
Sbjct: 123 GPFHDHERKKGKKPSHHKH 141
>ref|NP_223375.1| (NC_000921) putative [Helicobacter pylori J99]
pir||H71903 hypothetical protein jhp0657 - Helicobacter pylori (strain J99)
gb|AAD06242.1| (AE001498) putative [Helicobacter pylori J99]
Length = 140
Score = 61.2 bits (147), Expect = 3e-09
Identities = 29/98 (29%), Positives = 55/98 (55%)
Query: 1 MKKALKILSVSALLFVALNAKDFSKTSDEDLAKMAGVVAPQDIVDYTKELKKRMEKMPED 60
M+++L ++ L L A+DFS+ +E+L K+AG + + +DY E+ KR++ + +
Sbjct: 1 MRRSLAFCLLALLGLQVLGARDFSQLKNEELLKLAGTLPSNEAIDYRMEVSKRLKALSAE 60
Query: 61 KRKAFHKQLHEYATKNTDKMTVADFEARQKAVKEALKK 98
K F A KN KM+ DF+ ++ V++ L++
Sbjct: 61 DAKKFRANFSRIARKNLSKMSEEDFKKMREEVRKELEE 98
>ref|NP_207513.1| (NC_000915) hypothetical protein [Helicobacter pylori 26695]
pir||G64609 hypothetical protein HP0719 - Helicobacter pylori (strain 26695)
gb|AAD07775.1| (AE000585) H. pylori predicted coding region HP0719 [Helicobacter
pylori 26695]
Length = 109
Score = 52.8 bits (125), Expect = 1e-06
Identities = 25/81 (30%), Positives = 44/81 (53%)
Query: 1 MKKALKILSVSALLFVALNAKDFSKTSDEDLAKMAGVVAPQDIVDYTKELKKRMEKMPED 60
M+++L ++ L L A+DFS+ +E+L K+AG + + +DY E+ KR++ + +
Sbjct: 22 MRRSLAFYLLALLGLQVLGARDFSQLKNEELLKLAGTLPSNEAIDYRMEVSKRLKTLNAE 81
Query: 61 KRKAFHKQLHEYATKNTDKMT 81
K F A KN KM+
Sbjct: 82 DAKKFRANFSRIARKNLSKMS 102
>gb|AAC08991.1| (AF053125) putative adhesin B precursor FimA [Haemophilus
influenzae]
Length = 311
Score = 48.9 bits (115), Expect = 2e-05
Identities = 29/72 (40%), Positives = 37/72 (51%), Gaps = 9/72 (12%)
Query: 80 MTVADFEARQKAVKEALKKGNMEDMDDDFGLRSCKHGKKHKHD-KHGKKHGKKHDKDHDD 138
+T+AD VK L K + E +D G H +HKHD KH KH KH+ HD
Sbjct: 75 ITIADLAD----VKPLLSKAHHEHFHED-GDHDHDHKDEHKHDHKHDHKHEHKHEHKHD- 128
Query: 139 KDHDHHDEDHSD 150
H+HHD DH +
Sbjct: 129 --HEHHDHDHHE 138
>ref|NP_438291.1| (NC_000907) conserved hypothetical protein [Haemophilus influenzae
Rd]
sp|P44526|ZNUA_HAEIN High-affinity zinc uptake system protein znuA precursor
pir||D64049 adhesin homolog HI0119 - Haemophilus influenzae (strain Rd KW20)
gb|AAC21794.1| (U32698) conserved hypothetical protein [Haemophilus influenzae Rd]
Length = 337
Score = 48.5 bits (114), Expect = 2e-05
Identities = 49/174 (28%), Positives = 70/174 (40%), Gaps = 34/174 (19%)
Query: 1 MKKALKILSVSALLFVA-----------LNAKDFSKTSDEDLAKMAGVVAPQDIVDYTKE 49
MKK LKI ++SA L A + F +S D V+ P +
Sbjct: 1 MKKLLKISAISAALLSAPMMANADVLASVKPLGFIVSSIADGVTGTQVLVPAGASPHDYN 60
Query: 50 LK-KRMEKMP---------EDKRKAFHKQLHEYATKNTDKMTVADFEARQKAVKEALKKG 99
LK ++K+ ED K + + K +T+AD + + +A +
Sbjct: 61 LKLSDIQKVKSADLVVWIGEDIDSFLDKPISQIERKKV--ITIADLADVKPLLSKAHHEH 118
Query: 100 NMEDMDDDFGLRSCKHGKKHKHDKHGKKHGKKHDKDHDDK---DHDHHDEDHSD 150
ED D D H KH+H KH KH HD DH + DH+HHD DH +
Sbjct: 119 FHEDGDHD-------HDHKHEH-KHDHKHDHDHDHDHKHEHKHDHEHHDHDHHE 164
>gb|AAA29595.1| (L27591) erythrocyte membrane antigen 1 [Plasmodium chabaudi]
Length = 444
Score = 47.4 bits (111), Expect = 5e-05
Identities = 24/76 (31%), Positives = 39/76 (50%)
Query: 75 KNTDKMTVADFEARQKAVKEALKKGNMEDMDDDFGLRSCKHGKKHKHDKHGKKHGKKHDK 134
+N D +++ D+E +E +KKGN + D + G + GKK K KK K+ ++
Sbjct: 353 ENADNLSLIDYEENSNENQENVKKGNETEGDSEDGEEGEQKGKKKGKKKGKKKVKKEGEE 412
Query: 135 DHDDKDHDHHDEDHSD 150
+ DD D D E S+
Sbjct: 413 ESDDDDEDEESESESE 428
>gb|AAA29593.1| (L27589) 49 kDa [Plasmodium chabaudi]
Length = 444
Score = 47.4 bits (111), Expect = 5e-05
Identities = 24/76 (31%), Positives = 39/76 (50%)
Query: 75 KNTDKMTVADFEARQKAVKEALKKGNMEDMDDDFGLRSCKHGKKHKHDKHGKKHGKKHDK 134
+N D +++ D+E +E +KKGN + D + G + GKK K KK K+ ++
Sbjct: 353 ENADNLSLIDYEENSNENQENVKKGNETEGDSEDGEEGEQKGKKKGKKKGKKKVKKEGEE 412
Query: 135 DHDDKDHDHHDEDHSD 150
+ DD D D E S+
Sbjct: 413 ESDDDDEDEESESESE 428
>ref|NP_473179.1| (NC_000521) predicted using hexExon; MAL3P2.15 (PFC0230c),
Hypothetical protein len: 3979 aa [Plasmodium
falciparum]
emb|CAB39002.1| (AL034558) hypothetical protein, PFC0230c [Plasmodium falciparum
3D7]
Length = 3978
Score = 46.2 bits (108), Expect = 1e-04
Identities = 33/114 (28%), Positives = 53/114 (45%), Gaps = 22/114 (19%)
Query: 46 YTKELKKRMEKMPEDKRKAFHKQLHEYATKNTDKMTVADFEARQKAVKEALKKGNMEDMD 105
+T LK++ +K RK + LH TK + TV DF +K N +
Sbjct: 836 FTSNLKEKRKK-----RKMNKEPLHATVTKKKKRPTVIDF---------LNEKWNRNSYN 881
Query: 106 DDFGLRSCKH-GKKHKHDKHG-------KKHGKKHDKDHDDKDHDHHDEDHSDK 151
DD +S KK + K+G KK+G D+++ + DHD+HD D +++
Sbjct: 882 DDISNKSVDSITKKEEEKKYGYYKDEEKKKYGYYKDEENHNSDHDYHDNDENEE 935
>ref|NP_504775.1| (NM_072374) C33G8.2.p [Caenorhabditis elegans]
pir||T34137 hypothetical protein C33G8.2 - Caenorhabditis elegans
gb|AAC25848.1| (U53154) Hypothetical protein C33G8.2 [Caenorhabditis elegans]
Length = 390
Score = 45.4 bits (106), Expect = 2e-04
Identities = 35/105 (33%), Positives = 51/105 (48%), Gaps = 11/105 (10%)
Query: 48 KELKKRMEKMPEDKRKAFHKQLHEYATKNTDKMTVADFEARQKAVKEALKKGNMEDMDDD 107
K+++ + ++ EDK+K + E K DK D E ++ K+ KK D DD+
Sbjct: 123 KQMRDKKKQEEEDKKK----EEEEKDKKKKDKKKEEDDEEEEQ--KDKKKKDEKNDDDDE 176
Query: 108 FGLRSCKHGKKHKHDKHGK-KHGKKHDKDHDDKDHDHHDEDHSDK 151
+ K KK +D+ K K KK DK DD D DED +DK
Sbjct: 177 EDKKKDKKKKKDDNDEEEKEKDKKKKDKKKDDDD----DEDENDK 217
Score = 41.6 bits (96), Expect = 0.003
Identities = 32/103 (31%), Positives = 47/103 (45%), Gaps = 4/103 (3%)
Query: 45 DYTKELKKRMEKMPEDKRKAFHKQLHEYATKNTDKMTVADFEARQKAVKEALKKGNMEDM 104
D ++ KK+ +K +D ++ E K DK D E +K K+ KK + +D
Sbjct: 231 DENEDDKKKDKKKKKDDKEKDDDDEEEKDKKKKDKKKNDDDEEDKKKDKKK-KKDDDDDE 289
Query: 105 DDDFGLRSCKHGKKHKHDKHGKKHGKKHDKDHDDKDHDHHDED 147
D+D K KK K DK + K+ DK DK D D+D
Sbjct: 290 DED---NKKKDKKKKKDDKDDEDEEKEKDKKKKDKKKDDDDDD 329
Score = 41.2 bits (95), Expect = 0.004
Identities = 31/114 (27%), Positives = 46/114 (40%), Gaps = 10/114 (8%)
Query: 48 KELKKRMEKMPEDKRKAFHKQLHEYATKNTDKMTVADFEARQKAV----------KEALK 97
K+ KK+ EK +D + K + N ++ D + + K K+ K
Sbjct: 162 KDKKKKDEKNDDDDEEDKKKDKKKKKDDNDEEEKEKDKKKKDKKKDDDDDEDENDKKKDK 221
Query: 98 KGNMEDMDDDFGLRSCKHGKKHKHDKHGKKHGKKHDKDHDDKDHDHHDEDHSDK 151
K +D DDD K KK K D K + +KD KD +D+D DK
Sbjct: 222 KKKKDDKDDDENEDDKKKDKKKKKDDKEKDDDDEEEKDKKKKDKKKNDDDEEDK 275
Score = 40.0 bits (92), Expect = 0.008
Identities = 28/105 (26%), Positives = 50/105 (46%), Gaps = 1/105 (0%)
Query: 48 KELKKRMEKMPEDKRKAFHKQLHEYATKNTDKMTVADFEARQKAVKEALKKGNMEDMDDD 107
K+ KK+ +K +D + + + + K DK + + ++K K+ +D D++
Sbjct: 197 KDKKKKDKKKDDDDDEDENDKKKDKKKKKDDKDDDENEDDKKKDKKKKKDDKEKDDDDEE 256
Query: 108 FGLRSCKHGKKHKHDKHGKKHGKKHDKD-HDDKDHDHHDEDHSDK 151
+ K KK+ D+ KK KK KD DD+D D+ +D K
Sbjct: 257 EKDKKKKDKKKNDDDEEDKKKDKKKKKDDDDDEDEDNKKKDKKKK 301
>ref|NP_245863.1| (NC_002663) FimA [Pasteurella multocida]
gb|AAK03010.1| (AE006132) FimA [Pasteurella multocida]
Length = 366
Score = 43.9 bits (102), Expect = 5e-04
Identities = 22/40 (55%), Positives = 23/40 (57%), Gaps = 3/40 (7%)
Query: 114 KHGKKHKHDKHGKKHGKKHDKDHDDKDHDH-HDEDHSDKH 152
KH HKHD H KH H DHD K HDH H DH+ KH
Sbjct: 136 KHDHDHKHD-HDHKHEHDHKHDHDHK-HDHDHKHDHAHKH 173
Score = 43.5 bits (101), Expect = 7e-04
Identities = 21/40 (52%), Positives = 23/40 (57%), Gaps = 3/40 (7%)
Query: 115 HGKKHKHDKHGKKHGKKHDKDHDDK-DHDH-HDEDHSDKH 152
H KH+HD H KH H DHD K DHDH H+ DH H
Sbjct: 119 HDHKHEHD-HTHKHDHDHKHDHDHKHDHDHKHEHDHKHDH 157
Score = 43.5 bits (101), Expect = 7e-04
Identities = 21/41 (51%), Positives = 23/41 (55%), Gaps = 3/41 (7%)
Query: 114 KHGKKHKHDKHGKKHGKKHDKDHDDK-DHDH-HDEDHSDKH 152
+H HKHD H KH H DHD K +HDH HD DH H
Sbjct: 124 EHDHTHKHD-HDHKHDHDHKHDHDHKHEHDHKHDHDHKHDH 163
Score = 41.2 bits (95), Expect = 0.004
Identities = 20/41 (48%), Positives = 23/41 (55%), Gaps = 3/41 (7%)
Query: 114 KHGKKHKHDKHGKKHGKKHDKDHDDK-DHDH-HDEDHSDKH 152
KH HKHD H KH H +HD K DH+H HD H +H
Sbjct: 154 KHDHDHKHD-HDHKHDHAHKHEHDHKHDHEHKHDHAHGHEH 193
Score = 40.4 bits (93), Expect = 0.006
Identities = 20/38 (52%), Positives = 22/38 (57%), Gaps = 3/38 (7%)
Query: 116 GKKHKHDKHGKKHGKKHDKDHDDKDHDH-HDEDHSDKH 152
G+ H H KH H KHD DH DHDH HD DH +H
Sbjct: 116 GEAHDH-KHEHDHTHKHDHDH-KHDHDHKHDHDHKHEH 151
>ref|NP_524931.1| (NM_080192) Catecholamines up [Drosophila melanogaster]
sp|Q9V3A4|CSUP_DROME Catecholamines up protein
gb|AAF37226.1|AF216584_1 (AF216584) seven transmembrane protein Catecholamines up
[Drosophila melanogaster]
gb|AAF53744.1| (AE003661) Catsup gene product [Drosophila melanogaster]
gb|AAL13757.1| (AY058528) LD23513p [Drosophila melanogaster]
Length = 449
Score = 43.9 bits (102), Expect = 5e-04
Identities = 23/53 (43%), Positives = 25/53 (46%), Gaps = 5/53 (9%)
Query: 103 DMDDDFGLRSCKHGKKHKHDKHGKKHGKKH---DKDHDDKDHDHHDEDHSDKH 152
D D D G H H HD HG HG H D DH D DH HH H ++H
Sbjct: 69 DHDHDHGHHHHGHDHDHDHD-HGHDHGHHHHGHDHDH-DHDHGHHHHGHDERH 119
>gb|AAF73890.2|AF223972_1 (AF223972) non-classical Kazal type inhibitor bdellin-KL [Hirudo
nipponia]
gb|AAK58688.1|AF272790_1 (AF272790) protease inhibitor bdellin-KL [Hirudo nipponia]
Length = 155
Score = 43.5 bits (101), Expect = 7e-04
Identities = 22/59 (37%), Positives = 29/59 (48%), Gaps = 2/59 (3%)
Query: 94 EALKKGNMEDMDD--DFGLRSCKHGKKHKHDKHGKKHGKKHDKDHDDKDHDHHDEDHSD 150
E K+ E DD D G G++HK + H + H H++ HDD D H EDH D
Sbjct: 73 EEHKEEGHEGHDDHHDDGHEEHHEGEEHKDEHHEEGHDDHHEEGHDDHHDDEHKEDHHD 131
>dbj|BAA95789.1| (AB009883) KED [Nicotiana tabacum]
Length = 513
Score = 43.5 bits (101), Expect = 7e-04
Identities = 34/135 (25%), Positives = 57/135 (42%), Gaps = 7/135 (5%)
Query: 25 KTSDEDLAKMAGVVAPQDIVDYTKELKKRMEKMPEDKRKAFHKQLHEYATK-NTDKMTVA 83
K + E+ K G + + E K E ED+R+ ++ E K + +K
Sbjct: 184 KKNKEEKGKSKGESEEETEEEKDDEKGKNKESDEEDERQTEEEENDEKGVKKDKEKKNKE 243
Query: 84 DFEARQKAVKEALKKGNMEDMDDDFGLRS-----CKHGKKHKHDKHGKKHGKKHDKDHDD 138
E + K+ K+ E+ DD+ G + CK KK K DK K K+ + ++
Sbjct: 244 KKEKKDNEKKDKSKEETEEEKDDEKGEKKDKEKKCKKNKKEKKDKETKDKSKEVSDEEEE 303
Query: 139 KDHDHHD-EDHSDKH 152
KD + + +D KH
Sbjct: 304 KDDEEGEKKDKKKKH 318
>ref|NP_189551.1| (NM_113830) hypothetical protein [Arabidopsis thaliana]
dbj|BAB02950.1| (AP000388) gb|AAF16629.1~gene_id:MRI12.6~similar to unknown protein
[Arabidopsis thaliana]
Length = 294
Score = 43.1 bits (100), Expect = 0.001
Identities = 33/108 (30%), Positives = 47/108 (42%), Gaps = 17/108 (15%)
Query: 55 EKMPEDKRKAFHKQLHE---YATKNTDKMTVADFEARQKAVK------EALKKGNMEDMD 105
++ + K+K +K+ H+ Y K K D + ++K E KK N D D
Sbjct: 182 DEFKKKKKKEQYKEHHDDDDYDEKKKKKKDYNDDDEKKKKKHYNDDDDEKKKKHNYNDDD 241
Query: 106 DDFGLRSCKHGKKHKHDKHGKKHGKKHDKDHDD--KDHDHHDEDHSDK 151
D+ K KK HD KK K +D D D+ K DH D+D K
Sbjct: 242 DE------KKKKKEYHDDEDKKKKKHYDNDDDEKKKKKDHRDDDDEKK 283
>ref|NP_420993.1| (NC_002696) hypothetical protein [Caulobacter crescentus CB15]
gb|AAK24161.1| (AE005891) hypothetical protein [Caulobacter crescentus CB15]
Length = 232
Score = 42.7 bits (99), Expect = 0.001
Identities = 25/56 (44%), Positives = 29/56 (51%), Gaps = 9/56 (16%)
Query: 92 VKEALKKGNMEDMDDDFGLRSCKHGKKHKHDKHGKKHGKK-HDKDHDDKDHDHHDE 146
+ +A+K ED DD HGK KH HGK H K HDKDHD HHD+
Sbjct: 85 LNKAMKGERPEDKKDD-------HGKGDKHG-HGKGHDHKGHDKDHDHAGGGHHDD 132
>ref|NP_473250.1| (NC_000521) predicted using hexExon; MAL3P4.1 (PFC0570c),
Hypothetical protein, len: 420 aa [Plasmodium
falciparum]
pir||T18450 hypothetical protein C0570c - malaria parasite (Plasmodium
falciparum)
Length = 419
Score = 42.7 bits (99), Expect = 0.001
Identities = 31/109 (28%), Positives = 54/109 (49%), Gaps = 3/109 (2%)
Query: 45 DYTKELKKRMEKMPEDKRKAFHKQLHEYAT-KNTDKMTVADFEARQKAVKEALKKGNMED 103
D +E K+ +K EDK++ ++ E K DK D E +K KE KK E+
Sbjct: 273 DKEEEDKEEEDKKEEDKKEECKEEYKEDCKDKEEDKKECKDKEEGKKECKEEGKKECKEE 332
Query: 104 MDDDFGLRSCKH-GKKHKHDKHGKKHGKKHDKDHDDKDHDHHDEDHSDK 151
++ G + CK GK+ +K +++ +K DK+ + H + E + D+
Sbjct: 333 CKEE-GKKECKEEGKEEDKEKDKEENNEKEDKEEEINSHLNIHETNYDE 380
>emb|CAA15592.2| (AL008970) hypothetical protein, PFC0570c [Plasmodium falciparum
3D7]
Length = 594
Score = 42.7 bits (99), Expect = 0.001
Identities = 31/109 (28%), Positives = 54/109 (49%), Gaps = 3/109 (2%)
Query: 45 DYTKELKKRMEKMPEDKRKAFHKQLHEYAT-KNTDKMTVADFEARQKAVKEALKKGNMED 103
D +E K+ +K EDK++ ++ E K DK D E +K KE KK E+
Sbjct: 448 DKEEEDKEEEDKKEEDKKEECKEEYKEDCKDKEEDKKECKDKEEGKKECKEEGKKECKEE 507
Query: 104 MDDDFGLRSCKH-GKKHKHDKHGKKHGKKHDKDHDDKDHDHHDEDHSDK 151
++ G + CK GK+ +K +++ +K DK+ + H + E + D+
Sbjct: 508 CKEE-GKKECKEEGKEEDKEKDKEENNEKEDKEEEINSHLNIHETNYDE 555
>gb|AAL25646.1|AF197329_1 (AF197329) zinc transporter [Eucalyptus grandis]
Length = 421
Score = 42.4 bits (98), Expect = 0.002
Identities = 18/38 (47%), Positives = 19/38 (49%), Gaps = 1/38 (2%)
Query: 115 HGKKHKHDKHGKKHGKKHDKDHDDKDHDHHDEDHSDKH 152
H H HD HG H HD H+ DH H EDH D H
Sbjct: 184 HSHGHGHD-HGHGHSHGHDDAHEHSDHAHSHEDHGDLH 220
>ref|NP_500745.1| (NM_068344) Y59E9AL.6.p [Caenorhabditis elegans]
gb|AAF60823.1| (AC024838) Hypothetical protein Y59E9AL.6 [Caenorhabditis elegans]
Length = 214
Score = 42.0 bits (97), Expect = 0.002
Identities = 32/109 (29%), Positives = 43/109 (39%), Gaps = 6/109 (5%)
Query: 48 KELKKRMEKMPEDKRKAFHKQLHEYATKNTDKMTVADFEARQKAVKEALKKGNMEDMDDD 107
K+ KK EK D +K K + K +DK + ++K ++ K E DDD
Sbjct: 96 KDEKKDEEKKDGDDKKDEKKDDDKKDEKKSDKKDEKKDDKKEKDEEKKDDKKEDEKKDDD 155
Query: 108 F------GLRSCKHGKKHKHDKHGKKHGKKHDKDHDDKDHDHHDEDHSD 150
K K K K K+ K KD D KD D D+D D
Sbjct: 156 KKDDKKEAKSKSKKSNKSKKSKKSKREKKDDKKDEDKKDDDKKDDDKKD 204
>ref|NP_473064.1| (NC_000910) hypothetical protein [Plasmodium falciparum]
pir||B71609 hypothetical protein PFB0680w - malaria parasite (Plasmodium
falciparum)
gb|AAC71925.1| (AE001410) hypothetical protein [Plasmodium falciparum 3D7]
Length = 665
Score = 42.0 bits (97), Expect = 0.002
Identities = 31/132 (23%), Positives = 61/132 (45%), Gaps = 12/132 (9%)
Query: 21 KDFSKTSDEDLAKMAGVVAPQDIVDYTKELKKRMEKMPEDKRKAFHKQLHEYATKNTDKM 80
KD K +D AK + D KE K MEK+ + K +E K DK
Sbjct: 383 KDIEKEKSKDTAK-----EKEKDKDIEKEKSKDMEKLKNKQNDEKKKDDNE--KKKNDKQ 435
Query: 81 TVADFEARQKAVKEALKKGNMEDMDDDFGLRSCKHGKKHKHDKHGKKHGKKHDKDHDDKD 140
+ D + ++E + + ED D+D ++ KK K K+G ++G ++ ++ +++
Sbjct: 436 DIHDDNDDENDMEEIEENDDEEDEDEDM-----ENKKKKKKGKNGNENGNENGSENGNEN 490
Query: 141 HDHHDEDHSDKH 152
+ + ++ +K+
Sbjct: 491 GNENGNENENKN 502
Score = 40.0 bits (92), Expect = 0.008
Identities = 26/112 (23%), Positives = 52/112 (46%), Gaps = 16/112 (14%)
Query: 41 QDIVDYTKEL--KKRMEKMPEDKRKAFHKQLHEYATKNTDKMTVADFEARQKAVKEALKK 98
+D+ + KEL KK+ EK+ +D + +K+ ++ + K E +K+
Sbjct: 173 KDVKEGVKELEEKKKEEKISDDHKVEENKKSDDHKVEENKKSDDHKVEENKKS------- 225
Query: 99 GNMEDMDDDFGLRSCKHGKKHKHDKHGKKHGKKHDKDHDDKDHDHHDEDHSD 150
DD + K ++H+ D+ K KK + + D++ D +DED+ +
Sbjct: 226 -------DDHKIEEVKKVEEHEEDEEEDKKEKKSENKNKDENKDENDEDNDE 270
>ref|NP_356155.1| (NC_003063) AGR_L_732p [Agrobacterium tumefaciens] [Agrobacterium
tumefaciens str. C58 (Cereon)]
ref|NP_534980.1| (NC_003305) conserved hypothetical protein [Agrobacterium
tumefaciens str. C58 (U. Washington)]
gb|AAK88940.1| (AE008236) AGR_L_732p [Agrobacterium tumefaciens str. C58 (Cereon)]
gb|AAL45296.1| (AE009379) conserved hypothetical protein [Agrobacterium
tumefaciens str. C58 (U. Washington)]
Length = 375
Score = 42.0 bits (97), Expect = 0.002
Identities = 18/41 (43%), Positives = 19/41 (45%), Gaps = 2/41 (4%)
Query: 112 SCKHGKKHKHDKHGKKHGKKHDKDHDDKDHDHHDEDHSDKH 152
+C H H HG HG HD H D DH HHD H H
Sbjct: 226 ACGPDCDHHHHDHGHDHG--HDHHHHDHDHGHHDHAHDHGH 264
>gb|AAB93453.2| (U28739) Hypothetical protein C17G10.6 [Caenorhabditis elegans]
Length = 632
Score = 41.6 bits (96), Expect = 0.003
Identities = 26/61 (42%), Positives = 30/61 (48%), Gaps = 8/61 (13%)
Query: 90 KAVKEALKKGNMEDMDDDFGLRSCKHGKKHKHDKHGKKHGKKHDKDHDDKDHDHHDEDHS 149
K K KKG D D+D K GKK K K GKK K D+D D+ D DED+
Sbjct: 271 KKSKSKKKKGKKNDDDED----DHKKGKKGKKGKKGKKKNKDDDEDEDEDD----DEDNG 322
Query: 150 D 150
D
Sbjct: 323 D 323
>sp|P08016|EGGS_SCHMA PUTATIVE EGGSHELL PROTEIN
pir||A54530 eggshell protein - fluke (Schistosoma mansoni) (fragment)
gb|AAA29877.1| (M15371) egg shell protein [Schistosoma mansoni]
Length = 149
Score = 41.6 bits (96), Expect = 0.003
Identities = 18/46 (39%), Positives = 23/46 (49%), Gaps = 1/46 (2%)
Query: 107 DFGLRSCKHGKKHKHDKHGKKHGKKHDKDHDDKDHDHHDEDHSDKH 152
D+G R K+ + HDKH HD HD + H HH+ DH H
Sbjct: 95 DYGSRYEKYSYRKDHDKHDHDEHDHHDDHHDHR-HHHHEHDHHHHH 139
>ref|NP_495089.1| (NM_062688) C17G10.6.p [Caenorhabditis elegans]
pir||T34103 hypothetical protein C17G10.6 - Caenorhabditis elegans
Length = 683
Score = 41.6 bits (96), Expect = 0.003
Identities = 26/61 (42%), Positives = 30/61 (48%), Gaps = 8/61 (13%)
Query: 90 KAVKEALKKGNMEDMDDDFGLRSCKHGKKHKHDKHGKKHGKKHDKDHDDKDHDHHDEDHS 149
K K KKG D D+D K GKK K K GKK K D+D D+ D DED+
Sbjct: 322 KKSKSKKKKGKKNDDDED----DHKKGKKGKKGKKGKKKNKDDDEDEDEDD----DEDNG 373
Query: 150 D 150
D
Sbjct: 374 D 374
>ref|NP_510563.1| (NM_078162) H13N06.5.p [Caenorhabditis elegans]
sp|Q9XTQ7|KE4L_CAEEL Hypothetical Ke4-like protein H13N06.5 in chromosome X
pir||T23089 hypothetical protein H13N06.5 - Caenorhabditis elegans
emb|CAB17070.1| (Z99942) cDNA EST EMBL:Z14746 comes from this gene; cDNA EST
EMBL:M88821 comes from this gene~cDNA EST yk51b1.3 comes
from this gene; cDNA EST yk91d6.3 comes from this
gene~cDNA EST yk111f8.3 comes from this gene; cDNA EST
yk51b1.5 comes from this gene>
Length = 515
Score = 41.6 bits (96), Expect = 0.003
Identities = 33/112 (29%), Positives = 41/112 (36%), Gaps = 18/112 (16%)
Query: 46 YTKELKKRMEKMPEDKRKAFHKQLHEYATKNTDKMTVAD-------FEARQKAVKEALKK 98
YTKE+ PE ++ H Q H +A AD A + A A
Sbjct: 77 YTKEMND-----PEYVQQNVHHQGHGHAHGGHGHAHDADGGCPYAKAAAAEAATAAAHDH 131
Query: 99 GNMEDMDDDFGLRSCKHGKKHKHDKHGKKHGKKHDKDHDDKDHDHHDEDHSD 150
G+ D D H H HD HG H ++ D H HDHH H D
Sbjct: 132 GHAHDHDHGHA-----HDHGHAHDHHGHSHDEEEDHHHGHA-HDHHGHSHED 177
>ref|NP_491919.1| (NM_059518) T23B3.5.p [Caenorhabditis elegans]
pir||T25911 hypothetical protein T23B3.5 - Caenorhabditis elegans
gb|AAB42334.1| (U88309) Hypothetical protein T23B3.5 [Caenorhabditis elegans]
Length = 211
Score = 41.6 bits (96), Expect = 0.003
Identities = 36/129 (27%), Positives = 53/129 (40%), Gaps = 12/129 (9%)
Query: 21 KDFSKTSDE--DLAKMAGVVAPQDIVDYTKELKKRMEKMPEDKRKAFHKQLHEYATKNTD 78
KD K +E D K G D D K+ K+ EK D++K K+ + K +
Sbjct: 82 KDGDKKEEEKKDEEKKDGDKKEDDKKDEKKDEDKKDEKKDADEKKDEEKKDDKKDEKKDE 141
Query: 79 KMTVADFEARQKAVKEALKKGNMEDMDDDFGLRSCKHGKKHKHDKHGKKHGKKHDKDHDD 138
K E ++K+ K KK + + K K+ K D+ K+ KK D DD
Sbjct: 142 KKDEKKDEKKEKSKKS--KKSSKS--------KKSKKSKREKKDEEKKEDDKKEDDKKDD 191
Query: 139 KDHDHHDED 147
K D +D
Sbjct: 192 KKEDEKKDD 200
>ref|NP_499564.1| (NM_067163) Y56A3A.32.p [Caenorhabditis elegans]
emb|CAB60511.1| (AL132860) contains similarity to Pfam domain: PF00070 (Pyridine
nucleotide-disulphide oxidoreductase), Score=99.8,
E-value=3.5e-29, N=1; PF00939 (Sodium:sulfate symporter
transmembrane region), Score=1.5, E-value=2.8, N=1~cDNA
EST yk163f2.5 comes from>
Length = 643
Score = 41.6 bits (96), Expect = 0.003
Identities = 15/37 (40%), Positives = 23/37 (61%)
Query: 115 HGKKHKHDKHGKKHGKKHDKDHDDKDHDHHDEDHSDK 151
HG H H KH KKH +KH++ H++K+H ++ K
Sbjct: 104 HGHGHGHAKHSKKHEEKHEQKHEEKEHAEPEKKEEAK 140
>gb|AAA29908.1| (M74170) p48 eggshell protein [Schistosoma mansoni]
Length = 414
Score = 41.6 bits (96), Expect = 0.003
Identities = 18/46 (39%), Positives = 23/46 (49%), Gaps = 1/46 (2%)
Query: 107 DFGLRSCKHGKKHKHDKHGKKHGKKHDKDHDDKDHDHHDEDHSDKH 152
D+G R K+ + HDKH HD HD + H HH+ DH H
Sbjct: 360 DYGSRYEKYSYRKDHDKHDHDEHDHHDDHHDHR-HHHHEHDHHHHH 404
>ref|NP_619243.1| (NC_003552) hypothetical protein (multi-domain) [Methanosarcina
acetivorans str. C2A] [Methanosarcina acetivorans C2A]
gb|AAM07723.1| (AE011158) hypothetical protein (multi-domain) [Methanosarcina
acetivorans str. C2A] [Methanosarcina acetivorans C2A]
Length = 489
Score = 41.2 bits (95), Expect = 0.004
Identities = 14/41 (34%), Positives = 27/41 (65%), Gaps = 1/41 (2%)
Query: 113 CKHGKKHKHDKHGKKHGKK-HDKDHDDKDHDHHDEDHSDKH 152
C HG+KH ++H ++ H++++D ++H+H+ DH KH
Sbjct: 403 CHHGQKHHREQHHHADEEEYHEEENDHEEHEHYGNDHHHKH 443
>ref|NP_492424.1| (NM_060023) Zinc finger, C3HC4 type (RING finger), Zinc finger,
CCHC class [Caenorhabditis elegans]
emb|CAB04326.2| (Z81532) contains similarity to Pfam domain: PF00098 (Zinc knuckle
(zf-CCHC) domain), E-value=0.045~cDNA EST EMBL:T01634
comes from this gene~cDNA EST yk116c3.5 comes from this
gene~cDNA EST yk636g4.3 comes from this gene~cDNA EST
yk636g4.5 comes from >
Length = 1190
Score = 41.2 bits (95), Expect = 0.004
Identities = 35/128 (27%), Positives = 59/128 (45%), Gaps = 7/128 (5%)
Query: 25 KTSDEDLAKMAGVVAPQDIVDYTKELKKRMEKMPEDKRKAFHKQLHEYATKNTDKMTVAD 84
+TS+ ++A+ P V+ +E + E + ED +K Q T + D +
Sbjct: 776 ETSEAEVAETKEESVP---VEEDEEPENHDEDV-EDHKKEKESQSSTINTADEDDESSKK 831
Query: 85 FEARQKAVKEALKKGNMEDMDDDFGLRSCKHGKKHKHDKHGKKHGKKHDKDHDDKDHDHH 144
+ +K+ K ED D+D + KH KKHK +K KK +K D+D DD D +
Sbjct: 832 MKKHKKSKKNKKHHRKEEDGDEDEERKRKKH-KKHKKEKKSKK--EKRDEDEDDLDTEKK 888
Query: 145 DEDHSDKH 152
++ K+
Sbjct: 889 EKKKERKY 896
>gb|AAL91692.1|AF420240_1 (AF420240) merozoite surface protein 4 [Plasmodium vivax]
Length = 232
Score = 41.2 bits (95), Expect = 0.004
Identities = 19/50 (38%), Positives = 24/50 (48%), Gaps = 1/50 (2%)
Query: 102 EDMDDDFGLRSCKHGKKHKHDKHGKKHGKKHDKDHDDKDHDHHDEDHSDK 151
E + D+ + HG H D HG HG H DH D D H +DH D+
Sbjct: 101 EAENGDYNEQGDDHGDDHGDD-HGDDHGDDHGDDHGDDHGDDHGDDHGDE 149
>pir||T21861 hypothetical protein F36F2.3 - Caenorhabditis elegans
Length = 1877
Score = 41.2 bits (95), Expect = 0.004
Identities = 35/128 (27%), Positives = 59/128 (45%), Gaps = 7/128 (5%)
Query: 25 KTSDEDLAKMAGVVAPQDIVDYTKELKKRMEKMPEDKRKAFHKQLHEYATKNTDKMTVAD 84
+TS+ ++A+ P V+ +E + E + ED +K Q T + D +
Sbjct: 773 ETSEAEVAETKEESVP---VEEDEEPENHDEDV-EDHKKEKESQSSTINTADEDDESSKK 828
Query: 85 FEARQKAVKEALKKGNMEDMDDDFGLRSCKHGKKHKHDKHGKKHGKKHDKDHDDKDHDHH 144
+ +K+ K ED D+D + KH KKHK +K KK +K D+D DD D +
Sbjct: 829 MKKHKKSKKNKKHHRKEEDGDEDEERKRKKH-KKHKKEKKSKK--EKRDEDEDDLDTEKK 885
Query: 145 DEDHSDKH 152
++ K+
Sbjct: 886 EKKKERKY 893
>gb|AAK82653.1|AF162859_1 (AF162859) adsorption protein pIII [Xanthomonas oryzae phage phiXo]
Length = 340
Score = 40.8 bits (94), Expect = 0.005
Identities = 18/38 (47%), Positives = 19/38 (49%), Gaps = 1/38 (2%)
Query: 115 HGKKHKHDKHGKKHGKKHDKDHDDKDHDHHDEDHSDKH 152
HG H D HG HG H DH D D H +DH D H
Sbjct: 169 HGDDHG-DGHGDDHGDGHGDDHGDGHGDDHGDDHGDDH 205
>gb|AAC47848.1| (AF030694) O1 [Plasmodium falciparum]
Length = 776
Score = 40.8 bits (94), Expect = 0.005
Identities = 26/105 (24%), Positives = 49/105 (45%), Gaps = 3/105 (2%)
Query: 48 KELKKRMEKMPEDKRKAFHKQLHEYATKNTDKMTVADFEARQKAVKEALKKGNMEDMDDD 107
KE+K E DK+K K+ + ++ + + + +K+ ++ + + D
Sbjct: 312 KEVKSENESKHRDKKKKKEKRKNHRSSSDDSESISLSCTSDEKSSNKSSSRSVEKVKKDI 371
Query: 108 FGLRSCKHGKKHKHDKHGKKHGKKHDKDHDDKDHDHHDEDHSDKH 152
+ + KKHKH KH KH KH++ KD D + + + DK+
Sbjct: 372 DKKKKREEEKKHKH-KH--KHKHKHNEKRKSKDKDKYKDKYKDKY 413
>gb|EAA11042.1| (AAAB01008960) agCP6338 [Anopheles gambiae str. PEST]
Length = 98
Score = 40.8 bits (94), Expect = 0.005
Identities = 19/43 (44%), Positives = 20/43 (46%), Gaps = 5/43 (11%)
Query: 115 HGKKHKHDKHGKKHGKKHDKDHDDKDHDH-----HDEDHSDKH 152
HGK K HG HGK H H + DHDH D H D H
Sbjct: 54 HGKNGKKCDHGHTHGKDHAAGHHNHDHDHGHSRGSDHGHQDGH 96
>ref|NP_485136.1| (NC_003272) hypothetical protein [Nostoc sp. PCC 7120]
dbj|BAB73050.1| (AP003584) ORF_ID:alr1093~hypothetical protein [Nostoc sp. PCC
7120]
Length = 374
Score = 40.4 bits (93), Expect = 0.006
Identities = 35/140 (25%), Positives = 54/140 (38%), Gaps = 19/140 (13%)
Query: 20 AKDFSKTSDEDLAKMAGVVAPQDIVDYTKELKKRMEKMPEDKRKAFHKQLHEYATKNTDK 79
A F T DL ++ ++ D +Y+ +L + A+ + T D+
Sbjct: 119 ALTFLGTELRDLTRLDSIITVVDAANYSLDL---FNSQAAYSQIAYGDVILLNKTDLVDE 175
Query: 80 MTVADFEARQKAVKEALKKGNMEDMDDDFGL-------RSCKH---GKKHKHDKHGKKHG 129
++ D E + VKE + + L S K+ +H HD H
Sbjct: 176 ASLNDLERKINEVKEGARILRTKRSQVPLPLILSVGLFESDKYYDAADEHSHDHHD---- 231
Query: 130 KKHDKDHDDKDHDHHDEDHS 149
HD DH +HDHHD DHS
Sbjct: 232 --HDHDHSACEHDHHDHDHS 249
>gb|AAA74210.1| (L43851) surface antigen [Pneumocystis carinii]
Length = 288
Score = 40.0 bits (92), Expect = 0.008
Identities = 19/57 (33%), Positives = 28/57 (48%), Gaps = 4/57 (7%)
Query: 99 GNMEDMDDDFGLRSCKHGKKHKHD---KHGKKHGKKHDKDHDDKDHDHHDEDHSDKH 152
G+ + DD +HG H H+ +H + G H +H+D H+HH DH D H
Sbjct: 197 GDGDGDGDDDDEHDHEHGHDHDHEDGQEHEDEDGHDHGHEHED-GHEHHHHDHDDHH 252
>gb|AAF22235.1|AF152557_1 (AF152557) histidine and aspartic acid rich protein [Pneumocystis
carinii f. sp. carinii]
Length = 296
Score = 40.0 bits (92), Expect = 0.008
Identities = 19/57 (33%), Positives = 28/57 (48%), Gaps = 4/57 (7%)
Query: 99 GNMEDMDDDFGLRSCKHGKKHKHD---KHGKKHGKKHDKDHDDKDHDHHDEDHSDKH 152
G+ + DD +HG H H+ +H + G H +H+D H+HH DH D H
Sbjct: 205 GDGDGDGDDDDEHDHEHGHDHDHEDGQEHEDEDGHDHGHEHED-GHEHHHHDHDDHH 260
>sp|Q45257|HYPB_BRAJA Hydrogenase nickel incorporation protein hypB
gb|AAA17763.1| (L24513) HypB [Bradyrhizobium japonicum]
Length = 302
Score = 40.0 bits (92), Expect = 0.008
Identities = 20/45 (44%), Positives = 22/45 (48%), Gaps = 6/45 (13%)
Query: 113 CKHGK---KHKHDKHGKKHGKKHDKDHDDKDHDH--HDEDHSDKH 152
C GK +H HD H HG HD HD H H HD+DH H
Sbjct: 7 CSDGKASIEHAHDHH-HDHGHDHDHGHDGHHHHHHGHDQDHHHHH 50
>ref|NP_386976.1| (NC_003047) CONSERVED HYPOTHETICAL PROTEIN [Sinorhizobium meliloti]
emb|CAC47449.1| (AL591792) CONSERVED HYPOTHETICAL PROTEIN [Sinorhizobium meliloti]
Length = 368
Score = 40.0 bits (92), Expect = 0.008
Identities = 20/46 (43%), Positives = 21/46 (45%), Gaps = 2/46 (4%)
Query: 100 NMEDMDDDFGLRSCKHGKKHKHDKHGKKHGKKHDKDHDDKDHDHHD 145
+ ED D G C H H HD H H HD DHD H HHD
Sbjct: 219 DQEDHDHVCG-PDCDHDHHH-HDHHHHDHDHDHDHDHDHHHHHHHD 262
>gb|AAA29596.1| (L27592) erythrocyte membrane antigen 1 [Plasmodium chabaudi]
Length = 437
Score = 40.0 bits (92), Expect = 0.008
Identities = 24/77 (31%), Positives = 36/77 (46%), Gaps = 14/77 (18%)
Query: 75 KNTDKMTVADFEARQKAVKEALKKGNMEDMDDDFGLRSCKHGKKHKHDKHGKKHGKKHDK 134
+N D +++ D+E +E +KKG K GKK K K KK G++
Sbjct: 353 ENADDLSLLDYEENSNENQENVKKGK-------------KKGKK-KGKKKVKKEGEEESD 398
Query: 135 DHDDKDHDHHDEDHSDK 151
D DD D + DED ++
Sbjct: 399 DDDDNDDEDEDEDEEEE 415
>ref|NP_371201.1| (NC_002758) conserved hypothetical protein [Staphylococcus aureus
subsp. aureus Mu50]
ref|NP_373887.1| (NC_002745) conserved hypothetical protein [Staphylococcus aureus
subsp. aureus N315]
dbj|BAB41865.1| (AP003131) conserved hypothetical protein [Staphylococcus aureus
subsp. aureus N315]
dbj|BAB56839.1| (AP003360) conserved hypothetical protein [Staphylococcus aureus
subsp. aureus Mu50]
Length = 131
Score = 40.0 bits (92), Expect = 0.008
Identities = 31/106 (29%), Positives = 44/106 (41%), Gaps = 16/106 (15%)
Query: 48 KELKKRMEKMPEDKRKAFHKQLHEYATKNTDKMTVADFEARQKAVKEALKKGNMEDMDDD 107
KELK + EK+ ++K K KQ D E K +K + K+ N +D D+
Sbjct: 39 KELKDKKEKLQQEKEKLADKQ--------------KDLEKEVKDLKPS-KEDNKDDKKDE 83
Query: 108 FGLRSCKHGKKHKHDKHGKKHGKKHDKD-HDDKDHDHHDEDHSDKH 152
+ K+ DK K K DKD H D+ +DKH
Sbjct: 84 DKNKDKDKDKEASQDKQSKDQTKSSDKDNHKKPTSTDKDQKANDKH 129
>ref|NP_310939.1| (NC_002695) hypothetical protein [Escherichia coli O157:H7]
dbj|BAB36335.1| (AP002560) hypothetical protein [Escherichia coli O157:H7]
Length = 279
Score = 40.0 bits (92), Expect = 0.008
Identities = 15/38 (39%), Positives = 22/38 (57%), Gaps = 4/38 (10%)
Query: 119 HKHDKHGKKHGKKHDKDHDDKDHDHHD----EDHSDKH 152
H+H H +H + HD DHD + H HH+ E++ D H
Sbjct: 121 HEHHHHDHEHHQDHDHDHDHEHHHHHEHGDNEEYQDAH 158
>gb|EAA12358.1| (AAAB01008964) agCP11106 [Anopheles gambiae str. PEST]
Length = 314
Score = 40.0 bits (92), Expect = 0.008
Identities = 24/91 (26%), Positives = 39/91 (42%), Gaps = 5/91 (5%)
Query: 60 DKRKAFHKQLHEYATKNTDKMTVADFEARQKAVKEALKKGNMEDMDDDFGLRSCKHGKKH 119
DK K Y T T ++++ ++ K K+ + E DDD+ ++
Sbjct: 215 DKNKPIPCPKCNYETSQTKDLSMS-----VRSHKYGRKRMDDEGDDDDYAYDDEYMSYRN 269
Query: 120 KHDKHGKKHGKKHDKDHDDKDHDHHDEDHSD 150
HD + + G D D+DD D D D+D D
Sbjct: 270 SHDHYNEVSGSSSDDDYDDDDDDDEDDDEDD 300
Database: /home/scwang/download_20020708_db/nr
Posted date: Aug 7, 2002 12:55 PM
Number of letters in database: 324,149,939
Number of sequences in database: 1,026,957
Lambda K H
0.313 0.129 0.367
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 98,468,644
Number of Sequences: 1026957
Number of extensions: 4105941
Number of successful extensions: 29089
Number of sequences better than 1.0e-02: 47
Number of HSP's better than 0.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 46
Number of HSP's that attempted gapping in prelim test: 28249
Number of HSP's gapped (non-prelim): 361
length of query: 152
length of database: 324,149,939
effective HSP length: 110
effective length of query: 42
effective length of database: 211,184,669
effective search space: 8869756098
effective search space used: 8869756098
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 92 (40.0 bits)