BLASTP 2.2.1 [Apr-13-2001]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|15645365|ref|NP_207539.1| hypothetical protein
[Helicobacter pylori 26695]
(419 letters)
Database: /home/scwang/download_20020708_db/nr
1,026,957 sequences; 324,149,939 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_207539.1| (NC_000915) hypothetical protein [Helicoba... 840 0.0
ref|NP_223401.1| (NC_000921) putative [Helicobacter pylori ... 807 0.0
ref|NP_282426.1| (NC_002163) putative fibronectin domain-co... 210 3e-53
ref|NP_465990.1| (NC_003210) similar to chitinase and chiti... 52 2e-05
ref|NP_471941.1| (NC_003212) similar to chitinase and chiti... 49 8e-05
ref|NP_523604.1| (NM_078880) Leukocyte-antigen-related-like... 49 1e-04
gb|AAF53837.2| (AE003663) Lar gene product [Drosophila mela... 49 1e-04
sp|P50899|GUXB_CELFI EXOGLUCANASE B PRECURSOR (EXOCELLOBIOH... 48 2e-04
ref|NP_656675.1| (NC_003995) fn3, Fibronectin type III doma... 48 2e-04
emb|CAA38068.1| (X54133) protein-tyrosine phosphatase [Homo... 47 5e-04
ref|NP_002830.1| (NM_002839) protein tyrosine phosphatase, ... 47 5e-04
ref|NP_569075.1| (NM_130391) protein tyrosine phosphatase, ... 47 5e-04
ref|NP_477289.1| (NM_057941) sdk-P1 [Drosophila melanogaste... 46 7e-04
ref|NP_569076.1| (NM_130392) protein tyrosine phosphatase, ... 46 7e-04
gb|AAF45541.1| (AE003418) sdk gene product [Drosophila mela... 46 7e-04
gb|AAD34783.1| (AF132195) unknown [Drosophila melanogaster] 46 7e-04
gb|AAF43605.1|AF197944_1 (AF197944) receptor protein tyrosi... 46 0.001
pir||T13924 sdk protein - fruit fly (Drosophila melanogaste... 45 0.002
pir||C54689 protein-tyrosine-phosphatase (EC 3.1.3.48), rec... 45 0.002
pir||S10789 amylase A-180 - alkaliphilic eubacterium 163-26... 45 0.002
ref|NP_241982.1| (NC_002570) BH1116~unknown conserved prote... 44 0.003
pir||D54689 protein-tyrosine-phosphatase (EC 3.1.3.48), rec... 44 0.004
gb|EAA06917.1| (AAAB01008847) ebiP1527 [Anopheles gambiae s... 44 0.005
ref|NP_062016.1| (NM_019143) fibronectin 1 [Rattus norvegic... 44 0.005
ref|XP_136516.1| (XM_136516) similar to Usher syndrome type... 44 0.005
ref|NP_477290.1| (NM_057942) sdk-P2 [Drosophila melanogaster] 44 0.005
pir||S20898 titin - human (fragments) 43 0.006
emb|CAA45940.1| (X64699) titin [Homo sapiens] 43 0.006
emb|CAD12455.1| (AJ277892) N2B-Titin Isoform [Homo sapiens] 43 0.006
ref|NP_597681.1| (NM_133437) titin, isoform novex-2; connec... 43 0.006
ref|NP_596869.1| (NM_133378) titin, isoform N2-A; connectin... 43 0.006
pir||I38344 titin, cardiac muscle [validated] - human 43 0.006
emb|CAA62188.1| (X90568) Protein sequence and annotation av... 43 0.006
ref|XP_038278.2| (XM_038278) similar to titin, isoform N2-A... 43 0.006
ref|NP_003310.2| (NM_003319) titin, isoform N2-B; connectin... 43 0.006
ref|NP_597676.1| (NM_133432) titin, isoform novex-1; connec... 43 0.006
emb|CAD12456.1| (AJ277892) Titin [Homo sapiens] 43 0.006
>ref|NP_207539.1| (NC_000915) hypothetical protein [Helicobacter pylori 26695]
pir||B64613 hypothetical protein HP0746 - Helicobacter pylori (strain 26695)
gb|AAD07801.1| (AE000587) H. pylori predicted coding region HP0746 [Helicobacter
pylori 26695]
Length = 419
Score = 840 bits (2171), Expect = 0.0
Identities = 419/419 (100%), Positives = 419/419 (100%)
Query: 1 MRSWMKKKYFTLLLQSSVVLAVFIGCSSTRNHTFSALNNQENIDTNLPVVHSIKTINDVS 60
MRSWMKKKYFTLLLQSSVVLAVFIGCSSTRNHTFSALNNQENIDTNLPVVHSIKTINDVS
Sbjct: 1 MRSWMKKKYFTLLLQSSVVLAVFIGCSSTRNHTFSALNNQENIDTNLPVVHSIKTINDVS 60
Query: 61 SVGFEWPKIADTYDIDGFILYRLKKDSKLKRIATIKNPYATHYYDEGLETESSYTYQLAT 120
SVGFEWPKIADTYDIDGFILYRLKKDSKLKRIATIKNPYATHYYDEGLETESSYTYQLAT
Sbjct: 61 SVGFEWPKIADTYDIDGFILYRLKKDSKLKRIATIKNPYATHYYDEGLETESSYTYQLAT 120
Query: 121 YKGDKISNLSDPILVKTSFINPVESVFASLEYPKSVKVFWSPHPNPSVSKYIIQRQNKDG 180
YKGDKISNLSDPILVKTSFINPVESVFASLEYPKSVKVFWSPHPNPSVSKYIIQRQNKDG
Sbjct: 121 YKGDKISNLSDPILVKTSFINPVESVFASLEYPKSVKVFWSPHPNPSVSKYIIQRQNKDG 180
Query: 181 KFLNVGAVRNRLFVEFFDKDLEDGKKYRYQVIAENFMGDKSRPSVIVEGKTKDLPKEITN 240
KFLNVGAVRNRLFVEFFDKDLEDGKKYRYQVIAENFMGDKSRPSVIVEGKTKDLPKEITN
Sbjct: 181 KFLNVGAVRNRLFVEFFDKDLEDGKKYRYQVIAENFMGDKSRPSVIVEGKTKDLPKEITN 240
Query: 241 VRVSQNLTRHIELSWDKSTQEDVIAYRIYASNNRNDKYKFIAQTTNTSYVDKIEKDNLTR 300
VRVSQNLTRHIELSWDKSTQEDVIAYRIYASNNRNDKYKFIAQTTNTSYVDKIEKDNLTR
Sbjct: 241 VRVSQNLTRHIELSWDKSTQEDVIAYRIYASNNRNDKYKFIAQTTNTSYVDKIEKDNLTR 300
Query: 301 YYKVVALDKTHLEGALPKEPAMGETADRPEAPIITKGTIQDSSALIQWENNPSAKIATYA 360
YYKVVALDKTHLEGALPKEPAMGETADRPEAPIITKGTIQDSSALIQWENNPSAKIATYA
Sbjct: 301 YYKVVALDKTHLEGALPKEPAMGETADRPEAPIITKGTIQDSSALIQWENNPSAKIATYA 360
Query: 361 VYRFEANSKTPLRFGNITKNQFVDKDMKVGVAYRYQVVSVDKDGLESHPSKEVRLFLER 419
VYRFEANSKTPLRFGNITKNQFVDKDMKVGVAYRYQVVSVDKDGLESHPSKEVRLFLER
Sbjct: 361 VYRFEANSKTPLRFGNITKNQFVDKDMKVGVAYRYQVVSVDKDGLESHPSKEVRLFLER 419
>ref|NP_223401.1| (NC_000921) putative [Helicobacter pylori J99]
pir||C71900 hypothetical protein jhp0683 - Helicobacter pylori (strain J99)
gb|AAD06271.1| (AE001500) putative [Helicobacter pylori J99]
Length = 419
Score = 807 bits (2084), Expect = 0.0
Identities = 399/419 (95%), Positives = 410/419 (97%)
Query: 1 MRSWMKKKYFTLLLQSSVVLAVFIGCSSTRNHTFSALNNQENIDTNLPVVHSIKTINDVS 60
MRSWMKKKYFTLLLQSSVVLAVFIGCSSTRNHTFSAL+NQEN D LPVVHSIKTINDVS
Sbjct: 1 MRSWMKKKYFTLLLQSSVVLAVFIGCSSTRNHTFSALSNQENTDDKLPVVHSIKTINDVS 60
Query: 61 SVGFEWPKIADTYDIDGFILYRLKKDSKLKRIATIKNPYATHYYDEGLETESSYTYQLAT 120
SVGFEW K+ADTYDIDGF+LYRLKKDSKLKRIATIKNPYATHYYDEGLETESSYTYQLAT
Sbjct: 61 SVGFEWSKVADTYDIDGFVLYRLKKDSKLKRIATIKNPYATHYYDEGLETESSYTYQLAT 120
Query: 121 YKGDKISNLSDPILVKTSFINPVESVFASLEYPKSVKVFWSPHPNPSVSKYIIQRQNKDG 180
YKGDKIS LS+PILVKTSFINPVESVFASLEYPKSVKVFWSPHPNPSVSKYIIQRQNKDG
Sbjct: 121 YKGDKISKLSEPILVKTSFINPVESVFASLEYPKSVKVFWSPHPNPSVSKYIIQRQNKDG 180
Query: 181 KFLNVGAVRNRLFVEFFDKDLEDGKKYRYQVIAENFMGDKSRPSVIVEGKTKDLPKEITN 240
KFLNVGAV+NRLFVEFFDKDLEDG+KYRYQ+IAENFMGDKSRPSVIVEGKTKDLPKEI N
Sbjct: 181 KFLNVGAVKNRLFVEFFDKDLEDGQKYRYQIIAENFMGDKSRPSVIVEGKTKDLPKEIAN 240
Query: 241 VRVSQNLTRHIELSWDKSTQEDVIAYRIYASNNRNDKYKFIAQTTNTSYVDKIEKDNLTR 300
VRVSQNLTR IELSWDKS +EDVIAYRIYASNNRNDKYKFIAQTTNTSYVDKIEKDNLTR
Sbjct: 241 VRVSQNLTRQIELSWDKSPEEDVIAYRIYASNNRNDKYKFIAQTTNTSYVDKIEKDNLTR 300
Query: 301 YYKVVALDKTHLEGALPKEPAMGETADRPEAPIITKGTIQDSSALIQWENNPSAKIATYA 360
YYKVVA+DKTHLEGALPKEPAMGET+DRPEAPIITKGTIQDSSALIQWENNPS KIATYA
Sbjct: 301 YYKVVAVDKTHLEGALPKEPAMGETSDRPEAPIITKGTIQDSSALIQWENNPSPKIATYA 360
Query: 361 VYRFEANSKTPLRFGNITKNQFVDKDMKVGVAYRYQVVSVDKDGLESHPSKEVRLFLER 419
VYRFEANSKTPLRFGNIT+NQFVDKDMKVGVAYRYQVVSVDKDGLESHPSKEVRLFLER
Sbjct: 361 VYRFEANSKTPLRFGNITQNQFVDKDMKVGVAYRYQVVSVDKDGLESHPSKEVRLFLER 419
>ref|NP_282426.1| (NC_002163) putative fibronectin domain-containing lipoprotein
[Campylobacter jejuni]
pir||A81336 probable fibronectin domain-containing lipoprotein Cj1279c
[imported] - Campylobacter jejuni (strain NCTC 11168)
emb|CAB73533.1| (AL139077) putative fibronectin domain-containing lipoprotein
[Campylobacter jejuni]
Length = 411
Score = 210 bits (534), Expect = 3e-53
Identities = 128/411 (31%), Positives = 213/411 (51%), Gaps = 9/411 (2%)
Query: 8 KYFTLLLQSSVVLAVFIGCSSTRNHTFSALNNQENIDTNLPVVHSIKTINDVSSVGFEWP 67
K F L S + + CS ++ ++ ++ + + ++ +LP V S+K+++D+S++ FEW
Sbjct: 3 KRFRLSFYLSFLTLLLSACSVSQMNSLAS-SKEPAVNESLPKVESLKSLSDMSNIAFEWE 61
Query: 68 KIADTYDIDGFILYRLKKDSK-LKRIATIKNPYATHYYDEGLETESSYTYQLATYKGD-K 125
+ + +I GF LYR ++ K + TIK+ + THY D LE + Y Y + ++ +
Sbjct: 62 PLYNE-NIKGFYLYRSSDENPDFKLVGTIKDKFQTHYVDTKLEPGTKYRYMMKSFNEQGQ 120
Query: 126 ISNLSDPILVKTS-FINPVESVFASLEYPKSVKVFWSPHPNPSVSKYIIQRQNKDGK-FL 183
IS I V T+ + V V A P +K+ W PHP+ V YII+R D K F
Sbjct: 121 ISEDGKVIEVSTAPRLEAVPFVQAVTNLPNRIKLIWRPHPDFRVDSYIIERTKGDDKEFK 180
Query: 184 NVGAVRNRLFVEFFDKDLEDGKKYRYQVIAENFMGDKSRPSVIVEGKTKDLPKEITNVRV 243
+ V+NRL E+ D DL+ + Y++IA +F G KS S +V +K LP ++ ++
Sbjct: 181 KIAEVKNRLNAEYIDSDLKPNENSSYRIIAVSFNGIKSGSSQVVSSTSKALPPQVEHLSA 240
Query: 244 SQNLTRHIELSWDKSTQEDVIAYRIYASNNRNDKYKFIAQTTNTSYVDKIEKDNLTRYYK 303
S + + I L+WD T ED Y++Y++++ + +A+T SY D +E ++YYK
Sbjct: 241 STDGSSKIILTWDAPTYEDFSYYKVYSTSSSFLPFSVLAKTDKNSYEDIVEGAGKSKYYK 300
Query: 304 VVALDKTHLEGALPKEPAMGETADRPEAPIITKGTIQDSSALIQWENNPSAKIATYAVYR 363
V +DK LE +PK+ G+T P AP I ++W +N + Y V R
Sbjct: 301 VTMVDKDGLESPMPKDGVEGKTLGNPLAPSIILAQSTSEGINLEWSDN-DTRAVEYEVRR 359
Query: 364 FEANSKTPLRFGNITKNQFVDKDMKVGVAYRYQVVSVDKDGLESHPSKEVR 414
+ F I + + D GV Y Y+V+++D GL S PS +V+
Sbjct: 360 YGGEQNAV--FKGIKEKRLKDVKALPGVEYSYEVIAIDSAGLRSEPSSKVK 408
>ref|NP_465990.1| (NC_003210) similar to chitinase and chitin binding protein
[Listeria monocytogenes EGD-e]
emb|CAD00545.1| (AL591983) similar to chitinase and chitin binding protein
[Listeria monocytogenes]
Length = 478
Score = 51.6 bits (122), Expect = 2e-05
Identities = 52/216 (24%), Positives = 83/216 (38%), Gaps = 27/216 (12%)
Query: 209 YQVIAENFMGDKSRPSVIVEGKTKDLPKEITNVRVSQNLTRHIELSWDKSTQE-DVIAYR 267
YQVI N + P E TK TN+ + T+ + L+W+ ST + Y
Sbjct: 184 YQVIDANIINSDITPVADTEAPTKP-----TNLAATTT-TKTVSLAWNASTDNVGIKGYE 237
Query: 268 IYASNNRNDKYKFIAQTTNTSYVDKIEKDNLTRYYKVVALD----KTHLEGAL----PKE 319
I I ++ SY D + N Y V A D K+ L ++ +
Sbjct: 238 ILRDG------VVIGESQTASYEDTTVESNTAYTYTVRAKDFAGNKSTLSNSINVTTKEV 291
Query: 320 PAMGETADRPEAPIITKGTIQDSSALIQWENNPSAKIATYAVYRFEANSKTPLRFGNITK 379
PA+ A +++ G + AL + + ++ Y +YR T TK
Sbjct: 292 PAVDNEAPTAPKSLMSHGQTDTTIALCWQASTDNVEVKNYEIYRNNTKIATS------TK 345
Query: 380 NQFVDKDMKVGVAYRYQVVSVDKDGLESHPSKEVRL 415
F D + +Y Y+V +VD G S S E+ +
Sbjct: 346 TMFEDTKLASNTSYNYKVYAVDTSGNRSLVSNEITI 381
Score = 45.1 bits (105), Expect = 0.002
Identities = 37/119 (31%), Positives = 54/119 (45%), Gaps = 14/119 (11%)
Query: 198 DKDLEDGKKYRYQVIAENFMGDKSRPSVIVEGKTKDLPKEITNVRVS-QNLTRH------ 250
D +E Y Y V A++F G+KS S + TK++P + ++L H
Sbjct: 255 DTTVESNTAYTYTVRAKDFAGNKSTLSNSINVTTKEVPAVDNEAPTAPKSLMSHGQTDTT 314
Query: 251 IELSWDKSTQE-DVIAYRIYASNNRNDKYKFIAQTTNTSYVDKIEKDNLTRYYKVVALD 308
I L W ST +V Y IY +N + IA +T T + D N + YKV A+D
Sbjct: 315 IALCWQASTDNVEVKNYEIYRNNTK------IATSTKTMFEDTKLASNTSYNYKVYAVD 367
>ref|NP_471941.1| (NC_003212) similar to chitinase and chitin binding protein
[Listeria innocua]
emb|CAC97838.1| (AL596173) similar to chitinase and chitin binding protein
[Listeria innocua]
Length = 478
Score = 49.3 bits (116), Expect = 8e-05
Identities = 53/215 (24%), Positives = 83/215 (37%), Gaps = 29/215 (13%)
Query: 209 YQVIAENFMGDKSRPSVIVEGKTKDLPKEITNVRVSQNLTRHIELSWDKSTQE-DVIAYR 267
YQVI N + P + + P E TN+ + + L+W S + Y
Sbjct: 184 YQVIDANIINSDIEPVL-----DNEAPTEPTNL-TGTTTAKKVSLTWTASKDNVGIKGYE 237
Query: 268 IYASNNRNDKYKFIAQTTNTSYVDKIEKDNLTRYYKVVALDKTHLEGALPKEPAMGETAD 327
I K I ++ +Y D KDN T Y V A D + +L + T +
Sbjct: 238 ILRDG------KVIGESQVAAYEDTTVKDNTTYTYTVRAKDFSGNTSSLSNSAKL-TTKE 290
Query: 328 RP----EAPIITKGTIQ----DSSALIQWE-NNPSAKIATYAVYRFEANSKTPLRFGNIT 378
P EAP KG + D++ + W+ + + ++ Y +YR T T
Sbjct: 291 APAVDNEAPTAPKGLMSHAQTDTTIALCWQASTDNVEVKNYELYRNNTKIATT------T 344
Query: 379 KNQFVDKDMKVGVAYRYQVVSVDKDGLESHPSKEV 413
F D + +Y Y+V +VD G S S E+
Sbjct: 345 STMFEDTKLASDTSYSYKVYAVDTSGNRSLVSNEI 379
Score = 44.3 bits (103), Expect = 0.003
Identities = 64/250 (25%), Positives = 102/250 (40%), Gaps = 37/250 (14%)
Query: 72 TYDIDGFILYRLKKDSKLKRIATIKNPYATHYYDEGL----ETESSYTYQLATYKGDKIS 127
T DG + RL K TI N + +Y G+ +T +++ YQ+ + I+
Sbjct: 142 TITADGSVPDRLSKQE-----ITIPNDRSGYYVILGVWSIADTGNAF-YQVID--ANIIN 193
Query: 128 NLSDPILVKTSFINPVESVFASLEYPKSVKVFWSPHP-NPSVSKYIIQRQNKDGKFLNVG 186
+ +P+L + P K V + W+ N + Y I R DGK +
Sbjct: 194 SDIEPVLDNEAPTEPTN--LTGTTTAKKVSLTWTASKDNVGIKGYEILR---DGKVIGES 248
Query: 187 AVRNRLFVEFFDKDLEDGKKYRYQVIAENFMGDKSRPSVIVEGKTKDLPKEITNVRVS-Q 245
V + D ++D Y Y V A++F G+ S S + TK+ P + +
Sbjct: 249 QV-----AAYEDTTVKDNTTYTYTVRAKDFSGNTSSLSNSAKLTTKEAPAVDNEAPTAPK 303
Query: 246 NLTRH------IELSWDKSTQE-DVIAYRIYASNNRNDKYKFIAQTTNTSYVDKIEKDNL 298
L H I L W ST +V Y +Y +N + IA TT+T + D +
Sbjct: 304 GLMSHAQTDTTIALCWQASTDNVEVKNYELYRNNTK------IATTTSTMFEDTKLASDT 357
Query: 299 TRYYKVVALD 308
+ YKV A+D
Sbjct: 358 SYSYKVYAVD 367
>ref|NP_523604.1| (NM_078880) Leukocyte-antigen-related-like [Drosophila
melanogaster]
sp|P16621|LAR_DROME Protein-tyrosine phosphatase Lar precursor
(Protein-tyrosine-phosphate phosphohydrolase) (DLAR)
pir||TDFFLK protein-tyrosine-phosphatase (EC 3.1.3.48) DLAR precursor - fruit
fly (Drosophila melanogaster)
gb|AAA28668.1| (M27700) protein tyrosine phosphatase (DLAR) precursor [Drosophila
melanogaster]
gb|AAC47002.1| (U36857) protein tyrosine phosphatase DLAR [Drosophila
melanogaster]
Length = 2029
Score = 48.5 bits (114), Expect = 1e-04
Identities = 44/169 (26%), Positives = 71/169 (41%), Gaps = 12/169 (7%)
Query: 209 YQVIAENFMGDKSRPSVIVEGKTKDLPKEITNVRVSQNLTRHIELSWDKSTQEDVIAYRI 268
Y IA + +G SV+ K + LP T+V++S+ + L W ED+ Y I
Sbjct: 299 YTCIAASTLGQIDSVSVV---KVQSLPTAPTDVQISEVTATSVRLEWSYKGPEDLQYYVI 355
Query: 269 -YASNNRNDKYKFIAQTTNTSYVDKIEKDNLTRYYKVVALDKTHLEGALPKEPA---MGE 324
Y N N + I+ YV + + V+A++ ++ P PA GE
Sbjct: 356 QYKPKNANQAFSEISGIITMYYVVRALSPYTEYEFYVIAVN--NIGRGPPSAPATCTTGE 413
Query: 325 TADRPEAPIITKGTIQDSSALIQWE--NNPSAKIATYAVYRFEANSKTP 371
T + T+ S+ +I WE P+ ++ Y VY + NS P
Sbjct: 414 TKMESAPRNVQVRTLSSSTMVITWEPPETPNGQVTGYKVY-YTTNSNQP 461
>gb|AAF53837.2| (AE003663) Lar gene product [Drosophila melanogaster]
Length = 2037
Score = 48.5 bits (114), Expect = 1e-04
Identities = 44/169 (26%), Positives = 71/169 (41%), Gaps = 12/169 (7%)
Query: 209 YQVIAENFMGDKSRPSVIVEGKTKDLPKEITNVRVSQNLTRHIELSWDKSTQEDVIAYRI 268
Y IA + +G SV+ K + LP T+V++S+ + L W ED+ Y I
Sbjct: 307 YTCIAASTLGQIDSVSVV---KVQSLPTAPTDVQISEVTATSVRLEWSYKGPEDLQYYVI 363
Query: 269 -YASNNRNDKYKFIAQTTNTSYVDKIEKDNLTRYYKVVALDKTHLEGALPKEPA---MGE 324
Y N N + I+ YV + + V+A++ ++ P PA GE
Sbjct: 364 QYKPKNANQAFSEISGIITMYYVVRALSPYTEYEFYVIAVN--NIGRGPPSAPATCTTGE 421
Query: 325 TADRPEAPIITKGTIQDSSALIQWE--NNPSAKIATYAVYRFEANSKTP 371
T + T+ S+ +I WE P+ ++ Y VY + NS P
Sbjct: 422 TEMESAPRNVQVRTLSSSTMVITWEPPETPNGQVTGYKVY-YTTNSNQP 469
>sp|P50899|GUXB_CELFI EXOGLUCANASE B PRECURSOR (EXOCELLOBIOHYDROLASE B)
(1,4-BETA-CELLOBIOHYDROLASE B) (CBP120)
pir||S59077 cellulose 1,4-beta-cellobiosidase (EC 3.2.1.91) precursor -
Cellulomonas fimi
gb|AAB00822.1| (L38827) beta-1,4-cellobiohydrolase [Cellulomonas fimi]
Length = 1090
Score = 47.8 bits (112), Expect = 2e-04
Identities = 53/228 (23%), Positives = 80/228 (34%), Gaps = 31/228 (13%)
Query: 196 FFDKDLEDGKKYRYQVIAENFMGDKSRPSVIVEGKTKDLPKEITNVRV-----SQNLTRH 250
F D L Y Y V A + G+ S PS + TK P + T V S +
Sbjct: 753 FTDTGLTASTAYAYTVRAFDAAGNVSAPSAALTVTTKATPSDTTAPSVPAITSSSSTANS 812
Query: 251 IELSWDKSTQ----EDVIAYRIYASNNRNDKYKFIAQTTNTSYVDKIEKDNLTRYYKVVA 306
+ + W ST + Y +Y R +AQTT ++ D + Y V A
Sbjct: 813 VTIGWSASTDNAGGSGLAGYDVYRGATR------VAQTTALTFTDTGLTASTAYEYTVRA 866
Query: 307 LD---KTHLEGALPKEPAMGETADRPEAPIITKG----TIQDSSALIQWE---NNPSAKI 356
D +T AP + G T+ ++S + W + + +
Sbjct: 867 RDVAGNVSAPSTAVSVTTKSDTTPDTTAPSVPAGLAAMTVTETSVALTWNASTDTGGSGL 926
Query: 357 ATYAVYRFEANSKTPLRFGNITKNQFVDKDMKVGVAYRYQVVSVDKDG 404
Y VYR R G+ T + D + AY+Y V + D G
Sbjct: 927 KGYDVYR------GATRVGSTTTASYTDTGLTAATAYQYTVRATDNAG 968
>ref|NP_656675.1| (NC_003995) fn3, Fibronectin type III domain [Bacillus anthracis
A2012] [Bacillus anthracis str. A2012]
Length = 455
Score = 47.8 bits (112), Expect = 2e-04
Identities = 62/236 (26%), Positives = 96/236 (40%), Gaps = 30/236 (12%)
Query: 183 LNVGAVRNRLFVEFFDKDLEDGKKYRYQVIAENFMGDKSRPSVIVEGKTKDLPKEITNVR 242
+NV R+ V D+ D Y VI + D V + + +P I +
Sbjct: 176 INVPTDRSGYHVILAVWDVADTANAFYNVIDVTLIND-----VKPDTEAPSIPNGIQAQK 230
Query: 243 VSQNLTRHIELSWDKSTQE-DVIAYRIYASNNRNDKYKFIAQTTNTSYVDKIEKDNLTRY 301
V+ N IEL+W ST V Y+I+ + + I T ++DK + +
Sbjct: 231 VTAN---SIELAWTASTDNVGVKGYQIFRNG------EMIDTVPGTHFIDKKLQPSTEYS 281
Query: 302 YKVVALDKTHLEGALPKEPA---MGETADRP--EAPIITKGT----IQDSSALIQWE-NN 351
Y V A+D G KE A + T + P EAP KG SS + W ++
Sbjct: 282 YTVKAIDAA---GNASKESAKLTVKTTVEAPDTEAPTQPKGLHSMGTTTSSVDLMWSPSD 338
Query: 352 PSAKIATYAVYRFEANSKTPLRFGNITKNQFVDKDMKVGVAYRYQVVSVDKDGLES 407
+ + Y +YR S + N T ++DK++ Y+Y V +VD G ES
Sbjct: 339 DNIGVGHYDIYRETEGSMKKIATSNTTS--YMDKNLLPNTTYKYVVKAVDVAGNES 392
>emb|CAA38068.1| (X54133) protein-tyrosine phosphatase [Homo sapiens]
Length = 1523
Score = 46.6 bits (109), Expect = 5e-04
Identities = 73/352 (20%), Positives = 129/352 (35%), Gaps = 43/352 (12%)
Query: 101 THYYDEGLETESSYTYQLATYKGDKISNLSDPILVKTSFINPV---ESVFASLEYPKSVK 157
T Y +GL+ S Y ++LA + + I +T P + + + S+
Sbjct: 179 TSYRLQGLKPNSLYYFRLAARSPQGLGASTAEISARTMQSKPSAPPQDISCTSPSSTSIL 238
Query: 158 VFWSPHP----NPSVSKYIIQRQNKDGK------FLNVGAVRNRLFVEFFDKDLEDGKKY 207
V W P P N +++Y I+ DG+ L + + + +E LE +Y
Sbjct: 239 VSWQPPPVEKQNGIITEYSIKYTAVDGEDDKPHEILGIPSDTTKYLLE----QLEKWTEY 294
Query: 208 RYQVIAENFMGDKSRPSVIVEGKTKDLPK-EITNVRVSQNLTRHIELSWDKSTQE----D 262
R V A +G ++ +D+P V V + +++SW
Sbjct: 295 RITVTAHTDVGPGPESLSVLIRTNEDVPSGPPRKVEVEAVNSTSVKVSWRSPVPNKQHGQ 354
Query: 263 VIAYRIYASNNRNDKYK-------FIAQTTNTSYVDKIEKDNL-------TRYYKVVALD 308
+ Y+++ N + K + + D E D + T Y V
Sbjct: 355 IRGYQVHYVRMENGEPKGQPMLKDVMLADAQWEFDDTTEHDMIISGLQPETSYSLTVTAY 414
Query: 309 KTHLEGALPKEPAMGETADRPEAPIITKGTIQDSSALIQWENNPSAKIATYAVYRFEANS 368
T +GA K + T P P + Q ++ALIQW + P YR +
Sbjct: 415 TTKGDGARSKPKLVSTTGAVPGKPRLVINHTQMNTALIQW-HPPVDTFGPLQGYRLKFGR 473
Query: 369 K-----TPLRFGNITKNQFVDKDMKVGVAYRYQVVSVDKDGLESHPSKEVRL 415
K T L F ++ F D+ G +Y +++ + +K G KE+ +
Sbjct: 474 KDMEPLTTLEFSE-KEDHFTATDIHKGASYVFRLSARNKVGFGEEMVKEISI 524
>ref|NP_002830.1| (NM_002839) protein tyrosine phosphatase, receptor type, D, isoform
1 precursor; protein tyrosine phosphatase, receptor
type, delta polypeptide; protein tyrosine phosphatase
delta [Homo sapiens]
sp|P23468|PTPD_HUMAN Protein-tyrosine phosphatase delta precursor (R-PTP-delta)
pir||A56178 protein-tyrosine-phosphatase (EC 3.1.3.48), receptor type delta
precursor - human
gb|AAC41749.1| (L38929) protein tyrosine phosphatase delta [Homo sapiens]
Length = 1912
Score = 46.6 bits (109), Expect = 5e-04
Identities = 73/352 (20%), Positives = 129/352 (35%), Gaps = 43/352 (12%)
Query: 101 THYYDEGLETESSYTYQLATYKGDKISNLSDPILVKTSFINPV---ESVFASLEYPKSVK 157
T Y +GL+ S Y ++LA + + I +T P + + + S+
Sbjct: 568 TSYRLQGLKPNSLYYFRLAARSPQGLGASTAEISARTMQSKPSAPPQDISCTSPSSTSIL 627
Query: 158 VFWSPHP----NPSVSKYIIQRQNKDGK------FLNVGAVRNRLFVEFFDKDLEDGKKY 207
V W P P N +++Y I+ DG+ L + + + +E LE +Y
Sbjct: 628 VSWQPPPVEKQNGIITEYSIKYTAVDGEDDKPHEILGIPSDTTKYLLE----QLEKWTEY 683
Query: 208 RYQVIAENFMGDKSRPSVIVEGKTKDLPK-EITNVRVSQNLTRHIELSWDKSTQE----D 262
R V A +G ++ +D+P V V + +++SW
Sbjct: 684 RITVTAHTDVGPGPESLSVLIRTNEDVPSGPPRKVEVEAVNSTSVKVSWRSPVPNKQHGQ 743
Query: 263 VIAYRIYASNNRNDKYK-------FIAQTTNTSYVDKIEKDNL-------TRYYKVVALD 308
+ Y+++ N + K + + D E D + T Y V
Sbjct: 744 IRGYQVHYVRMENGEPKGQPMLKDVMLADAQWEFDDTTEHDMIISGLQPETSYSLTVTAY 803
Query: 309 KTHLEGALPKEPAMGETADRPEAPIITKGTIQDSSALIQWENNPSAKIATYAVYRFEANS 368
T +GA K + T P P + Q ++ALIQW + P YR +
Sbjct: 804 TTKGDGARSKPKLVSTTGAVPGKPRLVINHTQMNTALIQW-HPPVDTFGPLQGYRLKFGR 862
Query: 369 K-----TPLRFGNITKNQFVDKDMKVGVAYRYQVVSVDKDGLESHPSKEVRL 415
K T L F ++ F D+ G +Y +++ + +K G KE+ +
Sbjct: 863 KDMEPLTTLEFSE-KEDHFTATDIHKGASYVFRLSARNKVGFGEEMVKEISI 913
Score = 44.7 bits (104), Expect = 0.002
Identities = 65/311 (20%), Positives = 116/311 (36%), Gaps = 11/311 (3%)
Query: 53 IKTINDVSSVGFEWPKIADTYDIDGFILYRLKKDSKLKRIATIKNPYATHYYDEGLETES 112
+ T + +S+ W + + +I+ K+S+ + I T Y GL S
Sbjct: 330 VVTESTATSITLTWDS-GNPEPVSYYIIQHKPKNSE-ELYKEIDGVATTRYSVAGLSPYS 387
Query: 113 SYTYQLATYKGDKISNLSDPILVKTSFINPVES---VFASLEYPKSVKVFWSP--HPNPS 167
Y +++ S+P+L +TS P + V A + ++ V W PN
Sbjct: 388 DYEFRVVAVNNIGRGPPSEPVLTQTSEQAPSSAPRDVQARMLSSTTILVQWKEPEEPNGQ 447
Query: 168 VSKYIIQRQNKDGKFLNVGAVRNRLFVEFFD-KDLEDGKKYRYQVIAENFMGDKSRPSVI 226
+ Y + + +N N + +L K Y +V+A +GD S I
Sbjct: 448 IQGYRVYYTMDPTQHVNNWMKHNVADSQITTIGNLVPQKTYSVKVLAFTSIGDGPLSSDI 507
Query: 227 VEGKTKDLPKEITNVRVSQNLTRHIELSWDKSTQEDVIAYRIYASNNRNDKYKFIAQTTN 286
+P + N + I LSW + + Y + + + + + I
Sbjct: 508 QVITQTGVPGQPLNFKAEPESETSILLSWTPPRSDTIANYELVYKDGEHGEEQRITIEPG 567
Query: 287 TSYVDKIEKDNLTRYYKVVALDKTHLEGALPKEPAMGETADRPEAP--IITKGTIQDSSA 344
TSY + K N Y+++ A L GA E + +P AP I+ + +S
Sbjct: 568 TSYRLQGLKPNSLYYFRLAARSPQGL-GASTAEISARTMQSKPSAPPQDISCTSPSSTSI 626
Query: 345 LIQWENNPSAK 355
L+ W+ P K
Sbjct: 627 LVSWQPPPVEK 637
>ref|NP_569075.1| (NM_130391) protein tyrosine phosphatase, receptor type, D, isoform
2 precursor; protein tyrosine phosphatase, receptor
type, delta polypeptide; protein tyrosine phosphatase
delta [Homo sapiens]
Length = 1899
Score = 46.6 bits (109), Expect = 5e-04
Identities = 73/352 (20%), Positives = 129/352 (35%), Gaps = 43/352 (12%)
Query: 101 THYYDEGLETESSYTYQLATYKGDKISNLSDPILVKTSFINPV---ESVFASLEYPKSVK 157
T Y +GL+ S Y ++LA + + I +T P + + + S+
Sbjct: 555 TSYRLQGLKPNSLYYFRLAARSPQGLGASTAEISARTMQSKPSAPPQDISCTSPSSTSIL 614
Query: 158 VFWSPHP----NPSVSKYIIQRQNKDGK------FLNVGAVRNRLFVEFFDKDLEDGKKY 207
V W P P N +++Y I+ DG+ L + + + +E LE +Y
Sbjct: 615 VSWQPPPVEKQNGIITEYSIKYTAVDGEDDKPHEILGIPSDTTKYLLE----QLEKWTEY 670
Query: 208 RYQVIAENFMGDKSRPSVIVEGKTKDLPK-EITNVRVSQNLTRHIELSWDKSTQE----D 262
R V A +G ++ +D+P V V + +++SW
Sbjct: 671 RITVTAHTDVGPGPESLSVLIRTNEDVPSGPPRKVEVEAVNSTSVKVSWRSPVPNKQHGQ 730
Query: 263 VIAYRIYASNNRNDKYK-------FIAQTTNTSYVDKIEKDNL-------TRYYKVVALD 308
+ Y+++ N + K + + D E D + T Y V
Sbjct: 731 IRGYQVHYVRMENGEPKGQPMLKDVMLADAQWEFDDTTEHDMIISGLQPETSYSLTVTAY 790
Query: 309 KTHLEGALPKEPAMGETADRPEAPIITKGTIQDSSALIQWENNPSAKIATYAVYRFEANS 368
T +GA K + T P P + Q ++ALIQW + P YR +
Sbjct: 791 TTKGDGARSKPKLVSTTGAVPGKPRLVINHTQMNTALIQW-HPPVDTFGPLQGYRLKFGR 849
Query: 369 K-----TPLRFGNITKNQFVDKDMKVGVAYRYQVVSVDKDGLESHPSKEVRL 415
K T L F ++ F D+ G +Y +++ + +K G KE+ +
Sbjct: 850 KDMEPLTTLEFSE-KEDHFTATDIHKGASYVFRLSARNKVGFGEEMVKEISI 900
Score = 44.7 bits (104), Expect = 0.002
Identities = 65/311 (20%), Positives = 116/311 (36%), Gaps = 11/311 (3%)
Query: 53 IKTINDVSSVGFEWPKIADTYDIDGFILYRLKKDSKLKRIATIKNPYATHYYDEGLETES 112
+ T + +S+ W + + +I+ K+S+ + I T Y GL S
Sbjct: 317 VVTESTATSITLTWDS-GNPEPVSYYIIQHKPKNSE-ELYKEIDGVATTRYSVAGLSPYS 374
Query: 113 SYTYQLATYKGDKISNLSDPILVKTSFINPVES---VFASLEYPKSVKVFWSP--HPNPS 167
Y +++ S+P+L +TS P + V A + ++ V W PN
Sbjct: 375 DYEFRVVAVNNIGRGPPSEPVLTQTSEQAPSSAPRDVQARMLSSTTILVQWKEPEEPNGQ 434
Query: 168 VSKYIIQRQNKDGKFLNVGAVRNRLFVEFFD-KDLEDGKKYRYQVIAENFMGDKSRPSVI 226
+ Y + + +N N + +L K Y +V+A +GD S I
Sbjct: 435 IQGYRVYYTMDPTQHVNNWMKHNVADSQITTIGNLVPQKTYSVKVLAFTSIGDGPLSSDI 494
Query: 227 VEGKTKDLPKEITNVRVSQNLTRHIELSWDKSTQEDVIAYRIYASNNRNDKYKFIAQTTN 286
+P + N + I LSW + + Y + + + + + I
Sbjct: 495 QVITQTGVPGQPLNFKAEPESETSILLSWTPPRSDTIANYELVYKDGEHGEEQRITIEPG 554
Query: 287 TSYVDKIEKDNLTRYYKVVALDKTHLEGALPKEPAMGETADRPEAP--IITKGTIQDSSA 344
TSY + K N Y+++ A L GA E + +P AP I+ + +S
Sbjct: 555 TSYRLQGLKPNSLYYFRLAARSPQGL-GASTAEISARTMQSKPSAPPQDISCTSPSSTSI 613
Query: 345 LIQWENNPSAK 355
L+ W+ P K
Sbjct: 614 LVSWQPPPVEK 624
>ref|NP_477289.1| (NM_057941) sdk-P1 [Drosophila melanogaster]
ref|NP_599141.1| (NM_134314) sdk-P1 [Drosophila melanogaster]
ref|NP_599142.1| (NM_134315) sdk-P1 [Drosophila melanogaster]
emb|CAB65848.1| (AL132792) the EST embl|AI239119|AI239119 comes from the 3' UTR
[Drosophila melanogaster]
Length = 2224
Score = 46.2 bits (108), Expect = 7e-04
Identities = 55/226 (24%), Positives = 98/226 (43%), Gaps = 24/226 (10%)
Query: 196 FFDKDLEDGKKYRYQVIAENFMGDKSRPSVIVEGKTKDLPKEITNVRVSQNLTRHIELSW 255
F DK E YR Q++A N GD R + I +P ++R S + +E++W
Sbjct: 1752 FLDKFTE----YRIQLLAFNPAGDGPRSAPITVKTLPGVPSAPLHLRFSDITMQSLEVTW 1807
Query: 256 D--KSTQEDVIAYRI-YASNNRNDKY-KFIAQ-TTNTSYVDKIEKDNLTRYYKVVALDKT 310
D K +++ Y + Y + N+K+ K + Q +NT+ + ++ +T + V A
Sbjct: 1808 DPPKFLNGEILGYLVTYETTEENEKFSKQVKQKVSNTTLRVQNLEEEVTYTFTVRAQTSV 1867
Query: 311 HLEGALPKEPAMGETADRPEAP---IITKGTIQDSSALIQWENNPSAKIATYAVYRFEAN 367
+ + G P AP I+TK SS + W N PS + Y EA
Sbjct: 1868 DYGPGISENVTTGPQDGSPVAPRDLILTKTL---SSVEMHWINGPSGR-GPILGYLIEAK 1923
Query: 368 SKTPLRFGNITK-NQFVDKDMKV-------GVAYRYQVVSVDKDGL 405
+ R+ I + + + +D V AY ++V++ ++ G+
Sbjct: 1924 KRDDSRWTKIEQTRKGMMQDFTVSYHILMPSTAYTFRVIAYNRYGI 1969
>ref|NP_569076.1| (NM_130392) protein tyrosine phosphatase, receptor type, D, isoform
3 precursor; protein tyrosine phosphatase, receptor
type, delta polypeptide; protein tyrosine phosphatase
delta [Homo sapiens]
Length = 1903
Score = 46.2 bits (108), Expect = 7e-04
Identities = 71/343 (20%), Positives = 126/343 (36%), Gaps = 34/343 (9%)
Query: 101 THYYDEGLETESSYTYQLATYKGDKISNLSDPILVKTSFINPV---ESVFASLEYPKSVK 157
T Y +GL+ S Y ++LA + + I +T P + + + S+
Sbjct: 568 TSYRLQGLKPNSLYYFRLAARSPQGLGASTAEISARTMQSKPSAPPQDISCTSPSSTSIL 627
Query: 158 VFWSPHP----NPSVSKYIIQRQNKDGK------FLNVGAVRNRLFVEFFDKDLEDGKKY 207
V W P P N +++Y I+ DG+ L + + + +E LE +Y
Sbjct: 628 VSWQPPPVEKQNGIITEYSIKYTAVDGEDDKPHEILGIPSDTTKYLLE----QLEKWTEY 683
Query: 208 RYQVIAENFMGDKSRPSVIVEGKTKDLPK-EITNVRVSQNLTRHIELSWDKSTQE----D 262
R V A +G ++ +D+P V V + +++SW
Sbjct: 684 RITVTAHTDVGPGPESLSVLIRTNEDVPSGPPRKVEVEAVNSTSVKVSWRSPVPNKQHGQ 743
Query: 263 VIAYRIYASNNRNDKYKFIAQTTNTSYVDKIEK-----DNLTRYYKVVALDKTHLEGALP 317
+ Y+++ N + K + D + T Y V T +GA
Sbjct: 744 IRGYQVHYVRMENGEPKGQPMLKDVMLADAQDMIISGLQPETSYSLTVTAYTTKGDGARS 803
Query: 318 KEPAMGETADRPEAPIITKGTIQDSSALIQWENNPSAKIATYAVYRFEANSK-----TPL 372
K + T P P + Q ++ALIQW + P YR + K T L
Sbjct: 804 KPKLVSTTGAVPGKPRLVINHTQMNTALIQW-HPPVDTFGPLQGYRLKFGRKDMEPLTTL 862
Query: 373 RFGNITKNQFVDKDMKVGVAYRYQVVSVDKDGLESHPSKEVRL 415
F ++ F D+ G +Y +++ + +K G KE+ +
Sbjct: 863 EFSE-KEDHFTATDIHKGASYVFRLSARNKVGFGEEMVKEISI 904
Score = 44.7 bits (104), Expect = 0.002
Identities = 65/311 (20%), Positives = 116/311 (36%), Gaps = 11/311 (3%)
Query: 53 IKTINDVSSVGFEWPKIADTYDIDGFILYRLKKDSKLKRIATIKNPYATHYYDEGLETES 112
+ T + +S+ W + + +I+ K+S+ + I T Y GL S
Sbjct: 330 VVTESTATSITLTWDS-GNPEPVSYYIIQHKPKNSE-ELYKEIDGVATTRYSVAGLSPYS 387
Query: 113 SYTYQLATYKGDKISNLSDPILVKTSFINPVES---VFASLEYPKSVKVFWSP--HPNPS 167
Y +++ S+P+L +TS P + V A + ++ V W PN
Sbjct: 388 DYEFRVVAVNNIGRGPPSEPVLTQTSEQAPSSAPRDVQARMLSSTTILVQWKEPEEPNGQ 447
Query: 168 VSKYIIQRQNKDGKFLNVGAVRNRLFVEFFD-KDLEDGKKYRYQVIAENFMGDKSRPSVI 226
+ Y + + +N N + +L K Y +V+A +GD S I
Sbjct: 448 IQGYRVYYTMDPTQHVNNWMKHNVADSQITTIGNLVPQKTYSVKVLAFTSIGDGPLSSDI 507
Query: 227 VEGKTKDLPKEITNVRVSQNLTRHIELSWDKSTQEDVIAYRIYASNNRNDKYKFIAQTTN 286
+P + N + I LSW + + Y + + + + + I
Sbjct: 508 QVITQTGVPGQPLNFKAEPESETSILLSWTPPRSDTIANYELVYKDGEHGEEQRITIEPG 567
Query: 287 TSYVDKIEKDNLTRYYKVVALDKTHLEGALPKEPAMGETADRPEAP--IITKGTIQDSSA 344
TSY + K N Y+++ A L GA E + +P AP I+ + +S
Sbjct: 568 TSYRLQGLKPNSLYYFRLAARSPQGL-GASTAEISARTMQSKPSAPPQDISCTSPSSTSI 626
Query: 345 LIQWENNPSAK 355
L+ W+ P K
Sbjct: 627 LVSWQPPPVEK 637
>gb|AAF45541.1| (AE003418) sdk gene product [Drosophila melanogaster]
Length = 2221
Score = 46.2 bits (108), Expect = 7e-04
Identities = 55/226 (24%), Positives = 98/226 (43%), Gaps = 24/226 (10%)
Query: 196 FFDKDLEDGKKYRYQVIAENFMGDKSRPSVIVEGKTKDLPKEITNVRVSQNLTRHIELSW 255
F DK E YR Q++A N GD R + I +P ++R S + +E++W
Sbjct: 1749 FLDKFTE----YRIQLLAFNPAGDGPRSAPITVKTLPGVPSAPLHLRFSDITMQSLEVTW 1804
Query: 256 D--KSTQEDVIAYRI-YASNNRNDKY-KFIAQ-TTNTSYVDKIEKDNLTRYYKVVALDKT 310
D K +++ Y + Y + N+K+ K + Q +NT+ + ++ +T + V A
Sbjct: 1805 DPPKFLNGEILGYLVTYETTEENEKFSKQVKQKVSNTTLRVQNLEEEVTYTFTVRAQTSV 1864
Query: 311 HLEGALPKEPAMGETADRPEAP---IITKGTIQDSSALIQWENNPSAKIATYAVYRFEAN 367
+ + G P AP I+TK SS + W N PS + Y EA
Sbjct: 1865 DYGPGISENVTTGPQDGSPVAPRDLILTKTL---SSVEMHWINGPSGR-GPILGYLIEAK 1920
Query: 368 SKTPLRFGNITK-NQFVDKDMKV-------GVAYRYQVVSVDKDGL 405
+ R+ I + + + +D V AY ++V++ ++ G+
Sbjct: 1921 KRDDSRWTKIEQTRKGMMQDFTVSYHILMPSTAYTFRVIAYNRYGI 1966
>gb|AAD34783.1| (AF132195) unknown [Drosophila melanogaster]
Length = 518
Score = 46.2 bits (108), Expect = 7e-04
Identities = 55/226 (24%), Positives = 98/226 (43%), Gaps = 24/226 (10%)
Query: 196 FFDKDLEDGKKYRYQVIAENFMGDKSRPSVIVEGKTKDLPKEITNVRVSQNLTRHIELSW 255
F DK E YR Q++A N GD R + I +P ++R S + +E++W
Sbjct: 46 FLDKFTE----YRIQLLAFNPAGDGPRSAPITVKTLPGVPSAPLHLRFSDITMQSLEVTW 101
Query: 256 D--KSTQEDVIAYRI-YASNNRNDKY-KFIAQ-TTNTSYVDKIEKDNLTRYYKVVALDKT 310
D K +++ Y + Y + N+K+ K + Q +NT+ + ++ +T + V A
Sbjct: 102 DPPKFLNGEILGYLVTYETTEENEKFSKQVKQKVSNTTLRVQNLEEEVTYTFTVRAQTSV 161
Query: 311 HLEGALPKEPAMGETADRPEAP---IITKGTIQDSSALIQWENNPSAKIATYAVYRFEAN 367
+ + G P AP I+TK SS + W N PS + Y EA
Sbjct: 162 DYGPGISENVTTGPQDGSPVAPRDLILTKTL---SSVEMHWINGPSGR-GPILGYLIEAK 217
Query: 368 SKTPLRFGNITK-NQFVDKDMKV-------GVAYRYQVVSVDKDGL 405
+ R+ I + + + +D V AY ++V++ ++ G+
Sbjct: 218 KRDDSRWTKIEQTRKGMMQDFTVSYHILMPSTAYTFRVIAYNRYGI 263
>gb|AAF43605.1|AF197944_1 (AF197944) receptor protein tyrosine phosphatase delta [Xenopus
laevis]
Length = 1896
Score = 45.8 bits (107), Expect = 0.001
Identities = 61/286 (21%), Positives = 108/286 (37%), Gaps = 10/286 (3%)
Query: 78 FILYRLKKDSKLKRIATIKNPYATHYYDEGLETESSYTYQLATYKGDKISNLSDPILVKT 137
+ + + K S ++ I T Y GL S Y +++ S+P++ +T
Sbjct: 347 YYIIQHKPKSSEEQYKEIDGVATTRYSVAGLSPYSEYEFRVVAVNNIGRGPPSEPVMTRT 406
Query: 138 SF---INPVESVFASLEYPKSVKVFWS--PHPNPSVSKYIIQRQNKDGKFLNVGAVRNRL 192
S +P +V A + ++ V W PN + Y + + +N N
Sbjct: 407 SEQAPSSPPRNVQARMLSSTTILVQWEEPEEPNGQIQGYRVYYTMDPTQHINSWTKHNVA 466
Query: 193 FVEFFD-KDLEDGKKYRYQVIAENFMGDKSRPSVIVEGKTKDLPKEITNVRVSQNLTRHI 251
+ +LE K Y +V+A +GD + I +P + N + I
Sbjct: 467 DSQITTIGNLEPQKTYSVKVLAFTSVGDGPLSNDIQVITQTGVPSQPLNFKAEPESETSI 526
Query: 252 ELSWDKSTQEDVIAYRIYASNNRNDKYKFIAQTTNTSYVDKIEKDNLTRYYKVVALDKTH 311
LSW + + +Y +Y + + + + I TSY + K N Y+++ A
Sbjct: 527 LLSWTPPRSDTISSYDLYYKDGDHAE-EVITIDPATSYRLQGLKPNSLYYFRLAARASVG 585
Query: 312 LEGALPKEPAMGETADRPEAP--IITKGTIQDSSALIQWENNPSAK 355
L GA E + +P AP I + +S L+ W P K
Sbjct: 586 L-GASTTEISARTMQSKPSAPPQDIRCNSQSSTSILVSWLPPPVEK 630
Score = 44.7 bits (104), Expect = 0.002
Identities = 38/143 (26%), Positives = 64/143 (44%), Gaps = 8/143 (5%)
Query: 226 IVEGKTKDLPKEITNVRVSQNLTRHIELSWDKSTQEDVIAYRI-YASNNRNDKYKFIAQT 284
I + K LPK V+++ I L+WD E V Y I + + ++YK I
Sbjct: 308 IAQINVKALPKPPGTPMVTESTATSITLTWDSGNPEPVSYYIIQHKPKSSEEQYKEIDGV 367
Query: 285 TNTSYVDKIEKDNLTRYYKVVALDKTHLEGALPKEPAMGETADR-PEAP--IITKGTIQD 341
T Y ++VVA++ ++ P EP M T+++ P +P + +
Sbjct: 368 ATTRYSVAGLSPYSEYEFRVVAVN--NIGRGPPSEPVMTRTSEQAPSSPPRNVQARMLSS 425
Query: 342 SSALIQWE--NNPSAKIATYAVY 362
++ L+QWE P+ +I Y VY
Sbjct: 426 TTILVQWEEPEEPNGQIQGYRVY 448
>pir||T13924 sdk protein - fruit fly (Drosophila melanogaster)
gb|AAD09632.1| (U88578) immunoglobulin superfamily member [Drosophila melanogaster]
Length = 2222
Score = 45.1 bits (105), Expect = 0.002
Identities = 55/226 (24%), Positives = 97/226 (42%), Gaps = 24/226 (10%)
Query: 196 FFDKDLEDGKKYRYQVIAENFMGDKSRPSVIVEGKTKDLPKEITNVRVSQNLTRHIELSW 255
F DK E YR Q++A N GD R + I +P ++R S + +E++W
Sbjct: 1750 FLDKFTE----YRIQLLAFNPAGDGPRSAPITVKTLPGVPSAPLHLRFSDITMQSLEVTW 1805
Query: 256 D--KSTQEDVIAYRI-YASNNRNDKY-KFIAQ-TTNTSYVDKIEKDNLTRYYKVVALDKT 310
D K ++ Y + Y + N+K+ K + Q +NT+ + ++ +T + V A
Sbjct: 1806 DPPKFLNGEIKGYLVTYETTEENEKFSKQVKQKVSNTTLRVQNLEEEVTYTFTVRAQTSV 1865
Query: 311 HLEGALPKEPAMGETADRPEAP---IITKGTIQDSSALIQWENNPSAKIATYAVYRFEAN 367
+ + G P AP I+TK SS + W N PS + Y EA
Sbjct: 1866 DYGPGISENVTTGPQDGSPVAPRDLILTKSL---SSVEMHWINGPSGR-GPILGYLIEAK 1921
Query: 368 SKTPLRFGNITK-NQFVDKDMKV-------GVAYRYQVVSVDKDGL 405
+ R+ I + + + +D V AY ++V++ ++ G+
Sbjct: 1922 KRDDSRWTKIEQTRKGMMQDFTVSYHILMPSTAYTFRVIAYNRYGI 1967
>pir||C54689 protein-tyrosine-phosphatase (EC 3.1.3.48), receptor type delta,
splice form B precursor - mouse
Length = 1894
Score = 44.7 bits (104), Expect = 0.002
Identities = 59/263 (22%), Positives = 99/263 (37%), Gaps = 10/263 (3%)
Query: 101 THYYDEGLETESSYTYQLATYKGDKISNLSDPILVKTSFINPVES---VFASLEYPKSVK 157
T Y GL S Y +++ S+P+L +TS P + V A + ++
Sbjct: 371 TRYSVAGLSPYSDYEFRVVAVNNIGRGPASEPVLTQTSEQTPSSAPRDVQARMLSSTTIL 430
Query: 158 VFWSP--HPNPSVSKYIIQRQNKDGKFLNVGAVRNRLFVEFFD-KDLEDGKKYRYQVIAE 214
V W PN + Y + + +N N + +L K Y +V+A
Sbjct: 431 VQWKEPEEPNGQIQGYRVYYTMDPTQHVNNWMKHNVADSQITTIGNLVPQKTYSVKVLAF 490
Query: 215 NFMGDKSRPSVIVEGKTKDLPKEITNVRVSQNLTRHIELSWDKSTQEDVIAYRIYASNNR 274
+GD S I +P + N + I LSW ++ + +Y + +
Sbjct: 491 TSIGDGPLSSDIQVITQTGVPGQPLNFKAEPESETSILLSWTPPREDTIASYELVDRDGD 550
Query: 275 NDKYKFIAQTTNTSYVDKIEKDNLTRYYKVVALDKTHLEGALPKEPAMGETADRPEAP-- 332
+ + I TSY + K N Y+++ A L GA E T +P AP
Sbjct: 551 QGEEQRITIEPGTSYRLQGLKPNSLYYFRLSATSPQGL-GASTAE-ISARTMQKPSAPPQ 608
Query: 333 IITKGTIQDSSALIQWENNPSAK 355
I+ + +S L+ W+ P K
Sbjct: 609 DISCTSPSSTSILVSWQPPPVEK 631
Score = 42.7 bits (99), Expect = 0.008
Identities = 68/339 (20%), Positives = 127/339 (37%), Gaps = 33/339 (9%)
Query: 101 THYYDEGLETESSYTYQLATYK----GDKISNLSDPILVKTSFINPVESVFASLEYPKSV 156
T Y +GL+ S Y ++L+ G + +S + K S P + + + S+
Sbjct: 563 TSYRLQGLKPNSLYYFRLSATSPQGLGASTAEISARTMQKPSA--PPQDISCTSPSSTSI 620
Query: 157 KVFWSPHP----NPSVSKYIIQRQNKDGKFLNVGAV--RNRLFVEFFDKDLEDGKKYRYQ 210
V W P P N +++Y ++ DG+ + + ++ + LE +YR
Sbjct: 621 LVSWQPPPVEKQNGIITEYSLKYAAVDGEDYKPHEIIGNSSDTTKYLLEQLEKWTEYRIT 680
Query: 211 VIAENFMGDKSRPSVIVEGKTKDLPK-EITNVRVSQNLTRHIELSWDKSTQE----DVIA 265
V A +G ++ +D+P V V +++SW +
Sbjct: 681 VTAHTDVGPWPESLSVLIRTDEDVPSGPPRKVEVEAVNATAVKVSWRSPVPNKQHGQIRG 740
Query: 266 YRIYASNNRNDKYK------FIAQTTNTSYVDKIEKDNLTRYYKVVALDKTHLEGALPKE 319
Y+++ N + K + + ++ + T Y V T +GA K
Sbjct: 741 YQVHYVKMENGEPKSAMLKDVMLADAQDMIISGLQPE--TSYSLTVTAYTTKGDGARSKP 798
Query: 320 PAMGETADRPEAPIITKGTIQDSSALIQWENNPSAKIATYAVYRFEANSK-----TPLRF 374
+ T P P + Q ++ALIQW +P YR + K T L F
Sbjct: 799 KLVSTTGSVPGKPRLVINHTQMNTALIQW--HPPVDTFGLQGYRLKFGRKDMEPLTTLEF 856
Query: 375 GNITKNQFVDKDMKVGVAYRYQVVSVDKDGLESHPSKEV 413
++ F D+ G +Y +++ + +K G KE+
Sbjct: 857 SE-KEDHFTATDIHKGASYVFRLSARNKVGFGEEMVKEI 894
>pir||S10789 amylase A-180 - alkaliphilic eubacterium 163-26
emb|CAA37453.1| (X53373) precursor polypeptide (AA -37 to 1647) [unidentified
bacterium]
Length = 1684
Score = 44.7 bits (104), Expect = 0.002
Identities = 45/189 (23%), Positives = 78/189 (40%), Gaps = 26/189 (13%)
Query: 235 PKEITNVRVSQNLTRHIELSWDKSTQEDVIAYRIYASNNRNDKYKFIAQTTNTSYVDKIE 294
PK ++ V V++ + WD+S V+ Y I + +A T T++ D+
Sbjct: 799 PKNLSVVNVTETT---VTFEWDQSDGY-VVEYEILRDED------VVASTIRTTFTDEDL 848
Query: 295 KDNLTRYYKVVALDKTHLEGALPKEPAMGETA---DRPEAPI-----ITKGTIQDSSALI 346
+ T Y VVA+ + + A P E T D P+ P + I D++ I
Sbjct: 849 NPDTTYTYSVVAVGEGGQKSA-PSEALKVTTLEENDEPKEPAEAPENLRIADITDTTVTI 907
Query: 347 QWENNPSAKIATYAVYRFEANSKTPLRFGNITKNQFVDKDMKVGVAYRYQVVSVDKDGLE 406
W N + + Y V R + G T+ F+D + Y Y +V++ G +
Sbjct: 908 NW-NASNGYVTGYEVLR------DGVVIGETTRTTFIDTGLDADRTYTYTIVALGDGGQK 960
Query: 407 SHPSKEVRL 415
S PS+ + +
Sbjct: 961 SDPSEALEV 969
>ref|NP_241982.1| (NC_002570) BH1116~unknown conserved protein [Bacillus halodurans]
dbj|BAB04835.1| (AP001511) BH1116~unknown conserved protein [Bacillus halodurans]
Length = 1063
Score = 44.3 bits (103), Expect = 0.003
Identities = 37/174 (21%), Positives = 71/174 (40%), Gaps = 8/174 (4%)
Query: 235 PKEITNVRVSQNLTRHIELSWDKSTQEDVIAYRIYASNNRNDKYKFIAQTTNTSYVDKIE 294
P+E+ + ++ELSW + E Y +Y + +++Y IA+ T Y D
Sbjct: 174 PEELDVTEIQLGDPTYVELSWKEV--EHANHYHVYRKEDGDEEYMKIAEEQQTVYRDMEA 231
Query: 295 KDNLTRYYKVVALDKTHLEGALPKEPAM---GETADRPEAPIITK-GTIQDSSALIQWEN 350
T Y V A+ + +E + + E ++P AP K + + ++W
Sbjct: 232 ILGATYQYVVTAVGQDEVESHKSEVLTVKLFDEAVEKPNAPDEMKVASALSNGVALEWAQ 291
Query: 351 NPSAKIATYAVYRFEANSKTPLRFGNITKNQFVDKDMKVGVAYRYQVVSVDKDG 404
A Y VYR + + T+ + D D+ + Y++ +V++ G
Sbjct: 292 TNDALF--YYVYRAKREEGPFTKVATTTEASYTDHDVLTTDLFYYKIEAVNEGG 343
>pir||D54689 protein-tyrosine-phosphatase (EC 3.1.3.48), receptor type delta,
splice form D precursor - mouse
Length = 1691
Score = 43.9 bits (102), Expect = 0.004
Identities = 59/263 (22%), Positives = 98/263 (36%), Gaps = 10/263 (3%)
Query: 101 THYYDEGLETESSYTYQLATYKGDKISNLSDPILVKTSFINPVES---VFASLEYPKSVK 157
T Y GL S Y +++ S+P+L +TS P + V A + ++
Sbjct: 168 TRYSVAGLSPYSDYEFRVVAVNNIGRGPASEPVLTQTSEQTPSSAPRDVQARMLSSTTIL 227
Query: 158 VFWSP--HPNPSVSKYIIQRQNKDGKFLNVGAVRNRLFVEFFD-KDLEDGKKYRYQVIAE 214
V W PN + Y + + +N N + +L K Y +V+A
Sbjct: 228 VQWKEPEEPNGQIQGYRVYYTMDPTQHVNNWMKHNVADSQITTIGNLVPQKTYSVKVLAF 287
Query: 215 NFMGDKSRPSVIVEGKTKDLPKEITNVRVSQNLTRHIELSWDKSTQEDVIAYRIYASNNR 274
+GD S I +P + N + I LSW + + +Y + +
Sbjct: 288 TSIGDGPLSSDIQVITQTGVPGQPLNFKAEPESETSILLSWTPPRSDTIASYELVDRDGD 347
Query: 275 NDKYKFIAQTTNTSYVDKIEKDNLTRYYKVVALDKTHLEGALPKEPAMGETADRPEAP-- 332
+ + I TSY + K N Y+++ A L GA E T +P AP
Sbjct: 348 QGEEQRITIEPGTSYRLQGLKPNSLYYFRLSATSPQGL-GASTAE-ISARTMQKPSAPPQ 405
Query: 333 IITKGTIQDSSALIQWENNPSAK 355
I+ + +S L+ W+ P K
Sbjct: 406 DISCTSPSSTSILVSWQPPPVEK 428
Score = 42.7 bits (99), Expect = 0.008
Identities = 68/339 (20%), Positives = 127/339 (37%), Gaps = 33/339 (9%)
Query: 101 THYYDEGLETESSYTYQLATYK----GDKISNLSDPILVKTSFINPVESVFASLEYPKSV 156
T Y +GL+ S Y ++L+ G + +S + K S P + + + S+
Sbjct: 360 TSYRLQGLKPNSLYYFRLSATSPQGLGASTAEISARTMQKPSA--PPQDISCTSPSSTSI 417
Query: 157 KVFWSPHP----NPSVSKYIIQRQNKDGKFLNVGAV--RNRLFVEFFDKDLEDGKKYRYQ 210
V W P P N +++Y ++ DG+ + + ++ + LE +YR
Sbjct: 418 LVSWQPPPVEKQNGIITEYSLKYAAVDGEDYKPHEIIGNSSDTTKYLLEQLEKWTEYRIT 477
Query: 211 VIAENFMGDKSRPSVIVEGKTKDLPK-EITNVRVSQNLTRHIELSWDKSTQE----DVIA 265
V A +G ++ +D+P V V +++SW +
Sbjct: 478 VTAHTDVGPWPESLSVLIRTDEDVPSGPPRKVEVEAVNATAVKVSWRSPVPNKQHGQIRG 537
Query: 266 YRIYASNNRNDKYK------FIAQTTNTSYVDKIEKDNLTRYYKVVALDKTHLEGALPKE 319
Y+++ N + K + + ++ + T Y V T +GA K
Sbjct: 538 YQVHYVKMENGEPKSAMLKDVMLADAQDMIISGLQPE--TSYSLTVTAYTTKGDGARSKP 595
Query: 320 PAMGETADRPEAPIITKGTIQDSSALIQWENNPSAKIATYAVYRFEANSK-----TPLRF 374
+ T P P + Q ++ALIQW +P YR + K T L F
Sbjct: 596 KLVSTTGSVPGKPRLVINHTQMNTALIQW--HPPVDTFGLQGYRLKFGRKDMEPLTTLEF 653
Query: 375 GNITKNQFVDKDMKVGVAYRYQVVSVDKDGLESHPSKEV 413
++ F D+ G +Y +++ + +K G KE+
Sbjct: 654 SE-KEDHFTATDIHKGASYVFRLSARNKVGFGEEMVKEI 691
>gb|EAA06917.1| (AAAB01008847) ebiP1527 [Anopheles gambiae str. PEST]
Length = 2222
Score = 43.5 bits (101), Expect = 0.005
Identities = 53/223 (23%), Positives = 86/223 (37%), Gaps = 19/223 (8%)
Query: 196 FFDKDLEDGKKYRYQVIAENFMGDKSRPSVIVEGKTKDLPKEITNVRVSQNLTRHIELSW 255
F DK E YR Q++A N GD R + I LP T + S + +SW
Sbjct: 1735 FLDKYTE----YRIQILAFNPAGDGPRSAPITVKTMAGLPGPPTQLHFSDITMNSLTVSW 1790
Query: 256 DKSTQED-VIAYRIYASNNRNDKYKFIAQ----TTNTSYVDKIEKDNLTRYYKVVALDKT 310
D + + +I I A D KF Q T TS + + ++ +T Y V
Sbjct: 1791 DLPRKRNGLIVGYIVAYETTEDNEKFSKQVKQKVTGTSLIVQNLEEEVT-YTFTVRAQTI 1849
Query: 311 HLEGALPKEPAMGETADRPEAPIITKGTIQDSSALIQWENNPSAKIATYAVYRFEANSKT 370
A+ G P +P + +S + W N S K Y E+ +
Sbjct: 1850 DYGPAISGNVTTGPQEGSPGSPRDLMISKSQASVQMHWINGQSGK-GPILGYYIESKKRD 1908
Query: 371 PLRF--------GNITKNQFVDKDMKVGVAYRYQVVSVDKDGL 405
LR+ G I + +++ AY+++V+S ++ G+
Sbjct: 1909 DLRWETVARSTNGPIQEFTVSFQNLLPSTAYKFRVISYNRYGI 1951
>ref|NP_062016.1| (NM_019143) fibronectin 1 [Rattus norvegicus]
sp|P04937|FINC_RAT Fibronectin precursor (FN)
pir||S14428 fibronectin precursor - rat
emb|CAA34020.1| (X15906) precursor polypeptide (AA -32 to 2445) [Rattus norvegicus]
Length = 2477
Score = 43.5 bits (101), Expect = 0.005
Identities = 82/339 (24%), Positives = 136/339 (39%), Gaps = 36/339 (10%)
Query: 90 KRIATIKNPYATHYYDEGLETESSYTYQL--ATYKGDKISNLSDPILV--KTSFINPVES 145
K ATI N ++ + YT L T +GD ++ S P+ + +T P +
Sbjct: 1590 KSTATINN----------IKPGADYTITLYAVTGRGDSPAS-SKPVSINYQTEIDKPSQM 1638
Query: 146 VFASLEYPKSVKVFWSPHPNPSVSKYIIQRQNKDG----KFLNVGAVRNRLFVEFFDKDL 201
++ S+ V W P +P V+ Y + K+G K V + + +E +
Sbjct: 1639 QVTDVQ-DNSISVRWLPSTSP-VTGYRVTTAPKNGLGPTKSQTVSPDQTEMTIEGLQPTV 1696
Query: 202 EDGKKYRYQVIAENFMGDKSRPSVIVEGKTKDLPKEITNVRVSQNLTRHIELSWDKSTQE 261
E Y V A+N G+ S+P V D PK + V + I+++W+ S Q
Sbjct: 1697 E----YVVSVYAQNRNGE-SQPLVQTAVTNIDRPKGLAFTDVDVD---SIKIAWE-SPQG 1747
Query: 262 DVIAYRIYASNNRNDKYKFIAQTTNTSYVDKIEKDNLTRYYKVVALDKTHLEGALPKEPA 321
V YR+ S+ + ++ D E L R + L G + +P
Sbjct: 1748 QVSRYRVTYSSPEDGIHELFPAPDGDE--DTAELHGL-RPGSEYTVSVVALHGGMESQPL 1804
Query: 322 MGETADRPEAPIITKGT-IQDSSALIQWENNPSAKIATYAVYRFEANSKTPLRFGNITKN 380
+G + AP K T + ++ QW PS K+ Y V P++ N++ +
Sbjct: 1805 IGVQSTAIPAPTNLKFTQVSPTTLTAQW-TAPSVKLTGYRVRVTPKEKTGPMKEINLSPD 1863
Query: 381 QFVDKDMKVGVAYRYQV-VSVDKDGLESHPSKEVRLFLE 418
+ VA +Y+V V KD L S P++ V LE
Sbjct: 1864 STSVIVSGLMVATKYEVSVYALKDTLTSRPAQGVVTTLE 1902
>ref|XP_136516.1| (XM_136516) similar to Usher syndrome type IIa protein [Mus
musculus]
Length = 728
Score = 43.5 bits (101), Expect = 0.005
Identities = 59/266 (22%), Positives = 107/266 (40%), Gaps = 31/266 (11%)
Query: 153 PKSVKVFWSPHPNPS--VSKYIIQRQNKDGKFLNVGAVRNRLFVEFFDKDLEDGKKYRYQ 210
P+S+++ W+P NP + Y ++R DG + VG L + D L G +Y Y
Sbjct: 407 PESIEITWTPPRNPHGLIRSYELRR---DGAIVYVG-----LETRYHDFTLAPGVEYSYS 458
Query: 211 VIAENFMGDKSRPSVIVEGKTK-DLPKEITNVRVSQNLTRHIELSWDK--STQEDVIAYR 267
V A N G P +V+G+T P + ++ + WD T +I Y
Sbjct: 459 VTATNSRGSVLSP--LVKGQTSPSAPSGLQPPKLHSGDALELLADWDPPVRTNGKIINYT 516
Query: 268 IYASNNRNDKYKFIA-QTTNTSY-VDKIEKDNLTRYYKV-VALDKTHLEGALPKEPAMGE 324
++ K + ++ TT++S+ + +L +++ V + G E +
Sbjct: 517 LFVREMFEGKTRAMSINTTHSSFGTRSLTVKHLKPFHRYEVRVQACTALGCTSSEWTSTQ 576
Query: 325 TAD----RPEAPIITKGTIQ---DSSALIQWEN--NPSAKIATYAVYRFEA----NSKTP 371
T++ R AP + T + W P+ KI + +YR + + +
Sbjct: 577 TSEVPPLRQPAPHLEVQTATGGFQPIVAVWWAGPLQPNGKIICFELYRRQVAAWPGTSSS 636
Query: 372 LRFGNITKNQFVDKDMKVGVAYRYQV 397
L N + F+D ++ Y YQV
Sbjct: 637 LLIYNGSFRSFMDSELLPFTEYEYQV 662
>ref|NP_477290.1| (NM_057942) sdk-P2 [Drosophila melanogaster]
Length = 2232
Score = 43.5 bits (101), Expect = 0.005
Identities = 44/168 (26%), Positives = 74/168 (43%), Gaps = 15/168 (8%)
Query: 196 FFDKDLEDGKKYRYQVIAENFMGDKSRPSVIVEGKTKDLPKEITNVRVSQNLTRHIELSW 255
F DK E YR Q++A N GD R + I +P ++R S + +E++W
Sbjct: 1752 FLDKFTE----YRIQLLAFNPAGDGPRSAPITVKTLPGVPSAPLHLRFSDITMQSLEVTW 1807
Query: 256 D--KSTQEDVIAYRI-YASNNRNDKY-KFIAQ-TTNTSYVDKIEKDNLTRYYKVVALDKT 310
D K +++ Y + Y + N+K+ K + Q +NT+ + ++ +T + V A
Sbjct: 1808 DPPKFLNGEILGYLVTYETTEENEKFSKQVKQKVSNTTLRVQNLEEEVTYTFTVRAQTSV 1867
Query: 311 HLEGALPKEPAMGETADRPEAP---IITKGTIQDSSALIQWENNPSAK 355
+ + G P AP I+TK SS + W N PS +
Sbjct: 1868 DYGPGISENVTTGPQDGSPVAPRDLILTKTL---SSVEMHWINGPSGR 1912
>pir||S20898 titin - human (fragments)
Length = 4731
Score = 43.1 bits (100), Expect = 0.006
Identities = 53/250 (21%), Positives = 105/250 (41%), Gaps = 18/250 (7%)
Query: 164 PNPSVSKYIIQRQNKDGKFLNVGAVRNRLFVEFFDKDLEDGKKYRYQVIAENFMGDKSRP 223
P P V + + +D ++V + L ++ ++ + GK Y + EN G KS
Sbjct: 1244 PTPEVKWGKVDGEIRDAAIIDVTSSFTSLVLDNVNR-YDSGK---YTLTLENSSGTKS-- 1297
Query: 224 SVIVEGKTKDLPKEITNVRVSQNLTRHIELSWDKSTQEDVIAYRIYASNNRNDKYKFIAQ 283
V + D P N++V++ + ++W+ + + Y R K A
Sbjct: 1298 -AFVTVRVLDTPSPPVNLKVTEITKDSVSITWEPPLLDGGSKIKNYIVEKREATRKSYAA 1356
Query: 284 TTNTSYVDKIEKDNL----TRYYKVVALDKTHLEGALPKEPAMG-ETADRPEAP-IITKG 337
+ + + D L + Y++V A ++ + LP + A + A+ P+ P IT
Sbjct: 1357 VVTNCHKNSWKIDQLQEGCSYYFRVTAENEYGI--GLPAQTADPIKVAEVPQPPGKITVD 1414
Query: 338 TIQDSSALIQW---ENNPSAKIATYAVYRFEANSKTPLRFGNITKNQFVDKDMKVGVAYR 394
+ +S + W E++ +KI Y V +S+ + Q V ++ G Y
Sbjct: 1415 DVTRNSVSLSWTKPEHDGGSKIIQYIVEMQAKHSEKWSECARVKSLQAVITNLTQGEEYL 1474
Query: 395 YQVVSVDKDG 404
++VV+V++ G
Sbjct: 1475 FRVVAVNEKG 1484
>emb|CAA45940.1| (X64699) titin [Homo sapiens]
Length = 531
Score = 43.1 bits (100), Expect = 0.006
Identities = 53/250 (21%), Positives = 105/250 (41%), Gaps = 18/250 (7%)
Query: 164 PNPSVSKYIIQRQNKDGKFLNVGAVRNRLFVEFFDKDLEDGKKYRYQVIAENFMGDKSRP 223
P P V + + +D ++V + L ++ ++ + GK Y + EN G KS
Sbjct: 144 PTPEVKWGKVDGEIRDAAIIDVTSSFTSLVLDNVNR-YDSGK---YTLTLENSSGTKS-- 197
Query: 224 SVIVEGKTKDLPKEITNVRVSQNLTRHIELSWDKSTQEDVIAYRIYASNNRNDKYKFIAQ 283
V + D P N++V++ + ++W+ + + Y R K A
Sbjct: 198 -AFVTVRVLDTPSPPVNLKVTEITKDSVSITWEPPLLDGGSKIKNYIVEKREATRKSYAA 256
Query: 284 TTNTSYVDKIEKDNL----TRYYKVVALDKTHLEGALPKEPAMG-ETADRPEAP-IITKG 337
+ + + D L + Y++V A ++ + LP + A + A+ P+ P IT
Sbjct: 257 VVTNCHKNSWKIDQLQEGCSYYFRVTAENEYGI--GLPAQTADPIKVAEVPQPPGKITVD 314
Query: 338 TIQDSSALIQW---ENNPSAKIATYAVYRFEANSKTPLRFGNITKNQFVDKDMKVGVAYR 394
+ +S + W E++ +KI Y V +S+ + Q V ++ G Y
Sbjct: 315 DVTRNSVSLSWTKPEHDGGSKIIQYIVEMQAKHSEKWSECARVKSLQAVITNLTQGEEYL 374
Query: 395 YQVVSVDKDG 404
++VV+V++ G
Sbjct: 375 FRVVAVNEKG 384
>emb|CAD12455.1| (AJ277892) N2B-Titin Isoform [Homo sapiens]
Length = 26926
Score = 43.1 bits (100), Expect = 0.006
Identities = 53/250 (21%), Positives = 105/250 (41%), Gaps = 18/250 (7%)
Query: 164 PNPSVSKYIIQRQNKDGKFLNVGAVRNRLFVEFFDKDLEDGKKYRYQVIAENFMGDKSRP 223
P P V + + +D ++V + L ++ ++ + GK Y + EN G KS
Sbjct: 16473 PTPEVKWGKVDGEIRDAAIIDVTSSFTSLVLDNVNR-YDSGK---YTLTLENSSGTKS-- 16526
Query: 224 SVIVEGKTKDLPKEITNVRVSQNLTRHIELSWDKSTQEDVIAYRIYASNNRNDKYKFIAQ 283
V + D P N++V++ + ++W+ + + Y R K A
Sbjct: 16527 -AFVTVRVLDTPSPPVNLKVTEITKDSVSITWEPPLLDGGSKIKNYIVEKREATRKSYAA 16585
Query: 284 TTNTSYVDKIEKDNL----TRYYKVVALDKTHLEGALPKEPAMG-ETADRPEAP-IITKG 337
+ + + D L + Y++V A ++ + LP + A + A+ P+ P IT
Sbjct: 16586 VVTNCHKNSWKIDQLQEGCSYYFRVTAENEYGI--GLPAQTADPIKVAEVPQPPGKITVD 16643
Query: 338 TIQDSSALIQW---ENNPSAKIATYAVYRFEANSKTPLRFGNITKNQFVDKDMKVGVAYR 394
+ +S + W E++ +KI Y V +S+ + Q V ++ G Y
Sbjct: 16644 DVTRNSVSLSWTKPEHDGGSKIIQYIVEMQAKHSEKWSECARVKSLQAVITNLTQGEEYL 16703
Query: 395 YQVVSVDKDG 404
++VV+V++ G
Sbjct: 16704 FRVVAVNEKG 16713
>ref|NP_597681.1| (NM_133437) titin, isoform novex-2; connectin; CMH9, included [Homo
sapiens]
Length = 27118
Score = 43.1 bits (100), Expect = 0.006
Identities = 53/250 (21%), Positives = 105/250 (41%), Gaps = 18/250 (7%)
Query: 164 PNPSVSKYIIQRQNKDGKFLNVGAVRNRLFVEFFDKDLEDGKKYRYQVIAENFMGDKSRP 223
P P V + + +D ++V + L ++ ++ + GK Y + EN G KS
Sbjct: 16665 PTPEVKWGKVDGEIRDAAIIDVTSSFTSLVLDNVNR-YDSGK---YTLTLENSSGTKS-- 16718
Query: 224 SVIVEGKTKDLPKEITNVRVSQNLTRHIELSWDKSTQEDVIAYRIYASNNRNDKYKFIAQ 283
V + D P N++V++ + ++W+ + + Y R K A
Sbjct: 16719 -AFVTVRVLDTPSPPVNLKVTEITKDSVSITWEPPLLDGGSKIKNYIVEKREATRKSYAA 16777
Query: 284 TTNTSYVDKIEKDNL----TRYYKVVALDKTHLEGALPKEPAMG-ETADRPEAP-IITKG 337
+ + + D L + Y++V A ++ + LP + A + A+ P+ P IT
Sbjct: 16778 VVTNCHKNSWKIDQLQEGCSYYFRVTAENEYGI--GLPAQTADPIKVAEVPQPPGKITVD 16835
Query: 338 TIQDSSALIQW---ENNPSAKIATYAVYRFEANSKTPLRFGNITKNQFVDKDMKVGVAYR 394
+ +S + W E++ +KI Y V +S+ + Q V ++ G Y
Sbjct: 16836 DVTRNSVSLSWTKPEHDGGSKIIQYIVEMQAKHSEKWSECARVKSLQAVITNLTQGEEYL 16895
Query: 395 YQVVSVDKDG 404
++VV+V++ G
Sbjct: 16896 FRVVAVNEKG 16905
>ref|NP_596869.1| (NM_133378) titin, isoform N2-A; connectin; CMH9, included [Homo
sapiens]
Length = 34350
Score = 43.1 bits (100), Expect = 0.006
Identities = 53/250 (21%), Positives = 105/250 (41%), Gaps = 18/250 (7%)
Query: 164 PNPSVSKYIIQRQNKDGKFLNVGAVRNRLFVEFFDKDLEDGKKYRYQVIAENFMGDKSRP 223
P P V + + +D ++V + L ++ ++ + GK Y + EN G KS
Sbjct: 23897 PTPEVKWGKVDGEIRDAAIIDVTSSFTSLVLDNVNR-YDSGK---YTLTLENSSGTKS-- 23950
Query: 224 SVIVEGKTKDLPKEITNVRVSQNLTRHIELSWDKSTQEDVIAYRIYASNNRNDKYKFIAQ 283
V + D P N++V++ + ++W+ + + Y R K A
Sbjct: 23951 -AFVTVRVLDTPSPPVNLKVTEITKDSVSITWEPPLLDGGSKIKNYIVEKREATRKSYAA 24009
Query: 284 TTNTSYVDKIEKDNL----TRYYKVVALDKTHLEGALPKEPAMG-ETADRPEAP-IITKG 337
+ + + D L + Y++V A ++ + LP + A + A+ P+ P IT
Sbjct: 24010 VVTNCHKNSWKIDQLQEGCSYYFRVTAENEYGI--GLPAQTADPIKVAEVPQPPGKITVD 24067
Query: 338 TIQDSSALIQW---ENNPSAKIATYAVYRFEANSKTPLRFGNITKNQFVDKDMKVGVAYR 394
+ +S + W E++ +KI Y V +S+ + Q V ++ G Y
Sbjct: 24068 DVTRNSVSLSWTKPEHDGGSKIIQYIVEMQAKHSEKWSECARVKSLQAVITNLTQGEEYL 24127
Query: 395 YQVVSVDKDG 404
++VV+V++ G
Sbjct: 24128 FRVVAVNEKG 24137
>pir||I38344 titin, cardiac muscle [validated] - human
Length = 26926
Score = 43.1 bits (100), Expect = 0.006
Identities = 53/250 (21%), Positives = 105/250 (41%), Gaps = 18/250 (7%)
Query: 164 PNPSVSKYIIQRQNKDGKFLNVGAVRNRLFVEFFDKDLEDGKKYRYQVIAENFMGDKSRP 223
P P V + + +D ++V + L ++ ++ + GK Y + EN G KS
Sbjct: 16473 PTPEVKWGKVDGEIRDAAIIDVTSSFTSLVLDNVNR-YDSGK---YTLTLENSSGTKS-- 16526
Query: 224 SVIVEGKTKDLPKEITNVRVSQNLTRHIELSWDKSTQEDVIAYRIYASNNRNDKYKFIAQ 283
V + D P N++V++ + ++W+ + + Y R K A
Sbjct: 16527 -AFVTVRVLDTPSPPVNLKVTEITKDSVSITWEPPLLDGGSKIKNYIVEKREATRKSYAA 16585
Query: 284 TTNTSYVDKIEKDNL----TRYYKVVALDKTHLEGALPKEPAMG-ETADRPEAP-IITKG 337
+ + + D L + Y++V A ++ + LP + A + A+ P+ P IT
Sbjct: 16586 VVTNCHKNSWKIDQLQEGCSYYFRVTAENEYGI--GLPAQTADPIKVAEVPQPPGKITVD 16643
Query: 338 TIQDSSALIQW---ENNPSAKIATYAVYRFEANSKTPLRFGNITKNQFVDKDMKVGVAYR 394
+ +S + W E++ +KI Y V +S+ + Q V ++ G Y
Sbjct: 16644 DVTRNSVSLSWTKPEHDGGSKIIQYIVEMQAKHSEKWSECARVKSLQAVITNLTQGEEYL 16703
Query: 395 YQVVSVDKDG 404
++VV+V++ G
Sbjct: 16704 FRVVAVNEKG 16713
>emb|CAA62188.1| (X90568) Protein sequence and annotation available soon via Swiss-Prot;
available at present via e-mail from
LABEIT@EMBL-Heidelberg.DE [Homo sapiens]
Length = 26926
Score = 43.1 bits (100), Expect = 0.006
Identities = 53/250 (21%), Positives = 105/250 (41%), Gaps = 18/250 (7%)
Query: 164 PNPSVSKYIIQRQNKDGKFLNVGAVRNRLFVEFFDKDLEDGKKYRYQVIAENFMGDKSRP 223
P P V + + +D ++V + L ++ ++ + GK Y + EN G KS
Sbjct: 16473 PTPEVKWGKVDGEIRDAAIIDVTSSFTSLVLDNVNR-YDSGK---YTLTLENSSGTKS-- 16526
Query: 224 SVIVEGKTKDLPKEITNVRVSQNLTRHIELSWDKSTQEDVIAYRIYASNNRNDKYKFIAQ 283
V + D P N++V++ + ++W+ + + Y R K A
Sbjct: 16527 -AFVTVRVLDTPSPPVNLKVTEITKDSVSITWEPPLLDGGSKIKNYIVEKREATRKSYAA 16585
Query: 284 TTNTSYVDKIEKDNL----TRYYKVVALDKTHLEGALPKEPAMG-ETADRPEAP-IITKG 337
+ + + D L + Y++V A ++ + LP + A + A+ P+ P IT
Sbjct: 16586 VVTNCHKNSWKIDQLQEGCSYYFRVTAENEYGI--GLPAQTADPIKVAEVPQPPGKITVD 16643
Query: 338 TIQDSSALIQW---ENNPSAKIATYAVYRFEANSKTPLRFGNITKNQFVDKDMKVGVAYR 394
+ +S + W E++ +KI Y V +S+ + Q V ++ G Y
Sbjct: 16644 DVTRNSVSLSWTKPEHDGGSKIIQYIVEMQAKHSEKWSECARVKSLQAVITNLTQGEEYL 16703
Query: 395 YQVVSVDKDG 404
++VV+V++ G
Sbjct: 16704 FRVVAVNEKG 16713
>ref|XP_038278.2| (XM_038278) similar to titin, isoform N2-A; connectin; CMH9, included
[Homo sapiens]
Length = 16726
Score = 43.1 bits (100), Expect = 0.006
Identities = 53/250 (21%), Positives = 105/250 (41%), Gaps = 18/250 (7%)
Query: 164 PNPSVSKYIIQRQNKDGKFLNVGAVRNRLFVEFFDKDLEDGKKYRYQVIAENFMGDKSRP 223
P P V + + +D ++V + L ++ ++ + GK Y + EN G KS
Sbjct: 6273 PTPEVKWGKVDGEIRDAAIIDVTSSFTSLVLDNVNR-YDSGK---YTLTLENSSGTKS-- 6326
Query: 224 SVIVEGKTKDLPKEITNVRVSQNLTRHIELSWDKSTQEDVIAYRIYASNNRNDKYKFIAQ 283
V + D P N++V++ + ++W+ + + Y R K A
Sbjct: 6327 -AFVTVRVLDTPSPPVNLKVTEITKDSVSITWEPPLLDGGSKIKNYIVEKREATRKSYAA 6385
Query: 284 TTNTSYVDKIEKDNL----TRYYKVVALDKTHLEGALPKEPAMG-ETADRPEAP-IITKG 337
+ + + D L + Y++V A ++ + LP + A + A+ P+ P IT
Sbjct: 6386 VVTNCHKNSWKIDQLQEGCSYYFRVTAENEYGI--GLPAQTADPIKVAEVPQPPGKITVD 6443
Query: 338 TIQDSSALIQW---ENNPSAKIATYAVYRFEANSKTPLRFGNITKNQFVDKDMKVGVAYR 394
+ +S + W E++ +KI Y V +S+ + Q V ++ G Y
Sbjct: 6444 DVTRNSVSLSWTKPEHDGGSKIIQYIVEMQAKHSEKWSECARVKSLQAVITNLTQGEEYL 6503
Query: 395 YQVVSVDKDG 404
++VV+V++ G
Sbjct: 6504 FRVVAVNEKG 6513
>ref|NP_003310.2| (NM_003319) titin, isoform N2-B; connectin; CMH9, included [Homo
sapiens]
Length = 26926
Score = 43.1 bits (100), Expect = 0.006
Identities = 53/250 (21%), Positives = 105/250 (41%), Gaps = 18/250 (7%)
Query: 164 PNPSVSKYIIQRQNKDGKFLNVGAVRNRLFVEFFDKDLEDGKKYRYQVIAENFMGDKSRP 223
P P V + + +D ++V + L ++ ++ + GK Y + EN G KS
Sbjct: 16473 PTPEVKWGKVDGEIRDAAIIDVTSSFTSLVLDNVNR-YDSGK---YTLTLENSSGTKS-- 16526
Query: 224 SVIVEGKTKDLPKEITNVRVSQNLTRHIELSWDKSTQEDVIAYRIYASNNRNDKYKFIAQ 283
V + D P N++V++ + ++W+ + + Y R K A
Sbjct: 16527 -AFVTVRVLDTPSPPVNLKVTEITKDSVSITWEPPLLDGGSKIKNYIVEKREATRKSYAA 16585
Query: 284 TTNTSYVDKIEKDNL----TRYYKVVALDKTHLEGALPKEPAMG-ETADRPEAP-IITKG 337
+ + + D L + Y++V A ++ + LP + A + A+ P+ P IT
Sbjct: 16586 VVTNCHKNSWKIDQLQEGCSYYFRVTAENEYGI--GLPAQTADPIKVAEVPQPPGKITVD 16643
Query: 338 TIQDSSALIQW---ENNPSAKIATYAVYRFEANSKTPLRFGNITKNQFVDKDMKVGVAYR 394
+ +S + W E++ +KI Y V +S+ + Q V ++ G Y
Sbjct: 16644 DVTRNSVSLSWTKPEHDGGSKIIQYIVEMQAKHSEKWSECARVKSLQAVITNLTQGEEYL 16703
Query: 395 YQVVSVDKDG 404
++VV+V++ G
Sbjct: 16704 FRVVAVNEKG 16713
>ref|NP_597676.1| (NM_133432) titin, isoform novex-1; connectin; CMH9, included [Homo
sapiens]
Length = 27051
Score = 43.1 bits (100), Expect = 0.006
Identities = 53/250 (21%), Positives = 105/250 (41%), Gaps = 18/250 (7%)
Query: 164 PNPSVSKYIIQRQNKDGKFLNVGAVRNRLFVEFFDKDLEDGKKYRYQVIAENFMGDKSRP 223
P P V + + +D ++V + L ++ ++ + GK Y + EN G KS
Sbjct: 16598 PTPEVKWGKVDGEIRDAAIIDVTSSFTSLVLDNVNR-YDSGK---YTLTLENSSGTKS-- 16651
Query: 224 SVIVEGKTKDLPKEITNVRVSQNLTRHIELSWDKSTQEDVIAYRIYASNNRNDKYKFIAQ 283
V + D P N++V++ + ++W+ + + Y R K A
Sbjct: 16652 -AFVTVRVLDTPSPPVNLKVTEITKDSVSITWEPPLLDGGSKIKNYIVEKREATRKSYAA 16710
Query: 284 TTNTSYVDKIEKDNL----TRYYKVVALDKTHLEGALPKEPAMG-ETADRPEAP-IITKG 337
+ + + D L + Y++V A ++ + LP + A + A+ P+ P IT
Sbjct: 16711 VVTNCHKNSWKIDQLQEGCSYYFRVTAENEYGI--GLPAQTADPIKVAEVPQPPGKITVD 16768
Query: 338 TIQDSSALIQW---ENNPSAKIATYAVYRFEANSKTPLRFGNITKNQFVDKDMKVGVAYR 394
+ +S + W E++ +KI Y V +S+ + Q V ++ G Y
Sbjct: 16769 DVTRNSVSLSWTKPEHDGGSKIIQYIVEMQAKHSEKWSECARVKSLQAVITNLTQGEEYL 16828
Query: 395 YQVVSVDKDG 404
++VV+V++ G
Sbjct: 16829 FRVVAVNEKG 16838
>emb|CAD12456.1| (AJ277892) Titin [Homo sapiens]
Length = 34350
Score = 43.1 bits (100), Expect = 0.006
Identities = 53/250 (21%), Positives = 105/250 (41%), Gaps = 18/250 (7%)
Query: 164 PNPSVSKYIIQRQNKDGKFLNVGAVRNRLFVEFFDKDLEDGKKYRYQVIAENFMGDKSRP 223
P P V + + +D ++V + L ++ ++ + GK Y + EN G KS
Sbjct: 23897 PTPEVKWGKVDGEIRDAAIIDVTSSFTSLVLDNVNR-YDSGK---YTLTLENSSGTKS-- 23950
Query: 224 SVIVEGKTKDLPKEITNVRVSQNLTRHIELSWDKSTQEDVIAYRIYASNNRNDKYKFIAQ 283
V + D P N++V++ + ++W+ + + Y R K A
Sbjct: 23951 -AFVTVRVLDTPSPPVNLKVTEITKDSVSITWEPPLLDGGSKIKNYIVEKREATRKSYAA 24009
Query: 284 TTNTSYVDKIEKDNL----TRYYKVVALDKTHLEGALPKEPAMG-ETADRPEAP-IITKG 337
+ + + D L + Y++V A ++ + LP + A + A+ P+ P IT
Sbjct: 24010 VVTNCHKNSWKIDQLQEGCSYYFRVTAENEYGI--GLPAQTADPIKVAEVPQPPGKITVD 24067
Query: 338 TIQDSSALIQW---ENNPSAKIATYAVYRFEANSKTPLRFGNITKNQFVDKDMKVGVAYR 394
+ +S + W E++ +KI Y V +S+ + Q V ++ G Y
Sbjct: 24068 DVTRNSVSLSWTKPEHDGGSKIIQYIVEMQAKHSEKWSECARVKSLQAVITNLTQGEEYL 24127
Query: 395 YQVVSVDKDG 404
++VV+V++ G
Sbjct: 24128 FRVVAVNEKG 24137
Database: /home/scwang/download_20020708_db/nr
Posted date: Aug 7, 2002 12:55 PM
Number of letters in database: 324,149,939
Number of sequences in database: 1,026,957
Lambda K H
0.315 0.133 0.379
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 266,946,336
Number of Sequences: 1026957
Number of extensions: 11401211
Number of successful extensions: 29559
Number of sequences better than 1.0e-02: 37
Number of HSP's better than 0.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 34
Number of HSP's that attempted gapping in prelim test: 29437
Number of HSP's gapped (non-prelim): 406
length of query: 419
length of database: 324,149,939
effective HSP length: 124
effective length of query: 295
effective length of database: 196,807,271
effective search space: 58058144945
effective search space used: 58058144945
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 99 (42.7 bits)