BLASTP 2.2.1 [Apr-13-2001]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|15645366|ref|NP_207540.1| conserved hypothetical
protein [Helicobacter pylori 26695]
(393 letters)
Database: /home/scwang/download_20020708_db/nr
1,026,957 sequences; 324,149,939 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_207540.1| (NC_000915) conserved hypothetical protein... 795 0.0
ref|NP_223402.1| (NC_000921) putative [Helicobacter pylori ... 727 0.0
ref|NP_282425.1| (NC_002163) ypothetical protein Cj1278c [C... 211 2e-53
ref|NP_228733.1| (NC_000853) conserved hypothetical protein... 98 2e-19
ref|NP_438504.1| (NC_000907) conserved hypothetical protein... 92 8e-18
ref|NP_660863.1| (NC_004061) hypothetical 27.3 kD protein i... 92 1e-17
ref|NP_246255.1| (NC_002663) unknown [Pasteurella multocida... 91 2e-17
ref|NP_240357.1| (NC_002528) hypothetical protein [Buchnera... 91 2e-17
ref|NP_457502.1| (NC_003198) conserved hypothetical protein... 88 2e-16
ref|NP_404567.1| (NC_003143) Putative methyltransferase [Ye... 87 3e-16
ref|NP_418869.1| (NC_002696) conserved hypothetical protein... 87 4e-16
ref|NP_462025.1| (NC_003197) putative S-adenosylmethionine-... 85 1e-15
ref|NP_213039.1| (NC_000918) hypothetical protein [Aquifex ... 84 2e-15
ref|NP_284257.1| (NC_003116) conserved hypothetical protein... 83 6e-15
ref|NP_221195.1| (NC_000963) POSSIBLE PROTOPORPHYRINOGEN OX... 82 1e-14
ref|NP_274347.1| (NC_003112) conserved hypothetical protein... 82 1e-14
ref|NP_602422.1| (NC_003454) 3-deoxy-D-manno-octulosonic-ac... 82 1e-14
pir||A38535 hypothetical protein (MicA region) - Escherichi... 81 2e-14
gb|AAA72956.1| (M59471) [micA] gene products [Escherichia c... 81 2e-14
ref|NP_417435.1| (NC_000913) orf, hypothetical protein [Esc... 81 2e-14
ref|NP_289532.1| (NC_002655) orf, hypothetical protein [Esc... 80 4e-14
ref|NP_360951.1| (NC_003103) possible protoporphyrinogen ox... 79 7e-14
ref|NP_230107.1| (NC_002505) conserved hypothetical protein... 79 9e-14
ref|NP_325997.1| (NC_002771) conserved hypothetical protein... 78 2e-13
ref|NP_249073.1| (NC_002516) DNA mismatch repair protein Mi... 77 5e-13
sp|Q9I6B3|MT04_PSEAE Hypothetical methyltransferase PA0382 77 5e-13
ref|NP_384518.1| (NC_003047) CONSERVED HYPOTHETICAL PROTEIN... 76 8e-13
sp|Q9F411|MT04_MYCHO Hypothetical methyltransferase MG347 h... 75 2e-12
ref|NP_244127.1| (NC_002570) BH3261~unknown conserved prote... 74 2e-12
ref|NP_390868.1| (NC_000964) similar to hypothetical protei... 74 4e-12
ref|NP_073017.1| (NC_000908) conserved hypothetical protein... 74 4e-12
ref|NP_518824.1| (NC_003295) CONSERVED HYPOTHETICAL PROTEIN... 72 1e-11
ref|NP_110210.1| (NC_000912) similar to methyltransferase [... 72 1e-11
ref|NP_470992.1| (NC_003212) similar to unknown proteins [L... 72 1e-11
ref|NP_658728.1| (NC_003995) Methyltransf_4, Putative methy... 71 2e-11
ref|NP_465140.1| (NC_003210) similar to unknown proteins [L... 71 2e-11
ref|NP_345067.1| (NC_003028) conserved hypothetical protein... 70 4e-11
ref|NP_628290.1| (NC_003888) conserved hypothetical protein... 70 4e-11
ref|NP_353395.1| (NC_003062) AGR_C_634p [Agrobacterium tume... 69 7e-11
ref|NP_607764.1| (NC_003485) putative methyltransferase [St... 69 7e-11
ref|NP_269750.1| (NC_002737) conserved hypothetical protein... 69 7e-11
ref|NP_266905.1| (NC_002662) HYPOTHETICAL PROTEIN [Lactococ... 69 9e-11
ref|NP_218905.1| (NC_000919) conserved hypothetical protein... 69 9e-11
ref|NP_638497.1| (NC_003902) DNA mismatch repair protein [X... 68 2e-10
ref|NP_349234.1| (NC_003030) Predicted S-adenosylmethionine... 66 8e-10
ref|NP_643610.1| (NC_003919) DNA mismatch repair protein [X... 65 1e-09
ref|NP_078103.1| (NC_002162) conserved hypothetical [Ureapl... 65 1e-09
ref|NP_295403.1| (NC_001263) conserved hypothetical protein... 64 2e-09
ref|NP_106193.1| (NC_002678) hypothetical protein [Mesorhiz... 63 5e-09
ref|NP_602057.1| (NC_003450) COG0220:Predicted S-adenosylme... 63 7e-09
ref|NP_298074.1| (NC_002488) conserved hypothetical protein... 62 9e-09
ref|NP_540886.1| (NC_003317) SAM-DEPENDENT METHYLTRANSFERAS... 61 3e-08
sp|P73161|MT04_SYNY3 Hypothetical methyltransferase sll1300 60 3e-08
ref|NP_646508.1| (NC_003923) conserved hypothetical protein... 60 3e-08
ref|NP_440507.1| (NC_000911) hypothetical protein [Synechoc... 60 3e-08
sp|Q9KWZ4|MT04_STAAU Hypothetical methyltransferase >gi|732... 60 4e-08
ref|NP_372272.1| (NC_002758) conserved hypothetical protein... 60 4e-08
ref|NP_296595.1| (NC_002620) conserved hypothetical protein... 56 8e-07
ref|NP_485885.1| (NC_003272) hypothetical protein [Nostoc s... 55 1e-06
dbj|BAB09565.1| (AB006706) gb|AAB08476.1~gene_id:MVA3.1~sim... 55 2e-06
ref|NP_568355.1| (NM_121772) putative protein [Arabidopsis ... 55 2e-06
ref|NP_214722.1| (NC_000962) hypothetical protein Rv0208c [... 54 2e-06
ref|NP_220350.1| (NC_000117) rRNA Methylase (possible) [Chl... 54 3e-06
sp|O84836|MT04_CHLTR Hypothetical methyltransferase CT829 54 3e-06
sp|P72546|MT04_SYNP7 Hypothetical methyltransferase DC13 >g... 54 3e-06
ref|NP_225180.1| (NC_000922) predicted rRNA Methylase [Chla... 54 3e-06
ref|NP_561340.1| (NC_003366) conserved hypothetical protein... 53 7e-06
ref|NP_302680.1| (NC_002677) conserved hypothetical protein... 51 2e-05
emb|CAB08804.1| (Z95398) unknown [Mycobacterium leprae] 51 2e-05
ref|NP_586458.1| (NC_003237) similarity to HYPOTHETICAL MET... 50 3e-05
ref|NP_633973.1| (NC_003901) methyltransferase [Methanosarc... 48 2e-04
ref|NP_521916.1| (NC_003296) HYPOTHETICAL PROTEIN [Ralstoni... 45 0.001
gb|EAA13331.1| (AAAB01008968) ebiP3460 [Anopheles gambiae s... 45 0.001
>ref|NP_207540.1| (NC_000915) conserved hypothetical protein [Helicobacter pylori
26695]
sp|O25443|MT04_HELPY Hypothetical methyltransferase HP0747
pir||C64613 conserved hypothetical protein HP0747 - Helicobacter pylori
(strain 26695)
gb|AAD07796.1| (AE000587) conserved hypothetical protein [Helicobacter pylori
26695]
Length = 393
Score = 795 bits (2053), Expect = 0.0
Identities = 393/393 (100%), Positives = 393/393 (100%)
Query: 1 MPHFLAKLDFKPLEYPLIEGDFCFHREFLSLKNPTKSCVYASFKDRIFLLQKIRRANDFL 60
MPHFLAKLDFKPLEYPLIEGDFCFHREFLSLKNPTKSCVYASFKDRIFLLQKIRRANDFL
Sbjct: 1 MPHFLAKLDFKPLEYPLIEGDFCFHREFLSLKNPTKSCVYASFKDRIFLLQKIRRANDFL 60
Query: 61 IKSEKATPLKREVLKQALRIYSQSFEVISHNLQENSKHASGKKTLDLGTFEDFIQKNQAP 120
IKSEKATPLKREVLKQALRIYSQSFEVISHNLQENSKHASGKKTLDLGTFEDFIQKNQAP
Sbjct: 61 IKSEKATPLKREVLKQALRIYSQSFEVISHNLQENSKHASGKKTLDLGTFEDFIQKNQAP 120
Query: 121 ILIEIGFGSGRHLIELAKNNPTKTCLGIEIHTPSIAQALKQIELLDLKNLHILQGDGRLV 180
ILIEIGFGSGRHLIELAKNNPTKTCLGIEIHTPSIAQALKQIELLDLKNLHILQGDGRLV
Sbjct: 121 ILIEIGFGSGRHLIELAKNNPTKTCLGIEIHTPSIAQALKQIELLDLKNLHILQGDGRLV 180
Query: 181 LESMPNHRCEKIFVHFPVPWNEKKHRRVLSEKFLNEALRVLKPRGFLELRTDDSLYFEDS 240
LESMPNHRCEKIFVHFPVPWNEKKHRRVLSEKFLNEALRVLKPRGFLELRTDDSLYFEDS
Sbjct: 181 LESMPNHRCEKIFVHFPVPWNEKKHRRVLSEKFLNEALRVLKPRGFLELRTDDSLYFEDS 240
Query: 241 LKLALKNFQCEIEIKKNAQIPVVSKYEARWNKLKKDIYDLRIYSLEWNETPFDNHAFDFS 300
LKLALKNFQCEIEIKKNAQIPVVSKYEARWNKLKKDIYDLRIYSLEWNETPFDNHAFDFS
Sbjct: 241 LKLALKNFQCEIEIKKNAQIPVVSKYEARWNKLKKDIYDLRIYSLEWNETPFDNHAFDFS 300
Query: 301 FDTITISKKSVGTILKTKKIIQEGYFVHVCNIYENKGDFLVELSMGDFDWPVRLFVLLTE 360
FDTITISKKSVGTILKTKKIIQEGYFVHVCNIYENKGDFLVELSMGDFDWPVRLFVLLTE
Sbjct: 301 FDTITISKKSVGTILKTKKIIQEGYFVHVCNIYENKGDFLVELSMGDFDWPVRLFVLLTE 360
Query: 361 NQIFYLNKSPLKTLNNHKAHLLLQNILSQKGIG 393
NQIFYLNKSPLKTLNNHKAHLLLQNILSQKGIG
Sbjct: 361 NQIFYLNKSPLKTLNNHKAHLLLQNILSQKGIG 393
>ref|NP_223402.1| (NC_000921) putative [Helicobacter pylori J99]
sp|Q9ZL96|MT04_HELPJ Hypothetical methyltransferase JHP0684
pir||D71900 hypothetical protein jhp0684 - Helicobacter pylori (strain J99)
gb|AAD06272.1| (AE001500) putative [Helicobacter pylori J99]
Length = 400
Score = 727 bits (1876), Expect = 0.0
Identities = 361/390 (92%), Positives = 371/390 (94%)
Query: 1 MPHFLAKLDFKPLEYPLIEGDFCFHREFLSLKNPTKSCVYASFKDRIFLLQKIRRANDFL 60
MPHFLAKLD KPLEYPLI GDFCFHREFLSLK+PTKSCV+ASFK+ +FLLQKIRRA DFL
Sbjct: 1 MPHFLAKLDSKPLEYPLIRGDFCFHREFLSLKHPTKSCVHASFKNDVFLLQKIRRAGDFL 60
Query: 61 IKSEKATPLKREVLKQALRIYSQSFEVISHNLQENSKHASGKKTLDLGTFEDFIQKNQAP 120
IKSEKATPLKRE+LKQALRIYSQSFEVISHNLQENSKHAS KK LDL TFEDFIQKNQAP
Sbjct: 61 IKSEKATPLKREILKQALRIYSQSFEVISHNLQENSKHASQKKALDLETFEDFIQKNQAP 120
Query: 121 ILIEIGFGSGRHLIELAKNNPTKTCLGIEIHTPSIAQALKQIELLDLKNLHILQGDGRLV 180
ILIEIGFGSGRHLIELAKNNPT TCLGIEIHTPSIAQALKQIELLDLKNLHILQGDGRLV
Sbjct: 121 ILIEIGFGSGRHLIELAKNNPTTTCLGIEIHTPSIAQALKQIELLDLKNLHILQGDGRLV 180
Query: 181 LESMPNHRCEKIFVHFPVPWNEKKHRRVLSEKFLNEALRVLKPRGFLELRTDDSLYFEDS 240
LESMPNHRCEKIFVHFPVPWNEKKHRRVLSEKFLNEALRVLKPRGFLELRTDDSL FEDS
Sbjct: 181 LESMPNHRCEKIFVHFPVPWNEKKHRRVLSEKFLNEALRVLKPRGFLELRTDDSLCFEDS 240
Query: 241 LKLALKNFQCEIEIKKNAQIPVVSKYEARWNKLKKDIYDLRIYSLEWNETPFDNHAFDFS 300
LKLALKNFQCEIEIKKNAQIPVVSKYEARWNKLKKDIYDL+IYSL +E P NHA DFS
Sbjct: 241 LKLALKNFQCEIEIKKNAQIPVVSKYEARWNKLKKDIYDLKIYSLGLDENPTQNHALDFS 300
Query: 301 FDTITISKKSVGTILKTKKIIQEGYFVHVCNIYENKGDFLVELSMGDFDWPVRLFVLLTE 360
FDTITI K+SVG ILKT KII+EGYFVHVCNIYENKGDFLVELSMGDFDWPVRLFVLL E
Sbjct: 301 FDTITIDKESVGAILKTPKIIKEGYFVHVCNIYENKGDFLVELSMGDFDWPVRLFVLLAE 360
Query: 361 NQIFYLNKSPLKTLNNHKAHLLLQNILSQK 390
NQ+FYLNKSPLKTLNNHKAHLLLQNILSQK
Sbjct: 361 NQVFYLNKSPLKTLNNHKAHLLLQNILSQK 390
>ref|NP_282425.1| (NC_002163) ypothetical protein Cj1278c [Campylobacter jejuni]
sp|Q9PN20|MT04_CAMJE Hypothetical methyltransferase CJ1278c
pir||H81335 hypothetical protein Cj1278c [imported] - Campylobacter jejuni
(strain NCTC 11168)
emb|CAB73532.1| (AL139077) ypothetical protein Cj1278c [Campylobacter jejuni]
Length = 392
Score = 211 bits (536), Expect = 2e-53
Identities = 134/394 (34%), Positives = 215/394 (54%), Gaps = 15/394 (3%)
Query: 1 MPHFLAKLDFKPLEYPLIEGDFCFHREFLSL-KNPTKSCVYASFKDRIFLLQKIRRANDF 59
MP+F +K K + P + D EFL L KN S +Y ++ F LQ + N F
Sbjct: 1 MPNFKSK-KIKEINLPYSKDDV----EFLWLAKNDNVSLIYTKVQEESFFLQIKKAQNGF 55
Query: 60 LIKSEKAT-PLKREVLKQALRIYSQSF--EVISHNLQENSKHASGKKTLDLGTFEDFIQK 116
+IK +K T P K L++AL+I+ + F ++I+ + K + F++ + +
Sbjct: 56 VIKGDKHTKPSKIGYLQKALKIFKEGFCEDIINEAFGLKNNALIEKTPFIVDNFDELLSR 115
Query: 117 NQAPILIEIGFGSGRHLIELAKNNPTKTCLGIEIHTPSIAQALKQIELLDLKNLHILQGD 176
Q I IEIGFGSGRHL+ AK NP LG+EI+ P++ Q K + ++ N+ ++Q D
Sbjct: 116 LQGKIYIEIGFGSGRHLLYQAKENPNVLILGVEIYNPALTQVAKLAKAQNVNNILLIQSD 175
Query: 177 GRLVLESMPNHRCEKIFVHFPVPWNEKKHRRVLSEKFLNEALRVLKPRGFLELRTDDSLY 236
RL+L + + EKIF+HFPVPW++K HRRV+ + F E RVL G ELRTD Y
Sbjct: 176 ARLLLSVLKSKSVEKIFLHFPVPWDKKPHRRVIGKDFCKECARVLVQNGRFELRTDSFEY 235
Query: 237 FEDSLKLALKNFQCEIEIKKNAQIPVVSKYEARWNKLKKDIYDLRIYSLEWNETPFDNHA 296
F +L+ L + ++KN + + SKYE RW K +K+IYDL +++ +N+ +
Sbjct: 236 FNFTLEQFLTFPAPKFSLRKNENLEISSKYEDRWKKQEKNIYDLWVWN--FNQECKNYEL 293
Query: 297 FDFSFDTITISKKSVGTI---LKTKKIIQEGYFVHVCNIYENKGDFLVELSMGDFDWPVR 353
+F+ ++ SK+ + I K I ++ +F+H +IY+ + L++++ G F+ P
Sbjct: 294 NEFNLSSVEFSKEDLKKIEQNFKNITIKKDDFFLHFESIYKQDENLLLKVAFGAFNKPEH 353
Query: 354 LFVLLTENQIFYLNKSPLKTLNNHKAHLLLQNIL 387
++ L + I + K P K N KA L+ IL
Sbjct: 354 CYLHL-DKTIDFAFKEPFKIQENIKAINELKEIL 386
>ref|NP_228733.1| (NC_000853) conserved hypothetical protein [Thermotoga maritima]
sp|Q9X027|MT04_THEMA Hypothetical methyltransferase TM0925
pir||F72317 conserved hypothetical protein - Thermotoga maritima (strain MSB8)
gb|AAD36006.1|AE001756_9 (AE001756) conserved hypothetical protein [Thermotoga maritima]
Length = 313
Score = 97.8 bits (242), Expect = 2e-19
Identities = 54/165 (32%), Positives = 94/165 (56%), Gaps = 4/165 (2%)
Query: 118 QAPILIEIGFGSGRHLIELAKNNPTKTCLGIEIHTPSIAQALKQIELLDLKNLHILQGDG 177
+A I++EIGFG+G L ELA+ +P K +G E+ S +A K+ + +LKN+ +++ D
Sbjct: 27 KAKIVVEIGFGNGEFLAELARRHPEKDFVGFEVSITSFVKAQKKFKRYNLKNVRLVKVDA 86
Query: 178 RLVL-ESMPNHRCEKIFVHFPVPWNEKKH--RRVLSEKFLNEALRVLKPRGFLELRTDDS 234
R L E P++ EK++++FP PW +K+H RR+ S FL VL+ G +E TD+
Sbjct: 87 RFGLRELFPDNSVEKVYINFPCPWPKKRHESRRITSYDFLQTLSAVLEMDGTVEFATDEE 146
Query: 235 LYFEDSLKLALKNFQCEIEI-KKNAQIPVVSKYEARWNKLKKDIY 278
Y + L + +++ ++N + V ++YE +W K +
Sbjct: 147 WYAREVLDTFESSEYFVVDVFEENFKRDVETRYERKWKSQGKKTF 191
>ref|NP_438504.1| (NC_000907) conserved hypothetical protein [Haemophilus influenzae
Rd]
sp|P44648|MT04_HAEIN Probable methyltransferase HI0340
pir||F64148 hypothetical protein HI0340 - Haemophilus influenzae (strain Rd
KW20)
gb|AAC22002.1| (U32719) conserved hypothetical protein [Haemophilus influenzae Rd]
Length = 246
Score = 92.4 bits (228), Expect = 8e-18
Identities = 55/175 (31%), Positives = 91/175 (51%), Gaps = 8/175 (4%)
Query: 114 IQKNQAPILIEIGFGSGRHLIELAKNNPTKTCLGIEIHTPSIAQALKQIELLDLKNLHIL 173
I N P+++EIGFG G+ L+++A NP K LGIE+HTP + + + NL ++
Sbjct: 67 IYGNDNPVVLEIGFGMGKSLVDMAFANPDKNYLGIEVHTPGVGACIAYAVEKGVTNLRVI 126
Query: 174 QGDGRLVL-ESMPNHRCEKIFVHFPVPWNEKKH--RRVLSEKFLNEALRVLKPRGFLELR 230
D +L +S+ + + + FP PW++ KH RR++ F+ + ++ L GF+ +
Sbjct: 127 CHDATEILRDSIADGALGGLQLFFPDPWHKAKHHKRRIVQPHFVTQVIQKLGENGFIHMA 186
Query: 231 TDDSLYFEDSLKLALKNFQCEIEIKKNAQIP-----VVSKYEARWNKLKKDIYDL 280
TD Y E L++ N K IP ++K+EAR KL ++DL
Sbjct: 187 TDWENYAEQMLEVLSANTDLVNTSKNGDYIPRPDFRPLTKFEARGYKLGHGVWDL 241
>ref|NP_660863.1| (NC_004061) hypothetical 27.3 kD protein in ansB-mutY [Buchnera
aphidicola str. Sg (Schizaphis graminum)]
gb|AAM68074.1| (AE014127) hypothetical 27.3 kD protein in ansB-mutY [Buchnera
aphidicola str. Sg (Schizaphis graminum)]
Length = 239
Score = 91.7 bits (226), Expect = 1e-17
Identities = 58/163 (35%), Positives = 84/163 (50%), Gaps = 4/163 (2%)
Query: 116 KNQAPILIEIGFGSGRHLIELAKNNPTKTCLGIEIHTPSIAQALKQIELLDLKNLHILQG 175
KN AP+++EIGFGSG L++ A N P K LGIE++ I L+ + NL I+
Sbjct: 61 KNSAPVILEIGFGSGESLVKTAANFPNKNFLGIEVYKSGIGSCLRLAHYSGINNLKIIYH 120
Query: 176 DGRLVLESM-PNHRCEKIFVHFPVPWNEKKH--RRVLSEKFLNEALRVLKPRGFLELRTD 232
D V++ M +H K+ + FP PWN+K+H RR++ + FL + L+ L G L + TD
Sbjct: 121 DAIEVIDQMILDHTLSKVQIFFPDPWNKKRHHKRRMIQDFFLIKILKKLNNDGILHIVTD 180
Query: 233 DSLYFEDSLKLALKNFQCEIEIKKNAQIPVVSKYEARWNKLKK 275
Y L L ++N I + K KY N KK
Sbjct: 181 SKEYNFFILNL-IQNIDNYINLSKKRMCFEHFKYRLVTNFEKK 222
>ref|NP_246255.1| (NC_002663) unknown [Pasteurella multocida]
sp|Q9CLC2|MT04_PASMU Hypothetical methyltransferase PM1317
gb|AAK03401.1| (AE006170) unknown [Pasteurella multocida]
Length = 255
Score = 91.3 bits (225), Expect = 2e-17
Identities = 53/175 (30%), Positives = 90/175 (51%), Gaps = 8/175 (4%)
Query: 114 IQKNQAPILIEIGFGSGRHLIELAKNNPTKTCLGIEIHTPSIAQALKQIELLDLKNLHIL 173
I N P+++EIGFG G L+++A NP + LGIE+HTP + + +KNL I+
Sbjct: 76 IYGNNNPVVLEIGFGMGHSLVDMALQNPERNYLGIEVHTPGVGACIAYAVEKGVKNLRII 135
Query: 174 QGDGRLVL-ESMPNHRCEKIFVHFPVPWNEKKH--RRVLSEKFLNEALRVLKPRGFLELR 230
D +L + + +H + + FP PW++ KH RR++ +F+N + L GF+ +
Sbjct: 136 CHDATEILRDCIADHSLGGLQLFFPDPWHKAKHHKRRIVQPQFVNTITQKLTTGGFIHMA 195
Query: 231 TDDSLYFEDSLKL-----ALKNFQCEIEIKKNAQIPVVSKYEARWNKLKKDIYDL 280
TD Y E L + L+N + ++K+E R ++L ++DL
Sbjct: 196 TDWENYAEHMLAVLQQAEGLQNTSATHDYIPRPDFRPLTKFEQRGHRLGHGVWDL 250
>ref|NP_240357.1| (NC_002528) hypothetical protein [Buchnera sp. APS]
sp|P57616|MT04_BUCAI Hypothetical methyltransferase BU551
dbj|BAB13243.1| (AP001119) hypothetical protein [Buchnera sp. APS]
Length = 239
Score = 90.9 bits (224), Expect = 2e-17
Identities = 61/176 (34%), Positives = 94/176 (52%), Gaps = 10/176 (5%)
Query: 114 IQKNQAPILIEIGFGSGRHLIELAKNNPTKTCLGIEIHTPSIAQALKQIELLDLKNLHIL 173
I K++API++EIGFGSG L++ A N P K LGIE++ I L ++NL I+
Sbjct: 59 IFKHRAPIILEIGFGSGESLVKTAMNFPEKNFLGIEVYKSGIGSCLHYASSYQIQNLRII 118
Query: 174 QGDGRLVLESM-PNHRCEKIFVHFPVPWNEKKH--RRVLSEKFLNEALRVLKPRGFLELR 230
D V+ +M P+ K+ + FP PW++K+H RR+L FL + L G L +
Sbjct: 119 YYDATEVMYNMIPDDTLSKVQIFFPDPWHKKRHHKRRLLKNIFLKIITKKLIIDGILHIA 178
Query: 231 TDD---SLYFEDSLKLALKNFQCEIEIKKNAQIPV---VSKYEARWNKLKKDIYDL 280
TD + Y D +K +KN++ E + PV ++K+E + K I+DL
Sbjct: 179 TDSESYAFYILDEIK-DIKNYKNLSEKNNFVKRPVSRIITKFEKKGLLQGKKIFDL 233
>ref|NP_457502.1| (NC_003198) conserved hypothetical protein [Salmonella enterica
subsp. enterica serovar Typhi]
emb|CAD02934.1| (AL627277) conserved hypothetical protein [Salmonella enterica
subsp. enterica serovar Typhi]
Length = 239
Score = 88.2 bits (217), Expect = 2e-16
Identities = 53/171 (30%), Positives = 86/171 (49%), Gaps = 8/171 (4%)
Query: 118 QAPILIEIGFGSGRHLIELAKNNPTKTCLGIEIHTPSIAQALKQIELLDLKNLHILQGDG 177
+AP+ +EIGFG G L+ +AK P + LGIE+H+P + L ++NLH++ D
Sbjct: 63 EAPVTLEIGFGMGASLVAMAKARPEQNFLGIEVHSPGVGACLASAHEEGVENLHVMCHDA 122
Query: 178 RLVLESM-PNHRCEKIFVHFPVPWNEKKH--RRVLSEKFLNEALRVLKPRGFLELRTDDS 234
VL M P++ + + FP PW++ +H RR++ F L LK G + TD
Sbjct: 123 VEVLHKMIPDNSLSMVQLFFPDPWHKARHNKRRIVQVPFAELVLSKLKLGGVFHMATDWE 182
Query: 235 LYFEDSLKL-----ALKNFQCEIEIKKNAQIPVVSKYEARWNKLKKDIYDL 280
Y E L++ KN + + V+K+E R ++L ++DL
Sbjct: 183 AYAEHMLEVMSSIDGYKNLSESNDYVPRPESRPVTKFEQRGHRLGHGVWDL 233
>ref|NP_404567.1| (NC_003143) Putative methyltransferase [Yersinia pestis]
emb|CAC89794.1| (AJ414145) Putative methyltransferase [Yersinia pestis]
Length = 239
Score = 87.0 bits (214), Expect = 3e-16
Identities = 54/171 (31%), Positives = 85/171 (49%), Gaps = 8/171 (4%)
Query: 118 QAPILIEIGFGSGRHLIELAKNNPTKTCLGIEIHTPSIAQALKQIELLDLKNLHILQGDG 177
+API++EIGFG G L+ +A NNP + LGIE+H+P + L L NL I+ D
Sbjct: 63 EAPIVLEIGFGMGTSLVTMATNNPQQNFLGIEVHSPGVGACLSSAHDAGLSNLRIMCHDA 122
Query: 178 RLVLESM-PNHRCEKIFVHFPVPWNEKKH--RRVLSEKFLNEALRVLKPRGFLELRTDDS 234
VLE+M P + + + FP PW++ +H RR++ F+ LK G + TD
Sbjct: 123 VEVLENMIPEASLDMVQLFFPDPWHKARHNKRRIVQTPFVELVKSKLKVGGVFHMATDWQ 182
Query: 235 LYFEDSLKL-----ALKNFQCEIEIKKNAQIPVVSKYEARWNKLKKDIYDL 280
Y E L++ N + + ++K+E R +L ++DL
Sbjct: 183 PYAEHMLEVMSGVSGYLNLSEQNDYVPRPDSRPLTKFELRGQRLGHGVWDL 233
>ref|NP_418869.1| (NC_002696) conserved hypothetical protein [Caulobacter crescentus
CB15]
sp|P58088|MT04_CAUCR Hypothetical methyltransferase CC0049
gb|AAK22037.1| (AE005679) conserved hypothetical protein [Caulobacter crescentus
CB15]
Length = 271
Score = 86.7 bits (213), Expect = 4e-16
Identities = 51/156 (32%), Positives = 86/156 (54%), Gaps = 7/156 (4%)
Query: 121 ILIEIGFGSGRHLIELAKNNPTKTCLGIEIHTPSIAQALKQIELLDLKNLHILQGDGRLV 180
+ +EIGFG G H+ A NP +G E +A A++ +E LKN+ I +GD R V
Sbjct: 101 VWLEIGFGGGEHMASQAGRNPETLVIGAEPFVNGVASAVRHVEEQALKNVRIHEGDARDV 160
Query: 181 LESMPNHRCEKIFVHFPVPWNEKKH--RRVLSEKFLNEALRVLKPRGFLELRTDDSLYFE 238
++ +P+ +++F+ FP PW++ +H RR++ +F+ + RV+KP L TD + Y E
Sbjct: 161 VDWLPDACLDRVFIMFPDPWHKARHNKRRLIQPEFVAKLARVMKPGAALRFATDWADYAE 220
Query: 239 DSLK--LALKNFQCEIEIKKNAQIP---VVSKYEAR 269
+ + LA +F+ E IP V ++YE +
Sbjct: 221 WTTERVLADPSFRFADEAADRNAIPADHVTTRYEEK 256
>ref|NP_462025.1| (NC_003197) putative S-adenosylmethionine-dependent
methyltransferase [Salmonella typhimurium LT2]
gb|AAL21984.1| (AE008842) putative S-adenosylmethionine-dependent
methyltransferase [Salmonella typhimurium LT2]
Length = 239
Score = 85.1 bits (209), Expect = 1e-15
Identities = 52/171 (30%), Positives = 85/171 (49%), Gaps = 8/171 (4%)
Query: 118 QAPILIEIGFGSGRHLIELAKNNPTKTCLGIEIHTPSIAQALKQIELLDLKNLHILQGDG 177
+AP+ +EIGFG G L+ +AK P + LGIE+H+P + L ++NL ++ D
Sbjct: 63 EAPVTLEIGFGMGASLVAMAKARPEQNFLGIEVHSPGVGACLASANEEGVENLRVMCHDA 122
Query: 178 RLVLESM-PNHRCEKIFVHFPVPWNEKKH--RRVLSEKFLNEALRVLKPRGFLELRTDDS 234
VL M P++ + + FP PW++ +H RR++ F L LK G + TD
Sbjct: 123 VEVLHKMIPDNSLSMVQLFFPDPWHKARHNKRRIVQVPFAELVLSKLKLGGVFHMATDWE 182
Query: 235 LYFEDSLKL-----ALKNFQCEIEIKKNAQIPVVSKYEARWNKLKKDIYDL 280
Y E L++ KN + + V+K+E R ++L ++DL
Sbjct: 183 AYAEHMLEVMSSIDGYKNLSESNDYVPRPESRPVTKFEQRGHRLGHGVWDL 233
>ref|NP_213039.1| (NC_000918) hypothetical protein [Aquifex aeolicus]
sp|O66479|MT04_AQUAE Hypothetical methyltransferase AQ_065
pir||D70306 conserved hypothetical protein aq_065 - Aquifex aeolicus
gb|AAC06452.1| (AE000672) hypothetical protein [Aquifex aeolicus]
Length = 297
Score = 84.3 bits (207), Expect = 2e-15
Identities = 77/284 (27%), Positives = 139/284 (48%), Gaps = 25/284 (8%)
Query: 123 IEIGFGSGRHLIELAKNNPTKTCLGIEIHTPSIAQALKQIELLDLKNLHILQGDGRLVLE 182
+EIGFG G +++LAK NP K GIEI SI + +K++ LKN++ D
Sbjct: 21 VEIGFGRGDFIVKLAKENPDKNFFGIEISQISIEKLMKRVGKKGLKNVYCTNVDAYWGFY 80
Query: 183 SM-PNHRCEKIFVHFPVPWNEKKH--RRVLSEKFLNEALRVLKPRGFLELRTDDSLYFED 239
+ ++ E I++++P PW +K+H RR+ + L + LK G + +RTD+ + E
Sbjct: 81 FLFRDNYVENIYMNYPDPWFKKRHHKRRLTKPERLYMFAKKLKLGGEIRIRTDNYEFLEF 140
Query: 240 SLKLA--LKNFQCEIEIKKNAQIPVVSKYEARWNKLKKDIYDLRIYSLEWNETPFDNH-- 295
+ + A L F+ E E N + P ++KYE +W + K +Y L + ++ E F H
Sbjct: 141 TKESAKVLDCFEVE-EGTLNVKEP-LTKYEQKWLSMGKTLYKLILRKVK--EPKFVEHPE 196
Query: 296 ------AFDFSFDTITISKKSVGTILKTKKIIQEGYFVHVCNIYENKGDFLVELSMGDFD 349
F ++ K + + + K+ +E YF +++ DFLVE + +
Sbjct: 197 VEEVRELFPVKVKVESVDPKKIES--REIKLDEEVYF-KTFKVWQRDKDFLVECLLSEKG 253
Query: 350 WPVRLFVLLTENQIFY-LNKSP----LKTLNNHKAHLLLQNILS 388
+ + F+ + + Y ++ SP L+T N ++ + +LS
Sbjct: 254 YLQKFFIQIKRKEDGYVIDVSPYSEVLRTRNLQRSIQTVAQLLS 297
>ref|NP_284257.1| (NC_003116) conserved hypothetical protein [Neisseria meningitidis
Z2491]
sp|Q9JU19|MT04_NEIMA Hypothetical methyltransferase NMA1542
pir||A81846 conserved hypothetical protein NMA1542 [imported] - Neisseria
meningitidis (group A strain Z2491)
emb|CAB84769.1| (AL162756) conserved hypothetical protein [Neisseria meningitidis
Z2491]
Length = 238
Score = 82.8 bits (203), Expect = 6e-15
Identities = 52/167 (31%), Positives = 87/167 (51%), Gaps = 6/167 (3%)
Query: 120 PILIEIGFGSGRHLIELAKNNPTKTCLGIEIHTPSIAQALKQIELLDLKNLHILQGDGRL 179
P ++EIGFG G E+A+ P L I++H P + LK IE L+N+ +++ D
Sbjct: 66 PKILEIGFGMGTATAEIARRLPETDFLAIDVHGPGVGNLLKLIEENHLENIRVMRHDAVE 125
Query: 180 VLESM-PNHRCEKIFVHFPVPWNEKKH--RRVLSEKFLNEALRVLKPRGFLELRTDDSLY 236
V+E+M + + I + FP PW++K+H RR++ F+ + L LK G++ L TD Y
Sbjct: 126 VVENMLQDGSLDGIHIFFPDPWHKKRHHKRRLIQAPFIAKLLPKLKTGGYIHLATDWEEY 185
Query: 237 FEDSLKLALKNFQCEIEIKKNAQIP---VVSKYEARWNKLKKDIYDL 280
+ L++ + A P +K+EAR +L ++DL
Sbjct: 186 AQQMLEVLSSFDSLQNTAADYAPTPDYRPETKFEARGKRLGHGVWDL 232
>ref|NP_221195.1| (NC_000963) POSSIBLE PROTOPORPHYRINOGEN OXIDASE (hemK) [Rickettsia
prowazekii]
sp|Q9ZCB3|HEMK_RICPR HemK protein homolog (M.RprHemKP)
pir||G71646 probable protoporphyrinogen oxidase (hemK) RP847 - Rickettsia
prowazekii
emb|CAA15271.1| (AJ235273) POSSIBLE PROTOPORPHYRINOGEN OXIDASE (hemK) [Rickettsia
prowazekii]
Length = 518
Score = 81.6 bits (200), Expect = 1e-14
Identities = 44/134 (32%), Positives = 72/134 (52%), Gaps = 2/134 (1%)
Query: 121 ILIEIGFGSGRHLIELAKNNPTKTCLGIEIHTPSIAQALKQIELLDLKNLHILQGDGRLV 180
+ +EIGFG G HLI AK NP +G+E++ +A LK ++ N + + L+
Sbjct: 344 VFLEIGFGMGEHLINQAKINPDTLFIGVEVYLNGVANVLKHSAQHNITNFLLFPNNLDLI 403
Query: 181 LESMPNHRCEKIFVHFPVPW--NEKKHRRVLSEKFLNEALRVLKPRGFLELRTDDSLYFE 238
L +PN+ + I++ FP PW N+KK +R+ +++ L LK G L +D YF
Sbjct: 404 LNDLPNNSLDGIYILFPDPWIKNKKKKKRIFNKERLKILQNKLKNNGNLVFASDIENYFY 463
Query: 239 DSLKLALKNFQCEI 252
+++ L +N EI
Sbjct: 464 EAMALIRQNGNFEI 477
>ref|NP_274347.1| (NC_003112) conserved hypothetical protein [Neisseria meningitidis
MC58]
sp|Q9JZ24|MT04_NEIMB Hypothetical methyltransferase NMB1328
pir||C81095 conserved hypothetical protein NMB1328 [imported] - Neisseria
meningitidis (group B strain MD58)
gb|AAF41703.1| (AE002481) conserved hypothetical protein [Neisseria meningitidis
MC58]
Length = 238
Score = 81.6 bits (200), Expect = 1e-14
Identities = 51/167 (30%), Positives = 87/167 (51%), Gaps = 6/167 (3%)
Query: 120 PILIEIGFGSGRHLIELAKNNPTKTCLGIEIHTPSIAQALKQIELLDLKNLHILQGDGRL 179
P ++EIGFG G E+A+ P L I++H P + LK I+ L+N+ +++ D
Sbjct: 66 PKILEIGFGMGTATAEIARRLPETDFLAIDVHGPGVGNLLKLIDENHLENIRVMRHDAVE 125
Query: 180 VLESM-PNHRCEKIFVHFPVPWNEKKH--RRVLSEKFLNEALRVLKPRGFLELRTDDSLY 236
V+E+M + + I + FP PW++K+H RR++ F+ + L LK G++ L TD Y
Sbjct: 126 VVENMLQDGSLDGIHIFFPDPWHKKRHHKRRLIQAPFIAKLLPKLKTGGYIHLATDWEEY 185
Query: 237 FEDSLKLALKNFQCEIEIKKNAQIP---VVSKYEARWNKLKKDIYDL 280
+ L++ + A P +K+EAR +L ++DL
Sbjct: 186 AQQMLEVLSSFDSLQNTAADYAPTPDYRPETKFEARGKRLGHGVWDL 232
>ref|NP_602422.1| (NC_003454) 3-deoxy-D-manno-octulosonic-acid transferase;
SAM-dependent methyltransferase [Fusobacterium nucleatum
subsp. nucleatum ATCC 25586]
gb|AAL93721.1| (AE010468) 3-deoxy-D-manno-octulosonic-acid transferase;
SAM-dependent methyltransferase [Fusobacterium nucleatum
subsp. nucleatum ATCC 25586]
Length = 640
Score = 81.6 bits (200), Expect = 1e-14
Identities = 38/135 (28%), Positives = 75/135 (55%), Gaps = 2/135 (1%)
Query: 117 NQAPILIEIGFGSGRHLIELAKNNPTKTCLGIEIHTPSIAQALKQIELLDLKNLHILQGD 176
N I +EIG GSG + +LA+ NP K +G+E+ + A ++ + ++KN+ L+
Sbjct: 463 NSDQIAVEIGTGSGNFIYQLAERNPNKNFIGLELRFKRLVLAAQKCKKRNIKNVAFLRKR 522
Query: 177 GRLVLESMPNHRCEKIFVHFPVPWNEKKHRRVLSEKFLNEALRVLKPRGFLELRTDDSLY 236
G + + + N+ +++++FP PW + R++ E+ +++K G L +TD +Y
Sbjct: 523 GEELEDFLANNEISEMYINFPDPWEGTEKNRIIQERLFKTLDKIMKKDGMLYFKTDHDVY 582
Query: 237 FEDSLKL--ALKNFQ 249
+ D L+L L N++
Sbjct: 583 YNDVLELVKTLDNYE 597
>pir||A38535 hypothetical protein (MicA region) - Escherichia coli
Length = 229
Score = 80.9 bits (198), Expect = 2e-14
Identities = 51/171 (29%), Positives = 83/171 (47%), Gaps = 8/171 (4%)
Query: 118 QAPILIEIGFGSGRHLIELAKNNPTKTCLGIEIHTPSIAQALKQIELLDLKNLHILQGDG 177
+AP+ +EIGFG G L+ +AK+ P + LGIE+H+P + L L NL ++ D
Sbjct: 53 EAPVTLEIGFGMGASLVAMAKDRPEQDFLGIEVHSPGVGACLASAHEEGLSNLRVMCHDA 112
Query: 178 RLVLESM-PNHRCEKIFVHFPVPWNEKKH--RRVLSEKFLNEALRVLKPRGFLELRTDDS 234
VL M P++ + + FP PW++ +H RR++ F L+ G + TD
Sbjct: 113 VEVLHKMIPDNSLRMVQLFFPDPWHKARHNKRRIVQVPFAELVKSKLQLGGVFHMATDWE 172
Query: 235 LYFEDSLKL-----ALKNFQCEIEIKKNAQIPVVSKYEARWNKLKKDIYDL 280
Y E L++ KN + V+K+E R ++L ++DL
Sbjct: 173 PYAEHMLEVMSSIDGYKNLSESNDYVPRPASRPVTKFEQRGHRLGHGVWDL 223
>gb|AAA72956.1| (M59471) [micA] gene products [Escherichia coli]
Length = 230
Score = 80.9 bits (198), Expect = 2e-14
Identities = 51/171 (29%), Positives = 83/171 (47%), Gaps = 8/171 (4%)
Query: 118 QAPILIEIGFGSGRHLIELAKNNPTKTCLGIEIHTPSIAQALKQIELLDLKNLHILQGDG 177
+AP+ +EIGFG G L+ +AK+ P + LGIE+H+P + L L NL ++ D
Sbjct: 54 EAPVTLEIGFGMGASLVAMAKDRPEQDFLGIEVHSPGVGACLASAHEEGLSNLRVMCHDA 113
Query: 178 RLVLESM-PNHRCEKIFVHFPVPWNEKKH--RRVLSEKFLNEALRVLKPRGFLELRTDDS 234
VL M P++ + + FP PW++ +H RR++ F L+ G + TD
Sbjct: 114 VEVLHKMIPDNSLRMVQLFFPDPWHKARHNKRRIVQVPFAELVKSKLQLGGVFHMATDWE 173
Query: 235 LYFEDSLKL-----ALKNFQCEIEIKKNAQIPVVSKYEARWNKLKKDIYDL 280
Y E L++ KN + V+K+E R ++L ++DL
Sbjct: 174 PYAEHMLEVMSSIDGYKNLSESNDYVPRPASRPVTKFEQRGHRLGHGVWDL 224
>ref|NP_417435.1| (NC_000913) orf, hypothetical protein [Escherichia coli K12]
sp|P32049|MT04_ECOLI Hypothetical methyltransferase yggH
pir||G65081 hypothetical 27.3 kD protein in mutY 5' region - Escherichia coli
(strain K-12)
gb|AAA69127.1| (U28377) ORF_f239; alternate name yggH; orf of M59471 [Escherichia
coli]
gb|AAC75997.1| (AE000378) orf, hypothetical protein [Escherichia coli K12]
Length = 239
Score = 80.9 bits (198), Expect = 2e-14
Identities = 51/171 (29%), Positives = 83/171 (47%), Gaps = 8/171 (4%)
Query: 118 QAPILIEIGFGSGRHLIELAKNNPTKTCLGIEIHTPSIAQALKQIELLDLKNLHILQGDG 177
+AP+ +EIGFG G L+ +AK+ P + LGIE+H+P + L L NL ++ D
Sbjct: 63 EAPVTLEIGFGMGASLVAMAKDRPEQDFLGIEVHSPGVGACLASAHEEGLSNLRVMCHDA 122
Query: 178 RLVLESM-PNHRCEKIFVHFPVPWNEKKH--RRVLSEKFLNEALRVLKPRGFLELRTDDS 234
VL M P++ + + FP PW++ +H RR++ F L+ G + TD
Sbjct: 123 VEVLHKMIPDNSLRMVQLFFPDPWHKARHNKRRIVQVPFAELVKSKLQLGGVFHMATDWE 182
Query: 235 LYFEDSLKL-----ALKNFQCEIEIKKNAQIPVVSKYEARWNKLKKDIYDL 280
Y E L++ KN + V+K+E R ++L ++DL
Sbjct: 183 PYAEHMLEVMSSIDGYKNLSESNDYVPRPASRPVTKFEQRGHRLGHGVWDL 233
>ref|NP_289532.1| (NC_002655) orf, hypothetical protein [Escherichia coli O157:H7
EDL933]
ref|NP_311863.1| (NC_002695) hypothetical protein [Escherichia coli O157:H7]
gb|AAG58091.1|AE005526_4 (AE005526) orf, hypothetical protein [Escherichia coli O157:H7
EDL933]
dbj|BAB37259.1| (AP002563) hypothetical protein [Escherichia coli O157:H7]
Length = 239
Score = 80.1 bits (196), Expect = 4e-14
Identities = 50/171 (29%), Positives = 83/171 (48%), Gaps = 8/171 (4%)
Query: 118 QAPILIEIGFGSGRHLIELAKNNPTKTCLGIEIHTPSIAQALKQIELLDLKNLHILQGDG 177
+AP+ +EIGFG G L+ +AK+ P + LGIE+H+P + L L NL ++ D
Sbjct: 63 EAPVTLEIGFGMGASLVAMAKDRPEQDFLGIEVHSPGVGACLASAHEEGLSNLRVMCHDA 122
Query: 178 RLVLESM-PNHRCEKIFVHFPVPWNEKKH--RRVLSEKFLNEALRVLKPRGFLELRTDDS 234
VL M P++ + + FP PW++ +H RR++ F L+ G + TD
Sbjct: 123 VEVLHKMIPDNSLRMVQLFFPDPWHKARHNKRRIVQVPFAELVKSKLQLGGVFHMATDWE 182
Query: 235 LYFEDSLKL-----ALKNFQCEIEIKKNAQIPVVSKYEARWNKLKKDIYDL 280
Y E +++ KN + V+K+E R ++L ++DL
Sbjct: 183 PYAEHMIEVMSSIDGYKNLSESNDYVPRPASRPVTKFEQRGHRLGHGVWDL 233
>ref|NP_360951.1| (NC_003103) possible protoporphyrinogen oxidase [EC:1.3.3.4]
[Rickettsia conorii]
gb|AAL03852.1| (AE008678) possible protoporphyrinogen oxidase [EC:1.3.3.4]
[Rickettsia conorii]
Length = 524
Score = 79.3 bits (194), Expect = 7e-14
Identities = 48/156 (30%), Positives = 82/156 (51%), Gaps = 8/156 (5%)
Query: 121 ILIEIGFGSGRHLIELAKNNPTKTCLGIEIHTPSIAQALKQIELLDLKNLHILQGDGRLV 180
+ +EIGFG G H I AK NP +GIE++ +A LK ++ N + + L+
Sbjct: 350 VFLEIGFGMGEHFINQAKMNPNALFIGIEVYLNGVANVLKLAGEQNITNFLLFPNNLDLI 409
Query: 181 LESMPNHRCEKIFVHFPVPW--NEKKHRRVLSEKFLNEALRVLKPRGFLELRTDDSLYFE 238
L +P++ + I++ FP PW N++K +R+ +++ L LK G L +D YF
Sbjct: 410 LNEIPSNSLDGIYILFPDPWIKNKQKKKRIFNKERLKLLQDKLKDNGNLVFASDIENYFY 469
Query: 239 DSLKLALKNFQCEIEIKKNAQIP-----VVSKYEAR 269
++++L +N EI I KN + V++KY +
Sbjct: 470 EAIELIQQNGNFEI-INKNDYLKPHDNYVITKYHQK 504
>ref|NP_230107.1| (NC_002505) conserved hypothetical protein [Vibrio cholerae]
sp|Q9KUR2|MT04_VIBCH Hypothetical methyltransferase VC0453
pir||E82320 conserved hypothetical protein VC0453 [imported] - Vibrio cholerae
(group O1 strain N16961)
gb|AAF93626.1| (AE004132) conserved hypothetical protein [Vibrio cholerae]
Length = 239
Score = 79.0 bits (193), Expect = 9e-14
Identities = 48/174 (27%), Positives = 87/174 (49%), Gaps = 9/174 (5%)
Query: 117 NQAPILIEIGFGSGRHLIELAKNNPTKTCLGIEIHTPSIAQALKQIELLDLKNLHILQGD 176
N P+++EIGFG G L+E+AKN P K LGIE+H+P + L + NL ++ D
Sbjct: 61 NDNPVVLEIGFGMGASLVEMAKNAPEKNFLGIEVHSPGVGACLASAREAGVTNLRVMCHD 120
Query: 177 GRLVLESM-PNHRCEKIFVHFPVPWNEKKH--RRVLSEKFLNEA-LRVLKPRGFLELRTD 232
V M P++ + + FP PW++K+H RR++ +F +++ G + TD
Sbjct: 121 AVEVFAHMIPDNSLHTLQLFFPDPWHKKRHHKRRIVQLEFAEMVRQKLMIGSGVFHMATD 180
Query: 233 DSLYFEDSLKL-----ALKNFQCEIEIKKNAQIPVVSKYEARWNKLKKDIYDLR 281
Y E +++ N + + ++K+E R ++L ++D++
Sbjct: 181 WENYAEHMVEVMNQAPGFANLATDGDYVPRPDERPLTKFEQRGHRLGHGVWDIK 234
>ref|NP_325997.1| (NC_002771) conserved hypothetical protein [Mycoplasma pulmonis]
emb|CAC13339.1| (AL445563) conserved hypothetical protein [Mycoplasma pulmonis]
Length = 203
Score = 78.2 bits (191), Expect = 2e-13
Identities = 58/191 (30%), Positives = 99/191 (51%), Gaps = 9/191 (4%)
Query: 95 NSKHASGKKTLDLGTFEDFIQKNQAPILIEIGFGSGRHLIELAKNNPTKTCLGIEIHTPS 154
N+K+A + ++F K + +EIG G G+ LIELA+ NP K +GIE +
Sbjct: 5 NNKNAKLELESCENVIKNFPFKVEKNSTLEIGMGKGQMLIELAQKNPQKIFVGIEKYPTV 64
Query: 155 IAQALKQIELLDLKNLHILQGDGRLVLESMPNHRCEKIFVHFPVPWNEKKH--RRVLSEK 212
A K+ + L+L N I+ D L+ + I++ F PW +K+H RR+ EK
Sbjct: 65 ALIAAKKAKKLELNNFFIIVDDVENALDFFEG-TFDLIWLTFSDPWPKKRHYKRRLTYEK 123
Query: 213 FLNEALRVLKPRGFLELRTDDSLYFEDSLK------LALKNFQCEIEIKKNAQIPVVSKY 266
FL ++L G ++L+TD+ +F+ +L+ L + N ++E + A+ V + Y
Sbjct: 124 FLKIYSKILSENGLIKLKTDNDDFFQWTLESLEKNGLNIINKTSDLEKSEFAKDNVKTSY 183
Query: 267 EARWNKLKKDI 277
E ++ L K+I
Sbjct: 184 EQKFVSLGKNI 194
>ref|NP_249073.1| (NC_002516) DNA mismatch repair protein MicA [Pseudomonas
aeruginosa]
pir||E83596 DNA mismatch repair protein MicA PA0382 [imported] - Pseudomonas
aeruginosa (strain PAO1)
gb|AAG03771.1|AE004476_1 (AE004476) DNA mismatch repair protein MicA [Pseudomonas
aeruginosa]
Length = 223
Score = 76.6 bits (187), Expect = 5e-13
Identities = 53/178 (29%), Positives = 86/178 (47%), Gaps = 8/178 (4%)
Query: 112 DFIQKNQAPILIEIGFGSGRHLIELAKNNPTKTCLGIEIHTPSIAQALKQIELLDLKNLH 171
D I QAP EIGFG G +E+A P +G+E+H P + L + L N+
Sbjct: 41 DAIFGRQAPRTFEIGFGMGHSTLEMAAAAPDIDFIGVEVHKPGVGALLNGLLTQGLGNVR 100
Query: 172 ILQGDGRLVL-ESMPNHRCEKIFVHFPVPWNEKKH--RRVLSEKFLNEALRVLKPRGFLE 228
+ D VL + + +++ + FP PW++K+H RR++ +F R LK G L
Sbjct: 101 VYSCDALEVLRHCVADASLDRLLLFFPDPWHKKRHHKRRIVQPEFAELVRRKLKVGGVLH 160
Query: 229 LRTDDSLYFEDSLKL--ALKNFQCEIEIKKNAQIP---VVSKYEARWNKLKKDIYDLR 281
+ TD Y E L + A ++ + E + P V+K+E R +L ++DL+
Sbjct: 161 MATDWEPYAEHMLDVMSAAPGYRNQAEDGRFVPRPQERPVTKFERRGERLGHGVWDLK 218
>sp|Q9I6B3|MT04_PSEAE Hypothetical methyltransferase PA0382
Length = 244
Score = 76.6 bits (187), Expect = 5e-13
Identities = 53/178 (29%), Positives = 86/178 (47%), Gaps = 8/178 (4%)
Query: 112 DFIQKNQAPILIEIGFGSGRHLIELAKNNPTKTCLGIEIHTPSIAQALKQIELLDLKNLH 171
D I QAP EIGFG G +E+A P +G+E+H P + L + L N+
Sbjct: 62 DAIFGRQAPRTFEIGFGMGHSTLEMAAAAPDIDFIGVEVHKPGVGALLNGLLTQGLGNVR 121
Query: 172 ILQGDGRLVL-ESMPNHRCEKIFVHFPVPWNEKKH--RRVLSEKFLNEALRVLKPRGFLE 228
+ D VL + + +++ + FP PW++K+H RR++ +F R LK G L
Sbjct: 122 VYSCDALEVLRHCVADASLDRLLLFFPDPWHKKRHHKRRIVQPEFAELVRRKLKVGGVLH 181
Query: 229 LRTDDSLYFEDSLKL--ALKNFQCEIEIKKNAQIP---VVSKYEARWNKLKKDIYDLR 281
+ TD Y E L + A ++ + E + P V+K+E R +L ++DL+
Sbjct: 182 MATDWEPYAEHMLDVMSAAPGYRNQAEDGRFVPRPQERPVTKFERRGERLGHGVWDLK 239
>ref|NP_384518.1| (NC_003047) CONSERVED HYPOTHETICAL PROTEIN [Sinorhizobium meliloti]
emb|CAC41849.1| (AL591783) CONSERVED HYPOTHETICAL PROTEIN [Sinorhizobium meliloti]
Length = 251
Score = 75.9 bits (185), Expect = 8e-13
Identities = 43/123 (34%), Positives = 67/123 (53%), Gaps = 2/123 (1%)
Query: 121 ILIEIGFGSGRHLIELAKNNPTKTCLGIEIHTPSIAQALKQIELLDLKNLHILQGDGRLV 180
I +EIGFG G HLI A +P +G+E S+A+ L QIE ++N+ + D V
Sbjct: 79 IRLEIGFGGGEHLIHRAAEDPATGFIGVEPFVNSMAKLLGQIEAKAIRNIRLYDDDATQV 138
Query: 181 LESMPNHRCEKIFVHFPVPWNEKKH--RRVLSEKFLNEALRVLKPRGFLELRTDDSLYFE 238
L+ +P ++I + +P PW ++KH RR +S+ L+ R+LKP G +D Y
Sbjct: 139 LDWLPAASVDQIDLLYPDPWPKRKHWKRRFVSQINLDRFARILKPGGLFCFASDIDSYIN 198
Query: 239 DSL 241
+L
Sbjct: 199 WTL 201
>sp|Q9F411|MT04_MYCHO Hypothetical methyltransferase MG347 homolog
gb|AAG28841.1| (U59880) MG347-like protein [Mycoplasma hominis]
Length = 202
Score = 74.7 bits (182), Expect = 2e-12
Identities = 55/178 (30%), Positives = 95/178 (52%), Gaps = 11/178 (6%)
Query: 109 TFEDFIQKNQAPILIEIGFGSGRHLIELAKNNPTKTCLGIEIHTPSIAQALKQIELLDLK 168
TF+DF N+ ++EIG G G L +LA +P +G+E ++ ALK+ L+L+
Sbjct: 19 TFKDFPIDNKKNTILEIGMGRGTMLTKLALMHPDIEYIGLEKYSTPAYSALKKAIDLNLE 78
Query: 169 NLHILQGDGRLVLESMPNHRCEKIFVHFPVPWNEKKH--RRVLSEKFLNEALRVLKPRGF 226
N HI+ GD + L + ++ + I++ F PW +K+H RR++ FL VL G
Sbjct: 79 NFHIIIGDA-INLSTYFKNKIKTIWLTFSDPWPKKRHYKRRLVYRDFLKIYQNVLDKDGV 137
Query: 227 LELRTDDSLYFEDSLKLALKNFQCEIEIKK------NAQIP-VVSKYEARWNKLKKDI 277
+ +TD+ + ++ ++ LK +I + N +I V + YE ++NKL K+I
Sbjct: 138 VYFKTDNDMLYQFAID-ELKEINAKIIYQTSDLHHCNFKIENVFTDYEEKFNKLNKNI 194
>ref|NP_244127.1| (NC_002570) BH3261~unknown conserved protein [Bacillus halodurans]
sp|Q9K7U8|MT04_BACHD Hypothetical methyltransferase BH3261
dbj|BAB06980.1| (AP001518) BH3261~unknown conserved protein [Bacillus halodurans]
Length = 220
Score = 74.3 bits (181), Expect = 2e-12
Identities = 49/169 (28%), Positives = 89/169 (51%), Gaps = 9/169 (5%)
Query: 118 QAPILIEIGFGSGRHLIELAKNNPTKTCLGIEIHTPSIAQALKQIELLDLKNLHILQGDG 177
QAP+ IE+G G G+ L +AK++P +GIE + + A+++ + +L NL L D
Sbjct: 38 QAPLYIEVGTGKGQFLTGMAKHHPEINFIGIERYESVLVTAMERAKEAELTNLKFLSEDV 97
Query: 178 RLVLESMPNHRCEKIFVHFPVPWNEKKH--RRVLSEKFLNEALRVLKPRGFLELRTDDSL 235
+L+ + ++F++F PW +K+H RR+ + FL + VLK +G + +TD+
Sbjct: 98 YDLLDFFADGEVSRLFINFTDPWPKKRHEKRRLTYKDFLAKYEIVLKEKGDIHFKTDNQG 157
Query: 236 YFEDSLK------LALKNFQCEIEIKKNAQIPVVSKYEARWNKLKKDIY 278
FE SL + L N ++ + + + ++YE ++ K IY
Sbjct: 158 LFEYSLHSFSKYGMILHNVSLDLH-NSDFEGNIKTEYEEKFAKKGMRIY 205
>ref|NP_390868.1| (NC_000964) similar to hypothetical proteins [Bacillus subtilis]
sp|O34522|MT04_BACSU Hypothetical methyltransferase ytmQ
pir||B69997 conserved hypothetical protein ytmQ - Bacillus subtilis
gb|AAC00285.1| (AF008220) YtmQ [Bacillus subtilis]
emb|CAB14968.1| (Z99119) similar to hypothetical proteins [Bacillus subtilis]
Length = 213
Score = 73.6 bits (179), Expect = 4e-12
Identities = 48/179 (26%), Positives = 91/179 (50%), Gaps = 12/179 (6%)
Query: 117 NQAPILIEIGFGSGRHLIELAKNNPTKTCLGIEIHTPSIAQALKQIELLDLKNLHILQGD 176
N PI IE+G G G+ + +AK NP +GIE+ I A+++++ + +N+ +L D
Sbjct: 37 NDNPIHIEVGTGKGQFISGMAKQNPDINYIGIELFKSVIVTAVQKVKDSEAQNVKLLNID 96
Query: 177 GRLVLESMPNHRCEKIFVHFPVPWNEKKH--RRVLSEKFLNEALRVLKPRGFLELRTDDS 234
+ + ++++++F PW +K+H RR+ FL + V+ G + +TD+
Sbjct: 97 ADTLTDVFEPGEVKRVYLNFSDPWPKKRHEKRRLTYSHFLKKYEEVMGKGGSIHFKTDNR 156
Query: 235 LYFEDSLK------LALKNFQCEIEIKKNAQIPVVSKYEARWNKLKKDIYDLRIYSLEW 287
FE SLK L L ++ N + ++++YE +++ L + IY + EW
Sbjct: 157 GLFEYSLKSFSEYGLLLTYVSLDLH-NSNLEGNIMTEYEEKFSALGQPIYRAEV---EW 211
>ref|NP_073017.1| (NC_000908) conserved hypothetical protein [Mycoplasma genitalium]
sp|P47589|MT04_MYCGE Hypothetical methyltransferase MG347
pir||D64238 hypothetical protein homolog MG347 - Mycoplasma genitalium
gb|AAC71572.1| (U39716) conserved hypothetical protein [Mycoplasma genitalium]
Length = 210
Score = 73.6 bits (179), Expect = 4e-12
Identities = 53/184 (28%), Positives = 94/184 (50%), Gaps = 12/184 (6%)
Query: 111 EDFIQKNQAPILIEIGFGSGRHLIELAKNNPTKTCLGIEIHTPSIAQALKQIELLD--LK 168
+ F + + +++E+G G G LI+ A+ N +GIE + +A+ +I LD L+
Sbjct: 23 DKFAKFTKKQLVLELGCGKGTFLIKEAQKNNNFLFIGIEREPTIVLKAINKINKLDFNLE 82
Query: 169 NLHILQGDGRLVLESMPNHRCEKIFVHFPVPWNEKKH--RRVLSEKFLNEALRVLKPRGF 226
N+ +L D + + + +KIF++FP PW +K+H RR+ S FL +L G
Sbjct: 83 NILLLCTDAKQLDDYFQAESVQKIFINFPDPWPKKRHIQRRLTSPDFLKLFWNLLVKNGL 142
Query: 227 LELRTDDSLYFEDSLKLALKNFQC-----EIEIKKNAQIPV---VSKYEARWNKLKKDIY 278
+E +TD+ FE +L +N Q +I N++ +++YE R+ +L+ I
Sbjct: 143 IEFKTDNDKLFEYTLTTLQENSQIFEIIHQITDLNNSEFSFQNSITEYEQRFMELEIPIK 202
Query: 279 DLRI 282
L I
Sbjct: 203 KLVI 206
>ref|NP_518824.1| (NC_003295) CONSERVED HYPOTHETICAL PROTEIN [Ralstonia solanacearum]
emb|CAD14233.1| (AL646060) CONSERVED HYPOTHETICAL PROTEIN [Ralstonia solanacearum]
Length = 251
Score = 72.0 bits (175), Expect = 1e-11
Identities = 51/165 (30%), Positives = 77/165 (45%), Gaps = 6/165 (3%)
Query: 122 LIEIGFGSGRHLIELAKNNPTKTCLGIEIHTPSIAQALKQIELLDLKNLHILQGDGRLVL 181
+ EIGFG G +A+ P LG+E+H P + LK I + N+ I+ D VL
Sbjct: 80 IFEIGFGMGETSAHIAQLRPDDDFLGVEVHEPGVGALLKLIGERGIGNVRIVSHDAVEVL 139
Query: 182 ESM-PNHRCEKIFVHFPVPWNEKKH--RRVLSEKFLNEALRVLKPRGFLELRTDDSLYFE 238
M P + I V FP PW++K+H RR++ F+ L+P G+L TD Y
Sbjct: 140 AQMIPEGTLDGIHVFFPDPWHKKRHNKRRLIQGPFVARLAAHLRPGGYLHCATDWEEYAH 199
Query: 239 DSLKLALKNFQCEIEIKKNAQIP---VVSKYEARWNKLKKDIYDL 280
L++ E A P V+K+E R +L ++D+
Sbjct: 200 QMLEVLSAEPLLENTADGFAPRPDYRPVTKFEKRGLRLGHGVWDV 244
>ref|NP_110210.1| (NC_000912) similar to methyltransferase [Mycoplasma pneumoniae]
sp|P75256|MT04_MYCPN Hypothetical methyltransferase MG347 homolog (G12_orf210V)
pir||S73646 hypothetical protein HI0340 - Mycoplasma pneumoniae (strain ATCC
29342)
gb|AAB95968.1| (AE000029) similar to methyltransferase [Mycoplasma pneumoniae]
Length = 210
Score = 71.6 bits (174), Expect = 1e-11
Identities = 42/130 (32%), Positives = 72/130 (55%), Gaps = 4/130 (3%)
Query: 121 ILIEIGFGSGRHLIELAKNNPTKTCLGIEIHTPSIAQALKQIELLDLK--NLHILQGDGR 178
+ +EIG G L + A+ NP +GIE + +A+ ++ L++K NL I D
Sbjct: 33 LFVEIGCGKSWFLSQQAQQNPKCFFVGIEREPTIVLKAINKVNRLEVKPRNLLITCLDAN 92
Query: 179 LVLESMPNHRCEKIFVHFPVPWNEKKH--RRVLSEKFLNEALRVLKPRGFLELRTDDSLY 236
+ E + KIF++FP PW +K+H RR+ + FL + ++LK +G +E +TD+
Sbjct: 93 QLTEYLKPQSISKIFINFPDPWPKKRHTLRRLTAPHFLKQFHQLLKKQGLIEFKTDNDQL 152
Query: 237 FEDSLKLALK 246
FE +L++ K
Sbjct: 153 FEFTLEVLQK 162
>ref|NP_470992.1| (NC_003212) similar to unknown proteins [Listeria innocua]
emb|CAC96887.1| (AL596169) similar to unknown proteins [Listeria innocua]
Length = 214
Score = 71.6 bits (174), Expect = 1e-11
Identities = 43/127 (33%), Positives = 68/127 (52%), Gaps = 2/127 (1%)
Query: 117 NQAPILIEIGFGSGRHLIELAKNNPTKTCLGIEIHTPSIAQALKQIELLDLKNLHILQGD 176
N PI IEIG G G+ + +AK NP +GIE+ + AL + ++ NL ++ D
Sbjct: 37 NNNPIHIEIGSGKGQFISGMAKANPEINYIGIEMIESVLVSALDKAIEAEVPNLRLVARD 96
Query: 177 GRLVLESMPNHRCEKIFVHFPVPWNEKKH--RRVLSEKFLNEALRVLKPRGFLELRTDDS 234
+L+ ES +I+++F PW +K+H RR+ + FL R+L G + +TD+
Sbjct: 97 AKLLEESFEKGEIAQIYLNFSDPWPKKRHTKRRLTNPTFLTIYERLLPKAGEIHFKTDNR 156
Query: 235 LYFEDSL 241
FE SL
Sbjct: 157 SLFEYSL 163
>ref|NP_658728.1| (NC_003995) Methyltransf_4, Putative methyltransferase [Bacillus
anthracis A2012] [Bacillus anthracis str. A2012]
Length = 217
Score = 70.9 bits (172), Expect = 2e-11
Identities = 41/127 (32%), Positives = 67/127 (52%), Gaps = 2/127 (1%)
Query: 117 NQAPILIEIGFGSGRHLIELAKNNPTKTCLGIEIHTPSIAQALKQIELLDLKNLHILQGD 176
N+ PI IE+G G GR + ++AK NP +GIE T + AL ++ +L NL ++ D
Sbjct: 37 NEQPIHIEVGTGRGRFMYDMAKANPHINYIGIEKFTSVVVDALDKLIEEELPNLKLINKD 96
Query: 177 GRLVLESMPNHRCEKIFVHFPVPWNEKKH--RRVLSEKFLNEALRVLKPRGFLELRTDDS 234
+ ++++++F PW +K+H RR+ + FL VL G + +TD+
Sbjct: 97 AEDLTVFFAKGEIDRVYLNFSDPWPKKRHTKRRLTYKTFLRNYEEVLVEGGEIHFKTDNQ 156
Query: 235 LYFEDSL 241
FE SL
Sbjct: 157 GLFEYSL 163
>ref|NP_465140.1| (NC_003210) similar to unknown proteins [Listeria monocytogenes
EGD-e]
emb|CAC99693.1| (AL591980) similar to unknown proteins [Listeria monocytogenes]
Length = 214
Score = 70.9 bits (172), Expect = 2e-11
Identities = 42/127 (33%), Positives = 68/127 (53%), Gaps = 2/127 (1%)
Query: 117 NQAPILIEIGFGSGRHLIELAKNNPTKTCLGIEIHTPSIAQALKQIELLDLKNLHILQGD 176
N PI IEIG G G+ + +AK NP +GIE+ + AL + +D+ NL ++ D
Sbjct: 37 NDNPIHIEIGSGKGQFISGMAKANPEINYIGIEMIESVLVSALDKAIEVDVPNLRLVARD 96
Query: 177 GRLVLESMPNHRCEKIFVHFPVPWNEKKH--RRVLSEKFLNEALRVLKPRGFLELRTDDS 234
+L+ + +I+++F PW +K+H RR+ + FL R+L G + +TD+
Sbjct: 97 AKLLEDCFEKGEIAQIYLNFSDPWPKKRHTKRRLTNPTFLTIYERLLPKAGEIHFKTDNR 156
Query: 235 LYFEDSL 241
FE SL
Sbjct: 157 SLFEYSL 163
>ref|NP_345067.1| (NC_003028) conserved hypothetical protein [Streptococcus
pneumoniae TIGR4]
ref|NP_358070.1| (NC_003098) Conserved hypothetical protein [Streptococcus
pneumoniae R6]
gb|AAK74707.1| (AE007365) conserved hypothetical protein [Streptococcus pneumoniae
TIGR4]
gb|AAK99280.1| (AE008427) Conserved hypothetical protein [Streptococcus pneumoniae
R6]
Length = 211
Score = 70.1 bits (170), Expect = 4e-11
Identities = 38/127 (29%), Positives = 70/127 (54%), Gaps = 2/127 (1%)
Query: 117 NQAPILIEIGFGSGRHLIELAKNNPTKTCLGIEIHTPSIAQALKQIELLDLKNLHILQGD 176
N PI +E+G G G + +AK NP +GI+I ++ AL ++ + + N+ +L D
Sbjct: 37 NDNPIHVEVGSGKGAFVSGMAKQNPDINYIGIDIQKSVLSYALDKVLEVGVPNIKLLWVD 96
Query: 177 GRLVLESMPNHRCEKIFVHFPVPWNEKKH--RRVLSEKFLNEALRVLKPRGFLELRTDDS 234
G + + + ++++++F PW +K+H RR+ + FL+ R+L G + +TD+
Sbjct: 97 GSDLTDYFEDGEIDRLYLNFSDPWPKKRHEKRRLTYKTFLDTFKRILPENGEIHFKTDNR 156
Query: 235 LYFEDSL 241
FE SL
Sbjct: 157 GLFEYSL 163
>ref|NP_628290.1| (NC_003888) conserved hypothetical protein [Streptomyces coelicolor
A3(2)]
sp|Q9F305|MT04_STRCO Hypothetical methyltransferase SCO4111
emb|CAC08407.1| (AL392177) conserved hypothetical protein [Streptomyces coelicolor
A3(2)]
Length = 271
Score = 70.1 bits (170), Expect = 4e-11
Identities = 44/144 (30%), Positives = 69/144 (47%), Gaps = 7/144 (4%)
Query: 101 GKKTLDLGTFEDFIQKNQAPILIEIGFGSGRHLIELAKNNPTKTCLGIEIHTPSIAQALK 160
G++ +DL + N P+++EIGFG G +A +P L ++HTP L
Sbjct: 74 GRRVVDLAE----LFGNARPVVLEIGFGMGETTARMAAADPDTNILAADVHTPGQGNLLG 129
Query: 161 QIELLDLKNLHILQGDGRLVL-ESMPNHRCEKIFVHFPVPWNEKKH--RRVLSEKFLNEA 217
E +L N+ + GD ++L E + + V+FP PW +K+H RR++ +FL A
Sbjct: 130 LAERQELPNIRVANGDAIILLREMLAPGSLAGLRVYFPDPWPKKRHHKRRLIQPEFLTLA 189
Query: 218 LRVLKPRGFLELRTDDSLYFEDSL 241
L P + TD Y E L
Sbjct: 190 ATRLAPGAVVHCATDWEPYAEQML 213
>ref|NP_353395.1| (NC_003062) AGR_C_634p [Agrobacterium tumefaciens] [Agrobacterium
tumefaciens str. C58 (Cereon)]
ref|NP_531069.1| (NC_003304) conserved hypothetical protein [Agrobacterium
tumefaciens str. C58 (U. Washington)]
gb|AAK86180.1| (AE007974) AGR_C_634p [Agrobacterium tumefaciens str. C58 (Cereon)]
gb|AAL41385.1| (AE009007) conserved hypothetical protein [Agrobacterium
tumefaciens str. C58 (U. Washington)]
Length = 232
Score = 69.3 bits (168), Expect = 7e-11
Identities = 42/124 (33%), Positives = 63/124 (49%), Gaps = 2/124 (1%)
Query: 121 ILIEIGFGSGRHLIELAKNNPTKTCLGIEIHTPSIAQALKQIELLDLKNLHILQGDGRLV 180
I +EIGFG G HL A NP +G+E S+A+ L + +L N+ + D +
Sbjct: 60 IRLEIGFGGGEHLAHRAVENPETGFIGVEPFVNSMAKLLATVRERELMNIRLYDDDATQL 119
Query: 181 LESMPNHRCEKIFVHFPVPWNEKKH--RRVLSEKFLNEALRVLKPRGFLELRTDDSLYFE 238
L+ +P + I + +P PW +KKH RR +S+ L RVLKP G +D Y
Sbjct: 120 LDWLPEGSIDHIDLLYPDPWPKKKHWKRRFVSDVNLARFHRVLKPGGKFCFASDIDTYVN 179
Query: 239 DSLK 242
+L+
Sbjct: 180 WTLQ 183
>ref|NP_607764.1| (NC_003485) putative methyltransferase [Streptococcus pyogenes
MGAS8232]
gb|AAL98263.1| (AE010083) putative methyltransferase [Streptococcus pyogenes
MGAS8232]
Length = 211
Score = 69.3 bits (168), Expect = 7e-11
Identities = 45/170 (26%), Positives = 86/170 (50%), Gaps = 9/170 (5%)
Query: 117 NQAPILIEIGFGSGRHLIELAKNNPTKTCLGIEIHTPSIAQALKQIELLDLKNLHILQGD 176
N PI IE+G G G + +A NP +GI+I ++ AL ++ ++ N+ +L+ D
Sbjct: 37 NDRPIHIEVGSGKGGFITGMALKNPDINYIGIDIQLSVLSYALDKVLASEVPNVKLLRVD 96
Query: 177 GRLVLESMPNHRCEKIFVHFPVPWNEKKH--RRVLSEKFLNEALRVLKPRGFLELRTDDS 234
G + + + ++++F PW + KH RR+ + FL+ R+L G + +TD+
Sbjct: 97 GSSLTNYFEDGEVDMMYLNFSDPWPKTKHEKRRLTYKDFLDTYKRILPEHGEIHFKTDNR 156
Query: 235 LYFEDSLK------LALKNFQCEIEIKKNAQIPVVSKYEARWNKLKKDIY 278
FE SL + L+ ++ N + V+++YE +++ + IY
Sbjct: 157 GLFEYSLASFSQYGMTLRQIWLDLH-ASNYEGNVMTEYEEKFSNKGQVIY 205
>ref|NP_269750.1| (NC_002737) conserved hypothetical protein [Streptococcus pyogenes]
[Streptococcus pyogenes M1 GAS]
sp|P58090|MT04_STRPY Hypothetical methyltransferase SPy1726
gb|AAK34471.1| (AE006601) conserved hypothetical protein [Streptococcus pyogenes
M1 GAS]
Length = 211
Score = 69.3 bits (168), Expect = 7e-11
Identities = 45/170 (26%), Positives = 86/170 (50%), Gaps = 9/170 (5%)
Query: 117 NQAPILIEIGFGSGRHLIELAKNNPTKTCLGIEIHTPSIAQALKQIELLDLKNLHILQGD 176
N PI IE+G G G + +A NP +GI+I ++ AL ++ ++ N+ +L+ D
Sbjct: 37 NDRPIHIEVGSGKGGFITGMALKNPDINYIGIDIQLSVLSYALDKVLASEVPNVKLLRVD 96
Query: 177 GRLVLESMPNHRCEKIFVHFPVPWNEKKH--RRVLSEKFLNEALRVLKPRGFLELRTDDS 234
G + + + ++++F PW + KH RR+ + FL+ R+L G + +TD+
Sbjct: 97 GSSLTNYFEDGEVDMMYLNFSDPWPKTKHEKRRLTYKDFLDTYKRILPEHGEIHFKTDNR 156
Query: 235 LYFEDSLK------LALKNFQCEIEIKKNAQIPVVSKYEARWNKLKKDIY 278
FE SL + L+ ++ N + V+++YE +++ + IY
Sbjct: 157 GLFEYSLASFSQYGMTLRQIWLDLH-ASNYEGNVMTEYEEKFSNKGQVIY 205
>ref|NP_266905.1| (NC_002662) HYPOTHETICAL PROTEIN [Lactococcus lactis subsp. lactis]
sp|Q9CHI2|MT04_LACLA Hypothetical methyltransferase yhfE
gb|AAK04847.1|AE006308_7 (AE006308) HYPOTHETICAL PROTEIN [Lactococcus lactis subsp. lactis]
Length = 217
Score = 68.9 bits (167), Expect = 9e-11
Identities = 46/174 (26%), Positives = 92/174 (52%), Gaps = 11/174 (6%)
Query: 117 NQAPILIEIGFGSGRHLIELAKNNPTKTCLGIEIHTPSIAQALKQIELLDLKNLHILQGD 176
N PI IE+G G G + +A +P + I++ ++ AL + DL N+ ++ D
Sbjct: 37 NDHPIHIEVGCGKGAFITGMAALHPEINYIAIDMQLSVLSYALDKAIEADLPNVQMMLVD 96
Query: 177 GRLVLESMPNHRCEKIFVHFPVPWNEKKH--RRVLSEKFLNEALRVLKPRGFLELRTDDS 234
G + E + ++++++F PW + +H RR+ + FL ++L+P G + +TD+
Sbjct: 97 GAALSEYFADGEIDQVYLNFSDPWPKGRHEKRRLTYKSFLATYEKILRPEGEIHFKTDNR 156
Query: 235 LYFEDSLKLALKNFQCEI--------EIKKNAQIPVVSKYEARWNKLKKDIYDL 280
FE SL ++L N+ E+ + ++ A V+++YE ++++ + IY L
Sbjct: 157 GLFEYSL-VSLANYGMELKKVWLDLHQDEEFAPQNVMTEYEQKFSQKGQVIYRL 209
>ref|NP_218905.1| (NC_000919) conserved hypothetical protein [Treponema pallidum]
sp|O83477|MT04_TREPA Hypothetical methyltransferase TP0464
pir||B71321 conserved hypothetical protein TP0464 - syphilis spirochete
gb|AAC65448.1| (AE001223) conserved hypothetical protein [Treponema pallidum]
Length = 250
Score = 68.9 bits (167), Expect = 9e-11
Identities = 43/121 (35%), Positives = 64/121 (52%), Gaps = 3/121 (2%)
Query: 119 APILIEIGFGSGRHLIELAKNNPTKTCLGIEIHTPSIAQALKQIELLDLKNLHILQGDGR 178
AP+++EIGFG G +A NP + LGIE++ I + L++IE L NL I++ D
Sbjct: 81 APLVVEIGFGMGSATAAIAARNPHLSYLGIEVYRAGIGRLLRKIEAERLHNLRIIEHDAL 140
Query: 179 LVLESM-PNHRCEKIFVHFPVPWNEKKH--RRVLSEKFLNEALRVLKPRGFLELRTDDSL 235
VL +M + + FP PW + +H RR+L + R L P G+L TD +
Sbjct: 141 DVLRTMIAPQTLAGLHIFFPDPWPKTRHHKRRLLYRPRTDLLARALAPGGYLYAVTDWAE 200
Query: 236 Y 236
Y
Sbjct: 201 Y 201
>ref|NP_638497.1| (NC_003902) DNA mismatch repair protein [Xanthomonas campestris pv.
campestris str. ATCC 33913]
gb|AAM42421.1| (AE012430) DNA mismatch repair protein [Xanthomonas campestris pv.
campestris str. ATCC 33913]
Length = 261
Score = 68.2 bits (165), Expect = 2e-10
Identities = 52/192 (27%), Positives = 95/192 (49%), Gaps = 13/192 (6%)
Query: 112 DFIQKNQAPILIEIGFGSGRHLIELAKNNPTKTCLGIEIHTPSIAQALKQIELLDLKNLH 171
D + AP ++EIGFG+G L A+++P + +GIE+H P + + L ++ ++
Sbjct: 63 DAVFGRPAPKVLEIGFGNGAALRFAAQHDPARDYIGIEVHAPGVGRLLNALDDDGATHVR 122
Query: 172 ILQGDGRLVLE-SMPNHRCEKIFVHFPVPWNEKKH--RRVLSEKFLNEALRVLKPRGFLE 228
+ D VLE + + +++ ++FP PW++K+H RR++ F +R L+ G L
Sbjct: 123 LYHHDAVEVLEREIADGALDEVRIYFPDPWHKKRHNKRRLVQPAFAQLLVRKLRDGGRLH 182
Query: 229 LRTDDSLYFE------DSLKLALKNFQCEIEIKKNAQIPVVSKYEARWNKLKKDIYDL-- 280
TD + Y E D+ + + + + A P + +E R KL ++DL
Sbjct: 183 AATDWADYAEQMWDVLDATEGLVNRAGPRGHVARPAWRP-QTHFETRGQKLGHGVWDLLY 241
Query: 281 -RIYSLEWNETP 291
R +E E+P
Sbjct: 242 DRESGMENRESP 253
>ref|NP_349234.1| (NC_003030) Predicted S-adenosylmethionine-dependent
methyltransferase, YtmQ B.subtilis ortholog [Clostridium
acetobutylicum]
gb|AAK80574.1|AE007760_4 (AE007760) Predicted S-adenosylmethionine-dependent
methyltransferase, YtmQ B.subtilis ortholog [Clostridium
acetobutylicum]
Length = 211
Score = 65.9 bits (159), Expect = 8e-10
Identities = 46/168 (27%), Positives = 80/168 (47%), Gaps = 13/168 (7%)
Query: 116 KNQAPILIEIGFGSGRHLIELAKNNPTKTCLGIEIHTPSIAQALKQIELLDLKNLHILQG 175
KN I +E+G G G + +A +P K + I++ IA AL++I +++N+ I
Sbjct: 35 KNDNEIYLELGCGRGDFVTNIANKHPEKNYVAIDLKDEVIAIALRKITESEVQNVRIAPL 94
Query: 176 DGRLVLESMPNHRCEKIFVHFPVPWNEKKH--RRVLSEKFLNEALRVLKPRGFLELRTDD 233
+ E +I+++F PW + +H RR+ KFL + LKP + +TDD
Sbjct: 95 QIAFINEVFDKDEIARIYINFCNPWPKDRHKKRRLTHTKFLTKYKEFLKPNSQIWFKTDD 154
Query: 234 SLYFEDSLKLALKNFQCEIEI--------KKNAQIPVVSKYEARWNKL 273
F +SL +C +I K +V++YE+++ KL
Sbjct: 155 DGLFVESLDYFK---ECGFQIKFMTYDLHKSGFDKNIVTEYESKFLKL 199
>ref|NP_643610.1| (NC_003919) DNA mismatch repair protein [Xanthomonas axonopodis pv.
citri str. 306]
gb|AAM38146.1| (AE011975) DNA mismatch repair protein [Xanthomonas axonopodis pv.
citri str. 306]
Length = 261
Score = 65.5 bits (158), Expect = 1e-09
Identities = 37/120 (30%), Positives = 67/120 (55%), Gaps = 3/120 (2%)
Query: 122 LIEIGFGSGRHLIELAKNNPTKTCLGIEIHTPSIAQALKQIELLDLKNLHILQGDGRLVL 181
++EIGFG+G L A+ +P++ +GIE+H P + + L +E ++ + D VL
Sbjct: 73 VLEIGFGNGAALRFAAQQDPSRDYIGIEVHAPGVGRLLNALEEDGSTHVRLYHHDAVEVL 132
Query: 182 E-SMPNHRCEKIFVHFPVPWNEKKH--RRVLSEKFLNEALRVLKPRGFLELRTDDSLYFE 238
E + + +++ ++FP PW++K+H RR++ F +R L+ G L TD + Y E
Sbjct: 133 EHEIADGALDEVRIYFPDPWHKKRHNKRRLIQPAFAQLLVRKLREGGRLHAATDWADYAE 192
>ref|NP_078103.1| (NC_002162) conserved hypothetical [Ureaplasma urealyticum]
sp|Q9PQM2|MT04_UREPA Hypothetical methyltransferase UU269
pir||G82913 conserved hypothetical UU269 [imported] - Ureaplasma urealyticum
gb|AAF30678.1|AE002123_11 (AE002123) conserved hypothetical [Ureaplasma urealyticum]
Length = 224
Score = 65.1 bits (157), Expect = 1e-09
Identities = 40/122 (32%), Positives = 63/122 (50%), Gaps = 2/122 (1%)
Query: 118 QAPILIEIGFGSGRHLIELAKNNPTKTCLGIEIHTPSIAQALKQIELLDLKNLHILQGDG 177
+ P+ IEIG G G +IE A N LGIE I +A K+ L NL ++ D
Sbjct: 39 ELPLYIEIGMGKGDFIIENALRNQQINYLGIEKFPTVIVKAHKKALKHKLDNLAMICFDA 98
Query: 178 RLVLESMPNHRCEKIFVHFPVPWNEKKH--RRVLSEKFLNEALRVLKPRGFLELRTDDSL 235
+LE + + +KI+++F PW +K+H +R+ FL + +LK +E +TD+
Sbjct: 99 NKILELLNSESVDKIYLNFSDPWPKKRHAKKRLTHPCFLEKFAVILKQNALVEFKTDNEN 158
Query: 236 YF 237
F
Sbjct: 159 LF 160
>ref|NP_295403.1| (NC_001263) conserved hypothetical protein [Deinococcus
radiodurans]
sp|Q9RTS6|MT04_DEIRA Hypothetical methyltransferase DR1680
pir||F75365 conserved hypothetical protein - Deinococcus radiodurans (strain
R1)
gb|AAF11238.1|AE002010_1 (AE002010) conserved hypothetical protein [Deinococcus radiodurans]
Length = 322
Score = 64.3 bits (155), Expect = 2e-09
Identities = 68/252 (26%), Positives = 108/252 (41%), Gaps = 27/252 (10%)
Query: 120 PILIEIGFGSGRHLIELAKNNPTK-TCLGIEIHTPSIAQALKQIELLDLKNLHILQGDGR 178
P ++EIGFG GR A+ P LG+EI S+ +A ++++ L N + +
Sbjct: 25 PWVLEIGFGDGRFWPHYARTFPEPPNYLGVEISGVSLLKAHRRLKDAGLTNAVLTKLPAE 84
Query: 179 -LVLESMPNHRCEKIFVHFPVPWNEKKHR--RVLSEKFLNEALRVLKPRGFLELRTDDSL 235
LV + +P+ + I V+FP PW + H R+L F A LKP G L TD
Sbjct: 85 VLVAQVIPHGSLDAIIVNFPDPWPKAGHEDHRLLRVPFFQVAASRLKPGGAALLTTDHDE 144
Query: 236 YFEDSLKLALKNFQCEIEIKKNAQIPVVSKYEARWNKLKKDIYDLRI------------Y 283
YFE + A + +E + +KY +W L + R +
Sbjct: 145 YFEFACAQAEASGVMRVERVGPPPAALETKYAQKWRDLGLGVNHARFVPTRHDPVPNGTF 204
Query: 284 SLEWNETPFDNHAF-----DFS---FDTITISKKS-VGTILKTKKIIQEGYFVHVCNIYE 334
+ E P HA DFS FD +T+ K+ +L ++ G +V + ++ E
Sbjct: 205 APYSEEDPAVPHAVLTLPADFSPQHFDKLTVRGKTWTVVLLDLYATLRRGGWVALAHVVE 264
Query: 335 NKGDFLVELSMG 346
GD E+ +G
Sbjct: 265 --GDLTQEVLVG 274
>ref|NP_106193.1| (NC_002678) hypothetical protein [Mesorhizobium loti]
dbj|BAB51979.1| (AP003006) hypothetical protein [Mesorhizobium loti]
Length = 247
Score = 63.2 bits (152), Expect = 5e-09
Identities = 38/118 (32%), Positives = 56/118 (47%), Gaps = 2/118 (1%)
Query: 121 ILIEIGFGSGRHLIELAKNNPTKTCLGIEIHTPSIAQALKQIELLDLKNLHILQGDGRLV 180
+ +EIGFG G HL+ A PT +G+E +A+ + + L NL + D +
Sbjct: 75 VRLEIGFGGGEHLLHRAIEAPTTGFIGVEPFVNGMAKMMMAVRARPLANLRVHDDDATRL 134
Query: 181 LESMPNHRCEKIFVHFPVPWNEKKH--RRVLSEKFLNEALRVLKPRGFLELRTDDSLY 236
L+ +P I + +P PW +KKH RR +S L RVLKP +D Y
Sbjct: 135 LDWLPPASLGGIDLLYPDPWPKKKHWKRRFVSPVNLERFARVLKPGAKFRFASDIDTY 192
>ref|NP_602057.1| (NC_003450) COG0220:Predicted S-adenosylmethionine-dependent
methyltransferase [Corynebacterium glutamicum]
dbj|BAC00259.1| (AP005283) Predicted S-adenosylmethionine-dependent
methyltransferase [Corynebacterium glutamicum ATCC
13032]
Length = 255
Score = 62.8 bits (151), Expect = 7e-09
Identities = 45/158 (28%), Positives = 78/158 (48%), Gaps = 11/158 (6%)
Query: 92 LQENSKHASGKKTLDLG-TFED-------FIQKNQAPILIEIGFGSGRHLIELAKNNPTK 143
L EN + +K +LG ED + + A ++EIG G+G +A
Sbjct: 43 LTENQQTMWDEKWPELGRVLEDELIDVDAWFGREGAKTIVEIGSGTGTSTAAMAPLEADT 102
Query: 144 TCLGIEIHTPSIAQALKQIELLDLKNLHILQGDGRLVLESM-PNHRCEKIFVHFPVPWNE 202
+ +E++ P +A+ + + ++ N+ +++GDG VL M + + I V+FP PW +
Sbjct: 103 NIVAVELYKPGLAKLMGSVVRGEIDNVRMVRGDGIEVLNRMFADGSLDGIRVYFPDPWPK 162
Query: 203 KKH--RRVLSEKFLNEALRVLKPRGFLELRTDDSLYFE 238
+H RR++ LN + LKP G L + TD + Y E
Sbjct: 163 ARHNKRRIIQSGPLNLFAKKLKPGGVLHVATDHADYAE 200
>ref|NP_298074.1| (NC_002488) conserved hypothetical protein [Xylella fastidiosa
9a5c]
sp|Q9PF94|MT04_XYLFA Hypothetical methyltransferase XF0784
pir||G82761 conserved hypothetical protein XF0784 [imported] - Xylella
fastidiosa (strain 9a5c)
gb|AAF83594.1|AE003919_5 (AE003919) conserved hypothetical protein [Xylella fastidiosa 9a5c]
Length = 244
Score = 62.4 bits (150), Expect = 9e-09
Identities = 45/177 (25%), Positives = 85/177 (47%), Gaps = 8/177 (4%)
Query: 112 DFIQKNQAPILIEIGFGSGRHLIELAKNNPTKTCLGIEIHTPSIAQALKQIELLDLKNLH 171
D + AP ++E+GFG+G L A++ P +GIE++ P + + L + +++
Sbjct: 63 DVLFGRSAPKVLEVGFGNGAALRFAAQHEPRYDYIGIEVYAPGVGRLLNGLAEDGSRHVR 122
Query: 172 ILQGDGRLVL-ESMPNHRCEKIFVHFPVPWNEKKH--RRVLSEKFLNEALRVLKPRGFLE 228
+ D VL + + + ++I ++FP PW++K+H RR++ F +R L+ G L
Sbjct: 123 LYHYDAVEVLNKEIVDGALDEIRIYFPDPWHKKRHHKRRLIQPLFATLLVRKLRVGGCLH 182
Query: 229 LRTDDSLYFEDSLKLALKNFQCEIEIKKNAQIP-----VVSKYEARWNKLKKDIYDL 280
+ TD + Y E + Q+P V +++E R L ++DL
Sbjct: 183 MATDWADYAEQMWDVLDATPGLVNRAGLRGQVPCPDWRVQTRFERRGQNLGHRVWDL 239
>ref|NP_540886.1| (NC_003317) SAM-DEPENDENT METHYLTRANSFERASE [Brucella melitensis]
gb|AAL53150.1| (AE009630) SAM-DEPENDENT METHYLTRANSFERASE [Brucella melitensis]
Length = 233
Score = 60.8 bits (146), Expect = 3e-08
Identities = 43/145 (29%), Positives = 70/145 (47%), Gaps = 7/145 (4%)
Query: 105 LDLGTF--EDFIQKNQAPI---LIEIGFGSGRHLIELAKNNPTKTCLGIEIHTPSIAQAL 159
LDL T +D +AP+ +EIGFG G HL + P +G+E +A+ L
Sbjct: 40 LDLATPAPQDLRSLFEAPVETVRMEIGFGGGEHLHHESGRYPQSGFIGVEPFINGMAKML 99
Query: 160 KQIELLDLKNLHILQGDGRLVLESMPNHRCEKIFVHFPVPWNEKKH--RRVLSEKFLNEA 217
++ NL + D VL+ +P+ I + +P PW++++H RR +S+ L+
Sbjct: 100 AALDQAPRPNLRLYDEDATAVLDWLPDASLAGIDLFYPDPWHKRRHWKRRFVSDANLDRF 159
Query: 218 LRVLKPRGFLELRTDDSLYFEDSLK 242
RVLKP +D Y +L+
Sbjct: 160 ARVLKPGAKFRFASDIEHYVNWTLQ 184
>sp|P73161|MT04_SYNY3 Hypothetical methyltransferase sll1300
Length = 211
Score = 60.5 bits (145), Expect = 3e-08
Identities = 40/132 (30%), Positives = 69/132 (51%), Gaps = 8/132 (6%)
Query: 106 DLGTFEDFIQKNQAPILIEIGFGSGRHLIELAKNNPTKTCLGIEIHTPSIAQALKQIELL 165
D T D +Q+ P+ ++IG GR +++A+ +P LG+EI P + +A + + L
Sbjct: 25 DWATVYDDVQR---PLHLDIGCARGRFPLKMAQQHPDWNFLGVEIRQPLVLEANETGDRL 81
Query: 166 DLKNLHILQGDGRLVLE---SMPNHRCEKIFVHFPVPWNEKKH--RRVLSEKFLNEALRV 220
LKNLH L G+ + E S +++ + FP PW +++H RRV + +
Sbjct: 82 GLKNLHYLFGNINVEPEKFFSAFPPTLQRVSIQFPDPWFKQRHNKRRVAQPELVTAIANA 141
Query: 221 LKPRGFLELRTD 232
L P G + L++D
Sbjct: 142 LPPGGEVLLQSD 153
>ref|NP_646508.1| (NC_003923) conserved hypothetical protein [Staphylococcus aureus
subsp. aureus MW2]
dbj|BAB95556.1| (AP004828) conserved hypothetical protein [Staphylococcus aureus
subsp. aureus MW2]
Length = 214
Score = 60.5 bits (145), Expect = 3e-08
Identities = 40/137 (29%), Positives = 67/137 (48%), Gaps = 3/137 (2%)
Query: 108 GTFEDFIQKNQAPILIEIGFGSGRHLIELAKNNPTKTCLGIEIHTPSIAQALKQIELLDL 167
G ++ K Q PI IEIG G G+ + LA NP + +E + + L +++ + L
Sbjct: 28 GKMTEWFDKTQ-PIHIEIGSGMGQFITTLAAQNPHINYISMEREKSIVYKVLDKVKEMSL 86
Query: 168 KNLHILQGDGRLVLESMPNHRCEKIFVHFPVPWNEKKH--RRVLSEKFLNEALRVLKPRG 225
NL I+ D + E + +I+++F PW + +H RR+ FL ++L G
Sbjct: 87 TNLKIICNDAIELNEYFKDGEVSRIYLNFSDPWPKNRHAKRRLTYHTFLALYQQILNDEG 146
Query: 226 FLELRTDDSLYFEDSLK 242
L +TD+ F SL+
Sbjct: 147 DLHFKTDNRGLFAYSLE 163
>ref|NP_440507.1| (NC_000911) hypothetical protein [Synechocystis sp. PCC 6803]
pir||S75273 hypothetical protein sll1300 - Synechocystis sp. (strain PCC 6803)
dbj|BAA17187.1| (D90904) ORF_ID:sll1300~hypothetical protein [Synechocystis sp. PCC
6803]
Length = 192
Score = 60.5 bits (145), Expect = 3e-08
Identities = 40/132 (30%), Positives = 69/132 (51%), Gaps = 8/132 (6%)
Query: 106 DLGTFEDFIQKNQAPILIEIGFGSGRHLIELAKNNPTKTCLGIEIHTPSIAQALKQIELL 165
D T D +Q+ P+ ++IG GR +++A+ +P LG+EI P + +A + + L
Sbjct: 6 DWATVYDDVQR---PLHLDIGCARGRFPLKMAQQHPDWNFLGVEIRQPLVLEANETGDRL 62
Query: 166 DLKNLHILQGDGRLVLE---SMPNHRCEKIFVHFPVPWNEKKH--RRVLSEKFLNEALRV 220
LKNLH L G+ + E S +++ + FP PW +++H RRV + +
Sbjct: 63 GLKNLHYLFGNINVEPEKFFSAFPPTLQRVSIQFPDPWFKQRHNKRRVAQPELVTAIANA 122
Query: 221 LKPRGFLELRTD 232
L P G + L++D
Sbjct: 123 LPPGGEVLLQSD 134
>sp|Q9KWZ4|MT04_STAAU Hypothetical methyltransferase
emb|CAB82477.1| (Y14816) hypothetical protein [Staphylococcus aureus]
Length = 214
Score = 60.1 bits (144), Expect = 4e-08
Identities = 40/137 (29%), Positives = 67/137 (48%), Gaps = 3/137 (2%)
Query: 108 GTFEDFIQKNQAPILIEIGFGSGRHLIELAKNNPTKTCLGIEIHTPSIAQALKQIELLDL 167
G ++ K Q PI IEIG G G+ + LA NP + +E + + L +++ + L
Sbjct: 28 GKMTEWFDKTQ-PIHIEIGSGMGQFITTLAAQNPHINYISMEREKSIVYKVLDKVKEMGL 86
Query: 168 KNLHILQGDGRLVLESMPNHRCEKIFVHFPVPWNEKKH--RRVLSEKFLNEALRVLKPRG 225
NL I+ D + E + +I+++F PW + +H RR+ FL ++L G
Sbjct: 87 TNLKIICNDAIELNEYFKDGEVSRIYLNFSDPWPKNRHAKRRLTYHTFLALYQQILNDEG 146
Query: 226 FLELRTDDSLYFEDSLK 242
L +TD+ F SL+
Sbjct: 147 DLHFKTDNRGLFAYSLE 163
>ref|NP_372272.1| (NC_002758) conserved hypothetical protein [Staphylococcus aureus
subsp. aureus Mu50]
ref|NP_374858.1| (NC_002745) conserved hypothetical protein [Staphylococcus aureus
subsp. aureus N315]
dbj|BAB42837.1| (AP003134) conserved hypothetical protein [Staphylococcus aureus
subsp. aureus N315]
dbj|BAB57910.1| (AP003363) conserved hypothetical protein [Staphylococcus aureus
subsp. aureus Mu50]
Length = 214
Score = 60.1 bits (144), Expect = 4e-08
Identities = 40/137 (29%), Positives = 67/137 (48%), Gaps = 3/137 (2%)
Query: 108 GTFEDFIQKNQAPILIEIGFGSGRHLIELAKNNPTKTCLGIEIHTPSIAQALKQIELLDL 167
G ++ K Q PI IEIG G G+ + LA NP + +E + + L +++ + L
Sbjct: 28 GEMTEWFDKTQ-PIHIEIGSGMGQFITTLAAQNPHINYISMEREKSIVYKVLDKVKEMGL 86
Query: 168 KNLHILQGDGRLVLESMPNHRCEKIFVHFPVPWNEKKH--RRVLSEKFLNEALRVLKPRG 225
NL I+ D + E + +I+++F PW + +H RR+ FL ++L G
Sbjct: 87 TNLKIICNDAIELNEYFKDGEVSRIYLNFSDPWPKNRHAKRRLTYHTFLALYQQILNDEG 146
Query: 226 FLELRTDDSLYFEDSLK 242
L +TD+ F SL+
Sbjct: 147 DLHFKTDNRGLFAYSLE 163
>ref|NP_296595.1| (NC_002620) conserved hypothetical protein [Chlamydia muridarum]
sp|Q9PL91|MT04_CHLMU Hypothetical methyltransferase TC0216
pir||F81726 conserved hypothetical protein TC0216 [imported] - Chlamydia
muridarum (strain Nigg)
gb|AAF39088.1| (AE002289) conserved hypothetical protein [Chlamydia muridarum]
Length = 224
Score = 55.8 bits (133), Expect = 8e-07
Identities = 35/132 (26%), Positives = 68/132 (51%), Gaps = 3/132 (2%)
Query: 117 NQAPILIEIGFGSGRHLIELAKNNPTKTCLGIEIHTPSIAQALKQIELLDLKNLHILQGD 176
N+ P+ E+ G+G ++E A + + + +E + + ++ + NL I+ G+
Sbjct: 47 NEGPVCCELCSGNGDWVVEQALKDTSINWIAVEKRFDRVRKIWSKMSNHKVNNLLIVCGE 106
Query: 177 GRLVLES-MPNHRCEKIFVHFPVPWNEKKHR--RVLSEKFLNEALRVLKPRGFLELRTDD 233
+ + + +KI V+FP PW + +HR R+ + F+ + +RVL G L L TDD
Sbjct: 107 AQTFFTHYVTDASFQKIVVNFPDPWPKFRHRKHRLFQDVFVQDMVRVLVEGGQLTLVTDD 166
Query: 234 SLYFEDSLKLAL 245
Y +S+++ L
Sbjct: 167 HTYLTNSIQVML 178
>ref|NP_485885.1| (NC_003272) hypothetical protein [Nostoc sp. PCC 7120]
dbj|BAB73544.1| (AP003587) ORF_ID:alr1845~hypothetical protein [Nostoc sp. PCC
7120]
Length = 219
Score = 55.1 bits (131), Expect = 1e-06
Identities = 33/119 (27%), Positives = 62/119 (51%), Gaps = 6/119 (5%)
Query: 120 PILIEIGFGSGRHLIELAKNNPTKTCLGIEIHTPSIAQALKQIELLDLKNLHILQGDG-- 177
P+ ++IG GR ++++A+ P LG+EI + +A + L L NLH L +
Sbjct: 43 PLHLDIGCARGRFVLQMAQVEPNWNFLGLEIRESLVIEANQFRSQLGLTNLHYLYCNANN 102
Query: 178 --RLVLESMPNHRCEKIFVHFPVPWNEKKH--RRVLSEKFLNEALRVLKPRGFLELRTD 232
+ +L S+P +++ + FP PW + +H RRV+ + + + L G + L++D
Sbjct: 103 SLQPLLSSLPTGILQRVTIQFPDPWFKTRHAKRRVVQPELVQDIANYLAVGGVVFLQSD 161
>dbj|BAB09565.1| (AB006706) gb|AAB08476.1~gene_id:MVA3.1~similar to unknown protein
[Arabidopsis thaliana]
Length = 280
Score = 54.7 bits (130), Expect = 2e-06
Identities = 38/144 (26%), Positives = 74/144 (51%), Gaps = 6/144 (4%)
Query: 95 NSKHASGKKTLDLGTFEDFIQKNQAPILIEIGFGSGRHLI-ELAKNNPTKTCLGIEIHTP 153
N +S K + +++ + P++++IG GSGR L+ + KN ++ LG+EI
Sbjct: 69 NPLSSSFSKPAPVPVWDEVYKDPSLPLMVDIGSGSGRFLLWQANKNVESRNYLGLEIRQK 128
Query: 154 SIAQALKQIELLDLKNLHILQGDGRLVLESMPNH---RCEKIFVHFPVPWNEKKH--RRV 208
+ +A + L L N+H + + + E + + E + + P P +K+H RRV
Sbjct: 129 LVKRANFWVNELGLSNVHFIFANAMVSFEHLISSYPGPLEIVSILCPDPHFKKRHQKRRV 188
Query: 209 LSEKFLNEALRVLKPRGFLELRTD 232
+ + +N L+ LKP G + +++D
Sbjct: 189 VQKPLVNSILQNLKPGGKIFVQSD 212
>ref|NP_568355.1| (NM_121772) putative protein [Arabidopsis thaliana]
gb|AAM67168.1| (AY088862) unknown [Arabidopsis thaliana]
Length = 312
Score = 54.7 bits (130), Expect = 2e-06
Identities = 38/144 (26%), Positives = 74/144 (51%), Gaps = 6/144 (4%)
Query: 95 NSKHASGKKTLDLGTFEDFIQKNQAPILIEIGFGSGRHLI-ELAKNNPTKTCLGIEIHTP 153
N +S K + +++ + P++++IG GSGR L+ + KN ++ LG+EI
Sbjct: 101 NPLSSSFSKPAPVPVWDEVYKDPSLPLMVDIGSGSGRFLLWQANKNVESRNYLGLEIRQK 160
Query: 154 SIAQALKQIELLDLKNLHILQGDGRLVLESMPNH---RCEKIFVHFPVPWNEKKH--RRV 208
+ +A + L L N+H + + + E + + E + + P P +K+H RRV
Sbjct: 161 LVKRANFWVNELGLSNVHFIFANAMVSFEHLISSYPGPLEIVSILCPDPHFKKRHQKRRV 220
Query: 209 LSEKFLNEALRVLKPRGFLELRTD 232
+ + +N L+ LKP G + +++D
Sbjct: 221 VQKPLVNSILQNLKPGGKIFVQSD 244
>ref|NP_214722.1| (NC_000962) hypothetical protein Rv0208c [Mycobacterium
tuberculosis H37Rv]
ref|NP_334625.1| (NC_002755) conserved hypothetical protein [Mycobacterium
tuberculosis CDC1551]
sp|P96390|MT04_MYCTU Hypothetical methyltransferase Rv0208c
pir||F70959 hypothetical protein Rv0208c - Mycobacterium tuberculosis (strain
H37RV)
emb|CAB07003.1| (Z92669) hypothetical protein Rv0208c [Mycobacterium tuberculosis
H37Rv]
gb|AAK44439.1| (AE006931) conserved hypothetical protein [Mycobacterium
tuberculosis CDC1551]
Length = 263
Score = 54.3 bits (129), Expect = 2e-06
Identities = 39/126 (30%), Positives = 64/126 (49%), Gaps = 7/126 (5%)
Query: 119 APILIEIGFGSGRHLIELAKNNPTKTCLGIEIHTPSIAQALKQIELL--DLKNLHILQGD 176
AP+++EIG GSG + +AK P + ++++ +AQ L I+ + D N+ ++ G+
Sbjct: 77 APVVLEIGSGSGTSTLAMAKAEPHVDVIAVDVYRRGLAQLLCAIDKVGSDGINIRLILGN 136
Query: 177 GRLVLESM--PNHRCEKIFVHFPVPWNEKKH--RRVLSEKFLNEALRVLKPRGFLELRTD 232
VL+ + P+ C + V FP PW + +H RR+L + L P G L TD
Sbjct: 137 AVDVLQHLIAPDSLC-GVRVFFPDPWPKARHHKRRLLQPATMALIADRLVPSGVLHAATD 195
Query: 233 DSLYFE 238
Y E
Sbjct: 196 HPGYAE 201
>ref|NP_220350.1| (NC_000117) rRNA Methylase (possible) [Chlamydia trachomatis]
pir||E71464 probable rRNA methylase - Chlamydia trachomatis (serotype D, strain
UW3/Cx)
gb|AAC68426.1| (AE001356) rRNA Methylase (possible) [Chlamydia trachomatis]
Length = 187
Score = 53.9 bits (128), Expect = 3e-06
Identities = 40/157 (25%), Positives = 72/157 (45%), Gaps = 5/157 (3%)
Query: 117 NQAPILIEIGFGSGRHLIELAKNNPTKTCLGIEIHTPSIAQALKQIELLDLKNLHILQGD 176
N PI E+ G+G ++E A + + + +E + + ++ + NL I+ G+
Sbjct: 10 NNGPICCELCSGNGDWVVEQALKDASVNWIAVEKRFDRVRKIWSKMGNYRVNNLLIVCGE 69
Query: 177 GRLVLES-MPNHRCEKIFVHFPVPWNEKKHR--RVLSEKFLNEALRVLKPRGFLELRTDD 233
+ + + +KI V+FP PW + +HR R+ + F+ + +R L G L L TDD
Sbjct: 70 AQTFFSHYVSDASFQKIVVNFPDPWPKFRHRKHRLFQDLFVQDMMRTLVVGGQLTLATDD 129
Query: 234 SLYFEDSLKLALKNFQCEIEIKKNAQIPVVSKYEARW 270
Y +++ + LK +K I V Y W
Sbjct: 130 YNYLVNAITVMLK--YLSPGLKSPHYINVKDNYGGSW 164
>sp|O84836|MT04_CHLTR Hypothetical methyltransferase CT829
Length = 224
Score = 53.9 bits (128), Expect = 3e-06
Identities = 40/157 (25%), Positives = 72/157 (45%), Gaps = 5/157 (3%)
Query: 117 NQAPILIEIGFGSGRHLIELAKNNPTKTCLGIEIHTPSIAQALKQIELLDLKNLHILQGD 176
N PI E+ G+G ++E A + + + +E + + ++ + NL I+ G+
Sbjct: 47 NNGPICCELCSGNGDWVVEQALKDASVNWIAVEKRFDRVRKIWSKMGNYRVNNLLIVCGE 106
Query: 177 GRLVLES-MPNHRCEKIFVHFPVPWNEKKHR--RVLSEKFLNEALRVLKPRGFLELRTDD 233
+ + + +KI V+FP PW + +HR R+ + F+ + +R L G L L TDD
Sbjct: 107 AQTFFSHYVSDASFQKIVVNFPDPWPKFRHRKHRLFQDLFVQDMMRTLVVGGQLTLATDD 166
Query: 234 SLYFEDSLKLALKNFQCEIEIKKNAQIPVVSKYEARW 270
Y +++ + LK +K I V Y W
Sbjct: 167 YNYLVNAITVMLK--YLSPGLKSPHYINVKDNYGGSW 201
>sp|P72546|MT04_SYNP7 Hypothetical methyltransferase DC13
gb|AAB08476.1| (U62616) putative protein [Synechococcus sp. PCC 7942]
Length = 213
Score = 53.9 bits (128), Expect = 3e-06
Identities = 36/112 (32%), Positives = 57/112 (50%), Gaps = 7/112 (6%)
Query: 120 PILIEIGFGSGRHLIELAKNNPTKTCLGIEIHTPSIAQALKQIELLDLKNLHILQGDGRL 179
P+ ++IG GR L+ +A P LG+EI P + +A +L NL+ + L
Sbjct: 36 PLHLDIGCARGRFLLAMATRQPEWNYLGLEIREPLVDEANAIARERELTNLYYHFSNANL 95
Query: 180 VLE----SMPNHRCEKIFVHFPVPWNEKKH--RRVLSEKFLNEALRVLKPRG 225
LE S+P +++ + FP PW +K+H RRV+ + L +AL P G
Sbjct: 96 DLEPLLRSLPTGILQRVSIQFPDPWFKKRHQKRRVVQPE-LVQALATALPAG 146
>ref|NP_225180.1| (NC_000922) predicted rRNA Methylase [Chlamydophila pneumoniae
CWL029]
ref|NP_301041.1| (NC_002491) rRNA methylase [Chlamydophila pneumoniae J138]
ref|NP_445407.1| (NC_002179) conserved hypothetical protein [Chlamydophila
pneumoniae AR39]
sp|Q9Z6S3|MT04_CHLPN Hypothetical methyltransferase CPn0986/CP0869/CPj0986
pir||C72010 conserved hypothetical protein CP0869 [imported] - Chlamydophila
pneumoniae (strains CWL029 and AR39)
gb|AAD19123.1| (AE001679) predicted rRNA Methylase [Chlamydophila pneumoniae
CWL029]
gb|AAF38658.1| (AE002245) conserved hypothetical protein [Chlamydophila pneumoniae
AR39]
dbj|BAA99193.1| (AP002548) rRNA methylase [Chlamydophila pneumoniae J138]
Length = 224
Score = 53.9 bits (128), Expect = 3e-06
Identities = 34/135 (25%), Positives = 66/135 (48%), Gaps = 4/135 (2%)
Query: 111 EDFIQKNQAPILIEIGFGSGRHLIELAKNNPTKTCLGIEIHTPSIAQALKQIELLDLKNL 170
++F Q N I E+ G+G ++ A+ +P + +E + + ++ ++NL
Sbjct: 42 QEFFQ-NHTSIACELCSGNGDWVVAQAQKDPQVLWIAVEQRFDRVRKIWSKMINHQIQNL 100
Query: 171 HILQGDGRLVLES-MPNHRCEKIFVHFPVPWNEKKHR--RVLSEKFLNEALRVLKPRGFL 227
I+ G + +P+ +++ V+FP PW + +HR R+L F+ E R L+
Sbjct: 101 RIVCGTAETFFQYYVPDQFLQRLVVNFPDPWPKMRHRKHRLLQPSFVQEISRSLQDSAVF 160
Query: 228 ELRTDDSLYFEDSLK 242
L TDD Y +S++
Sbjct: 161 ALATDDKTYLLESIE 175
>ref|NP_561340.1| (NC_003366) conserved hypothetical protein [Clostridium
perfringens]
dbj|BAB80130.1| (AP003186) conserved hypothetical protein [Clostridium perfringens]
Length = 219
Score = 52.8 bits (125), Expect = 7e-06
Identities = 41/158 (25%), Positives = 75/158 (46%), Gaps = 16/158 (10%)
Query: 108 GTFEDFIQKNQAPILIEIGFGSGRHLIELAKNNPTKTCLGIEIHTPSIAQALKQIELL-- 165
G +++ + + PI +E+G G G + +NP + I+I + A + IE
Sbjct: 28 GNWKNTFKNTENPIYLELGCGKGTFMAVHGSDNPNINYIAIDIKDEVLVLAKRSIEKAYE 87
Query: 166 ----DLKNLHILQGDGRL---VLESMPNHRCEKIFVHFPVPWNEKKH--RRVLSEKFLNE 216
L N+ ++ + L +L+S N + E+I+++F PW + +H RR+ + L +
Sbjct: 88 EKNKALDNVKLMPQEIALIDTILDS--NDKIERIYINFCNPWPKDRHKKRRLTHTRQLTK 145
Query: 217 ALRVLKPRGFLELRTDDSLYFEDSLKLALKNFQCEIEI 254
L G + +TDD FE+SL+ +C EI
Sbjct: 146 YRDFLVDGGEIHFKTDDDELFEESLEYFK---ECNFEI 180
>ref|NP_302680.1| (NC_002677) conserved hypothetical protein [Mycobacterium leprae]
sp|Q9CCZ9|MT04_MYCLE Hypothetical methyltransferase ML2622
emb|CAC32154.1| (AL583926) conserved hypothetical protein [Mycobacterium leprae]
Length = 230
Score = 51.2 bits (121), Expect = 2e-05
Identities = 34/125 (27%), Positives = 60/125 (47%), Gaps = 3/125 (2%)
Query: 121 ILIEIGFGSGRHLIELAKNNPTKTCLGIEIHTPSIAQALKQIELLDLKNLHILQGDGRLV 180
+++E+G GSG + +A++ P + +E++ +AQ L I+ + N+ ++ G+ V
Sbjct: 58 VVLEVGCGSGTATLAMAQHEPDIDVIAVEVYRRGLAQLLCAIDRDQVHNIRMIHGNALYV 117
Query: 181 LESMPNHR-CEKIFVHFPVPWNEKKH--RRVLSEKFLNEALRVLKPRGFLELRTDDSLYF 237
L+ + R + V FP PW + +H RR L + L P G L TD Y
Sbjct: 118 LQYLIAPRSLTGVRVFFPDPWPKVRHHKRRFLQPATVELIADRLLPGGVLHTATDHPDYA 177
Query: 238 EDSLK 242
+ K
Sbjct: 178 KQIAK 182
>emb|CAB08804.1| (Z95398) unknown [Mycobacterium leprae]
Length = 279
Score = 51.2 bits (121), Expect = 2e-05
Identities = 34/125 (27%), Positives = 60/125 (47%), Gaps = 3/125 (2%)
Query: 121 ILIEIGFGSGRHLIELAKNNPTKTCLGIEIHTPSIAQALKQIELLDLKNLHILQGDGRLV 180
+++E+G GSG + +A++ P + +E++ +AQ L I+ + N+ ++ G+ V
Sbjct: 107 VVLEVGCGSGTATLAMAQHEPDIDVIAVEVYRRGLAQLLCAIDRDQVHNIRMIHGNALYV 166
Query: 181 LESMPNHR-CEKIFVHFPVPWNEKKH--RRVLSEKFLNEALRVLKPRGFLELRTDDSLYF 237
L+ + R + V FP PW + +H RR L + L P G L TD Y
Sbjct: 167 LQYLIAPRSLTGVRVFFPDPWPKVRHHKRRFLQPATVELIADRLLPGGVLHTATDHPDYA 226
Query: 238 EDSLK 242
+ K
Sbjct: 227 KQIAK 231
>ref|NP_586458.1| (NC_003237) similarity to HYPOTHETICAL METHYLTRANSFERASE-LIKE
PROTEIN YGGH_ECOLI [Encephalitozoon cuniculi]
emb|CAD26062.1| (AL590450) similarity to HYPOTHETICAL METHYLTRANSFERASE-LIKE
PROTEIN YGGH_ECOLI [Encephalitozoon cuniculi]
Length = 243
Score = 50.4 bits (119), Expect = 3e-05
Identities = 33/139 (23%), Positives = 68/139 (48%), Gaps = 3/139 (2%)
Query: 110 FEDFIQKNQAPILIEIGFGSGRHLIELAKNNPTKTCLGIEIHTPSIAQALKQIELLDLKN 169
+ + + N+ P ++IG G G+ L+++A+ NP + LG+EI +IE + N
Sbjct: 37 WSSYFRMNRRPDFVDIGCGYGKFLMKVAEKNPEHSILGLEIRDKVCEYVKARIEAAGIPN 96
Query: 170 LHILQGDGRLVLESM-PNHRCEKIFVHFPVPWNEKKHR--RVLSEKFLNEALRVLKPRGF 226
+++ + + L ++ + KIF+ FP P +K+ + R++ + + +L G
Sbjct: 97 AGVMRTNALIFLPNIFSRGQLTKIFILFPDPHFKKRKQKGRIVCRQMMEMYEYLLADGGK 156
Query: 227 LELRTDDSLYFEDSLKLAL 245
L + TD F ++ L
Sbjct: 157 LYISTDVKELFNCMMEAVL 175
>ref|NP_633973.1| (NC_003901) methyltransferase [Methanosarcina mazei Goe1]
gb|AAM31645.1| (AE013432) methyltransferase [Methanosarcina mazei Goe1]
Length = 266
Score = 47.8 bits (112), Expect = 2e-04
Identities = 40/138 (28%), Positives = 65/138 (46%), Gaps = 14/138 (10%)
Query: 122 LIEIGFGSGRHLIELAKNNPTKTCLGIEIHTPSIAQALKQIELLDLKNLHILQGDGRLVL 181
++E G G G + LAKNNP I+I S+ +A + E +KN+ LQ + +
Sbjct: 39 VLEAGCGIGAQTVILAKNNPDAEITSIDISPESLEKARENTEKNGIKNVKFLQAN----I 94
Query: 182 ESMP--NHRCEKIFVHFPVPWNEKKHRRVLSEKFLNEALRVLKPRGFLELRTDD--SLYF 237
S+P + + IFV F + + E+ L +VLKP G + + D S YF
Sbjct: 95 FSLPFEDSSFDHIFVCFVLEHLQS------PEEALKSLKKVLKPGGTITVIEGDHGSCYF 148
Query: 238 EDSLKLALKNFQCEIEIK 255
K A++ + C I ++
Sbjct: 149 HPEGKKAIEAWNCLIRVQ 166
>ref|NP_521916.1| (NC_003296) HYPOTHETICAL PROTEIN [Ralstonia solanacearum]
emb|CAD17506.1| (AL646078) HYPOTHETICAL PROTEIN [Ralstonia solanacearum]
Length = 246
Score = 45.1 bits (105), Expect = 0.001
Identities = 38/141 (26%), Positives = 64/141 (44%), Gaps = 11/141 (7%)
Query: 119 APILIEIGFGSGRHLIELAKNNPTKTCLGIEIHTPSIAQALKQIELLDLKNLHILQGDGR 178
AP++ ++G G G L + +GI+ H PS+A A KQ + +L GD
Sbjct: 55 APVIADVGCGQGISFRLLESAFAPQRMIGIDFHRPSLA-AAKQAAAALATPVDLLHGDCA 113
Query: 179 LVLESMPNHRCEKIFVHFPVPWNEKKHRRVLSEKFLNEALRVLKPRGFLELRTDDSLYFE 238
+ +P+ + +F H + H V ++ L E RVLKP G L +Y +
Sbjct: 114 AL--PLPDASVDMVFCH------QTFHHLVEQDRALAEFHRVLKPGGLLLFAESTEVYIK 165
Query: 239 DSLKLALKNFQCEIEIKKNAQ 259
+ L F+ + ++K+AQ
Sbjct: 166 SWVIRLL--FRHPMHVQKSAQ 184
>gb|EAA13331.1| (AAAB01008968) ebiP3460 [Anopheles gambiae str. PEST]
Length = 227
Score = 45.1 bits (105), Expect = 0.001
Identities = 35/128 (27%), Positives = 65/128 (50%), Gaps = 15/128 (11%)
Query: 117 NQAPILIEIGFGSGRHLIELAKNNPTKTCLGIEI------HTPSIAQALKQIELLDLKNL 170
N+ + +IG G G L+ L + P K +G+EI + +AL+Q +N+
Sbjct: 43 NRQVVFADIGCGYGGFLVTLGETFPDKLAIGMEIRVKVSDYVMDRIKALRQRHKGKYENI 102
Query: 171 HILQGDGRLVLESMPN----HRCEKIFVHFPVP-WNEKKHR-RVLSEKFLNEALRVLKPR 224
++ + ++ +PN H+ EK+F +P P + + KH+ R+++ L+E VL+P
Sbjct: 103 ACIRTN---AMKYLPNYFRKHQLEKLFFLYPDPHFKKAKHKWRIINPTLLSEYAYVLRPG 159
Query: 225 GFLELRTD 232
G + TD
Sbjct: 160 GKIYTVTD 167
Database: /home/scwang/download_20020708_db/nr
Posted date: Aug 7, 2002 12:55 PM
Number of letters in database: 324,149,939
Number of sequences in database: 1,026,957
Lambda K H
0.322 0.140 0.413
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 247,725,759
Number of Sequences: 1026957
Number of extensions: 10387650
Number of successful extensions: 24126
Number of sequences better than 1.0e-02: 73
Number of HSP's better than 0.0 without gapping: 50
Number of HSP's successfully gapped in prelim test: 23
Number of HSP's that attempted gapping in prelim test: 23986
Number of HSP's gapped (non-prelim): 79
length of query: 393
length of database: 324,149,939
effective HSP length: 123
effective length of query: 270
effective length of database: 197,834,228
effective search space: 53415241560
effective search space used: 53415241560
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 98 (42.4 bits)