BLASTP 2.2.1 [Apr-13-2001]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|15645361|ref|NP_207535.1| conserved hypothetical
protein [Helicobacter pylori 26695]
         (161 letters)

Database: /home/scwang/download_20020708_db/nr
           1,026,957 sequences; 324,149,939 total letters

Searching..................................................done


                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

ref|NP_207535.1|  (NC_000915) conserved hypothetical protein...   335  1e-91
ref|NP_223396.1|  (NC_000921) HIT FAMILY PROTEIN [Helicobact...   322  1e-87
ref|NP_281686.1|  (NC_002163) HIT-like protein [Campylobacte...   139  1e-32
ref|NP_376157.1|  (NC_003106) 171aa long hypothetical bis(5'...   139  1e-32
ref|NP_577737.1|  (NC_003413) hit family protein (hit) [Pyro...   137  3e-32
ref|NP_142074.1|  (NC_000961) hypothetical protein [Pyrococc...   137  3e-32
ref|NP_125757.1|  (NC_000868) HIT FAMILY PROTEIN (HIT) [Pyro...   137  4e-32
ref|NP_214481.1|  (NC_000918) putative protein [Aquifex aeol...   137  4e-32
ref|NP_146980.1|  (NC_000854) hit-like protein [Aeropyrum pe...   128  2e-29
ref|NP_341798.1|  (NC_002754) HIT-like protein, hypothetical...   128  2e-29
ref|NP_661655.1|  (NC_002932) Hit family protein [Chlorobium...   122  2e-27
ref|NP_071036.1|  (NC_000917) HIT family protein (hit) [Arch...   118  2e-26
ref|NP_625809.1|  (NC_003888) conserved hypothetical protein...   113  9e-25
ref|NP_280585.1|  (NC_002607) histidine triad protein; Hit2 ...   103  7e-22
ref|NP_560819.1|  (NC_003364) HIT family protein [Pyrobaculu...   102  2e-21
gb|AAG17335.1|AF265558_2  (AF265558) unknown [Mycobacterium ...    99  2e-20
ref|NP_217129.1|  (NC_000962) hypothetical protein Rv2613c [...    95  3e-19
dbj|BAB99063.1|  (AP005279) Diadenosine tetraphosphate (Ap4A...    92  2e-18
emb|CAB09619.1|  (Z96801) hypothetical protein MLCL581.17c [...    91  6e-18
ref|NP_301409.1|  (NC_002677) conserved hypothetical protein...    91  6e-18
ref|NP_600882.1|  (NC_003450) COG0537:Diadenosine tetraphosp...    85  3e-16
ref|NP_142915.1|  (NC_000961) hypothetical protein [Pyrococc...    68  3e-11
ref|NP_578836.1|  (NC_003413) hit family protein (hit) [Pyro...    68  3e-11
ref|NP_126658.1|  (NC_000868) HIT-LIKE PROTEIN [Pyrococcus a...    66  2e-10
ref|NP_280841.1|  (NC_002607) histidine triad protein; Hit1 ...    61  5e-09
ref|NP_486506.1|  (NC_003272) hypothetical protein [Nostoc s...    61  5e-09
ref|NP_394598.1|  (NC_002578) histidine triad (HIT) related ...    60  7e-09
pir||B64408  histidine triad (HIT) protein MJ0866 - Methanoc...    60  9e-09
ref|NP_247861.1|  (NC_000909) HIT family protein (hit) [Meth...    59  1e-08
ref|NP_615770.1|  (NC_003552) histidine triad protein [Metha...    59  3e-08
ref|NP_377432.1|  (NC_003106) 141aa long hypothetical histid...    58  3e-08
ref|NP_633982.1|  (NC_003901) Hit-like protein [Methanosarci...    57  6e-08
ref|NP_560536.1|  (NC_003364) HIT family protein [Pyrobaculu...    57  6e-08
ref|NP_249997.1|  (NC_002516) probable HIT family protein [P...    57  1e-07
ref|NP_148648.1|  (NC_000854) histidine triad (HIT) protein ...    55  4e-07
ref|NP_109961.1|  (NC_000912) nucleotidyl hydrolases/transfe...    54  8e-07
ref|NP_111736.1|  (NC_002689) HIT (histidine triad) family p...    53  1e-06
dbj|BAB60383.1|  (AP000995) histidine triad protein [HIT] [T...    53  1e-06
ref|NP_378146.1|  (NC_003106) 150aa long hypothetical histid...    52  2e-06
ref|NP_269754.1|  (NC_002737) putative cell-cycle regulation...    52  3e-06
ref|NP_242055.1|  (NC_002570) Hit-like protein involved in c...    51  4e-06
gb|AAK96091.1|AF393466_28  (AF393466) HIT superfamily hydrol...    50  9e-06
ref|NP_345039.1|  (NC_003028) HIT family protein [Streptococ...    50  1e-05
ref|NP_471651.1|  (NC_003212) similar to histidine triad (HI...    49  2e-05
ref|NP_072794.1|  (NC_000908) hit protein, putative [Mycopla...    49  2e-05
ref|NP_212513.1|  (NC_001318) protein kinase C1 inhibitor (p...    49  2e-05
sp|P94252|YHIT_BORBU  Hypothetical HIT-like protein BB0379 >...    49  2e-05
ref|NP_465740.1|  (NC_003210) similar to histidine triad (HI...    49  2e-05
ref|NP_343549.1|  (NC_002754) Histidine triad (Hit) family p...    49  3e-05
ref|NP_348235.1|  (NC_003030) HIT family hydrolase [Clostrid...    48  3e-05
ref|NP_325839.1|  (NC_002771) HIT-LIKE PROTEIN (CELL CYCLE R...    47  6e-05
ref|NP_010591.1|  (NC_001136) Fhit homolog, member of the hi...    45  2e-04
ref|NP_078106.1|  (NC_002162) probable HIT protein [Ureaplas...    45  3e-04
ref|NP_268155.1|  (NC_002662) HYPOTHETICAL PROTEIN [Lactococ...    45  4e-04
ref|NP_372362.1|  (NC_002758) Hit-like protein involved in c...    44  5e-04
ref|NP_273646.1|  (NC_003112) hitA protein [Neisseria mening...    44  5e-04
ref|NP_597168.1|  (NC_003235) HIT FAMILY PROTEIN [Encephalit...    44  6e-04
ref|NP_102422.1|  (NC_002678) probable Hit-like protein invo...    44  6e-04
ref|NP_388884.1|  (NC_000964) Hit-like protein [Bacillus sub...    44  8e-04
ref|NP_213096.1|  (NC_000918) protein kinase C inhibitor (HI...    43  0.001
ref|NP_588328.1|  (NC_003421) hypothetical HIT-family protei...    42  0.002
ref|NP_283602.1|  (NC_003116) putative nucleotide-binding pr...    42  0.002
ref|NP_394795.1|  (NC_002578) cell-cycle regulation histidin...    42  0.002
ref|NP_654589.1|  (NC_003995) HIT, HIT family [Bacillus anth...    42  0.002
ref|NP_587836.1|  (NC_003421) diadenosine tetraphosphatase [...    42  0.003
emb|CAB95210.1|  (AL359773) probable hypothetical hit-family...    41  0.005
sp|O07817|HITA_NEIGO  HITA PROTEIN >gi|2197079|gb|AAB61288.1...    41  0.005
gb|AAL92398.1|  (AC115611) FRAGILE HISTIDINE TRIAD PROTEIN [...    40  0.007
>ref|NP_207535.1| (NC_000915) conserved hypothetical protein [Helicobacter pylori
           26695]
 pir||E64612 conserved hypothetical protein HP0741 - Helicobacter pylori
           (strain 26695)
 gb|AAD07787.1| (AE000586) conserved hypothetical protein [Helicobacter pylori
           26695]
          Length = 161

 Score =  335 bits (858), Expect = 1e-91
 Identities = 161/161 (100%), Positives = 161/161 (100%)

Query: 1   MQHLYAPWRESYLKGKNKSCVFCEISQNPAKDSENRVLYRNSDLFVVMNAYPYNPGHLLI 60
           MQHLYAPWRESYLKGKNKSCVFCEISQNPAKDSENRVLYRNSDLFVVMNAYPYNPGHLLI
Sbjct: 1   MQHLYAPWRESYLKGKNKSCVFCEISQNPAKDSENRVLYRNSDLFVVMNAYPYNPGHLLI 60

Query: 61  IPHVHQASVELLDLNTWLNMNALAPKVLKALYAYGAQGINLGLNLHRNAGAGIPEHLHMH 120
           IPHVHQASVELLDLNTWLNMNALAPKVLKALYAYGAQGINLGLNLHRNAGAGIPEHLHMH
Sbjct: 61  IPHVHQASVELLDLNTWLNMNALAPKVLKALYAYGAQGINLGLNLHRNAGAGIPEHLHMH 120

Query: 121 LVPRFLGDSNFMSVIAQTRVCGMDLNETYLTLKNLLEKELG 161
           LVPRFLGDSNFMSVIAQTRVCGMDLNETYLTLKNLLEKELG
Sbjct: 121 LVPRFLGDSNFMSVIAQTRVCGMDLNETYLTLKNLLEKELG 161
>ref|NP_223396.1| (NC_000921) HIT FAMILY PROTEIN [Helicobacter pylori J99]
 pir||D71903 hit family protein - Helicobacter pylori (strain J99)
 gb|AAD06245.1| (AE001499) HIT FAMILY PROTEIN [Helicobacter pylori J99]
          Length = 161

 Score =  322 bits (824), Expect = 1e-87
 Identities = 153/161 (95%), Positives = 156/161 (96%)

Query: 1   MQHLYAPWRESYLKGKNKSCVFCEISQNPAKDSENRVLYRNSDLFVVMNAYPYNPGHLLI 60
           MQHLYAPWRESYLK KNKSCVFC ISQNP KDSENRVLYRNSDLFVVMNAYPYNPGHLLI
Sbjct: 1   MQHLYAPWRESYLKEKNKSCVFCGISQNPTKDSENRVLYRNSDLFVVMNAYPYNPGHLLI 60

Query: 61  IPHVHQASVELLDLNTWLNMNALAPKVLKALYAYGAQGINLGLNLHRNAGAGIPEHLHMH 120
           +PH HQASVELLDLNTWLNMNALAPK+LKALYAYGAQGINLGLNLHRNAGAGIPEHLHMH
Sbjct: 61  VPHAHQASVELLDLNTWLNMNALAPKILKALYAYGAQGINLGLNLHRNAGAGIPEHLHMH 120

Query: 121 LVPRFLGDSNFMSVIAQTRVCGMDLNETYLTLKNLLEKELG 161
           LVPRFLGDSNF+SVIAQTRVCGMDLNETYL LKNLLEKELG
Sbjct: 121 LVPRFLGDSNFISVIAQTRVCGMDLNETYLALKNLLEKELG 161
>ref|NP_281686.1| (NC_002163) HIT-like protein [Campylobacter jejuni]
 pir||F81395 HIT-like protein Cj0499 [imported] - Campylobacter jejuni  (strain
           NCTC 11168)
 emb|CAB75137.1| (AL139075) HIT-like protein [Campylobacter jejuni]
          Length = 161

 Score =  139 bits (350), Expect = 1e-32
 Identities = 66/155 (42%), Positives = 94/155 (60%), Gaps = 5/155 (3%)

Query: 1   MQHLYAPWRESYLKGKNKSCVFCEISQNPAKDSENRVLYRNSDLFVVMNAYPYNPGHLLI 60
           MQ+LYAPWR  Y +     C FC+ +     D E  V++R    F VMN YPY+ GH ++
Sbjct: 1   MQYLYAPWRSEYFEKVKSICPFCDCANKIKSDEELGVIFRAKHCFGVMNRYPYSAGHFMV 60

Query: 61  IPHVHQASVELLDLNTWLNMN---ALAPKVLKALYAYGAQGINLGLNLHRNAGAGIPEHL 117
           IP++H+  +E L    W  M+    L  K+LK      A G+N+G+NL ++AGAGI  H 
Sbjct: 61  IPYIHEEHIENLSDEIWQEMSYFVRLGVKILKE--QIHANGVNIGMNLSKDAGAGIAFHC 118

Query: 118 HMHLVPRFLGDSNFMSVIAQTRVCGMDLNETYLTL 152
           H HLVPR+ GD+NF++ I +TRVCG ++ + Y  L
Sbjct: 119 HYHLVPRWSGDTNFITTIGETRVCGTNIEQVYQKL 153
>ref|NP_376157.1| (NC_003106) 171aa long hypothetical bis(5'-adenosyl)-triphosphatase
           [Sulfolobus tokodaii]
 dbj|BAB65266.1| (AP000982) 171aa long hypothetical bis(5'-adenosyl)-triphosphatase
           [Sulfolobus tokodaii]
          Length = 171

 Score =  139 bits (349), Expect = 1e-32
 Identities = 70/163 (42%), Positives = 103/163 (62%), Gaps = 6/163 (3%)

Query: 1   MQHLYAPWRESYL----KGKNKSCVFCEISQNPAKDSENRVLYRNSDLFVVMNAYPYNPG 56
           M  L+APWR  Y+    K K+ SC+FC++ +   +D  N ++YR    F+++NA+PYNPG
Sbjct: 1   MDILWAPWRSKYVSEASKNKSSSCLFCDVIEKK-EDKNNWIVYRGKFSFIILNAFPYNPG 59

Query: 57  HLLIIPHVHQASVELLDLNTWLNMNALAPKVLKALY-AYGAQGINLGLNLHRNAGAGIPE 115
           HL+I+P+ H +S+E L+    L M       +KA+   Y   G N+G+N+ R AGAGI +
Sbjct: 60  HLMIVPYKHVSSIEGLEEKEILEMMYFLKVSMKAIRKVYSPDGFNIGINIGRVAGAGIDQ 119

Query: 116 HLHMHLVPRFLGDSNFMSVIAQTRVCGMDLNETYLTLKNLLEK 158
           H+H+HLVPR+ GD+NFM VI   +V    L +TY  LK  +EK
Sbjct: 120 HVHIHLVPRWNGDANFMPVIGGVKVLPEILEDTYNKLKPEIEK 162
>ref|NP_577737.1| (NC_003413) hit family protein (hit) [Pyrococcus furiosus DSM 3638]
 gb|AAL80132.1| (AE010126) hit family protein (hit) [Pyrococcus furiosus DSM 3638]
          Length = 164

 Score =  137 bits (346), Expect = 3e-32
 Identities = 69/160 (43%), Positives = 101/160 (63%), Gaps = 3/160 (1%)

Query: 1   MQHLYAPWRESYLKG-KNKSCVFCEISQNPAKDSENRVLYRNSDLFVVMNAYPYNPGHLL 59
           M+ L+APWR  Y++  K++ C+FC+  +   +D E  +LYR    F++MN YPYNPGH++
Sbjct: 1   MKILWAPWRIEYIRAPKHEGCIFCDFPREN-RDRERLILYRGKHAFIIMNNYPYNPGHVM 59

Query: 60  IIPHVHQASVELLDLNTWLNMNALAPKVLKALY-AYGAQGINLGLNLHRNAGAGIPEHLH 118
           + P+ H ASVE L     L +  LA  ++KA+       G NLG N+ + AGAG+  H+H
Sbjct: 60  VAPYRHVASVEDLTDEEMLEIMKLAALIMKAIRKVMKPDGFNLGFNIGKVAGAGVDGHVH 119

Query: 119 MHLVPRFLGDSNFMSVIAQTRVCGMDLNETYLTLKNLLEK 158
           +H+VPR+ GD+NFM VIA T+V    L + Y  LK  LE+
Sbjct: 120 LHIVPRWNGDTNFMPVIADTKVIPESLEQAYEELKKALEE 159
>ref|NP_142074.1| (NC_000961) hypothetical protein [Pyrococcus horikoshii]
 pir||F71224 hypothetical protein PH0057 - Pyrococcus horikoshii
 dbj|BAA29125.1| (AP000001) 168aa long hypothetical protein [Pyrococcus horikoshii]
          Length = 168

 Score =  137 bits (346), Expect = 3e-32
 Identities = 68/160 (42%), Positives = 101/160 (62%), Gaps = 3/160 (1%)

Query: 1   MQHLYAPWRESYLKG-KNKSCVFCEISQNPAKDSENRVLYRNSDLFVVMNAYPYNPGHLL 59
           M+ L+APWR  Y++  K++ C+FC+  +   +D E  +LYR    F++MN YPYNPGH++
Sbjct: 1   MKVLWAPWRIEYIRSPKHEGCIFCDFPKEN-RDKERLILYRGKHAFIIMNNYPYNPGHVM 59

Query: 60  IIPHVHQASVELLDLNTWLNMNALAPKVLKALY-AYGAQGINLGLNLHRNAGAGIPEHLH 118
           + P+ H AS+E L     L +  LA  ++KA+       G NLG N+ + AGAG+  H+H
Sbjct: 60  VAPYRHVASIEDLTDEEMLEIMKLAALIMKAIRKVMKPDGFNLGFNIGKVAGAGVDGHVH 119

Query: 119 MHLVPRFLGDSNFMSVIAQTRVCGMDLNETYLTLKNLLEK 158
           +H+VPR+ GD+NFM VIA T+V    L + Y  LK  LE+
Sbjct: 120 LHIVPRWNGDTNFMPVIADTKVIPESLEQAYEELKKALEE 159
>ref|NP_125757.1| (NC_000868) HIT FAMILY PROTEIN (HIT) [Pyrococcus abyssi]
 pir||E75192 hit family protein (hit). PAB2301 - Pyrococcus abyssi  (strain
           Orsay)
 emb|CAB48988.1| (AJ248283) HIT FAMILY PROTEIN (HIT). [Pyrococcus abyssi]
          Length = 185

 Score =  137 bits (345), Expect = 4e-32
 Identities = 68/160 (42%), Positives = 101/160 (62%), Gaps = 3/160 (1%)

Query: 1   MQHLYAPWRESYLKG-KNKSCVFCEISQNPAKDSENRVLYRNSDLFVVMNAYPYNPGHLL 59
           M+ L+APWR  Y++  K++ C+FC+  +   +D E  +LYR    F++MN YPYNPGH++
Sbjct: 18  MKILWAPWRIEYIRAPKHEGCIFCDFPKEN-RDRERLILYRGKHAFIIMNNYPYNPGHVM 76

Query: 60  IIPHVHQASVELLDLNTWLNMNALAPKVLKALY-AYGAQGINLGLNLHRNAGAGIPEHLH 118
           + P+ H AS+E L     L +  LA  ++KA+       G NLG N+ + AGAG+  H+H
Sbjct: 77  VAPYRHVASIEDLTEEEMLEIMKLAALIMKAIRKVMKPDGFNLGFNIGKVAGAGVDGHVH 136

Query: 119 MHLVPRFLGDSNFMSVIAQTRVCGMDLNETYLTLKNLLEK 158
           +H+VPR+ GD+NFM VIA T+V    L + Y  LK  LE+
Sbjct: 137 LHIVPRWNGDTNFMPVIADTKVIPESLEQAYDELKKALEE 176
>ref|NP_214481.1| (NC_000918) putative protein [Aquifex aeolicus]
 pir||D70485 hypothetical protein aq_2159 - Aquifex aeolicus
 gb|AAC07886.1| (AE000776) putative protein [Aquifex aeolicus]
          Length = 191

 Score =  137 bits (345), Expect = 4e-32
 Identities = 72/164 (43%), Positives = 103/164 (61%), Gaps = 4/164 (2%)

Query: 1   MQHLYAPWRESYLKGKNK--SCVFCE-ISQNPAKDSENRVLYRNSDLFVVMNAYPYNPGH 57
           M+ L+APWR +Y++  +K   C  C  +SQ P K  E  ++Y+  + F+++N YPYN GH
Sbjct: 24  MKILWAPWRRAYVENVDKIEGCFLCHALSQPPEKWKEVLLVYKGKNAFIILNKYPYNTGH 83

Query: 58  LLIIPHVHQASVELLDLNTWLNMNALAPKVLKALYA-YGAQGINLGLNLHRNAGAGIPEH 116
           L+I+P  H  + E +D  T L M+ L    LKAL   Y   G N+G N  R AGAG+ EH
Sbjct: 84  LMIVPVKHIGNYEEVDEETALEMHKLLQVSLKALKKEYKPHGFNVGYNFGRPAGAGLEEH 143

Query: 117 LHMHLVPRFLGDSNFMSVIAQTRVCGMDLNETYLTLKNLLEKEL 160
           +H+H+VPR+ GD+NFM V+AQT+V   DL  TY  +K  +E+ L
Sbjct: 144 IHLHVVPRWNGDTNFMPVLAQTKVISEDLYSTYDRVKKAIEEVL 187
>ref|NP_146980.1| (NC_000854) hit-like protein [Aeropyrum pernix]
 pir||G72766 probable hit-like protein APE0122 - Aeropyrum pernix (strain K1)
 dbj|BAA79033.1| (AP000058) 184aa long hypothetical hit-like protein [Aeropyrum
           pernix]
          Length = 184

 Score =  128 bits (322), Expect = 2e-29
 Identities = 65/159 (40%), Positives = 98/159 (60%), Gaps = 4/159 (2%)

Query: 4   LYAPWRESYLK--GKNKSCVFCEISQNPAKDSENRVLYRNSDLFVVMNAYPYNPGHLLII 61
           L+APWR  Y+K  G  + CVFCE + +   D++  ++YR S  +V++N YPYN GH+++ 
Sbjct: 21  LWAPWRMKYIKQAGSREGCVFCE-APSMGDDAKALIVYRGSLSYVILNKYPYNSGHIMVT 79

Query: 62  PHVHQASVELLDLNTWLNMNALAPKVLKALY-AYGAQGINLGLNLHRNAGAGIPEHLHMH 120
           P+ H A +E L ++  + M  L    +KAL   Y   G N+G+N+   AGAGI  H H+H
Sbjct: 80  PYRHVAELEDLTMDEIVEMAKLVRASVKALKRVYAPHGFNIGVNIGEAAGAGIAGHFHIH 139

Query: 121 LVPRFLGDSNFMSVIAQTRVCGMDLNETYLTLKNLLEKE 159
           +VPR+ GDSNFM  +  T+V    L +T+  LK  +E+E
Sbjct: 140 IVPRWRGDSNFMLTVGGTKVIPESLEDTFKKLKPAVEEE 178
>ref|NP_341798.1| (NC_002754) HIT-like protein, hypothetical  (hit) [Sulfolobus
           solfataricus]
 gb|AAK40588.1| (AE006661) HIT-like protein, hypothetical  (hit) [Sulfolobus
           solfataricus]
          Length = 171

 Score =  128 bits (322), Expect = 2e-29
 Identities = 63/157 (40%), Positives = 98/157 (62%), Gaps = 6/157 (3%)

Query: 1   MQHLYAPWRESYL----KGKNKSCVFCEISQNPAKDSENRVLYRNSDLFVVMNAYPYNPG 56
           M  L+APWR  Y+    K K   C+FC + +    D +N ++YR    F+++NA+PYN  
Sbjct: 1   MDILWAPWRAKYISETSKVKQDECLFCRVIKEE-NDEQNYIVYRGKHAFIILNAFPYNTA 59

Query: 57  HLLIIPHVHQASVELLDLNTWLNMNALAPKVLKALY-AYGAQGINLGLNLHRNAGAGIPE 115
           H++++P+ H  SVELL  +  L++  L+   ++A+   Y   G N+G+N+ R AGAGI  
Sbjct: 60  HVMVVPYRHVPSVELLSNDEALDIFTLSTIAIRAIRDIYAPDGFNIGVNIGRVAGAGIES 119

Query: 116 HLHMHLVPRFLGDSNFMSVIAQTRVCGMDLNETYLTL 152
           H+H+H+VPR+ GDSNFM VI  T+V    L++T+  L
Sbjct: 120 HIHVHIVPRWNGDSNFMPVIFNTKVMPETLSDTFKKL 156
>ref|NP_661655.1| (NC_002932) Hit family protein [Chlorobium tepidum TLS]
 gb|AAM71997.1| (AE012845) Hit family protein [Chlorobium tepidum TLS]
          Length = 174

 Score =  122 bits (305), Expect = 2e-27
 Identities = 67/170 (39%), Positives = 95/170 (55%), Gaps = 16/170 (9%)

Query: 1   MQHLYAPWRESYLKG---------KNKSCVFCEISQNPAKDSENRVLYRNSDLFVVMNAY 51
           MQ +Y+PWR+ Y++          +    VF +I   P +D E  VL R    F ++N Y
Sbjct: 1   MQRMYSPWRDVYMQTFKEEKPFTPEEGKSVFADIP--PEQDEERYVLCRGEFCFAILNLY 58

Query: 52  PYNPGHLLIIPHVHQASVELLDLNTWL---NMNALAPKVLKALYAYGAQGINLGLNLHRN 108
           PYN GHL++IP++       LD  T +   NM+ L  K LK       QG N G NL R 
Sbjct: 59  PYNCGHLMVIPYLQTPDFGDLDAQTMVEIFNMSNLCMKALKMTIK--PQGFNFGANLGRV 116

Query: 109 AGAGIPEHLHMHLVPRFLGDSNFMSVIAQTRVCGMDLNETYLTLKNLLEK 158
           AG  I EH+H H+VPR+ GD+NFM V+ +T+V   DL +TY+ L+  ++K
Sbjct: 117 AGGSIDEHIHFHIVPRWEGDTNFMPVLGETKVLSNDLRQTYIQLREAIKK 166
>ref|NP_071036.1| (NC_000917) HIT family protein (hit) [Archaeoglobus fulgidus]
 pir||C69526 histidine triad protein AF2211 - Archaeoglobus fulgidus
 gb|AAB89043.1| (AE000953) HIT family protein (hit) [Archaeoglobus fulgidus]
          Length = 160

 Score =  118 bits (296), Expect = 2e-26
 Identities = 63/151 (41%), Positives = 90/151 (58%), Gaps = 3/151 (1%)

Query: 1   MQHLYAPWRESY-LKGKNKSCVFCEISQNPAKDSENRVLYRNSDLFVVMNAYPYNPGHLL 59
           M+ ++APWR  Y L  K K CVFC   +   +D EN +LYR    +V+MN  PYNPGH++
Sbjct: 1   MERIFAPWRIRYVLAPKPKECVFCTAPKEN-RDRENLILYRGKTCYVIMNRNPYNPGHVM 59

Query: 60  IIPHVHQASVELLDLNTWLNMNALAPKVLKALY-AYGAQGINLGLNLHRNAGAGIPEHLH 118
           + P+ H  S+E +     +    L    LKA+       G N+G+N+ + AGAGI  HLH
Sbjct: 60  VNPYRHIPSIEDMTEEEIVEAMKLVRLSLKAIREVMNPDGFNVGVNIGKVAGAGIAAHLH 119

Query: 119 MHLVPRFLGDSNFMSVIAQTRVCGMDLNETY 149
           +H+VPR+ GD++FM V+A  +V    L ETY
Sbjct: 120 IHVVPRWNGDTSFMPVLADVQVIPEALEETY 150
>ref|NP_625809.1| (NC_003888) conserved hypothetical protein SCL2.20c [Streptomyces
           coelicolor A3(2)]
 emb|CAB70932.1| (AL137778) conserved hypothetical protein SCL2.20c [Streptomyces
           coelicolor A3(2)]
          Length = 186

 Score =  113 bits (282), Expect = 9e-25
 Identities = 65/157 (41%), Positives = 90/157 (56%), Gaps = 13/157 (8%)

Query: 2   QHLYAPWRESYLKGKNK--------SCVFCEISQNPAKDSENRVLYRNSD-LFVVMNAYP 52
           Q L+ P R +Y++G+NK         C FC I   PAK  E+ ++ R  + ++ V+N YP
Sbjct: 18  QRLWTPHRMAYIQGENKPSGPGADDGCPFCSI---PAKSDEDGLIVRRGEHVYAVLNLYP 74

Query: 53  YNPGHLLIIPHVHQASVELLDLNTWLNMNALAPKVLKALYAY-GAQGINLGLNLHRNAGA 111
           YN GHL+I+P+ H A    L+      +  L  + + AL A  GAQG NLG+N    AGA
Sbjct: 75  YNGGHLMIVPYRHVADYTELNAVETAELAELTKQAMTALRAASGAQGFNLGMNQGAVAGA 134

Query: 112 GIPEHLHMHLVPRFLGDSNFMSVIAQTRVCGMDLNET 148
           GI  HLH H+VPR+ GD+NFM  I  T+V    L +T
Sbjct: 135 GIAAHLHQHVVPRWGGDTNFMPAIGHTKVLPQLLGDT 171
>ref|NP_280585.1| (NC_002607) histidine triad protein; Hit2 [Halobacterium sp. NRC-1]
 gb|AAG20065.1| (AE005086) histidine triad protein; Hit2 [Halobacterium sp. NRC-1]
          Length = 181

 Score =  103 bits (257), Expect = 7e-22
 Identities = 62/158 (39%), Positives = 89/158 (56%), Gaps = 12/158 (7%)

Query: 1   MQHLYAPWRESYLKGKNKS-----CVFCEISQNPAKDS--ENRVLYRNSDLFVVMNAYPY 53
           M+ ++APWR  +++  + +     CVFC     P ++   ++ V+ R     V++N YPY
Sbjct: 1   MEQVFAPWRIEWVERDDTTDDDVDCVFCAF---PGREHARQHLVVARTDHAAVMLNNYPY 57

Query: 54  NPGHLLIIPHVHQASVELLDLNTWLNMNALAPKVLKAL-YAYGAQGINLGLNLHRNAGAG 112
           NPGH ++IP VH      LD +T L+   L    L AL  A G    N GLNL   A  G
Sbjct: 58  NPGHCMVIPDVHTGDYGDLDADTLLDHARLKQATLDALDAALGPDAFNTGLNLGGGAAGG 117

Query: 113 -IPEHLHMHLVPRFLGDSNFMSVIAQTRVCGMDLNETY 149
            I +HLH H+VPR+ GD+NFM VI+ T+V    L++TY
Sbjct: 118 SIGDHLHTHVVPRWNGDTNFMPVISDTKVIVEALDDTY 155
>ref|NP_560819.1| (NC_003364) HIT family protein [Pyrobaculum aerophilum]
 gb|AAL65001.1| (AE009937) HIT family protein [Pyrobaculum aerophilum]
          Length = 150

 Score =  102 bits (253), Expect = 2e-21
 Identities = 47/126 (37%), Positives = 74/126 (58%), Gaps = 2/126 (1%)

Query: 1   MQHLYAPWRESYLKGKNKS-CVFCEISQNPAKDSENRVLYRNSDLFVVMNAYPYNPGHLL 59
           M+ +YAPWR  Y+K   K  C  C  +    +D EN V YR   +F ++N YPY  GH++
Sbjct: 1   MRVVYAPWRYRYIKSVGKGGCFLCSAAGEAGRDDENLVPYRGRHVFAILNKYPYTWGHVM 60

Query: 60  IIPHVHQASVELLDLNTWLNMNALAPKVLKALYAY-GAQGINLGLNLHRNAGAGIPEHLH 118
           + P+ H +  E +    W  M ALA K+ +A+    G++   +GLN+ R AGAG+  H+H
Sbjct: 61  VAPYRHISQFEEMTAEEWAEMIALAKKLAEAVSKLTGSRDFVIGLNIGRAAGAGLESHIH 120

Query: 119 MHLVPR 124
           +H++P+
Sbjct: 121 LHIIPK 126
>gb|AAG17335.1|AF265558_2 (AF265558) unknown [Mycobacterium smegmatis]
          Length = 205

 Score = 99.0 bits (245), Expect = 2e-20
 Identities = 56/160 (35%), Positives = 90/160 (56%), Gaps = 14/160 (8%)

Query: 1   MQHLYAPWRESYL-------KGKNKSC----VFCEISQNPAKDSENRVLYRNSDLFVVMN 49
           +Q L+ P R SY+       +G+  S      F +I + P  D E  ++ R   ++ V+N
Sbjct: 20  LQRLWTPHRMSYIAEAPMKKRGEGGSAGSAEPFTDIPEMP--DEEGLMVARGKRVYAVLN 77

Query: 50  AYPYNPGHLLIIPHVHQASVELLDLNTWLNMNALAPKVLKALYAYGA-QGINLGLNLHRN 108
            YPYNPGHL+++P+   + +E L  +    + A   K ++ + A     G N+GLNL  +
Sbjct: 78  LYPYNPGHLMVVPYRRVSELEDLTEDESSELMAFTQKAIRVIKAVSRPHGFNVGLNLGSS 137

Query: 109 AGAGIPEHLHMHLVPRFLGDSNFMSVIAQTRVCGMDLNET 148
           AG  + EHLHMH+VPR+ GD+NF+++I  ++V    L ET
Sbjct: 138 AGGSLAEHLHMHVVPRWGGDANFITIIGGSKVIPQLLKET 177
>ref|NP_217129.1| (NC_000962) hypothetical protein Rv2613c [Mycobacterium
           tuberculosis H37Rv]
 ref|NP_337190.1| (NC_002755) HIT family protein [Mycobacterium tuberculosis CDC1551]
 pir||D70571 hypothetical protein Rv2613c - Mycobacterium tuberculosis  (strain
           H37RV)
 emb|CAB08629.1| (Z95387) hypothetical protein Rv2613c [Mycobacterium tuberculosis
           H37Rv]
 gb|AAK47004.1| (AE007101) HIT family protein [Mycobacterium tuberculosis CDC1551]
          Length = 195

 Score = 94.7 bits (234), Expect = 3e-19
 Identities = 57/160 (35%), Positives = 90/160 (55%), Gaps = 15/160 (9%)

Query: 1   MQHLYAPWRESYL------KGKNKSCV----FCEISQNPAKDSENRVLYRNSDLFVVMNA 50
           +Q L+ P+R +YL      +  N S      F EI Q    D E  V+ R   ++ V+N 
Sbjct: 27  LQRLWTPYRMNYLAEAPVKRDPNSSASPAQPFTEIPQ--LSDEEGLVVARGKLVYAVLNL 84

Query: 51  YPYNPGHLLIIPHVHQASVE-LLDLNTWLNMNALAPKVLKALYAYGA-QGINLGLNLHRN 108
           YPYNPGHL+++P+   + +E L DL +   + A   K ++ +       G N+GLNL  +
Sbjct: 85  YPYNPGHLMVVPYRRVSELEDLTDLES-AELMAFTQKAIRVIKNVSRPHGFNVGLNLGTS 143

Query: 109 AGAGIPEHLHMHLVPRFLGDSNFMSVIAQTRVCGMDLNET 148
           AG  + EHLH+H+VPR+ GD+NF+++I  ++V    L +T
Sbjct: 144 AGGSLAEHLHVHVVPRWGGDANFITIIGGSKVIPQLLRDT 183
>dbj|BAB99063.1| (AP005279) Diadenosine tetraphosphate (Ap4A) hydrolase and other
           HIT family hydrolases [Corynebacterium glutamicum ATCC
           13032]
          Length = 220

 Score = 92.0 bits (227), Expect = 2e-18
 Identities = 48/155 (30%), Positives = 84/155 (53%), Gaps = 7/155 (4%)

Query: 1   MQHLYAPWRESYLKGKNKSCVFCEISQNP------AKDSENRVLYRNSDLFVVMNAYPYN 54
           ++ L+AP+R SY+  ++         ++P        D +  ++ R   ++ V+N YPYN
Sbjct: 32  LERLWAPYRMSYINTRSGGKQSTTAKRDPFIEVPKMSDEDGLIVARGELVYCVLNLYPYN 91

Query: 55  PGHLLIIPHVHQASVELLDLNTWLNMNALAPKVLKAL-YAYGAQGINLGLNLHRNAGAGI 113
            GH+++IP   + ++E L L     +       +KAL        +N+GLNL + +G  +
Sbjct: 92  AGHMMVIPFRKEKNLEDLSLAESAELMLFTQTAIKALKQVSNPDAVNVGLNLGKASGGSV 151

Query: 114 PEHLHMHLVPRFLGDSNFMSVIAQTRVCGMDLNET 148
            +HLH+H+VPR+ GD+NFM+VI   +V    L +T
Sbjct: 152 GDHLHVHVVPRWSGDANFMTVIDGVKVLPQTLRQT 186
>emb|CAB09619.1| (Z96801) hypothetical protein MLCL581.17c [Mycobacterium leprae]
          Length = 186

 Score = 90.5 bits (223), Expect = 6e-18
 Identities = 50/156 (32%), Positives = 84/156 (53%), Gaps = 10/156 (6%)

Query: 1   MQHLYAPWRESYLK-------GKNKSCVFCEISQNPAKDSENRVLYRNSDLFVVMNAYPY 53
           +Q L+ P+R +YL            +  F +I Q    D +  V+ R   ++ V+N YPY
Sbjct: 9   LQRLWTPYRMTYLAEAPVNHDNSTPAQPFTDIPQ--LSDEDGLVVARGELVYAVLNLYPY 66

Query: 54  NPGHLLIIPHVHQASVELLDLNTWLNMNALAPKVLKALYAYGA-QGINLGLNLHRNAGAG 112
           NPGHL+++P+   + +E L       +     K ++ +       G N+GLNL  +AG  
Sbjct: 67  NPGHLMVVPYRQVSELEDLTDAESAELMTFTQKAIRVIKNVSRPHGFNVGLNLGTSAGGS 126

Query: 113 IPEHLHMHLVPRFLGDSNFMSVIAQTRVCGMDLNET 148
           + EHLH+H+VPR+ GD+NF+++I  ++V    L +T
Sbjct: 127 LAEHLHVHVVPRWGGDANFITIIGGSKVIPQLLRDT 162
>ref|NP_301409.1| (NC_002677) conserved hypothetical protein [Mycobacterium leprae]
 emb|CAC29963.1| (AL583918) conserved hypothetical protein [Mycobacterium leprae]
          Length = 206

 Score = 90.5 bits (223), Expect = 6e-18
 Identities = 50/156 (32%), Positives = 84/156 (53%), Gaps = 10/156 (6%)

Query: 1   MQHLYAPWRESYLK-------GKNKSCVFCEISQNPAKDSENRVLYRNSDLFVVMNAYPY 53
           +Q L+ P+R +YL            +  F +I Q    D +  V+ R   ++ V+N YPY
Sbjct: 29  LQRLWTPYRMTYLAEAPVNHDNSTPAQPFTDIPQ--LSDEDGLVVARGELVYAVLNLYPY 86

Query: 54  NPGHLLIIPHVHQASVELLDLNTWLNMNALAPKVLKALYAYGA-QGINLGLNLHRNAGAG 112
           NPGHL+++P+   + +E L       +     K ++ +       G N+GLNL  +AG  
Sbjct: 87  NPGHLMVVPYRQVSELEDLTDAESAELMTFTQKAIRVIKNVSRPHGFNVGLNLGTSAGGS 146

Query: 113 IPEHLHMHLVPRFLGDSNFMSVIAQTRVCGMDLNET 148
           + EHLH+H+VPR+ GD+NF+++I  ++V    L +T
Sbjct: 147 LAEHLHVHVVPRWGGDANFITIIGGSKVIPQLLRDT 182
>ref|NP_600882.1| (NC_003450) COG0537:Diadenosine tetraphosphate (Ap4A) hydrolase and
           other HIT family hydrolases [Corynebacterium glutamicum]
          Length = 180

 Score = 84.7 bits (208), Expect = 3e-16
 Identities = 41/118 (34%), Positives = 68/118 (56%), Gaps = 1/118 (0%)

Query: 32  DSENRVLYRNSDLFVVMNAYPYNPGHLLIIPHVHQASVELLDLNTWLNMNALAPKVLKAL 91
           D +  ++ R   ++ V+N YPYN GH+++IP   + ++E L L     +       +KAL
Sbjct: 29  DEDGLIVARGELVYCVLNLYPYNAGHMMVIPFRKEKNLEDLSLAESAELMLFTQTAIKAL 88

Query: 92  -YAYGAQGINLGLNLHRNAGAGIPEHLHMHLVPRFLGDSNFMSVIAQTRVCGMDLNET 148
                   +N+GLNL + +G  + +HLH+H+VPR+ GD+NFM+VI   +V    L +T
Sbjct: 89  KQVSNPDAVNVGLNLGKASGGSVGDHLHVHVVPRWSGDANFMTVIDGVKVLPQTLRQT 146
>ref|NP_142915.1| (NC_000961) hypothetical protein [Pyrococcus horikoshii]
 pir||D71092 hypothetical protein PH1001 - Pyrococcus horikoshii
 dbj|BAA30098.1| (AP000004) 150aa long hypothetical protein [Pyrococcus horikoshii]
          Length = 150

 Score = 68.2 bits (165), Expect = 3e-11
 Identities = 38/113 (33%), Positives = 62/113 (54%), Gaps = 9/113 (7%)

Query: 20  CVFCEISQNPAKDSENRVLYRNSDLFVVMNAYPYNPGHLLIIPHVHQASVELLDLNTWLN 79
           C FC    NP K++   +LY +  + ++++ YP NPGHLLI+P  H   +E L      +
Sbjct: 3   CPFC----NPIKEN---ILYEDDTIRILLDNYPANPGHLLIVPRRHVTKLEELSEGEKAS 55

Query: 80  MNALAPKVLKAL-YAYGAQGINLGLNLHRNAGAGIPEHLHMHLVPRFLGDSNF 131
           +       ++AL       G N+G+N+ + AG  + EHLH+H++PRF  D  +
Sbjct: 56  LLRGIEIAIEALKKTLNPDGFNVGINIGKAAGQTV-EHLHIHVIPRFNNDCKY 107
>ref|NP_578836.1| (NC_003413) hit family protein (hit) [Pyrococcus furiosus DSM 3638]
 gb|AAL81231.1| (AE010221) hit family protein (hit) [Pyrococcus furiosus DSM 3638]
          Length = 146

 Score = 68.2 bits (165), Expect = 3e-11
 Identities = 36/110 (32%), Positives = 64/110 (57%), Gaps = 9/110 (8%)

Query: 20  CVFCEISQNPAKDSENRVLYRNSDLFVVMNAYPYNPGHLLIIPHVHQASVELLDLNTWLN 79
           C FC    NP  ++   ++Y +  + ++++++P NPGHLL++P  H  ++E L+    + 
Sbjct: 3   CPFC----NPPAEN---IVYEDDKIRILLDSFPANPGHLLVVPKRHITNIEGLNEEEKVM 55

Query: 80  MNALAPKVLKAL-YAYGAQGINLGLNLHRNAGAGIPEHLHMHLVPRFLGD 128
           +       +KAL  A    G N+G+NL + AG  +  HLH+H++PR+ GD
Sbjct: 56  LMKGVEMAIKALKEALNPDGFNVGINLGKAAGQTV-SHLHVHVIPRYKGD 104
>ref|NP_126658.1| (NC_000868) HIT-LIKE PROTEIN [Pyrococcus abyssi]
 pir||D75073 hit-like protein PAB0657 - Pyrococcus abyssi (strain Orsay)
 emb|CAB49889.1| (AJ248286) HIT-LIKE PROTEIN [Pyrococcus abyssi]
          Length = 147

 Score = 65.9 bits (159), Expect = 2e-10
 Identities = 36/113 (31%), Positives = 62/113 (54%), Gaps = 9/113 (7%)

Query: 20  CVFCEISQNPAKDSENRVLYRNSDLFVVMNAYPYNPGHLLIIPHVHQASVELLDLNTWLN 79
           C FC             V+Y +  + ++++ YP NPGHLL++P  H  S+  L  +  L 
Sbjct: 3   CPFCH-------PKPENVVYEDKFIRILLDNYPANPGHLLVVPKRHVTSIGNLTEDEKLA 55

Query: 80  MNALAPKVLKAL-YAYGAQGINLGLNLHRNAGAGIPEHLHMHLVPRFLGDSNF 131
           +       +KAL  A  A G N+G+N+ + AG  + +H+H+H++PR+ GD ++
Sbjct: 56  LLKGIELAVKALKRALKADGFNVGINIGKAAGQTV-DHIHIHVIPRYEGDCDY 107
>ref|NP_280841.1| (NC_002607) histidine triad protein; Hit1 [Halobacterium sp. NRC-1]
 gb|AAG20321.1| (AE005106) histidine triad protein; Hit1 [Halobacterium sp. NRC-1]
          Length = 142

 Score = 60.8 bits (146), Expect = 5e-09
 Identities = 48/138 (34%), Positives = 69/138 (49%), Gaps = 18/138 (13%)

Query: 20  CVFCEISQNPAKDSENRVLYRNSDLFVVMNAYPYNPGHLLIIPHVHQASVELLD------ 73
           CVFC+I    A +   RV++ ++D    ++A P  PGH L+IP  H A+  L D      
Sbjct: 5   CVFCQII---ADEIPARVVHEDADTLAFLDATPMAPGHTLVIPKTHAAT--LADTPGDDA 59

Query: 74  LNTWLNMNALAPKVLKALYAYGAQGINLGLNLHRNAGAGIPEHLHMHLVPRFLGDSNF-M 132
              +  ++ALAP V  A+    A    +G N    AG  +P H+H H++PRF  D    +
Sbjct: 60  TAVFETLHALAPTVEAAV---DADATTIGFNNGTAAGQEVP-HVHGHIIPRFADDDGGPL 115

Query: 133 SVIAQTR--VCGMDLNET 148
            V A TR  V   DL+ T
Sbjct: 116 HVAAGTRPDVSDADLDAT 133
>ref|NP_486506.1| (NC_003272) hypothetical protein [Nostoc sp. PCC 7120]
 dbj|BAB74165.1| (AP003589) ORF_ID:all2466~hypothetical protein [Nostoc sp. PCC
           7120]
          Length = 284

 Score = 60.8 bits (146), Expect = 5e-09
 Identities = 38/114 (33%), Positives = 63/114 (54%), Gaps = 14/114 (12%)

Query: 20  CVFCEISQNPAKDSENRVLYRNSDLFVVMNAYPYNPGHLLIIPHVHQASVELLDLN---- 75
           C+FC    NP K+   ++L  ++  + + + YP + GH+L+IP  H +    L       
Sbjct: 166 CIFC----NPHKNL--KLLTESATAYAIFDGYPISKGHILVIPKRHVSDYFELPQKEQSA 219

Query: 76  TWLNMNALAPKVLKALYAYGAQGINLGLNLHRNAGAGIPEHLHMHLVPRFLGDS 129
            WL +N  A + LKA +A    G N+G+N++R AG  I  H  +H++PR+ GD+
Sbjct: 220 CWLMVNK-AQEFLKAEFA--PDGFNIGMNINRAAGQNI-MHASIHIIPRYQGDA 269
>ref|NP_394598.1| (NC_002578) histidine triad (HIT) related protein [Thermoplasma
           acidophilum]
 emb|CAC12267.1| (AL445066) histidine triad (HIT) related protein [Thermoplasma
           acidophilum]
          Length = 147

 Score = 60.5 bits (145), Expect = 7e-09
 Identities = 36/111 (32%), Positives = 59/111 (52%), Gaps = 7/111 (6%)

Query: 17  NKSCVFCEISQNPAKDSENRVLYRNSDLFV-VMNAYPYNPGHLLIIPHVHQASVELLDLN 75
           + SCVFC    N      N  +   +D+ +  M+  P  PGH+L+IP  H  ++  +D  
Sbjct: 4   DSSCVFC----NEIITKRNAAIVAENDMVISFMDNAPVEPGHILVIPKEHFENIFDIDSR 59

Query: 76  TWLNMNALAPKVLKA-LYAYGAQGINLGLNLHRNAGAGIPEHLHMHLVPRF 125
            ++ +  +A +V KA + A GA GIN+G N    A   +  H H+H++PR+
Sbjct: 60  YYIEVQLMAKRVAKAVMKAMGADGINIGQNNGWCANQRV-MHFHVHVIPRW 109
>pir||B64408 histidine triad (HIT) protein MJ0866 - Methanococcus jannaschii
          Length = 129

 Score = 60.1 bits (144), Expect = 9e-09
 Identities = 39/136 (28%), Positives = 64/136 (46%), Gaps = 11/136 (8%)

Query: 20  CVFCEI--SQNPAKDSENRVLYRNSDLFVVMNAYPYNPGHLLIIPHVHQASVELLDLNTW 77
           C+FC+I   + PAK     V+Y +  +   ++  P N GH L++P  H    + +  +  
Sbjct: 2   CIFCKIINGEIPAK-----VVYEDEHVLAFLDINPRNKGHTLVVPKKHYERFDEMPDDEL 56

Query: 78  LNMNALAPKVLKALYAYGAQGINLGLNLHRNAGAGIPEHLHMHLVPRFLGDSNFMSVIAQ 137
            N      K ++ L   G  G N+  N  R AG  +  H+H H++PR+ GD     V+  
Sbjct: 57  CNFIKGVKKTVEVLKKLGFDGYNIVNNNGRVAGQEV-NHVHFHIIPRYXGDG---EVVKF 112

Query: 138 TRVCGMDLNETYLTLK 153
             V  +DL+E    +K
Sbjct: 113 GEVKNVDLDEVLKEIK 128
>ref|NP_247861.1| (NC_000909) HIT family protein (hit) [Methanococcus jannaschii]
           [Methanocaldococcus jannaschii]
 sp|Q58276|Y866_METJA Hypothetical HIT-like protein MJ0866
 gb|AAB98871.1| (U67530) HIT family protein (hit) [Methanococcus jannaschii]
           [Methanocaldococcus jannaschii]
          Length = 129

 Score = 59.3 bits (142), Expect = 1e-08
 Identities = 39/136 (28%), Positives = 64/136 (46%), Gaps = 11/136 (8%)

Query: 20  CVFCEI--SQNPAKDSENRVLYRNSDLFVVMNAYPYNPGHLLIIPHVHQASVELLDLNTW 77
           C+FC+I   + PAK     V+Y +  +   ++  P N GH L++P  H    + +  +  
Sbjct: 2   CIFCKIINGEIPAK-----VVYEDEHVLAFLDINPRNKGHTLVVPKKHYERFDEMPDDEL 56

Query: 78  LNMNALAPKVLKALYAYGAQGINLGLNLHRNAGAGIPEHLHMHLVPRFLGDSNFMSVIAQ 137
            N      K ++ L   G  G N+  N  R AG  +  H+H H++PR+ GD     V+  
Sbjct: 57  CNFIKGVKKTVEVLKKLGFDGYNIVNNNGRVAGQEV-NHVHFHIIPRYEGDG---EVVKF 112

Query: 138 TRVCGMDLNETYLTLK 153
             V  +DL+E    +K
Sbjct: 113 GEVKNVDLDEVLKEIK 128
>ref|NP_615770.1| (NC_003552) histidine triad protein [Methanosarcina acetivorans
           str. C2A] [Methanosarcina acetivorans C2A]
 gb|AAM04250.1| (AE010743) histidine triad protein [Methanosarcina acetivorans str.
           C2A] [Methanosarcina acetivorans C2A]
          Length = 150

 Score = 58.5 bits (140), Expect = 3e-08
 Identities = 33/112 (29%), Positives = 61/112 (54%), Gaps = 5/112 (4%)

Query: 18  KSCVFCEISQNPAKDSENRVLYRNSDLFVVMNAYPYNPGHLLIIPHVHQASVELLDLNTW 77
           ++C+FC+I      +  +  +Y +  ++  ++ YP + GH LI P  H ++   ++    
Sbjct: 14  ENCLFCKIITG---EIPSHRIYEDDAIYAFLDIYPASEGHTLIAPKKHLSNFTDMNAEDV 70

Query: 78  LNMNALAPKVLKAL-YAYGAQGINLGLNLHRNAGAGIPEHLHMHLVPRFLGD 128
             +   A KV  A+  A+ A+G N+G+N    AG  +P H+H+H++PR  GD
Sbjct: 71  ALLFEAARKVTAAVEKAFSAEGSNIGINNGEVAGQEVP-HVHVHVIPRKKGD 121
>ref|NP_377432.1| (NC_003106) 141aa long hypothetical histidine triad
           nucleotide-binding protein [Sulfolobus tokodaii]
 dbj|BAB66541.1| (AP000986) 141aa long hypothetical histidine triad
           nucleotide-binding protein [Sulfolobus tokodaii]
          Length = 141

 Score = 58.2 bits (139), Expect = 3e-08
 Identities = 32/110 (29%), Positives = 57/110 (51%), Gaps = 4/110 (3%)

Query: 19  SCVFCEISQNPAKDSENRVLYRNSDLFVVMNAYPYNPGHLLIIPHVHQASVELLDLNTWL 78
           +C+FC+I +   K  +   +Y + ++   ++  P N GH+L+IP  H  ++  +      
Sbjct: 5   NCIFCKIVKGEIKSQK---VYEDQEIMAFLDINPVNKGHVLVIPKDHYENIFDVPKEKLG 61

Query: 79  NMNALAPKVLKALYAYGAQGINLGLNLHRNAGAGIPEHLHMHLVPRFLGD 128
            +  +  KV  AL   GA G+N+  N  + A   I  HLH+H++PR+  D
Sbjct: 62  KVIEVVQKVAIALRKMGADGVNIVSNNGKAAEQHI-FHLHIHVIPRYFND 110
>ref|NP_633982.1| (NC_003901) Hit-like protein [Methanosarcina mazei Goe1]
 gb|AAM31654.1| (AE013433) Hit-like protein [Methanosarcina mazei Goe1]
          Length = 155

 Score = 57.4 bits (137), Expect = 6e-08
 Identities = 33/112 (29%), Positives = 59/112 (52%), Gaps = 5/112 (4%)

Query: 18  KSCVFCEISQNPAKDSENRVLYRNSDLFVVMNAYPYNPGHLLIIPHVHQASVELLDLNTW 77
           ++C+FC+I      +  ++ +Y +  +   ++ YP + GH LI P  H  S   +     
Sbjct: 7   ENCLFCKIISG---EIPSKKVYEDDAVCAFLDIYPASEGHTLIAPKKHFNSFTDMGAEDT 63

Query: 78  LNMNALAPKVLKAL-YAYGAQGINLGLNLHRNAGAGIPEHLHMHLVPRFLGD 128
             +   A K+  A+  A+ A+G N+G+N    AG  +P H+H+H++PR  GD
Sbjct: 64  ARLFEAARKITAAVEKAFSAEGSNIGINNGEVAGQEVP-HVHVHVIPRKKGD 114
>ref|NP_560536.1| (NC_003364) HIT family protein [Pyrobaculum aerophilum]
 gb|AAL64718.1| (AE009914) HIT family protein [Pyrobaculum aerophilum]
          Length = 137

 Score = 57.4 bits (137), Expect = 6e-08
 Identities = 30/106 (28%), Positives = 58/106 (54%), Gaps = 4/106 (3%)

Query: 20  CVFCEISQNPAKDSENRVLYRNSDLFVVMNAYPYNPGHLLIIPHVHQASVELLDLNTWLN 79
           C+FC+I +  A   +   +Y + +  V+++ YP + GH+L++   H  ++    +     
Sbjct: 3   CIFCKIIRGEAPAWK---VYEDEEFVVILDKYPASYGHVLVVSKKHFTNIVDAPVELSAR 59

Query: 80  MNALAPKVLKALYAYGAQGINLGLNLHRNAGAGIPEHLHMHLVPRF 125
              +A ++ KA    GA G+N+  N  R+AG  +  HLH+H++PR+
Sbjct: 60  GFEIAIRLAKAWAKLGAPGVNIVTNAGRSAGQAV-FHLHIHVIPRW 104
>ref|NP_249997.1| (NC_002516) probable HIT family protein [Pseudomonas aeruginosa]
 pir||F83481 probable HIT family protein PA1306 [imported] - Pseudomonas
           aeruginosa (strain PAO1)
 gb|AAG04695.1|AE004560_3 (AE004560) probable HIT family protein [Pseudomonas aeruginosa]
          Length = 153

 Score = 56.6 bits (135), Expect = 1e-07
 Identities = 38/118 (32%), Positives = 61/118 (51%), Gaps = 6/118 (5%)

Query: 13  LKGKNKSCVFCEISQNPAKDSENRVLYRNSDLFVVMNAYPYNPGHLLIIPHVHQASVELL 72
           + G    CVFC I+    ++  +R L+ +    V+++ +P  P H+LI+   H   +  L
Sbjct: 1   MSGFPMDCVFCAIAGG--REPAHR-LFEDEHFIVLLDIFPLRPAHVLIVAREHALHLSDL 57

Query: 73  DLNTWLNMNALAPKVLKAL--YAYGAQGINLGLNLHRNAGAGIPEHLHMHLVPRFLGD 128
                  + ALA ++ +AL    +G +GINL LN    A   +  HLH+HL+PR  GD
Sbjct: 58  SAAARDALLALAERIGRALRRAGFGVEGINLLLNDGVAANQHV-AHLHLHLIPRRRGD 114
>ref|NP_148648.1| (NC_000854) histidine triad (HIT) protein [Aeropyrum pernix]
 pir||G72481 probable histidine triad (HIT) protein APE2495 - Aeropyrum pernix
           (strain K1)
 dbj|BAA81511.1| (AP000064) 153aa long hypothetical histidine triad (HIT) protein
           [Aeropyrum pernix]
          Length = 153

 Score = 54.7 bits (130), Expect = 4e-07
 Identities = 34/110 (30%), Positives = 56/110 (50%), Gaps = 11/110 (10%)

Query: 20  CVFCEISQNPAKDSENRVLYRNSDLFVVMNAYPYNPGHLLIIPHVHQASVEL----LDLN 75
           C+FC I +  A   E   +Y+ + + V ++ YP + GHLL++P  H  S+      +   
Sbjct: 7   CIFCRIVKGEA---EAYTVYKGNGVTVFLDRYPASKGHLLVVPDEHYESIHTAPPRVAAK 63

Query: 76  TWLNMNALAPKVLKALYAYGAQGINLGLNLHRNAGAGIPEHLHMHLVPRF 125
            WL  +A+A    +     GA  +N+  N  R AG  I  H H+H++PR+
Sbjct: 64  VWLAASAIARYYREKA---GAPAVNVLTNSGRYAGQ-IIFHFHVHVIPRW 109
>ref|NP_109961.1| (NC_000912) nucleotidyl hydrolases/transferase [Mycoplasma
           pneumoniae]
 sp|P75504|YHIT_MYCPN Hypothetical 16.1 kDa HIT-like protein (A65_orf144)
 pir||S73888 histidine triad protein A65_orf144 - Mycoplasma pneumoniae  (strain
           ATCC 29342)
 gb|AAB96210.1| (AE000055) nucleotidyl hydrolases/transferase [Mycoplasma
           pneumoniae]
          Length = 144

 Score = 53.5 bits (127), Expect = 8e-07
 Identities = 37/136 (27%), Positives = 62/136 (45%), Gaps = 5/136 (3%)

Query: 17  NKSCVFCEISQNPAKDSENRVLYRNSDLFVVMNAYPYNPGHLLIIPHVHQASVELLDLNT 76
           N +C+FC I +   K  +   +  N   F  ++A+P   GH L+IP  H  +    D  +
Sbjct: 9   NNNCIFCGIVEGNVKSFK---VGENEHAFAFLDAFPVADGHTLVIPKKHAVNYSSTDDES 65

Query: 77  WLNMNALAPKV-LKALYAYGAQGINLGLNLHRNAGAGIPEHLHMHLVPRFLGDSNFMSVI 135
              ++ LA ++ LK        G+N  +N    AG  +  H HMH+VP++     F   +
Sbjct: 66  LKAVSLLAKEMALKLQQRLQPAGLNYVVNEGAKAGQEV-FHYHMHVVPKYETGLGFCYNV 124

Query: 136 AQTRVCGMDLNETYLT 151
            +T    ++ N   LT
Sbjct: 125 RKTNNRSIEANWELLT 140
>ref|NP_111736.1| (NC_002689) HIT (histidine triad) family protein [Thermoplasma
           volcanium]
          Length = 151

 Score = 52.8 bits (125), Expect = 1e-06
 Identities = 37/109 (33%), Positives = 55/109 (49%), Gaps = 7/109 (6%)

Query: 19  SCVFC-EISQNPAKDSENRVLYRNSDLFVVMNAYPYNPGHLLIIPHVHQASVELLDLNTW 77
           SCVFC EI Q         V+  N      M+  P  PGH+L+IP  H  ++  +D   +
Sbjct: 5   SCVFCTEIIQK----RNAAVVAENEYTIAFMDKAPVEPGHVLVIPKRHFINIFDIDDFYY 60

Query: 78  LNMNALAPKVLKA-LYAYGAQGINLGLNLHRNAGAGIPEHLHMHLVPRF 125
           + +  +  +V KA L A  A  +N+G N  R A   I  H H+H++PR+
Sbjct: 61  IEVQKMVKRVSKAVLEALSADALNVGQNNGRCANQ-IVMHYHVHVIPRW 108
>dbj|BAB60383.1| (AP000995) histidine triad protein [HIT] [Thermoplasma volcanium]
          Length = 157

 Score = 52.8 bits (125), Expect = 1e-06
 Identities = 37/109 (33%), Positives = 55/109 (49%), Gaps = 7/109 (6%)

Query: 19  SCVFC-EISQNPAKDSENRVLYRNSDLFVVMNAYPYNPGHLLIIPHVHQASVELLDLNTW 77
           SCVFC EI Q         V+  N      M+  P  PGH+L+IP  H  ++  +D   +
Sbjct: 11  SCVFCTEIIQK----RNAAVVAENEYTIAFMDKAPVEPGHVLVIPKRHFINIFDIDDFYY 66

Query: 78  LNMNALAPKVLKA-LYAYGAQGINLGLNLHRNAGAGIPEHLHMHLVPRF 125
           + +  +  +V KA L A  A  +N+G N  R A   I  H H+H++PR+
Sbjct: 67  IEVQKMVKRVSKAVLEALSADALNVGQNNGRCANQ-IVMHYHVHVIPRW 114
>ref|NP_378146.1| (NC_003106) 150aa long hypothetical histidine triad
           nucleotide-binding protein [Sulfolobus tokodaii]
 dbj|BAB67255.1| (AP000989) 150aa long hypothetical histidine triad
           nucleotide-binding protein [Sulfolobus tokodaii]
          Length = 150

 Score = 52.0 bits (123), Expect = 2e-06
 Identities = 34/110 (30%), Positives = 54/110 (48%), Gaps = 5/110 (4%)

Query: 20  CVFCEISQNPAKDSENRVLYRNSDLFVVMNAYPYNPGHLLIIPHVHQASVELLDLNTWLN 79
           C FC I     ++ E   +Y +     +++ YP + GH L+IP  H  +    D +T   
Sbjct: 2   CTFCSIIN---RELEGYFVYEDEKFAAILDKYPVSLGHTLVIPKKHFENYLEADEDTLAE 58

Query: 80  MNALAPKV-LKALYAYGAQGINLGLNLHRNAGAGIPEHLHMHLVPRFLGD 128
           +  +   V L    A  A G+ L  N+ R+AG  I  HLH+H++P + GD
Sbjct: 59  LAKVVKLVSLGIKDAVKADGLRLLTNIGRSAGQVI-FHLHVHIIPTWEGD 107
>ref|NP_269754.1| (NC_002737) putative cell-cycle regulation histidine triad (HIT)
           protein [Streptococcus pyogenes] [Streptococcus pyogenes
           M1 GAS]
 ref|NP_607768.1| (NC_003485) putative cell-cycle regulation histidine triad (HIT)
           protein [Streptococcus pyogenes MGAS8232]
 gb|AAK34475.1| (AE006602) putative cell-cycle regulation histidine triad (HIT)
           protein [Streptococcus pyogenes M1 GAS]
 gb|AAL98267.1| (AE010084) putative cell-cycle regulation histidine triad (HIT)
           protein [Streptococcus pyogenes MGAS8232]
          Length = 139

 Score = 51.6 bits (122), Expect = 3e-06
 Identities = 32/109 (29%), Positives = 55/109 (50%), Gaps = 5/109 (4%)

Query: 18  KSCVFCEISQNPAKDSENRVLYRNSDLFVVMNAYPYNPGHLLIIPHVHQASVELLDLNTW 77
           ++C+FC I Q     S+   +Y +  +   ++      GH L+IP  H  ++  +   T 
Sbjct: 2   ENCIFCSIIQGDIPSSK---VYEDEQVLAFLDISQTTKGHTLVIPKQHVRNLLEMTAETA 58

Query: 78  LNMNALAPKVLKALY-AYGAQGINLGLNLHRNAGAGIPEHLHMHLVPRF 125
            ++ A  PK+ +A+  A GA  +N+  N    AG  +  H H+HLVPR+
Sbjct: 59  SHLFARIPKIARAIQSATGATAMNIINNNEALAGQTV-FHAHVHLVPRY 106
>ref|NP_242055.1| (NC_002570) Hit-like protein involved in cell-cycle regulation
           [Bacillus halodurans]
 dbj|BAB04908.1| (AP001511) Hit-like protein involved in cell-cycle regulation
           [Bacillus halodurans]
          Length = 142

 Score = 51.2 bits (121), Expect = 4e-06
 Identities = 31/108 (28%), Positives = 57/108 (52%), Gaps = 5/108 (4%)

Query: 19  SCVFCEISQNPAKDSENRVLYRNSDLFVVMNAYPYNPGHLLIIPHVHQASVELLDLNTWL 78
           +C+FC+I    A +  +  +Y +  ++  ++      GH L+IP VH+ +V  L      
Sbjct: 6   NCIFCKII---AGEIPSATVYEDDHVYAFLDISQVTKGHTLVIPKVHKRNVFELSEEIAS 62

Query: 79  NMNALAPKVLKALY-AYGAQGINLGLNLHRNAGAGIPEHLHMHLVPRF 125
           ++ A  PK+ +A+  A+   G+N+  N    AG  +  H H+HL+PR+
Sbjct: 63  SLFAAVPKISRAINDAFQPIGMNIVNNNGEAAGQTV-FHYHLHLLPRY 109
>gb|AAK96091.1|AF393466_28 (AF393466) HIT superfamily hydrolase [uncultured crenarchaeote
           74A4]
          Length = 135

 Score = 50.1 bits (118), Expect = 9e-06
 Identities = 32/112 (28%), Positives = 58/112 (51%), Gaps = 9/112 (8%)

Query: 20  CVFCEI--SQNPAKDSENRVLYRNSDLFVVMNAYPYNPGHLLIIPHVHQASVELLDLNTW 77
           C+FC+I   Q PAK     +L+  S     ++A+P   GH+L+IP  H   ++ +  +  
Sbjct: 3   CIFCKIISRQIPAK-----ILHETSHSICFLDAFPLTKGHVLVIPKNHHKKIQDMSSSEN 57

Query: 78  LNMNALAPKVLKALYAYGAQGINLGLNLHRNAGAGIPEHLHMHLVPRFLGDS 129
            ++ +L   ++  + +     + + ++    AG  IP H+H+HLVPR   DS
Sbjct: 58  SDLFSLVHVMMSKVDSITGSTL-IAIHNGETAGQEIP-HVHVHLVPRSESDS 107
>ref|NP_345039.1| (NC_003028) HIT family protein [Streptococcus pneumoniae TIGR4]
 ref|NP_358052.1| (NC_003098) Conserved hypothetical protein [Streptococcus
           pneumoniae R6]
 gb|AAK74679.1| (AE007363) HIT family protein [Streptococcus pneumoniae TIGR4]
 gb|AAK99262.1| (AE008426) Conserved hypothetical protein [Streptococcus pneumoniae
           R6]
          Length = 136

 Score = 49.7 bits (117), Expect = 1e-05
 Identities = 31/112 (27%), Positives = 53/112 (46%), Gaps = 5/112 (4%)

Query: 20  CVFCEISQNPAKDSENRVLYRNSDLFVVMNAYPYNPGHLLIIPHVHQASVELLDLNTWLN 79
           C+FC+I       S+   +Y +  +   ++      GH L++P  H  ++  +D  +   
Sbjct: 4   CIFCKIIAGEIPASK---VYEDEQVLAFLDISQVTLGHTLVVPKEHYRNLLEMDATSASQ 60

Query: 80  MNALAPKVL-KALYAYGAQGINLGLNLHRNAGAGIPEHLHMHLVPRFLGDSN 130
           + A  PKV  K +    A G+N+  N    AG  +  H H+HLVPR+  D +
Sbjct: 61  LFAQVPKVAQKVMKVTKAAGMNIISNCEEVAGQTV-FHTHVHLVPRYSADDD 111
>ref|NP_471651.1| (NC_003212) similar to histidine triad (HIT) protein [Listeria
           innocua]
 emb|CAC97547.1| (AL596171) similar to histidine triad (HIT) protein [Listeria
           innocua]
          Length = 140

 Score = 49.3 bits (116), Expect = 2e-05
 Identities = 30/113 (26%), Positives = 54/113 (47%), Gaps = 5/113 (4%)

Query: 20  CVFCEISQNPAKDSENRVLYRNSDLFVVMNAYPYNPGHLLIIPHVHQASVELLDLNTWLN 79
           C+FC+I +     ++   +Y + +++  ++      GH L+IP  H  +   L   T   
Sbjct: 4   CIFCKIVRGEIPSAK---VYEDDEVYAFLDLGQVTEGHTLVIPKKHARNTFDLPEETAAE 60

Query: 80  MNALAPKVLKAL-YAYGAQGINLGLNLHRNAGAGIPEHLHMHLVPRFLGDSNF 131
           +    PK+ +AL  A   QG+N+ LN +         H H+HL+PR+    +F
Sbjct: 61  LFRRVPKIARALKEALPLQGLNI-LNNNEEVAYQSVFHCHIHLIPRYSKSDDF 112
>ref|NP_072794.1| (NC_000908) hit protein, putative [Mycoplasma genitalium]
 sp|P47378|YHIT_MYCGE Hypothetical HIT-like protein MG132
 pir||F64214 histidine triad protein MG132 - Mycoplasma genitalium
 gb|AAC71349.1| (U39693) hit protein, putative [Mycoplasma genitalium]
          Length = 141

 Score = 48.9 bits (115), Expect = 2e-05
 Identities = 34/134 (25%), Positives = 56/134 (41%), Gaps = 5/134 (3%)

Query: 14  KGKNKSCVFCEISQNPAKDSENRVLYRNSDLFVVMNAYPYNPGHLLIIPHVHQASVELLD 73
           K    SC+FC+I Q      +   +  N      ++A+P   GH L+IP  H       D
Sbjct: 3   KNTTSSCIFCDIVQGSITSYK---IGENEHAIAFLDAFPVADGHTLVIPKKHAVDFSSTD 59

Query: 74  LNTWLNMNALAPKV-LKALYAYGAQGINLGLNLHRNAGAGIPEHLHMHLVPRFLGDSNFM 132
                 ++ LA ++ LK        G+N   N    AG  +  H H+H+VP++     F 
Sbjct: 60  QKELQAVSLLAKQIALKLKMTLKPSGLNYVSNEGAIAGQ-VVFHFHLHIVPKYETGKGFG 118

Query: 133 SVIAQTRVCGMDLN 146
             + +T    ++ N
Sbjct: 119 YNVNKTNKRSLEEN 132
>ref|NP_212513.1| (NC_001318) protein kinase C1 inhibitor (pkcI) [Borrelia
           burgdorferi]
 pir||B70147 protein kinase C inhibitor homolog - Lyme disease spirochete
 gb|AAC66761.1| (AE001143) protein kinase C1 inhibitor (pkcI) [Borrelia
           burgdorferi]
          Length = 149

 Score = 48.9 bits (115), Expect = 2e-05
 Identities = 34/114 (29%), Positives = 55/114 (47%), Gaps = 11/114 (9%)

Query: 20  CVFCEISQNPAKDSENRVLYRNSDLFVVMNAYPYNPGHLLIIPHVHQASVELLDLNTWLN 79
           C+FC+I     K+  +  +Y +  +   ++  P   GH L+IP  H  S  LL+++   N
Sbjct: 14  CIFCKIIN---KELPSYKVYEDDLVLAFLDINPLTVGHTLVIPKEHSES--LLNMDDKFN 68

Query: 80  MNAL--APKVLKALYAYGAQGINLGLNLHRNAGAGIPE---HLHMHLVPRFLGD 128
              L    K+  AL    +  I  G+N++   GAG  +   H H H++PRF  D
Sbjct: 69  ERVLKVCKKISNALKRINS-SIYGGINIYSALGAGAGQEVFHTHFHVIPRFKND 121
>sp|P94252|YHIT_BORBU Hypothetical HIT-like protein BB0379
 gb|AAC44716.1|AAC44716 (U49938) protein kinase C1 inhibitor Pkci [Borrelia burgdorferi]
          Length = 139

 Score = 48.9 bits (115), Expect = 2e-05
 Identities = 34/114 (29%), Positives = 55/114 (47%), Gaps = 11/114 (9%)

Query: 20  CVFCEISQNPAKDSENRVLYRNSDLFVVMNAYPYNPGHLLIIPHVHQASVELLDLNTWLN 79
           C+FC+I     K+  +  +Y +  +   ++  P   GH L+IP  H  S  LL+++   N
Sbjct: 4   CIFCKIIN---KELPSYKVYEDDLVLAFLDINPLTVGHTLVIPKEHSES--LLNMDDKFN 58

Query: 80  MNAL--APKVLKALYAYGAQGINLGLNLHRNAGAGIPE---HLHMHLVPRFLGD 128
              L    K+  AL    +  I  G+N++   GAG  +   H H H++PRF  D
Sbjct: 59  ERVLKVCKKISNALKRINS-SIYGGINIYSALGAGAGQEVFHTHFHVIPRFKND 111
>ref|NP_465740.1| (NC_003210) similar to histidine triad (HIT) protein [Listeria
           monocytogenes EGD-e]
 emb|CAD00294.1| (AL591982) similar to histidine triad (HIT) protein [Listeria
           monocytogenes]
          Length = 140

 Score = 48.9 bits (115), Expect = 2e-05
 Identities = 30/113 (26%), Positives = 54/113 (47%), Gaps = 5/113 (4%)

Query: 20  CVFCEISQNPAKDSENRVLYRNSDLFVVMNAYPYNPGHLLIIPHVHQASVELLDLNTWLN 79
           C+FC+I +     ++   +Y + +++  ++      GH L+IP  H  +   L   T   
Sbjct: 4   CIFCKIVRGEIPSAK---VYEDDEVYAFLDLGQVTEGHTLVIPKKHARNTFDLPDETAAE 60

Query: 80  MNALAPKVLKAL-YAYGAQGINLGLNLHRNAGAGIPEHLHMHLVPRFLGDSNF 131
           +    PK+ +AL  A   QG+N+ LN +         H H+HL+PR+    +F
Sbjct: 61  LFRRVPKIARALKEALPIQGLNI-LNNNEEVAFQSVFHCHIHLIPRYSKSDDF 112
>ref|NP_343549.1| (NC_002754) Histidine triad (Hit) family protein, putative
           [Sulfolobus solfataricus]
 sp|P95937|YHIT_SULSO Hypothetical hit-like protein SSO2163
 pir||S74070 histidine triad (HIT) protein c0139 - Sulfolobus solfataricus
 emb|CAA69441.1| (Y08256) HIT protein [Sulfolobus solfataricus]
 gb|AAK42339.1| (AE006822) Histidine triad (Hit) family protein, putative
           [Sulfolobus solfataricus]
          Length = 139

 Score = 48.5 bits (114), Expect = 3e-05
 Identities = 29/114 (25%), Positives = 53/114 (46%), Gaps = 5/114 (4%)

Query: 20  CVFCEISQNPAKDSENRVLYRNSDLFVVMNAYPYNPGHLLIIPHVHQASVELLDLNTWLN 79
           C+FC I +         ++Y N  +   ++ +P  PGH L++P  H  +   +  +    
Sbjct: 2   CIFCNIVEGR---DHGYIVYSNDRVVAFLDKFPITPGHTLVVPRTHYENFLEISEDVIPY 58

Query: 80  MNALAPKVLKAL-YAYGAQGINLGLNLHRNAGAGIPEHLHMHLVPRFLGDSNFM 132
           +     K+  A+  A  A GI +  N+ ++AG  +  H H H+VP +  D + M
Sbjct: 59  LCTAVRKISIAVKKALKADGIRILTNIGKSAGQ-VVFHSHFHIVPTWSQDPDIM 111
>ref|NP_348235.1| (NC_003030) HIT family hydrolase [Clostridium acetobutylicum]
 gb|AAK79575.1|AE007670_7 (AE007670) HIT family hydrolase [Clostridium acetobutylicum]
          Length = 122

 Score = 48.1 bits (113), Expect = 3e-05
 Identities = 35/119 (29%), Positives = 57/119 (47%), Gaps = 19/119 (15%)

Query: 16  KNKSCVFCEISQNPAKDSENRVLYRNSDLFVVMNAYPYNPGHLLII-----PHVHQASVE 70
           +N +C FC         +   ++  N   F +++  P N GH LII     P   +AS E
Sbjct: 2   ENNNCPFCS-------SNNFDIICENKLAFAILDKNPVNEGHTLIITKRHFPFFFEASGE 54

Query: 71  LLDLNTWLNMNALAPKVLKAL-YAYGAQGINLGLNLHRNAGAGIPEHLHMHLVPRFLGD 128
            +     + M +L  +    L   Y   G N+G+N+   AG  + +H+H+HL+PR+ GD
Sbjct: 55  EV-----MAMYSLLHEAKGILDIQYEPSGYNIGVNVGYYAGQTV-KHMHIHLIPRYKGD 107
>ref|NP_325839.1| (NC_002771) HIT-LIKE PROTEIN (CELL CYCLE REGULATION) [Mycoplasma
           pulmonis]
 emb|CAC13181.1| (AL445563) HIT-LIKE PROTEIN (CELL CYCLE REGULATION) [Mycoplasma
           pulmonis]
          Length = 116

 Score = 47.4 bits (111), Expect = 6e-05
 Identities = 23/89 (25%), Positives = 48/89 (53%), Gaps = 2/89 (2%)

Query: 36  RVLYRNSDLFVVMNAYPYNPGHLLIIPHVHQASVELLDLNTWLNMNALAPKVLK-ALYAY 94
           +++Y +     +M+ +PYNPGH L+IP  H  +++ ++  +  ++  +A K+ K  +   
Sbjct: 20  QIIYEDDQAIAIMDKFPYNPGHFLVIPKKHSTNLKDIEEQSINHLMKIAIKLAKEKIENK 79

Query: 95  GAQGINLGLNLHRNAGAGIPEHLHMHLVP 123
             +   L +N    AG  +  H H+H++P
Sbjct: 80  EFEDFKLIINNGEKAGQ-VVYHTHIHIIP 107
>ref|NP_010591.1| (NC_001136) Fhit homolog, member of the histidine triad superfamily
           of nucleotide binding-proteins; Hnt2p [Saccharomyces
           cerevisiae]
 sp|P49775|HNT2_YEAST HIT FAMILY PROTEIN 2
 pir||S61191 asymmetrical hydrolase homolog YDR305c - yeast  (Saccharomyces
           cerevisiae)
 gb|AAB64741.1| (U28374) Hnt2p: yeast homolog of histidine triad nucleotide-binding
           protein (HINT) [Saccharomyces cerevisiae]
          Length = 217

 Score = 45.4 bits (106), Expect = 2e-04
 Identities = 28/95 (29%), Positives = 48/95 (50%), Gaps = 9/95 (9%)

Query: 36  RVLYRNSDLFVVMNAYPYNPGHLLIIPHVHQASVELLDL-----NTWLNMNALAPKVLKA 90
           +V Y++   + ++N  P  PGH+LI+P +    + L DL       +     L  + +K 
Sbjct: 26  QVFYKSKYTYALVNLKPIVPGHVLIVP-LRTTVLNLSDLTMPESQDYFKTLQLIHRFIK- 83

Query: 91  LYAYGAQGINLGLNLHRNAGAGIPEHLHMHLVPRF 125
            + Y A  IN+ +     AG  +P HLH H++PR+
Sbjct: 84  -WQYKADSINVAIQDGPEAGQSVP-HLHTHIIPRY 116
>ref|NP_078106.1| (NC_002162) probable HIT protein [Ureaplasma urealyticum]
 pir||D82911 probable HIT protein UU272 [imported] - Ureaplasma urealyticum
 gb|AAF30681.1|AE002124_3 (AE002124) probable HIT protein [Ureaplasma urealyticum]
          Length = 152

 Score = 45.1 bits (105), Expect = 3e-04
 Identities = 26/108 (24%), Positives = 51/108 (47%), Gaps = 4/108 (3%)

Query: 18  KSCVFCEISQNPAKDSENRVLYRNSDLFVVMNAYPYNPGHLLIIPHVHQASVELLDLNTW 77
           + C+FC+I +    +  ++++  N     +++  P + GH+LIIP  H  +  L D    
Sbjct: 2   QDCIFCKILKG---EIISKIIDENEFAIAILDIQPASDGHMLIIPKKHYRNFSLTDPIYL 58

Query: 78  LNMNALAPKVLKALYAYGAQGINLGLNLHRNAGAG-IPEHLHMHLVPR 124
             M  LA  +   L       +     ++ N+ AG +  H H+H++P+
Sbjct: 59  DGMMRLAKNMTFVLEEVFPNVLGFNYLMNSNSSAGQVIMHTHLHIIPK 106
>ref|NP_268155.1| (NC_002662) HYPOTHETICAL PROTEIN [Lactococcus lactis subsp. lactis]
 gb|AAK06096.1|AE006430_1 (AE006430) HYPOTHETICAL PROTEIN [Lactococcus lactis subsp. lactis]
          Length = 133

 Score = 44.7 bits (104), Expect = 4e-04
 Identities = 29/119 (24%), Positives = 58/119 (48%), Gaps = 11/119 (9%)

Query: 18  KSCVFCEISQNPAKDSENRVLYRNSDLFVVMNAYPYNPGHLLIIPHVHQASVELL----D 73
           + C+FC+I    A +  +  +Y + D+   ++      GH L++P  H  ++  +     
Sbjct: 2   EDCIFCKII---AGEIPSTKIYEDDDVLAFLDITQTTKGHTLVVPKKHYRNILSMTGEQS 58

Query: 74  LNTWLNMNALAPKVLKALYAYGAQGINLGLNLHRNAGAGIPEHLHMHLVPRFLGDSNFM 132
              +  +  +A K++  L+A   +G+N+  N    AG  +  H H+HL+PRF  +  F+
Sbjct: 59  AELFSKVPFIANKIVNNLHA---KGMNILQNNEEIAGQTV-FHTHIHLIPRFDENDGFV 113
>ref|NP_372362.1| (NC_002758) Hit-like protein involved in cell-cycle regulation
           [Staphylococcus aureus subsp. aureus Mu50]
 ref|NP_374945.1| (NC_002745) Hit-like protein involved in cell-cycle regulation
           [Staphylococcus aureus subsp. aureus N315]
 ref|NP_646595.1| (NC_003923) Hit-like protein involved in cell-cycle regulation
           [Staphylococcus aureus subsp. aureus MW2]
 dbj|BAB42924.1| (AP003135) Hit-like protein involved in cell-cycle regulation
           [Staphylococcus aureus subsp. aureus N315]
 dbj|BAB58000.1| (AP003363) Hit-like protein involved in cell-cycle regulation
           [Staphylococcus aureus subsp. aureus Mu50]
 dbj|BAB95643.1| (AP004828) Hit-like protein involved in cell-cycle regulation
           [Staphylococcus aureus subsp. aureus MW2]
          Length = 140

 Score = 44.3 bits (103), Expect = 5e-04
 Identities = 26/92 (28%), Positives = 45/92 (48%), Gaps = 2/92 (2%)

Query: 38  LYRNSDLFVVMNAYPYNPGHLLIIPHVHQASVELLDLNTWLNMNALAPKVLKAL-YAYGA 96
           +Y +  ++  ++      GH L+IP    A++   D  T  ++ A  PKV  A+  A+  
Sbjct: 19  VYEDDYVYAFLDISQVTKGHTLLIPKKASANIFETDEETMKHIGAALPKVANAIKRAFNP 78

Query: 97  QGINLGLNLHRNAGAGIPEHLHMHLVPRFLGD 128
            G+N+  N    A   +  H+H HL+PR+  D
Sbjct: 79  DGLNIIQNNGEFADQSV-FHIHFHLIPRYEND 109
>ref|NP_273646.1| (NC_003112) hitA protein [Neisseria meningitidis MC58]
 pir||F81181 hitA protein NMB0602 [imported] - Neisseria meningitidis  (group B
           strain MD58)
 gb|AAF41029.1| (AE002415) hitA protein [Neisseria meningitidis MC58]
          Length = 107

 Score = 44.3 bits (103), Expect = 5e-04
 Identities = 30/105 (28%), Positives = 52/105 (48%), Gaps = 5/105 (4%)

Query: 19  SCVFCEISQNPAKDSENRVLYRNSDLFVVMNAYPYNPGHLLIIPHVHQASVELLDLNTWL 78
           +C+FC+I+   AKD   + +Y + ++    +  P  P HLL+IP VH  S+        +
Sbjct: 3   NCIFCKIA---AKDIPAQTVYEDGEMVCFKDINPAAPVHLLLIPKVHFDSLAHAAPEHQM 59

Query: 79  NMNALAPKVLKALYAYG-AQGINLGLNLHRNAGAGIPEHLHMHLV 122
            +  +  KV +   A G A G    +N  +  G  +  HLH+H++
Sbjct: 60  LLGKMMLKVPEIAKAAGLADGFKTLINTGKGGGQEV-FHLHIHIM 103
>ref|NP_597168.1| (NC_003235) HIT FAMILY PROTEIN [Encephalitozoon cuniculi]
 emb|CAD26344.1| (AL590448) HIT FAMILY PROTEIN [Encephalitozoon cuniculi]
          Length = 131

 Score = 43.9 bits (102), Expect = 6e-04
 Identities = 25/115 (21%), Positives = 48/115 (41%), Gaps = 11/115 (9%)

Query: 18  KSCVFCEISQNPAKDSENRVLYRNSDLFVVMNAYPYNPGHLLIIPHVHQASVELLDLNTW 77
           + C+FC + +  A      ++Y    LF +++ YP + GH L+IP  H   +        
Sbjct: 2   EGCIFCTLYRKGAN-----IIYETDRLFALIDRYPLSKGHFLVIPKAHHPYLHNYKPE-- 54

Query: 78  LNMNALAPKVLKALYAYGAQGINLGLNLHRNAGAGIPEHLHMHLVPRFLGDSNFM 132
             ++ +   +   +  +G +  N+   L  N       H+H H++P    D   M
Sbjct: 55  -ELSGVLDTIRHLVQKFGFERYNI---LQNNGNHQEVFHVHFHVIPFVSADERLM 105
>ref|NP_102422.1| (NC_002678) probable Hit-like protein involved in cell-cycle
           regulation [Mesorhizobium loti]
 dbj|BAB48208.1| (AP002995) probable Hit-like protein involved in cell-cycle
           regulation [Mesorhizobium loti]
          Length = 143

 Score = 43.9 bits (102), Expect = 6e-04
 Identities = 30/93 (32%), Positives = 47/93 (50%), Gaps = 6/93 (6%)

Query: 38  LYRNSDLFVVMNAYPYNPGHLLIIPHVHQASVELLDLN--TWLNMNALAPKVLKAL-YAY 94
           +Y +  +   M+  P  PGH L++P     S  LLD N  T+  +  +  KV +A+  A 
Sbjct: 25  VYEDDAVVAFMDVMPQGPGHTLVVPKA--PSRNLLDANPSTFGPLFNVVQKVAQAVKKAL 82

Query: 95  GAQGINLGLNLHRNAGAGIPEHLHMHLVPRFLG 127
            A G+ + L  +  A      HLH+H++PRF G
Sbjct: 83  NADGVTI-LQFNEPASGQTVYHLHVHVIPRFDG 114
>ref|NP_388884.1| (NC_000964) Hit-like protein [Bacillus subtilis]
 sp|O07513|HIT_BACSU Hit protein
 pir||A69642 cell-cycle regulation histidine triad (HIT) protein - Bacillus
           subtilis
 emb|CAA74410.1| (Y14077) Hypothetical protein [Bacillus subtilis]
 emb|CAB12843.1| (Z99109) Hit-like protein [Bacillus subtilis]
          Length = 145

 Score = 43.5 bits (101), Expect = 8e-04
 Identities = 33/119 (27%), Positives = 57/119 (47%), Gaps = 7/119 (5%)

Query: 18  KSCVFCEISQNPAKDSENRVLYRNSDLFVVMNAYPYNPGHLLIIPHVHQASV-ELLDLNT 76
           ++C+FC+I    A D  +  +Y +  +   ++      GH L+IP  H  +V E  D   
Sbjct: 5   ENCIFCKII---AGDIPSAKVYEDEHVLAFLDISQVTKGHTLVIPKTHIENVYEFTDELA 61

Query: 77  WLNMNALAPKVLKALY-AYGAQGINLGLNLHRNAGAGIPEHLHMHLVPRFLGDSNFMSV 134
               +A+ PK+ +A+   +   G+N   N    AG  +  H HMH++PR+     F +V
Sbjct: 62  KQYFHAV-PKIARAIRDEFEPIGLNTLNNNGEKAGQSV-FHYHMHIIPRYGKGDGFGAV 118
>ref|NP_213096.1| (NC_000918) protein kinase C inhibitor (HIT family) [Aquifex
           aeolicus]
 sp|O66536|YHIT_AQUAE Hypothetical HIT-like protein AQ_141
 pir||E70313 histidine triad-like protein pkcI - Aquifex aeolicus
 gb|AAC06496.1| (AE000675) protein kinase C inhibitor (HIT family) [Aquifex
           aeolicus]
          Length = 121

 Score = 43.1 bits (100), Expect = 0.001
 Identities = 32/115 (27%), Positives = 53/115 (45%), Gaps = 13/115 (11%)

Query: 16  KNKSCVFCEISQN--PAKDSENRVLYRNSDLFVVMNAYPYNPGHLLIIPHVHQASVELLD 73
           + K C+FC+I +   PAK      +Y +  +    +  P  P H+LIIP  H   ++ L+
Sbjct: 2   QEKDCIFCKIVRGEVPAKK-----VYEDDKVLAFHDINPVAPVHILIIPKKHIMGIQTLE 56

Query: 74  LNTWL---NMNALAPKVLKALYAYGAQGINLGLNLHRNAGAGIPE---HLHMHLV 122
                   +M  +A K+ + L     + +N G  L  N G    +   HLH+HL+
Sbjct: 57  PEDECLVGHMFYVARKIAEDLGIAPDENLNKGYRLVFNVGKDAGQSVFHLHLHLI 111
>ref|NP_588328.1| (NC_003421) hypothetical HIT-family protein [Schizosaccharomyces
           pombe]
 pir||T40979 hypothetical HIT-family protein - fission yeast
           (Schizosaccharomyces pombe)
 emb|CAA21448.1| (AL031966) hypothetical HIT-family protein [Schizosaccharomyces
           pombe]
          Length = 133

 Score = 42.4 bits (98), Expect = 0.002
 Identities = 30/106 (28%), Positives = 51/106 (47%), Gaps = 7/106 (6%)

Query: 19  SCVFCEISQNPAKDSENRVLYRNSDLFVVMNAYPYNPGHLLIIPHVHQASVELLDLNTWL 78
           SC+FC+I +    D     L   +     ++  P + GH L+IP  H A +  L   +  
Sbjct: 2   SCIFCKIVKG---DIPCVKLAETALSLAFLDIAPTSKGHALVIPKEHAAKMHELSDESCA 58

Query: 79  NMNALAPKVLKALYAYGAQGINLGLNLHRNAGAGIPEHLHMHLVPR 124
           ++  L  KV KA+   G +  N+  N  R A   + +H+H H++P+
Sbjct: 59  DILPLVKKVTKAI---GPENYNVLQNNGRIAHQFV-DHVHFHIIPK 100
>ref|NP_283602.1| (NC_003116) putative nucleotide-binding protein [Neisseria
           meningitidis Z2491]
 pir||F81925 probable nucleotide-binding protein NMA0806 [imported] - Neisseria
           meningitidis (group A strain Z2491)
 emb|CAB84089.1| (AL162754) putative nucleotide-binding protein [Neisseria
           meningitidis Z2491]
          Length = 107

 Score = 42.4 bits (98), Expect = 0.002
 Identities = 30/105 (28%), Positives = 51/105 (48%), Gaps = 5/105 (4%)

Query: 19  SCVFCEISQNPAKDSENRVLYRNSDLFVVMNAYPYNPGHLLIIPHVHQASVELLDLNTWL 78
           +C+FC+I+   AKD   + +Y + ++    +  P  P HLL+IP VH  S+         
Sbjct: 3   NCIFCKIA---AKDIPAQTVYEDGEMVCFKDINPAAPVHLLLIPKVHFDSLAHAAPEHQP 59

Query: 79  NMNALAPKVLKALYAYG-AQGINLGLNLHRNAGAGIPEHLHMHLV 122
            +  +  KV +   A G A G    +N  +  G  +  HLH+H++
Sbjct: 60  LLGKMMLKVPEIAKAAGLADGFKTLINTGKGGGQEV-FHLHIHIM 103
>ref|NP_394795.1| (NC_002578) cell-cycle regulation histidine triad (HIT) related
           protein [Thermoplasma acidophilum]
 emb|CAC12460.1| (AL445067) cell-cycle regulation histidine triad (HIT) related
           protein [Thermoplasma acidophilum]
          Length = 160

 Score = 42.4 bits (98), Expect = 0.002
 Identities = 27/106 (25%), Positives = 49/106 (45%), Gaps = 7/106 (6%)

Query: 20  CVFCEISQNPAKDSENRVLYRNSDLFVVMNAYPYNPGHLLIIPHVHQASVELLDLNTWLN 79
           C FC+I       + + ++Y + +    ++  P   GH L++P  H A +  +D  T   
Sbjct: 20  CKFCDIISGK---TASEIVYSDENFVAFLDYKPLFKGHTLLVPRKHFADIYAMDDLTLSK 76

Query: 80  MNALAPKVLKAL-YAYGAQGINLGLNLHRNAGAGIPEHLHMHLVPR 124
           M      +  A+  A G+ G  + +N        +P H+H+H+VPR
Sbjct: 77  MMKTVTIISMAVERATGSDGTFIAIN--NKVSQSVP-HVHVHIVPR 119
>ref|NP_654589.1| (NC_003995) HIT, HIT family [Bacillus anthracis A2012] [Bacillus
           anthracis str. A2012]
          Length = 144

 Score = 42.0 bits (97), Expect = 0.002
 Identities = 37/145 (25%), Positives = 65/145 (44%), Gaps = 16/145 (11%)

Query: 20  CVFCEISQNPAKDSENRVLYRNSDLFVVMNAYPYNPGHLLIIPHVHQASVELLD---LNT 76
           C+ C ++    K  +   +Y +  +   ++  P+  GH LI+P  H   V+ LD     +
Sbjct: 3   CLGCRLAGGEEKIYK---VYEDDYVTCFLDHEPFYTGHTLIVPKQHVVEVDELDDVVAKS 59

Query: 77  WLNMNALAPKVLKALYAYGAQGINLGLNLHRNAGA-GIPEHLHMHLVPRFLGDSNFMSVI 135
            ++ + L  K +K LY         G+ + +N G      H HMH+VPR+   S     +
Sbjct: 60  IMDASKLITKAIKLLYKPD------GVTVCQNGGIFNELTHYHMHVVPRYKERSFAEFYM 113

Query: 136 AQTRVCGMDLNETYLTLKNLLEKEL 160
            Q    G + N  +   KNLL++ +
Sbjct: 114 VQQ---GENKNYNFEETKNLLKEAI 135
>ref|NP_587836.1| (NC_003421) diadenosine tetraphosphatase [Schizosaccharomyces
           pombe]
 sp|P49776|APH1_SCHPO Bis(5'-nucleosyl)-tetraphosphatase (Asymmetrical) (Diadenosine
           5',5'''-P1,P4-tetraphosphate asymmetrical hydrolase)
           (Diadenosine tetraphosphatase) (AP4A hydrolase)
           (AP4AASE)
 pir||S64700 bis(5'-nucleosyl)-tetraphosphatase (asymmetrical) (EC 3.6.1.17) -
           fission yeast (Schizosaccharomyces pombe)
 pir||T41374 diadenosine tetraphosphatase - fission yeast (Schizosaccharomyces
           pombe)
 gb|AAC49143.1| (U32615) diadenosine 5',5'''-P1,P4-tetraphosphate asymmetrical
           hydrolase [Schizosaccharomyces pombe]
 emb|CAB09779.1| (Z97052) diadenosine tetraphosphatase [Schizosaccharomyces pombe]
          Length = 182

 Score = 41.6 bits (96), Expect = 0.003
 Identities = 26/95 (27%), Positives = 47/95 (49%), Gaps = 2/95 (2%)

Query: 35  NRVLYRNSDLFVVMNAYPYNPGHLLIIPHVHQASVELLDLNTWLNMNALAPKVLKAL-YA 93
           ++V YR       +N  P  PGH+L+IP      ++ L  +   ++     KV + +   
Sbjct: 14  SQVFYRTKLSAAFVNLKPILPGHVLVIPQRAVPRLKDLTPSELTDLFTSVRKVQQVIEKV 73

Query: 94  YGAQGINLGLNLHRNAGAGIPEHLHMHLVPRFLGD 128
           + A   N+G+    +AG  +P H+H+H++PR   D
Sbjct: 74  FSASASNIGIQDGVDAGQTVP-HVHVHIIPRKKAD 107
>emb|CAB95210.1| (AL359773) probable hypothetical hit-family protein [Leishmania
           major]
          Length = 142

 Score = 40.8 bits (94), Expect = 0.005
 Identities = 27/107 (25%), Positives = 50/107 (46%), Gaps = 5/107 (4%)

Query: 19  SCVFCEISQNPAKDSENRVLYRNSDLFVVMNAYPYNPGHLLIIPHVHQASVELLDLNTWL 78
           +C+FC+I +    D     +   S     M+  P + GH+L+IP  H + +  L +    
Sbjct: 4   NCIFCKIIKG---DIPCAKVAETSKALAFMDINPLSRGHMLVIPKEHASCLHELGMEDAA 60

Query: 79  NMNALAPKVLKALYA-YGAQGINLGLNLHRNAGAGIPEHLHMHLVPR 124
           ++  L  K  +A+    G+   N+  N    A   +P H+H H++P+
Sbjct: 61  DVGVLLAKASRAVAGPDGSMQYNVLQNNGSLAHQEVP-HVHFHIIPK 106
>sp|O07817|HITA_NEIGO HITA PROTEIN
 gb|AAB61288.1| (AF003550) HitA [Neisseria gonorrhoeae]
          Length = 107

 Score = 40.8 bits (94), Expect = 0.005
 Identities = 30/107 (28%), Positives = 50/107 (46%), Gaps = 9/107 (8%)

Query: 19  SCVFCEISQNPAKDSENRVLYRNSDLFVVMNAYPYNPGHLLIIPHVHQASVELLDLNTWL 78
           +C+FC+I+   AK+   + +Y + ++    +  P  P HLL+IP VH  S+         
Sbjct: 3   NCIFCKIA---AKEIPAQTVYEDGEMVCFKDINPAAPLHLLLIPKVHFDSLAHAAPE--- 56

Query: 79  NMNALAPKVLKALYAYGAQGINLGLNLHRNAGAGIPE---HLHMHLV 122
           +   L   +LK      A G+  G     N G G  +   HLH+H++
Sbjct: 57  HQPLLGKMMLKVPEIAKASGLTDGFKTLINTGKGGGQEVFHLHIHIM 103
>gb|AAL92398.1| (AC115611) FRAGILE HISTIDINE TRIAD PROTEIN [Dictyostelium
           discoideum]
          Length = 149

 Score = 40.4 bits (93), Expect = 0.007
 Identities = 25/96 (26%), Positives = 47/96 (48%), Gaps = 10/96 (10%)

Query: 34  ENRVLYRNSDLFVVMNAYPYNPGHLL-----IIPHVHQASVELLDLNTWLNMNALAPKVL 88
           ++ + +     F ++N  P  PGH+L     I+P V   + E    + WL+   ++  V 
Sbjct: 13  QSEIFFTTELSFALVNLKPVLPGHVLVCPKRIVPRVKDLTKEEFT-DLWLSAQRISSVVE 71

Query: 89  KALYAYGAQGINLGLNLHRNAGAGIPEHLHMHLVPR 124
           +    +   GI   +   +NAG  + EH+H+H++PR
Sbjct: 72  EH---FNGDGITFAIQDGKNAGQTV-EHVHIHIIPR 103
  Database: /home/scwang/download_20020708_db/nr
    Posted date:  Aug 7, 2002 12:55 PM
  Number of letters in database: 324,149,939
  Number of sequences in database:  1,026,957
  
Lambda     K      H
   0.321    0.138    0.421 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 107,101,858
Number of Sequences: 1026957
Number of extensions: 4126273
Number of successful extensions: 10317
Number of sequences better than 1.0e-02: 68
Number of HSP's better than  0.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 46
Number of HSP's that attempted gapping in prelim test: 10217
Number of HSP's gapped (non-prelim): 68
length of query: 161
length of database: 324,149,939
effective HSP length: 111
effective length of query: 50
effective length of database: 210,157,712
effective search space: 10507885600
effective search space used: 10507885600
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 92 (40.0 bits)