BLASTP 2.2.1 [Apr-13-2001]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|15645379|ref|NP_207553.1| conserved hypothetical
protein [Helicobacter pylori 26695]
(462 letters)
Database: /home/scwang/download_20020708_db/nr
1,026,957 sequences; 324,149,939 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_207553.1| (NC_000915) conserved hypothetical protein... 894 0.0
sp|O25455|Y760_HELPY Hypothetical protein HP0760 866 0.0
ref|NP_223415.1| (NC_000921) putative [Helicobacter pylori ... 847 0.0
ref|NP_282356.1| (NC_002163) hypothetical protein Cj1209 [C... 394 e-109
ref|NP_214188.1| (NC_000918) hypothetical protein [Aquifex ... 338 1e-91
ref|NP_622990.1| (NC_003869) predicted HD superfamily hydro... 332 4e-90
ref|NP_562588.1| (NC_003366) conserved hypothetical protein... 331 1e-89
ref|NP_229653.1| (NC_000853) conserved hypothetical protein... 330 3e-89
ref|NP_243244.1| (NC_002570) BH2378~unknown conserved prote... 328 6e-89
ref|NP_348441.1| (NC_003030) HD superfamily hydrolase, YMDA... 328 1e-88
ref|NP_470772.1| (NC_003212) similar to unknown protein [Li... 324 1e-87
ref|NP_389578.1| (NC_000964) similar to hypothetical protei... 322 8e-87
ref|NP_359176.1| (NC_003098) Conserved hypothetical protein... 319 4e-86
ref|NP_346175.1| (NC_003028) KH domain protein [Streptococc... 319 4e-86
ref|NP_657744.1| (NC_003995) HD, HD domain [Bacillus anthra... 315 7e-85
ref|NP_602713.1| (NC_003454) hydrolase (HD superfamily) [Fu... 313 4e-84
ref|NP_371810.1| (NC_002758) conserved hypothetical protein... 311 1e-83
ref|NP_607693.1| (NC_003485) conserved hypothetical protein... 308 7e-83
ref|NP_269682.1| (NC_002737) conserved hypothetical protein... 308 7e-83
ref|NP_268057.1| (NC_002662) HYPOTHETICAL PROTEIN [Lactococ... 303 4e-81
ref|NP_219455.1| (NC_000919) conserved hypothetical protein... 295 8e-79
ref|NP_296182.1| (NC_001263) conserved hypothetical protein... 290 2e-77
ref|NP_212638.1| (NC_001318) conserved hypothetical protein... 278 1e-73
ref|NP_661629.1| (NC_002932) conserved hypothetical protein... 274 1e-72
sp|Q01444|YFF1_MYCMY Hypothetical protein in ffh 5'region >... 270 3e-71
pir||S27590 hypothetical protein 1 - Mycoplasma mycoides (S... 270 3e-71
gb|AAK00328.1|AF320250_1 (AF320250) YmdA [Lactobacillus del... 221 1e-56
ref|NP_077915.1| (NC_002162) conserved hypothetical [Ureapl... 199 7e-50
gb|AAM34643.1| (AF495587) unknown [Leptospira interrogans] 150 4e-35
ref|NP_109957.1| (NC_000912) nucleotide binding protein [My... 76 7e-13
ref|NP_072792.1| (NC_000908) conserved hypothetical protein... 71 2e-11
ref|NP_404736.1| (NC_003143) TolA colicin import membrane p... 54 5e-06
ref|NP_084759.1| (NC_002693) Ycf1 protein [Oenothera elata ... 54 5e-06
ref|NP_071796.1| (NM_022401) plectin [Rattus norvegicus] >g... 52 1e-05
ref|XP_115620.1| (XM_115620) similar to trichohyalin [Homo ... 51 3e-05
ref|NP_614988.1| (NC_003552) chemotaxis sensor histidine ki... 51 3e-05
ref|NP_000436.1| (NM_000445) plectin 1, intermediate filame... 50 4e-05
ref|NP_142454.1| (NC_000961) hypothetical protein [Pyrococc... 50 7e-05
dbj|BAA36703.2| (AB016537) M23 [Streptococcus pyogenes] 49 1e-04
dbj|BAB07943.1| (AP002487) putative eukaryotic translation ... 48 2e-04
ref|NP_228975.1| (NC_000853) ABC transporter, periplasmic s... 48 3e-04
ref|NP_213438.1| (NC_000918) chromosome assembly protein ho... 48 3e-04
sp|Q15149|PLE1_HUMAN Plectin 1 (PLTN) (PCN) (Hemidesmosomal... 48 3e-04
ref|NP_654492.1| (NC_003995) Band_7, SPFH domain / Band 7 f... 47 4e-04
ref|NP_072785.1| (NC_000908) conserved hypothetical protein... 47 5e-04
ref|NP_497706.1| (NM_065305) F59A2.6.p [Caenorhabditis eleg... 47 5e-04
sp|P13050|ARP4_STRPY IgA receptor precursor >gi|80035|pir||... 47 5e-04
ref|NP_394389.1| (NC_002578) conserved hypothetical protein... 47 6e-04
ref|NP_653321.1| (NM_144720) hypothetical protein FLJ31564 ... 46 8e-04
gb|AAK19244.1|AF312916_1 (AF312916) reticulocyte binding pr... 46 8e-04
ref|NP_247879.1| (NC_000909) activator 1 (replication facto... 46 8e-04
gb|AAA72295.1| (L04159) [Plasmodium falciparum 3' end.], ge... 46 8e-04
ref|XP_087524.4| (XM_087524) similar to Hypothetical protei... 46 8e-04
ref|NP_572129.1| (NC_003409) ORF 73; extensive acidic domai... 46 0.001
gb|AAC27083.2| (AF077666) M protein [Streptococcus pyogenes] 46 0.001
gb|AAL86704.1|AF481861_1 (AF481861) Mnn4p [Candida albicans] 46 0.001
sp|Q9JI55|PLE1_CRIGR Plectin 1 (PLTN) (PCN) (300-kDa interm... 45 0.001
ref|NP_051373.1| (NC_000952) ErpM [Borrelia burgdorferi] >g... 45 0.001
gb|AAL92974.1| (AC116028) putative protein potential transc... 45 0.001
ref|NP_326110.1| (NC_002771) conserved hypothetical protein... 45 0.002
ref|NP_609398.1| (NM_135554) Klp31E gene product [Drosophil... 45 0.002
ref|NP_245905.1| (NC_002663) TolA [Pasteurella multocida] >... 45 0.002
pir||T32297 hypothetical protein M151.4 - Caenorhabditis el... 45 0.002
ref|NP_494598.1| (NM_062197) M151.4.p [Caenorhabditis elega... 45 0.002
gb|AAL10509.1| (AY042084) maebl [Plasmodium falciparum] 45 0.002
ref|NP_594568.1| (NC_003424) hypothetical coiled-coil prote... 45 0.002
pir||PH0139 M protein-like molecule class II - Streptococcu... 45 0.002
ref|NP_062079.1| (NM_019206) serine/threonine kinase 10 [Ra... 44 0.003
gb|AAB62657.1| (U93872) ORF 73, contains large complex repe... 44 0.003
pir||S43554 plasminogen-binding protein MLG72 - Streptococc... 44 0.003
pir||S37046 IgA receptor - Streptococcus pyogenes >gi|39762... 44 0.003
gb|AAK50002.1| (AF360120) ORF73 [Human herpesvirus 8] 44 0.003
gb|AAD46501.1|AF148805_6 (AF148805) latent nuclear antigen ... 44 0.003
ref|NP_613509.1| (NC_003551) TOPRIM-domain-containing prote... 44 0.004
sp|P16947|M49_STRPY M protein, serotype 49 precursor >gi|28... 44 0.004
ref|NP_172024.1| (NM_100411) unknown protein [Arabidopsis t... 44 0.004
ref|NP_005981.1| (NM_005990) serine/threonine kinase 10 [Ho... 44 0.004
ref|NP_149129.1| (NM_033138) caldesmon 1, isoform 1; L-CAD;... 44 0.004
sp|P22793|TRHY_SHEEP Trichohyalin >gi|423321|pir||A40691 tr... 44 0.004
ref|XP_147228.1| (XM_147228) myosin heavy chain 11, smooth ... 44 0.005
ref|NP_126901.1| (NC_000868) purine NTPase, putative [Pyroc... 44 0.005
pir||A41604 myosin heavy chain, smooth muscle, long splice ... 44 0.005
ref|NP_505094.1| (NM_072693) myosin [Caenorhabditis elegans... 44 0.005
gb|AAB06613.1| (U52008) Emm50 [Streptococcus pyogenes] 44 0.005
ref|XP_005341.2| (XM_005341) centrosomal protein 1 [Homo sa... 44 0.005
dbj|BAB00616.1| (AB036839) ezrin/radixin/moesin (ERM)-like ... 44 0.005
gb|AAH26142.1| (BC026142) Unknown (protein for MGC:13920) [... 44 0.005
gb|AAF73784.1|AF154016_1 (AF154016) surface protein PspC [S... 44 0.005
sp|P35748|MYHB_RABIT Myosin heavy chain, smooth muscle isof... 44 0.005
gb|AAG01636.1| (AF192756) Orf73 [Human herpesvirus 8] 44 0.005
gb|EAA05211.1| (AAAB01008816) agCP6917 [Anopheles gambiae s... 44 0.005
emb|CAC12741.1| (AJ005004) intermediate filament protein [G... 44 0.005
dbj|BAB84905.1| (AK074079) FLJ00150 protein [Homo sapiens] 44 0.005
ref|NP_011646.1| (NC_001139) Hypothetical ORF; Ygr130cp [Sa... 43 0.007
pir||S54871 M protein - Streptococcus sp >gi|840906|emb|CAA... 43 0.007
gb|AAF35343.1|AF222860_1 (AF222860) M protein precursor [St... 43 0.007
gb|AAM34362.1| (AC117082) fimbrin [Dictyostelium discoideum] 43 0.007
pir||A59235 unconventional myosin heavy chain MyoM - slime ... 43 0.007
gb|AAG49577.1| (AF322916) uveal autoantigen [Homo sapiens] 43 0.007
emb|CAD21337.1| (AL670008) conserved hypothetical protein [... 43 0.007
gb|AAG27458.1|AF305694_1 (AF305694) latent nuclear antigen ... 43 0.007
ref|NP_032471.1| (NM_008445) kinesin family member 3c [Mus ... 43 0.007
gb|AAF86217.1|AF242196_3 (AF242196) SagA [Enterococcus faec... 43 0.007
ref|XP_051463.2| (XM_051463) uveal autoantigen with coiled ... 43 0.007
ref|NP_014308.1| (NC_001146) Negative affector of 43 0.007
ref|NP_509801.1| (NM_077400) Transthyretin-like family [Cae... 43 0.007
gb|AAK02014.1|AF126831_1 (AF126831) enterophilin-2L [Cavia ... 43 0.007
pir||JX0178 myosin heavy chain, fast skeletal muscle, adult... 43 0.007
sp|P13538|MYSS_CHICK Myosin heavy chain, skeletal muscle, a... 43 0.007
gb|AAG49576.1| (AF322915) uveal autoantigen [Bos taurus] 43 0.007
pir||T09127 probable erythrocyte-binding protein MAEBL - Pl... 43 0.007
sp|P13540|MYH7_MESAU Myosin heavy chain, cardiac muscle bet... 43 0.009
emb|CAB63561.1| (AL031746) hypothetical garp protein [Plasm... 43 0.009
ref|XP_122199.1| (XM_122199) similar to Serine/threonine-pr... 43 0.009
sp|P08799|MYS2_DICDI Myosin II heavy chain, non muscle >gi|... 43 0.009
ref|NP_111590.1| (NC_002689) Predicted hydrolase (HD superf... 43 0.009
ref|NP_033314.1| (NM_009288) serine/threonine kinase 10 [Mu... 43 0.009
pir||A59282 nonmuscle myosin II heavy chain A - African cla... 43 0.009
pir||S49550 M-like protein emmL9 - Streptococcus pyogenes (... 43 0.009
emb|CAC01956.2| (AL390114) probable hypothetical 22.1 Kd pr... 43 0.009
pir||S05515 myosin heavy chain, skeletal muscle - chicken (... 43 0.009
ref|NP_586080.1| (NC_003234) similarity to ribosomal protei... 43 0.009
pir||S03166 myosin heavy chain, gizzard smooth muscle [simi... 43 0.009
ref|NP_005954.2| (NM_005963) myosin, heavy polypeptide 1, s... 43 0.009
ref|NP_178048.1| (NM_106578) hypothetical protein [Arabidop... 43 0.009
sp|P13816|GARP_PLAFF GLUTAMIC ACID-RICH PROTEIN PRECURSOR >... 43 0.009
ref|NP_602741.1| (NC_003454) ClpB protein [Fusobacterium nu... 43 0.009
ref|XP_052590.1| (XM_052590) similar to Myosin heavy chain,... 43 0.009
ref|NP_213137.1| (NC_000918) putative protein [Aquifex aeol... 43 0.009
sp|P10587|MYHB_CHICK Myosin heavy chain, gizzard smooth muscle 43 0.009
>ref|NP_207553.1| (NC_000915) conserved hypothetical protein [Helicobacter pylori
26695]
pir||H64614 conserved hypothetical protein HP0760 - Helicobacter pylori
(strain 26695)
gb|AAD07808.1| (AE000588) conserved hypothetical protein [Helicobacter pylori
26695]
Length = 462
Score = 894 bits (2310), Expect = 0.0
Identities = 462/462 (100%), Positives = 462/462 (100%)
Query: 1 MQIATAIWKTRIWQLQTHFDKKEAHLKHLEAQHKEFVRDEKRYLEKEKKELEKERQILEQ 60
MQIATAIWKTRIWQLQTHFDKKEAHLKHLEAQHKEFVRDEKRYLEKEKKELEKERQILEQ
Sbjct: 1 MQIATAIWKTRIWQLQTHFDKKEAHLKHLEAQHKEFVRDEKRYLEKEKKELEKERQILEQ 60
Query: 61 EKENFKKQRAVCKESQAKALDAMLNYMAYTKDEIKSMILEQLEEELEAQKSALIRRYEKE 120
EKENFKKQRAVCKESQAKALDAMLNYMAYTKDEIKSMILEQLEEELEAQKSALIRRYEKE
Sbjct: 61 EKENFKKQRAVCKESQAKALDAMLNYMAYTKDEIKSMILEQLEEELEAQKSALIRRYEKE 120
Query: 121 AKEEGKKKSYAILAEATARFAGNYAAENLTTRIALPCSDYIGRVIGKDGKNIEAFKKVSG 180
AKEEGKKKSYAILAEATARFAGNYAAENLTTRIALPCSDYIGRVIGKDGKNIEAFKKVSG
Sbjct: 121 AKEEGKKKSYAILAEATARFAGNYAAENLTTRIALPCSDYIGRVIGKDGKNIEAFKKVSG 180
Query: 181 VDIEFSEDSSELCLSSFNLYRREVASETLKILIEDGRIQPNRIEEVYHRVARNLEKELLS 240
VDIEFSEDSSELCLSSFNLYRREVASETLKILIEDGRIQPNRIEEVYHRVARNLEKELLS
Sbjct: 181 VDIEFSEDSSELCLSSFNLYRREVASETLKILIEDGRIQPNRIEEVYHRVARNLEKELLS 240
Query: 241 EGESVVLELELGAMEDELKILIGKMRYRSSFGQNALQHSKEVALLAGLIAEQLGGDKKLA 300
EGESVVLELELGAMEDELKILIGKMRYRSSFGQNALQHSKEVALLAGLIAEQLGGDKKLA
Sbjct: 241 EGESVVLELELGAMEDELKILIGKMRYRSSFGQNALQHSKEVALLAGLIAEQLGGDKKLA 300
Query: 301 RRAGILHDIGKALTQELGRDHVNLGVEVCKRHKEDPVVINAIYAHHGHEEILSVECASVC 360
RRAGILHDIGKALTQELGRDHVNLGVEVCKRHKEDPVVINAIYAHHGHEEILSVECASVC
Sbjct: 301 RRAGILHDIGKALTQELGRDHVNLGVEVCKRHKEDPVVINAIYAHHGHEEILSVECASVC 360
Query: 361 AADALSAGRPGARRKSDEEYAKRMQALEEIALEFDGVEKAYAMESGRELRVIVKSNQVRD 420
AADALSAGRPGARRKSDEEYAKRMQALEEIALEFDGVEKAYAMESGRELRVIVKSNQVRD
Sbjct: 361 AADALSAGRPGARRKSDEEYAKRMQALEEIALEFDGVEKAYAMESGRELRVIVKSNQVRD 420
Query: 421 NQVPIIARKIAKKIEESAQYVGEVGVQVVRESRFKTTATLKQ 462
NQVPIIARKIAKKIEESAQYVGEVGVQVVRESRFKTTATLKQ
Sbjct: 421 NQVPIIARKIAKKIEESAQYVGEVGVQVVRESRFKTTATLKQ 462
>sp|O25455|Y760_HELPY Hypothetical protein HP0760
Length = 529
Score = 866 bits (2238), Expect = 0.0
Identities = 449/449 (100%), Positives = 449/449 (100%)
Query: 14 QLQTHFDKKEAHLKHLEAQHKEFVRDEKRYLEKEKKELEKERQILEQEKENFKKQRAVCK 73
QLQTHFDKKEAHLKHLEAQHKEFVRDEKRYLEKEKKELEKERQILEQEKENFKKQRAVCK
Sbjct: 81 QLQTHFDKKEAHLKHLEAQHKEFVRDEKRYLEKEKKELEKERQILEQEKENFKKQRAVCK 140
Query: 74 ESQAKALDAMLNYMAYTKDEIKSMILEQLEEELEAQKSALIRRYEKEAKEEGKKKSYAIL 133
ESQAKALDAMLNYMAYTKDEIKSMILEQLEEELEAQKSALIRRYEKEAKEEGKKKSYAIL
Sbjct: 141 ESQAKALDAMLNYMAYTKDEIKSMILEQLEEELEAQKSALIRRYEKEAKEEGKKKSYAIL 200
Query: 134 AEATARFAGNYAAENLTTRIALPCSDYIGRVIGKDGKNIEAFKKVSGVDIEFSEDSSELC 193
AEATARFAGNYAAENLTTRIALPCSDYIGRVIGKDGKNIEAFKKVSGVDIEFSEDSSELC
Sbjct: 201 AEATARFAGNYAAENLTTRIALPCSDYIGRVIGKDGKNIEAFKKVSGVDIEFSEDSSELC 260
Query: 194 LSSFNLYRREVASETLKILIEDGRIQPNRIEEVYHRVARNLEKELLSEGESVVLELELGA 253
LSSFNLYRREVASETLKILIEDGRIQPNRIEEVYHRVARNLEKELLSEGESVVLELELGA
Sbjct: 261 LSSFNLYRREVASETLKILIEDGRIQPNRIEEVYHRVARNLEKELLSEGESVVLELELGA 320
Query: 254 MEDELKILIGKMRYRSSFGQNALQHSKEVALLAGLIAEQLGGDKKLARRAGILHDIGKAL 313
MEDELKILIGKMRYRSSFGQNALQHSKEVALLAGLIAEQLGGDKKLARRAGILHDIGKAL
Sbjct: 321 MEDELKILIGKMRYRSSFGQNALQHSKEVALLAGLIAEQLGGDKKLARRAGILHDIGKAL 380
Query: 314 TQELGRDHVNLGVEVCKRHKEDPVVINAIYAHHGHEEILSVECASVCAADALSAGRPGAR 373
TQELGRDHVNLGVEVCKRHKEDPVVINAIYAHHGHEEILSVECASVCAADALSAGRPGAR
Sbjct: 381 TQELGRDHVNLGVEVCKRHKEDPVVINAIYAHHGHEEILSVECASVCAADALSAGRPGAR 440
Query: 374 RKSDEEYAKRMQALEEIALEFDGVEKAYAMESGRELRVIVKSNQVRDNQVPIIARKIAKK 433
RKSDEEYAKRMQALEEIALEFDGVEKAYAMESGRELRVIVKSNQVRDNQVPIIARKIAKK
Sbjct: 441 RKSDEEYAKRMQALEEIALEFDGVEKAYAMESGRELRVIVKSNQVRDNQVPIIARKIAKK 500
Query: 434 IEESAQYVGEVGVQVVRESRFKTTATLKQ 462
IEESAQYVGEVGVQVVRESRFKTTATLKQ
Sbjct: 501 IEESAQYVGEVGVQVVRESRFKTTATLKQ 529
>ref|NP_223415.1| (NC_000921) putative [Helicobacter pylori J99]
sp|Q9ZL83|Y760_HELPJ Hypothetical protein JHP0697
pir||A71899 hypothetical protein jhp0697 - Helicobacter pylori (strain J99)
gb|AAD06283.1| (AE001501) putative [Helicobacter pylori J99]
Length = 529
Score = 847 bits (2188), Expect = 0.0
Identities = 432/449 (96%), Positives = 445/449 (98%)
Query: 14 QLQTHFDKKEAHLKHLEAQHKEFVRDEKRYLEKEKKELEKERQILEQEKENFKKQRAVCK 73
QLQTHFDKKEAHLKHLEAQHKEFVRDEKRYLEKEKKELEKERQILEQE+ENFKKQRA+CK
Sbjct: 81 QLQTHFDKKEAHLKHLEAQHKEFVRDEKRYLEKEKKELEKERQILEQERENFKKQRAICK 140
Query: 74 ESQAKALDAMLNYMAYTKDEIKSMILEQLEEELEAQKSALIRRYEKEAKEEGKKKSYAIL 133
E+QAKALDAMLNYMAYTKDEIKSMILEQLEEELEAQKSALIRRYEKEAKEEGKKKSYAIL
Sbjct: 141 EAQAKALDAMLNYMAYTKDEIKSMILEQLEEELEAQKSALIRRYEKEAKEEGKKKSYAIL 200
Query: 134 AEATARFAGNYAAENLTTRIALPCSDYIGRVIGKDGKNIEAFKKVSGVDIEFSEDSSELC 193
AEATARFAG+YA ENLT+RIALPCSDY+GRVIGKDGKNIEAFKK+SGVDIEFSEDSSELC
Sbjct: 201 AEATARFAGDYATENLTSRIALPCSDYVGRVIGKDGKNIEAFKKISGVDIEFSEDSSELC 260
Query: 194 LSSFNLYRREVASETLKILIEDGRIQPNRIEEVYHRVARNLEKELLSEGESVVLELELGA 253
LSSFN+YRREVASET+KILIEDGRIQPNRIEEVYHRVARN+EKELLSEGESVVLELELG
Sbjct: 261 LSSFNIYRREVASETIKILIEDGRIQPNRIEEVYHRVARNMEKELLSEGESVVLELELGT 320
Query: 254 MEDELKILIGKMRYRSSFGQNALQHSKEVALLAGLIAEQLGGDKKLARRAGILHDIGKAL 313
MEDELKILIGKMRYR SFGQNALQHSKEVALLAGLIAEQLGGDKKLARRAGILHDIGKAL
Sbjct: 321 MEDELKILIGKMRYRFSFGQNALQHSKEVALLAGLIAEQLGGDKKLARRAGILHDIGKAL 380
Query: 314 TQELGRDHVNLGVEVCKRHKEDPVVINAIYAHHGHEEILSVECASVCAADALSAGRPGAR 373
TQELGRDHVNLGVEVCKRHKEDPVVINAIYAHHGHEEI+SVECASVCAADALSAGRPGAR
Sbjct: 381 TQELGRDHVNLGVEVCKRHKEDPVVINAIYAHHGHEEIMSVECASVCAADALSAGRPGAR 440
Query: 374 RKSDEEYAKRMQALEEIALEFDGVEKAYAMESGRELRVIVKSNQVRDNQVPIIARKIAKK 433
RKSDEEYAKRMQALEEIALEFDGVEKAYAMESGRELRVIVKSNQVRDNQVPIIARKIAK+
Sbjct: 441 RKSDEEYAKRMQALEEIALEFDGVEKAYAMESGRELRVIVKSNQVRDNQVPIIARKIAKR 500
Query: 434 IEESAQYVGEVGVQVVRESRFKTTATLKQ 462
IEES QYVGEVGVQVVRE+RFKTTATLKQ
Sbjct: 501 IEESTQYVGEVGVQVVRENRFKTTATLKQ 529
>ref|NP_282356.1| (NC_002163) hypothetical protein Cj1209 [Campylobacter jejuni]
sp|Q9PN86|YC09_CAMJE Hypothetical protein Cj1209
pir||C81327 hypothetical protein Cj1209 [imported] - Campylobacter jejuni
(strain NCTC 11168)
emb|CAB73463.1| (AL139077) hypothetical protein Cj1209 [Campylobacter jejuni]
Length = 517
Score = 394 bits (1013), Expect = e-109
Identities = 202/437 (46%), Positives = 303/437 (69%), Gaps = 19/437 (4%)
Query: 21 KKEAHLKHLEAQHKEFVRDEKRYLEKEKKELEKERQILEQEKENFKKQRAVCKESQAKAL 80
KKE L+ Q +E ++++K YL K +K ++ + +++ K ++++ L
Sbjct: 90 KKEQKLQ----QEEEKLKEDKEYLCKSQKHIQNLQSDVDKLKNKYQEK-----------L 134
Query: 81 DAMLNYMAY----TKDEIKSMILEQLEEELEAQKSALIRRYEKEAKEEGKKKSYAILAEA 136
D +L + + T++E K +IL+++EE Q + ++R+YE+EAK E K+K+ I+A+A
Sbjct: 135 DDVLKILEHSTGLTQNEAKEIILKKVEENSREQIAHIVRKYEEEAKNEAKRKANFIIAQA 194
Query: 137 TARFAGNYAAENLTTRIALPCSDYIGRVIGKDGKNIEAFKKVSGVDIEFSEDSSELCLSS 196
T+RFAG +AAE L I + + GR+IGK+G+N++ + V GVDI + + +S
Sbjct: 195 TSRFAGEFAAERLINVINIKNDELKGRIIGKEGRNVKTLEMVLGVDIIIDDTPGAIIVSC 254
Query: 197 FNLYRREVASETLKILIEDGRIQPNRIEEVYHRVARNLEKELLSEGESVVLELELGAMED 256
FNLYRR +A++ +++L+EDGRIQP RIEE++ +V + + +L EGE++V++L L +
Sbjct: 255 FNLYRRAIATKVIELLVEDGRIQPARIEEIHEKVCKEFDSAILEEGETIVMDLGLNKIHP 314
Query: 257 ELKILIGKMRYRSSFGQNALQHSKEVALLAGLIAEQLGGDKKLARRAGILHDIGKALTQE 316
E+ LIGK++YR+S+GQNAL HS EVA LAG+IA + GGD+ LARRAGILHDIGKALT +
Sbjct: 315 EIVKLIGKLKYRASYGQNALAHSLEVAHLAGIIAAECGGDENLARRAGILHDIGKALTHD 374
Query: 317 LGRDHVNLGVEVCKRHKEDPVVINAIYAHHGHEEILSVECASVCAADALSAGRPGARRKS 376
HV+LG E+CKR+KE PVVINAIYAHHGHEE S+E A+VCAAD LSA RPGARR+
Sbjct: 375 FEGSHVDLGAELCKRYKEHPVVINAIYAHHGHEEATSIESAAVCAADTLSAARPGARREV 434
Query: 377 DEEYAKRMQALEEIALEFDGVEKAYAMESGRELRVIVKSNQVRDNQVPIIARKIAKKIEE 436
E + KR+ LE+IA +G++ AYA+ +GRE+RVI + V D++ ++A++IA +I+E
Sbjct: 435 LEAFLKRVSELEDIAKSKEGIKNAYAINAGREIRVIANAQLVNDDESVLLAKEIAAEIQE 494
Query: 437 SAQYVGEVGVQVVRESR 453
QY GE+ V V+RE R
Sbjct: 495 KMQYPGEIKVNVIRELR 511
>ref|NP_214188.1| (NC_000918) hypothetical protein [Aquifex aeolicus]
sp|O67622|YH32_AQUAE Hypothetical protein AQ_1732
pir||D70449 conserved hypothetical protein aq_1732 - Aquifex aeolicus
gb|AAC07588.1| (AE000753) hypothetical protein [Aquifex aeolicus]
Length = 558
Score = 338 bits (866), Expect = 1e-91
Identities = 183/436 (41%), Positives = 276/436 (62%), Gaps = 5/436 (1%)
Query: 22 KEAHLKH----LEAQHKEFVRDEKRYLEKEKKELEKERQILEQEKENFKKQRAVCKESQA 77
KE HL LE + +E + E R L+ ++ LE+ R + ++E K + +E +
Sbjct: 118 KERHLDRRWEALEKREEELLHRE-RELKDFERSLERWRDEIRHKEEELKHMKEEVEELKK 176
Query: 78 KALDAMLNYMAYTKDEIKSMILEQLEEELEAQKSALIRRYEKEAKEEGKKKSYAILAEAT 137
K L+ + T +E + I++++EEE + L++ E++AK + ++ I+A AT
Sbjct: 177 KELEELQRIAKLTLEEARQEIIKKVEEEAKKDAVKLMKVIEEDAKRRAEFEAKKIIATAT 236
Query: 138 ARFAGNYAAENLTTRIALPCSDYIGRVIGKDGKNIEAFKKVSGVDIEFSEDSSELCLSSF 197
R A A TT + LP +++ GR+IG++G+NI F+ ++GVD+ + + +SSF
Sbjct: 237 QRLAPQIAVNYTTTTVELPSNEFKGRIIGREGRNIRTFEILTGVDLIIDDTPDIVTISSF 296
Query: 198 NLYRREVASETLKILIEDGRIQPNRIEEVYHRVARNLEKELLSEGESVVLELELGAMEDE 257
+ RRE+A E L+ LI DGRI P RIEEV V R ++++ GE V EL+L +
Sbjct: 297 DPLRREIAKEALQRLIADGRIHPARIEEVVDEVKREFDEKIRKIGEETVYELDLHDINPG 356
Query: 258 LKILIGKMRYRSSFGQNALQHSKEVALLAGLIAEQLGGDKKLARRAGILHDIGKALTQEL 317
L IGK+ +R+S+ QN L HSKEVA +AGL+AE+LG D KLARRAG+LHDIGKA++ EL
Sbjct: 357 LYYYIGKLYFRTSYSQNVLLHSKEVAYIAGLMAEELGLDAKLARRAGLLHDIGKAISHEL 416
Query: 318 GRDHVNLGVEVCKRHKEDPVVINAIYAHHGHEEILSVECASVCAADALSAGRPGARRKSD 377
G H ++GVE+ +++ E VINAI AHH E + E A VCAADALSA RPGARR++
Sbjct: 417 GGSHTDIGVELARKYGEPDAVINAIRAHHEEEPVRYPEVALVCAADALSAARPGARRETL 476
Query: 378 EEYAKRMQALEEIALEFDGVEKAYAMESGRELRVIVKSNQVRDNQVPIIARKIAKKIEES 437
E Y +R++ LEEI F GV AYA+++GRE+RVIV ++ D + +++++I KKIEE
Sbjct: 477 EAYIRRLEKLEEIVKSFKGVANAYAVQAGREVRVIVNPEEISDEEAYLLSKEIPKKIEEE 536
Query: 438 AQYVGEVGVQVVRESR 453
+ G++ V V+RE+R
Sbjct: 537 LDFPGQIKVVVIRETR 552
>ref|NP_622990.1| (NC_003869) predicted HD superfamily hydrolase [Thermoanaerobacter
tengcongensis]
gb|AAM24594.1| (AE013096) predicted HD superfamily hydrolase [Thermoanaerobacter
tengcongensis]
Length = 523
Score = 332 bits (852), Expect = 4e-90
Identities = 172/445 (38%), Positives = 285/445 (63%), Gaps = 2/445 (0%)
Query: 9 KTRIWQLQTHFDKKEAHLK-HLEAQHKEFVRDEKRYLEKEKKELEKERQILEQEKENFKK 67
K I +L++ F+K+ + L+ K ++ E+ LEK + LE++ +LEQ+++ ++
Sbjct: 73 KEEIHRLRSDFEKEVRDRRGELQRLEKRLLQKEE-ILEKRAESLEQKEILLEQKQKEIQQ 131
Query: 68 QRAVCKESQAKALDAMLNYMAYTKDEIKSMILEQLEEELEAQKSALIRRYEKEAKEEGKK 127
K L+ + T++E KS++LE +++E++ + +I+ E +AKEE +
Sbjct: 132 LEEQITLLHKKQLEELERISGLTQEEAKSILLESVQKEIQHDMAVMIKEMENKAKEEADR 191
Query: 128 KSYAILAEATARFAGNYAAENLTTRIALPCSDYIGRVIGKDGKNIEAFKKVSGVDIEFSE 187
++ I+ A R A ++AAE + + LP + GR+IG++G+NI + ++G+D+ +
Sbjct: 192 RAREIVGLAIQRCAADHAAETTVSVVTLPNDEMKGRIIGREGRNIRTIETLTGIDLIIDD 251
Query: 188 DSSELCLSSFNLYRREVASETLKILIEDGRIQPNRIEEVYHRVARNLEKELLSEGESVVL 247
+ +S F+ RRE+A L+ LIEDGRI P RIEE+ + + ++ ++ GE
Sbjct: 252 TPEAVVISGFDPIRREIARIALEKLIEDGRIHPARIEEMVEKAKKEVDNMIIKAGEEAAF 311
Query: 248 ELELGAMEDELKILIGKMRYRSSFGQNALQHSKEVALLAGLIAEQLGGDKKLARRAGILH 307
E+ + + EL L+G++++R+S+GQN L+HS EVA LAGL+A +LG D +A+RAG+LH
Sbjct: 312 EVGVHGLHPELIKLLGRLKFRTSYGQNVLKHSIEVAHLAGLMAYELGADASIAKRAGLLH 371
Query: 308 DIGKALTQELGRDHVNLGVEVCKRHKEDPVVINAIYAHHGHEEILSVECASVCAADALSA 367
DIGKA+ E+ HV +G E+ KR+ E V++AI AHH E ++E V AADA+SA
Sbjct: 372 DIGKAVDHEVEGPHVMIGAELAKRYHESDAVVHAIMAHHNDVEPQTIEAVLVQAADAISA 431
Query: 368 GRPGARRKSDEEYAKRMQALEEIALEFDGVEKAYAMESGRELRVIVKSNQVRDNQVPIIA 427
RPGARR++ E Y KR+ LE+IA F+GVEKAYA+++GRE+R++VK + D+++ I+A
Sbjct: 432 ARPGARREALEAYIKRLDKLEQIANSFEGVEKAYAIQAGREIRIMVKPEAISDDELVILA 491
Query: 428 RKIAKKIEESAQYVGEVGVQVVRES 452
R I+KKIEE +Y G++ V V+RE+
Sbjct: 492 RNISKKIEEEVEYPGQIKVTVIRET 516
>ref|NP_562588.1| (NC_003366) conserved hypothetical protein [Clostridium
perfringens]
dbj|BAB81378.1| (AP003191) conserved hypothetical protein [Clostridium perfringens]
Length = 530
Score = 331 bits (848), Expect = 1e-89
Identities = 180/454 (39%), Positives = 284/454 (61%), Gaps = 22/454 (4%)
Query: 21 KKEAHLKHLEAQHK--------------EFVRDEKRYLEKEKKELEKERQILEQEKENFK 66
KKEA L+ E HK E R E+R +++E+ L+K+ ++LE+ +++
Sbjct: 72 KKEAILEAKEEVHKLRADLDKETRDRRNEIQRFERRLIQREES-LDKKGEMLEKREDSIN 130
Query: 67 KQRAVCKESQAKALDAMLNYMA-------YTKDEIKSMILEQLEEELEAQKSALIRRYEK 119
K+ +E + + + A + ++ ++++L+++ E++ + + LI+ E
Sbjct: 131 KKSIEIQELEERVQNLYGEQRAELERISNLSSEDARTLLLDEVRREIKHESAMLIKELET 190
Query: 120 EAKEEGKKKSYAILAEATARFAGNYAAENLTTRIALPCSDYIGRVIGKDGKNIEAFKKVS 179
+AKEE KKS I+ A R A ++ +E +ALP + GR+IG++G+NI + ++
Sbjct: 191 KAKEEADKKSREIITTAIQRCAADHVSETTVHVVALPNDEMKGRIIGREGRNIRTLETLT 250
Query: 180 GVDIEFSEDSSELCLSSFNLYRREVASETLKILIEDGRIQPNRIEEVYHRVARNLEKELL 239
GVD+ + + LSSF+ RREVA L+ LI DGRI P RIEE+ R +++E ++
Sbjct: 251 GVDLIIDDTPEAVILSSFDPIRREVARIALEKLIVDGRIHPARIEEMVERAIKDVENDIK 310
Query: 240 SEGESVVLELELGAMEDELKILIGKMRYRSSFGQNALQHSKEVALLAGLIAEQLGGDKKL 299
EGE E + + E+ L+G+++YR+S+GQN L+HS EV+ LAGL+A +LG D L
Sbjct: 311 EEGEQATFETGVHGLHPEIIKLLGRLKYRTSYGQNVLKHSIEVSYLAGLMASELGLDVNL 370
Query: 300 ARRAGILHDIGKALTQELGRDHVNLGVEVCKRHKEDPVVINAIYAHHGHEEILSVECASV 359
ARRAG+LHDIGK + QE H +G E+ K++ E P V+NAI AHHG E+ ++E V
Sbjct: 371 ARRAGLLHDIGKGVDQEYEGPHAVIGGELAKKYHESPAVVNAIAAHHGDTEMQTLEAVLV 430
Query: 360 CAADALSAGRPGARRKSDEEYAKRMQALEEIALEFDGVEKAYAMESGRELRVIVKSNQVR 419
AADA+SA RPGARR++ E Y KR++ LEEIA ++GVEK+YA+++GRE+R++VK +QV
Sbjct: 431 QAADAISAARPGARRETLEAYIKRLEKLEEIATSYEGVEKSYAIQAGREIRIMVKPDQVD 490
Query: 420 DNQVPIIARKIAKKIEESAQYVGEVGVQVVRESR 453
D +AR I KKIEE +Y G++ + V+RE+R
Sbjct: 491 DAGAIEMARNIVKKIEEQLEYPGQIKINVIRETR 524
>ref|NP_229653.1| (NC_000853) conserved hypothetical protein [Thermotoga maritima]
sp|Q9X2H2|YI57_THEMA Hypothetical protein TM1857
pir||B72201 conserved hypothetical protein - Thermotoga maritima (strain MSB8)
gb|AAD36919.1|AE001823_1 (AE001823) conserved hypothetical protein [Thermotoga maritima]
Length = 508
Score = 330 bits (845), Expect = 3e-89
Identities = 174/445 (39%), Positives = 274/445 (61%)
Query: 9 KTRIWQLQTHFDKKEAHLKHLEAQHKEFVRDEKRYLEKEKKELEKERQILEQEKENFKKQ 68
+ + +L+ F+K+ + + +E + + L ++++ LEK Q +E+ K N +++
Sbjct: 58 REEVHRLREEFEKERSRREEELRALEERLLKREELLTRKEENLEKREQQVEELKANLEEK 117
Query: 69 RAVCKESQAKALDAMLNYMAYTKDEIKSMILEQLEEELEAQKSALIRRYEKEAKEEGKKK 128
+E + + + + T +E + +ILE+ + E + L + +++ +EE +K+
Sbjct: 118 MREVEEKEKRIDEELKRLAGMTVEEARELILEEARQRYEHDLAKLYKEMKEQVEEEAEKE 177
Query: 129 SYAILAEATARFAGNYAAENLTTRIALPCSDYIGRVIGKDGKNIEAFKKVSGVDIEFSED 188
+ ++A A R+A +Y E + ++LP D GR+IG++G+NI F+K++GVD+ +
Sbjct: 178 AKKVIAFAVQRYAPDYVGEITVSTVSLPSDDMKGRIIGREGRNIRTFEKITGVDLIIDDT 237
Query: 189 SSELCLSSFNLYRREVASETLKILIEDGRIQPNRIEEVYHRVARNLEKELLSEGESVVLE 248
+ LS FN RRE+A TL+ L+ DGRI P RIEE+Y + + +EK + G+ +
Sbjct: 238 PEVVVLSCFNPLRREIARITLEKLVADGRIHPARIEEMYEKAKQEVEKAIKEAGQEATFK 297
Query: 249 LELGAMEDELKILIGKMRYRSSFGQNALQHSKEVALLAGLIAEQLGGDKKLARRAGILHD 308
+ + EL L+GK++YR+S+GQN L HS EVALLAG +A +LG + ARR G+LHD
Sbjct: 298 AGVMGLHPELVKLLGKLKYRTSYGQNVLNHSIEVALLAGYMASELGLNADKARRGGLLHD 357
Query: 309 IGKALTQELGRDHVNLGVEVCKRHKEDPVVINAIYAHHGHEEILSVECASVCAADALSAG 368
IGKA+ QEL H +G E+ +R+ E +IN I +HHG EE ++ E V AADALSA
Sbjct: 358 IGKAVDQELEGSHTTIGAELARRYGEKEDIINMILSHHGEEEPMTPEAVLVAAADALSAA 417
Query: 369 RPGARRKSDEEYAKRMQALEEIALEFDGVEKAYAMESGRELRVIVKSNQVRDNQVPIIAR 428
RPGARR+S E Y KR+ LEEIA F VEKAYA+++GRE+RVIV+ ++V D +A
Sbjct: 418 RPGARRESLENYIKRLMKLEEIAKSFKYVEKAYAIQAGREIRVIVEPDKVDDALAEKLAY 477
Query: 429 KIAKKIEESAQYVGEVGVQVVRESR 453
I+KKIEE +Y G + V V+RE R
Sbjct: 478 DISKKIEEELEYPGVLKVVVIREKR 502
>ref|NP_243244.1| (NC_002570) BH2378~unknown conserved protein [Bacillus halodurans]
sp|Q9KAB2|YN78_BACHD Hypothetical protein BH2378
dbj|BAB06097.1| (AP001515) BH2378~unknown conserved protein [Bacillus halodurans]
Length = 521
Score = 328 bits (842), Expect = 6e-89
Identities = 178/453 (39%), Positives = 285/453 (62%), Gaps = 21/453 (4%)
Query: 21 KKEAHLKHLEAQHK------EFVRDEKRYLEKEK------KELEKERQILEQEKENFKKQ 68
K E H EA+ + E + E R ++KE+ + L+K+ + L++ +E+ K+
Sbjct: 64 KDEVHKLRTEAEREIRERRNEIQKQENRLVQKEEILDRKSETLDKKEESLDKREESLTKK 123
Query: 69 RAVCKESQAKALDAMLNYM--------AYTKDEIKSMILEQLEEELEAQKSALIRRYEKE 120
+ +E +K ++ +LN ++++E + +I ++E+E+ + + LI+ +
Sbjct: 124 QRQIEEMDSK-VEEILNKQQVELERISGFSREEAREVIRAEVEQEMAHETALLIKERVAK 182
Query: 121 AKEEGKKKSYAILAEATARFAGNYAAENLTTRIALPCSDYIGRVIGKDGKNIEAFKKVSG 180
AKEE KK+ IL+ A R + ++ AE + + LP + GR+IG++G+NI A + ++G
Sbjct: 183 AKEEADKKAREILSLAIQRCSADHVAETTVSVVNLPNDEMKGRIIGREGRNIRALETLTG 242
Query: 181 VDIEFSEDSSELCLSSFNLYRREVASETLKILIEDGRIQPNRIEEVYHRVARNLEKELLS 240
+D+ + + LS F+ RRE+A L+ L++DGRI P RIEE+ + R +++ +
Sbjct: 243 IDLIIDDTPEAVILSGFDPIRREIARTALEKLVQDGRIHPARIEEMVDKARREVDEAIRE 302
Query: 241 EGESVVLELELGAMEDELKILIGKMRYRSSFGQNALQHSKEVALLAGLIAEQLGGDKKLA 300
GE E+ + + +L ++G++++R+S+GQN L+HS EVA LAGL+A +LG D KLA
Sbjct: 303 YGEQTTFEMGIHGLHPDLIKILGRLKFRTSYGQNVLKHSMEVAYLAGLMAAELGEDVKLA 362
Query: 301 RRAGILHDIGKALTQELGRDHVNLGVEVCKRHKEDPVVINAIYAHHGHEEILSVECASVC 360
RRAG+LHDIGKA+ E+ HV +GVE+ ++KE PVVINAI +HHG E S+ + V
Sbjct: 363 RRAGLLHDIGKAIDHEVEGSHVEIGVELATKYKEHPVVINAIASHHGDTEATSIISSLVA 422
Query: 361 AADALSAGRPGARRKSDEEYAKRMQALEEIALEFDGVEKAYAMESGRELRVIVKSNQVRD 420
AADALSA RPGARR++ E Y +R++ LEEI+ FDGVEK YA+++GRE+R++VK + V D
Sbjct: 423 AADALSAARPGARRETLETYIRRLEKLEEISESFDGVEKTYAIQAGREVRIMVKPDIVDD 482
Query: 421 NQVPIIARKIAKKIEESAQYVGEVGVQVVRESR 453
+AR I KKIEE Y G + V V+RE+R
Sbjct: 483 VLAHKLARDITKKIEEELDYPGHIRVTVIRETR 515
>ref|NP_348441.1| (NC_003030) HD superfamily hydrolase, YMDA B.subtilis ortholog
[Clostridium acetobutylicum]
gb|AAK79781.1|AE007690_8 (AE007690) HD superfamily hydrolase, YMDA B.subtilis ortholog
[Clostridium acetobutylicum]
Length = 514
Score = 328 bits (840), Expect = 1e-88
Identities = 184/446 (41%), Positives = 280/446 (62%), Gaps = 14/446 (3%)
Query: 21 KKEAHL------KHLEAQHKEFVRDEKRYLEKEKKELEKERQILEQ------EKENFKKQ 68
K+EAH K + E R E+R L++E+ L+K+ +LE+ E+EN ++
Sbjct: 64 KEEAHRLRSDLDKETRERRNEIQRLERRNLQREET-LDKKNDLLEKRENGLNERENSIQE 122
Query: 69 RAVCKESQAKALDAMLNYMA-YTKDEIKSMILEQLEEELEAQKSALIRRYEKEAKEEGKK 127
R E K L ++ T +E K+++LE++ E++ +KS +I+ E++AKEE K
Sbjct: 123 RQNTIEQLYKEEREKLEQLSGLTSEEAKNLLLEEVNREIKHEKSIMIKEVEQKAKEEADK 182
Query: 128 KSYAILAEATARFAGNYAAENLTTRIALPCSDYIGRVIGKDGKNIEAFKKVSGVDIEFSE 187
K+ I+ A R A ++ AE+ ++LP + GR+IG++G+NI A + ++GVD+ +
Sbjct: 183 KAREIITYAIQRCAADHVAESTVYVVSLPNDEMKGRIIGREGRNIRAIETLTGVDLIIDD 242
Query: 188 DSSELCLSSFNLYRREVASETLKILIEDGRIQPNRIEEVYHRVARNLEKELLSEGESVVL 247
+ LS F+ RREVA L+ LI DGRI P RIEE+ + + +E + EGE
Sbjct: 243 TPEAVILSGFDPVRREVAKVALEKLILDGRIHPARIEEMVEKAKKEVENNIKEEGEQATF 302
Query: 248 ELELGAMEDELKILIGKMRYRSSFGQNALQHSKEVALLAGLIAEQLGGDKKLARRAGILH 307
E + + EL L+G+++YR+S+GQN L+HS EV+ LAG +A +LG D A+RAG+LH
Sbjct: 303 ETGVHGLHSELTRLLGRLKYRTSYGQNVLKHSIEVSYLAGFMAAELGIDPTFAKRAGLLH 362
Query: 308 DIGKALTQELGRDHVNLGVEVCKRHKEDPVVINAIYAHHGHEEILSVECASVCAADALSA 367
DIGKA+ E+ H +G EV K++ E P+++NAI AHHG E S+E V AADA+SA
Sbjct: 363 DIGKAVDHEVEGPHALIGAEVSKKYHELPLIVNAIGAHHGDVEPQSLEAILVQAADAISA 422
Query: 368 GRPGARRKSDEEYAKRMQALEEIALEFDGVEKAYAMESGRELRVIVKSNQVRDNQVPIIA 427
RPGARR++ E Y KR++ LEEIA ++GVEK+YA+++GRE+R++VK V D +A
Sbjct: 423 ARPGARRETLEAYIKRLEKLEEIANSYEGVEKSYAIQAGREIRIMVKPETVDDAGSIEMA 482
Query: 428 RKIAKKIEESAQYVGEVGVQVVRESR 453
R I KKIEE +Y G++ V V+RE+R
Sbjct: 483 RGIVKKIEEQLEYPGQIKVNVIRETR 508
>ref|NP_470772.1| (NC_003212) similar to unknown protein [Listeria innocua]
ref|NP_464924.1| (NC_003210) similar to unknown protein [Listeria monocytogenes
EGD-e]
sp|Q9L738|YD99_LISMO Hypothetical protein Lmo1399/Lin1436
gb|AAF34762.1|AF228345_1 (AF228345) unknown [Listeria monocytogenes]
emb|CAC99477.1| (AL591979) similar to unknown protein [Listeria monocytogenes]
emb|CAC96667.1| (AL596168) similar to unknown protein [Listeria innocua]
Length = 520
Score = 324 bits (831), Expect = 1e-87
Identities = 178/460 (38%), Positives = 280/460 (60%), Gaps = 27/460 (5%)
Query: 21 KKEAHLKHLEAQHK--------------EFVRDEKRYLEKEKK------ELEKERQILEQ 60
KKEA L+ E H+ E + E R L++E+ L K LE+
Sbjct: 55 KKEALLEAKEENHRLRTEIENELRGRRTETQKAENRLLQREENLDRKDTSLSKREATLER 114
Query: 61 EKENFKKQRAVCKESQAKALDAML-------NYMAYTKDEIKSMILEQLEEELEAQKSAL 113
++E+ K++ +E ++K + + A +K+E KS+IL Q+EEEL + +
Sbjct: 115 KEESISKRQQQIEEKESKLAEMIQAEQTELERISALSKEEAKSIILNQVEEELTHDTAIM 174
Query: 114 IRRYEKEAKEEGKKKSYAILAEATARFAGNYAAENLTTRIALPCSDYIGRVIGKDGKNIE 173
++ E AKEE KK+ IL+ A R A ++ AE + + LP + GR+IG++G+NI
Sbjct: 175 VKESENRAKEESDKKAKNILSLAIQRCAADHVAETTVSVVTLPNDEMKGRIIGREGRNIR 234
Query: 174 AFKKVSGVDIEFSEDSSELCLSSFNLYRREVASETLKILIEDGRIQPNRIEEVYHRVARN 233
+ ++G+D+ + + LS F+ RRE+A L+ L++DGRI P RIEE+ + +
Sbjct: 235 TLETLTGIDLIIDDTPEAVILSGFDPIRREIARIALEKLVQDGRIHPARIEEMVDKARKE 294
Query: 234 LEKELLSEGESVVLELELGAMEDELKILIGKMRYRSSFGQNALQHSKEVALLAGLIAEQL 293
+++ + GE E+ + ++ +L ++G++RYR+S+GQN L HS EV+ LAG++A +L
Sbjct: 295 VDEHIREVGEQATFEVGIHSIHPDLIKILGRLRYRTSYGQNVLNHSLEVSKLAGILAGEL 354
Query: 294 GGDKKLARRAGILHDIGKALTQELGRDHVNLGVEVCKRHKEDPVVINAIYAHHGHEEILS 353
G D LA+RAG+LHDIGKA+ E+ HV +GVE+ ++KE+ VVIN+I +HHG E S
Sbjct: 355 GEDVTLAKRAGLLHDIGKAIDHEIEGSHVEIGVELATKYKENDVVINSIASHHGDTEATS 414
Query: 354 VECASVCAADALSAGRPGARRKSDEEYAKRMQALEEIALEFDGVEKAYAMESGRELRVIV 413
V V AADALSA RPGAR ++ E Y +R++ LEEI+ +DGVEK+YA+++GRE+R+IV
Sbjct: 415 VIAVLVAAADALSAARPGARSETLENYIRRLEKLEEISESYDGVEKSYAIQAGREVRIIV 474
Query: 414 KSNQVRDNQVPIIARKIAKKIEESAQYVGEVGVQVVRESR 453
+ + + D +AR I K+IEE Y G + V V+RE+R
Sbjct: 475 EPDTIDDLSSYRLARDIRKRIEEELDYPGHIKVTVIRETR 514
>ref|NP_389578.1| (NC_000964) similar to hypothetical proteins [Bacillus subtilis]
sp|O31774|YMDA_BACSU Hypothetical protein ymdA
pir||F69884 conserved hypothetical protein ymdA - Bacillus subtilis
emb|CAB13569.1| (Z99112) similar to hypothetical proteins [Bacillus subtilis]
Length = 520
Score = 322 bits (824), Expect = 8e-87
Identities = 172/454 (37%), Positives = 277/454 (60%), Gaps = 23/454 (5%)
Query: 21 KKEAHLKHLEAQHKEFVRDEKRYLEKEKKELEKERQILEQEKENFKKQRAVCK------- 73
K E H ++A+ + VR+ + L+K++ L ++ + L+++ E K+ A+ +
Sbjct: 63 KDEIHKLRIDAEQE--VRERRNELQKQENRLLQKEENLDRKHEGIDKREAMLEKKDHSLN 120
Query: 74 ------ESQAKALDAMLNYM--------AYTKDEIKSMILEQLEEELEAQKSALIRRYEK 119
E +D M+ + T+DE K +ILE++E EL + + + E
Sbjct: 121 ERQQHIEEMESKVDEMIRMQQSELERISSLTRDEAKQIILERVENELSHDIAIMTKETEN 180
Query: 120 EAKEEGKKKSYAILAEATARFAGNYAAENLTTRIALPCSDYIGRVIGKDGKNIEAFKKVS 179
AKEE KK+ IL+ A R A ++ AE + + LP + GR+IG++G+NI + ++
Sbjct: 181 RAKEEADKKAKNILSLALQRCAADHVAETTVSVVNLPNDEMKGRIIGREGRNIRTLETLT 240
Query: 180 GVDIEFSEDSSELCLSSFNLYRREVASETLKILIEDGRIQPNRIEEVYHRVARNLEKELL 239
G+D+ + + LS F+ RRE A L L++DGRI P RIEE+ + R ++ +
Sbjct: 241 GIDLIIDDTPEAVILSGFDPIRRETARIALDKLVQDGRIHPARIEEMVEKSRREVDDYIR 300
Query: 240 SEGESVVLELELGAMEDELKILIGKMRYRSSFGQNALQHSKEVALLAGLIAEQLGGDKKL 299
GE E+ + + +L ++G++++R+S+GQN L+HS EVA LAGL+A +LG D KL
Sbjct: 301 EMGEQTTFEVGVHGLHPDLIKILGRLKFRTSYGQNVLKHSMEVAFLAGLMASELGEDAKL 360
Query: 300 ARRAGILHDIGKALTQELGRDHVNLGVEVCKRHKEDPVVINAIYAHHGHEEILSVECASV 359
A+RAG+LHDIGKA+ E+ HV +GVE+ ++KE PVVIN+I +HHG EE S+ V
Sbjct: 361 AKRAGLLHDIGKAIDHEVEGSHVEIGVELATKYKEHPVVINSIASHHGDEEPTSIIAVLV 420
Query: 360 CAADALSAGRPGARRKSDEEYAKRMQALEEIALEFDGVEKAYAMESGRELRVIVKSNQVR 419
AADALSA RPGAR ++ E Y +R++ LEEI+ ++GVEK++A+++GRE+R++VK + +
Sbjct: 421 AAADALSAARPGARSETLENYIRRLEKLEEISESYEGVEKSFAIQAGREVRIMVKPDSIN 480
Query: 420 DNQVPIIARKIAKKIEESAQYVGEVGVQVVRESR 453
D + +AR I K+IE+ Y G + V V+RE+R
Sbjct: 481 DLEAHRLARDIRKRIEDELDYPGHIKVTVIRETR 514
>ref|NP_359176.1| (NC_003098) Conserved hypothetical protein [Streptococcus
pneumoniae R6]
gb|AAL00387.1| (AE008526) Conserved hypothetical protein [Streptococcus pneumoniae
R6]
Length = 537
Score = 319 bits (818), Expect = 4e-86
Identities = 168/443 (37%), Positives = 272/443 (60%), Gaps = 3/443 (0%)
Query: 14 QLQTHFDKKEAHLKHLEAQHKEFVRDEKRY---LEKEKKELEKERQILEQEKENFKKQRA 70
++ F + LK +E++ E R L +++ LE++ Q + +N +
Sbjct: 89 EVDAEFKSERQELKQIESRLTERATSLDRKDDNLTSKEQTLEQKEQSISDRAKNLDAREE 148
Query: 71 VCKESQAKALDAMLNYMAYTKDEIKSMILEQLEEELEAQKSALIRRYEKEAKEEGKKKSY 130
+E + + + A ++ E + +IL Q EE L + ++ IR E+E KE K +
Sbjct: 149 QLEEVERQKEAELERIGALSQAEARDIILAQTEENLTREIASRIREAEQEVKERSDKMAK 208
Query: 131 AILAEATARFAGNYAAENLTTRIALPCSDYIGRVIGKDGKNIEAFKKVSGVDIEFSEDSS 190
IL +A R AG Y AE+ + + LP GR+IG++G+NI F+ ++GVD+ +
Sbjct: 209 DILVQAMQRIAGEYVAESTNSTVHLPDDTMKGRIIGREGRNIRTFESLTGVDVIIDDTPE 268
Query: 191 ELCLSSFNLYRREVASETLKILIEDGRIQPNRIEEVYHRVARNLEKELLSEGESVVLELE 250
+ LS F+ RRE+A T+++L++DGRI P RIEE+ + + ++ ++ GE+ E+
Sbjct: 269 VVTLSGFDPIRREIARMTMEMLLKDGRIHPARIEELVEKNRQEIDNKIREYGEAAAYEIG 328
Query: 251 LGAMEDELKILIGKMRYRSSFGQNALQHSKEVALLAGLIAEQLGGDKKLARRAGILHDIG 310
+ +L ++G++++R+S+GQN L+HS EVA LAG++A +LG + LARRAG LHDIG
Sbjct: 329 APNLHPDLMKIMGRLQFRTSYGQNVLRHSIEVAKLAGIMASELGENAALARRAGFLHDIG 388
Query: 311 KALTQELGRDHVNLGVEVCKRHKEDPVVINAIYAHHGHEEILSVECASVCAADALSAGRP 370
KA+ E+ HV +G+E+ +++KE PVV+N I +HHG E SV V AADALSA RP
Sbjct: 389 KAIDHEVEGSHVEIGMELARKYKEPPVVVNTIASHHGDVEAESVIAVIVAAADALSAARP 448
Query: 371 GARRKSDEEYAKRMQALEEIALEFDGVEKAYAMESGRELRVIVKSNQVRDNQVPIIARKI 430
GAR +S E Y KR+ LEEIA F+GV+ ++A+++GRE+R++V +++D++V I+A K+
Sbjct: 449 GARSESLESYIKRLHDLEEIANGFEGVQTSFALQAGREIRIMVNPGKIKDDKVTILAHKV 508
Query: 431 AKKIEESAQYVGEVGVQVVRESR 453
KKIE + Y G + V V+RE R
Sbjct: 509 RKKIENNLDYPGNIKVTVIRELR 531
>ref|NP_346175.1| (NC_003028) KH domain protein [Streptococcus pneumoniae TIGR4]
gb|AAK75815.1| (AE007467) KH domain protein [Streptococcus pneumoniae TIGR4]
Length = 534
Score = 319 bits (818), Expect = 4e-86
Identities = 168/443 (37%), Positives = 272/443 (60%), Gaps = 3/443 (0%)
Query: 14 QLQTHFDKKEAHLKHLEAQHKEFVRDEKRY---LEKEKKELEKERQILEQEKENFKKQRA 70
++ F + LK +E++ E R L +++ LE++ Q + +N +
Sbjct: 86 EVDAEFKSERQELKQIESRLTERATSLDRKDDNLTSKEQTLEQKEQSISDRAKNLDAREE 145
Query: 71 VCKESQAKALDAMLNYMAYTKDEIKSMILEQLEEELEAQKSALIRRYEKEAKEEGKKKSY 130
+E + + + A ++ E + +IL Q EE L + ++ IR E+E KE K +
Sbjct: 146 QLEEVERQKEAELERIGALSQAEARDIILAQTEENLTREIASRIREAEQEVKERSDKMAK 205
Query: 131 AILAEATARFAGNYAAENLTTRIALPCSDYIGRVIGKDGKNIEAFKKVSGVDIEFSEDSS 190
IL +A R AG Y AE+ + + LP GR+IG++G+NI F+ ++GVD+ +
Sbjct: 206 DILVQAMQRIAGEYVAESTNSTVHLPDDTMKGRIIGREGRNIRTFESLTGVDVIIDDTPE 265
Query: 191 ELCLSSFNLYRREVASETLKILIEDGRIQPNRIEEVYHRVARNLEKELLSEGESVVLELE 250
+ LS F+ RRE+A T+++L++DGRI P RIEE+ + + ++ ++ GE+ E+
Sbjct: 266 VVTLSGFDPIRREIARMTMEMLLKDGRIHPARIEELVEKNRQEIDNKIREYGEAAAYEIG 325
Query: 251 LGAMEDELKILIGKMRYRSSFGQNALQHSKEVALLAGLIAEQLGGDKKLARRAGILHDIG 310
+ +L ++G++++R+S+GQN L+HS EVA LAG++A +LG + LARRAG LHDIG
Sbjct: 326 APNLHPDLMKIMGRLQFRTSYGQNVLRHSIEVAKLAGIMASELGENAALARRAGFLHDIG 385
Query: 311 KALTQELGRDHVNLGVEVCKRHKEDPVVINAIYAHHGHEEILSVECASVCAADALSAGRP 370
KA+ E+ HV +G+E+ +++KE PVV+N I +HHG E SV V AADALSA RP
Sbjct: 386 KAIDHEVEGSHVEIGMELARKYKEPPVVVNTIASHHGDVEAESVIAVIVAAADALSAARP 445
Query: 371 GARRKSDEEYAKRMQALEEIALEFDGVEKAYAMESGRELRVIVKSNQVRDNQVPIIARKI 430
GAR +S E Y KR+ LEEIA F+GV+ ++A+++GRE+R++V +++D++V I+A K+
Sbjct: 446 GARSESLESYIKRLHDLEEIANGFEGVQTSFALQAGREIRIMVNPGKIKDDKVTILAHKV 505
Query: 431 AKKIEESAQYVGEVGVQVVRESR 453
KKIE + Y G + V V+RE R
Sbjct: 506 RKKIENNLDYPGNIKVTVIRELR 528
>ref|NP_657744.1| (NC_003995) HD, HD domain [Bacillus anthracis A2012] [Bacillus
anthracis str. A2012]
Length = 520
Score = 315 bits (807), Expect = 7e-85
Identities = 168/454 (37%), Positives = 278/454 (61%), Gaps = 23/454 (5%)
Query: 21 KKEAHLKHLEAQHKEFVRDEKRYLEKEKKELEKERQILEQEKENFKKQRA---------V 71
K E H EA+ + +RD + L+K++ L ++ + L+++ E K+ V
Sbjct: 63 KDEIHTLRTEAELE--IRDRRSELQKQENRLMQKEENLDRKDETLDKRELQLEKKEDSLV 120
Query: 72 CKESQAKALDAMLNYMAY------------TKDEIKSMILEQLEEELEAQKSALIRRYEK 119
++ Q + L++ + + T+++ K++IL ++E E+ + + +++ E
Sbjct: 121 ARQQQIEELESKVGELVQKQQTELERISNLTREQAKAIILGKVESEVSHEIAVMVKESEV 180
Query: 120 EAKEEGKKKSYAILAEATARFAGNYAAENLTTRIALPCSDYIGRVIGKDGKNIEAFKKVS 179
AKEE KK+ IL+ A R A ++ AE + + LP + GR+IG++G+NI + ++
Sbjct: 181 RAKEEADKKAKEILSLAMQRCAADHVAETTVSVVNLPNDEMKGRIIGREGRNIRTLETLT 240
Query: 180 GVDIEFSEDSSELCLSSFNLYRREVASETLKILIEDGRIQPNRIEEVYHRVARNLEKELL 239
G+D+ + + LS F+ RRE A L L++DGRI P RIEE+ + R +++ +
Sbjct: 241 GIDLIIDDTPEAVILSGFDPIRRETARIALDKLVQDGRIHPARIEEMVEKSRREVDEYIR 300
Query: 240 SEGESVVLELELGAMEDELKILIGKMRYRSSFGQNALQHSKEVALLAGLIAEQLGGDKKL 299
GE E+ + + +L ++G+++YR+S+GQN L+HS EVA L GL+A +LG D+KL
Sbjct: 301 EVGEQTTFEVGVHGLHPDLIKILGRLKYRTSYGQNVLKHSMEVAYLTGLMAAELGEDEKL 360
Query: 300 ARRAGILHDIGKALTQELGRDHVNLGVEVCKRHKEDPVVINAIYAHHGHEEILSVECASV 359
ARRAG+LHDIGKA+ E+ HV +GVE+ ++KE PVVIN+I +HHG E S+ V
Sbjct: 361 ARRAGLLHDIGKAIDHEVEGSHVEIGVELATKYKEHPVVINSIASHHGDTEPTSIIAVLV 420
Query: 360 CAADALSAGRPGARRKSDEEYAKRMQALEEIALEFDGVEKAYAMESGRELRVIVKSNQVR 419
AADALSA RPGAR ++ E Y +R++ LEEI+ ++GVEK++A+++GRE+R++VK + +
Sbjct: 421 AAADALSAARPGARSETLENYIRRLEKLEEISESYEGVEKSFAIQAGREVRILVKPDTID 480
Query: 420 DNQVPIIARKIAKKIEESAQYVGEVGVQVVRESR 453
D + +AR I K+IE Y G + V V+RE+R
Sbjct: 481 DLEAHRLARDIRKRIENELDYPGHIKVTVIRETR 514
>ref|NP_602713.1| (NC_003454) hydrolase (HD superfamily) [Fusobacterium nucleatum
subsp. nucleatum ATCC 25586]
gb|AAL94012.1| (AE010494) hydrolase (HD superfamily) [Fusobacterium nucleatum
subsp. nucleatum ATCC 25586]
Length = 508
Score = 313 bits (801), Expect = 4e-84
Identities = 160/445 (35%), Positives = 280/445 (61%)
Query: 9 KTRIWQLQTHFDKKEAHLKHLEAQHKEFVRDEKRYLEKEKKELEKERQILEQEKENFKKQ 68
K + +Q++ +K+ + K+ AQ + + ++ L+ + +++E + LE+ + +++
Sbjct: 58 KEKAYQIKEEIEKEARNSKNEIAQKEARIIKKEEILDGKIEKIEIKSLELEKINDELEEK 117
Query: 69 RAVCKESQAKALDAMLNYMAYTKDEIKSMILEQLEEELEAQKSALIRRYEKEAKEEGKKK 128
R + + K + + TK + + ++L ++ EE+ + IR +E + EE +K
Sbjct: 118 RKEIDDLRVKQEEELSRVSELTKADAREILLRKVREEMTHDMAITIREFENKLDEEKEKI 177
Query: 129 SYAILAEATARFAGNYAAENLTTRIALPCSDYIGRVIGKDGKNIEAFKKVSGVDIEFSED 188
S IL+ A + A +Y A+ + I LP + GR+IG++G+NI + ++GVD+ +
Sbjct: 178 SQKILSTAIGKAAADYVADATVSVINLPNDEMKGRIIGREGRNIRTIEALTGVDVIIDDT 237
Query: 189 SSELCLSSFNLYRREVASETLKILIEDGRIQPNRIEEVYHRVARNLEKELLSEGESVVLE 248
+ LS F+ +REVA T++ LI DGRI P +IEE+ ++ +++EKE+++ GE ++E
Sbjct: 238 PEAVVLSCFDGVKREVARLTIEKLITDGRIHPGKIEEIVNKCKKDIEKEIVAAGEEALIE 297
Query: 249 LELGAMEDELKILIGKMRYRSSFGQNALQHSKEVALLAGLIAEQLGGDKKLARRAGILHD 308
L + M E+ +G+++YR+S+GQN L HS EVA +A +A ++G + +LA+R G+LHD
Sbjct: 298 LSIPTMHPEIIKTLGRLKYRTSYGQNVLTHSIEVAKIASTMAAEIGANVELAKRGGLLHD 357
Query: 309 IGKALTQELGRDHVNLGVEVCKRHKEDPVVINAIYAHHGHEEILSVECASVCAADALSAG 368
IGK L E+ H +G E K+ E VINA+ AHH E +VE V AADA+SA
Sbjct: 358 IGKVLVNEIETSHAIVGGEFIKKFGEKQDVINAVMAHHNEVEFETVEAILVQAADAVSAS 417
Query: 369 RPGARRKSDEEYAKRMQALEEIALEFDGVEKAYAMESGRELRVIVKSNQVRDNQVPIIAR 428
RPGARR++ Y KR++ LEEIA F+GVE +YA+++GRELR+++ ++V D++ +++R
Sbjct: 418 RPGARRETLTAYIKRLENLEEIANSFEGVESSYAIQAGRELRIVINPDKVSDDEATLMSR 477
Query: 429 KIAKKIEESAQYVGEVGVQVVRESR 453
++AKKIE++ QY G++ V ++RE+R
Sbjct: 478 EVAKKIEDTMQYPGQIKVTILRETR 502
>ref|NP_371810.1| (NC_002758) conserved hypothetical protein [Staphylococcus aureus
subsp. aureus Mu50]
ref|NP_374402.1| (NC_002745) conserved hypothetical protein [Staphylococcus aureus
subsp. aureus N315]
ref|NP_645986.1| (NC_003923) conserved hypothetical protein [Staphylococcus aureus
subsp. aureus MW2]
dbj|BAB42381.1| (AP003133) conserved hypothetical protein [Staphylococcus aureus
subsp. aureus N315]
dbj|BAB57448.1| (AP003361) conserved hypothetical protein [Staphylococcus aureus
subsp. aureus Mu50]
dbj|BAB95034.1| (AP004826) conserved hypothetical protein [Staphylococcus aureus
subsp. aureus MW2]
Length = 519
Score = 311 bits (797), Expect = 1e-83
Identities = 169/438 (38%), Positives = 269/438 (60%), Gaps = 13/438 (2%)
Query: 29 LEAQHKEFVRDEKRYLEKEKKE------LEKERQILEQEKENF--KKQRAVCKESQAKAL 80
L + E R E R L+KE+ L+K+ +ILEQ++ K+Q+ KES + L
Sbjct: 76 LRERRSELQRQETRLLQKEENLERKSDLLDKKDEILEQKESKIEEKQQQVDAKESSVQTL 135
Query: 81 -----DAMLNYMAYTKDEIKSMILEQLEEELEAQKSALIRRYEKEAKEEGKKKSYAILAE 135
+ T++E + L+++EEEL + L++ EKEAKE+ K + +LA
Sbjct: 136 IMKHEQELERISGLTQEEAINEQLQRVEEELSQDIAVLVKEKEKEAKEKVDKTAKELLAT 195
Query: 136 ATARFAGNYAAENLTTRIALPCSDYIGRVIGKDGKNIEAFKKVSGVDIEFSEDSSELCLS 195
A R A ++ +E+ + + LP + GR+IG++G+NI + ++G+D+ + + LS
Sbjct: 196 AVQRLAADHTSESTVSVVNLPNDEMKGRIIGREGRNIRTLETLTGIDLIIDDTPEAVILS 255
Query: 196 SFNLYRREVASETLKILIEDGRIQPNRIEEVYHRVARNLEKELLSEGESVVLELELGAME 255
F+ RRE+A L L+ DGRI P RIE++ + + ++ + GE E+ M
Sbjct: 256 GFDPIRREIARTALVNLVSDGRIHPGRIEDMVEKARKEVDDIIREAGEQATFEVNAHNMH 315
Query: 256 DELKILIGKMRYRSSFGQNALQHSKEVALLAGLIAEQLGGDKKLARRAGILHDIGKALTQ 315
+L ++G++ YR+S+GQN L+HS EVA LA ++A +LG D+ LA+RAG+LHD+GKA+
Sbjct: 316 PDLVKIVGRLNYRTSYGQNVLKHSIEVAHLASMLAAELGEDETLAKRAGLLHDVGKAIDH 375
Query: 316 ELGRDHVNLGVEVCKRHKEDPVVINAIYAHHGHEEILSVECASVCAADALSAGRPGARRK 375
E+ HV +GVE+ K++ E+ VINAI++HHG E S+ V AADALSA RPGAR++
Sbjct: 376 EVEGSHVEIGVELAKKYGENETVINAIHSHHGDVEPTSIISILVAAADALSAARPGARKE 435
Query: 376 SDEEYAKRMQALEEIALEFDGVEKAYAMESGRELRVIVKSNQVRDNQVPIIARKIAKKIE 435
+ E Y +R++ LE ++ +DGVEKA+A+++GRE+RVIV ++ D + +AR I +IE
Sbjct: 436 TLENYIRRLERLETLSESYDGVEKAFAIQAGREIRVIVSPEEIDDLKSYRLARDIKNQIE 495
Query: 436 ESAQYVGEVGVQVVRESR 453
+ QY G + V VVRE+R
Sbjct: 496 DELQYPGHIKVTVVRETR 513
>ref|NP_607693.1| (NC_003485) conserved hypothetical protein [Streptococcus pyogenes
MGAS8232]
gb|AAL98192.1| (AE010076) conserved hypothetical protein [Streptococcus pyogenes
MGAS8232]
Length = 535
Score = 308 bits (790), Expect = 7e-83
Identities = 168/444 (37%), Positives = 268/444 (59%), Gaps = 5/444 (1%)
Query: 14 QLQTHFDKKEAHLKHLEAQHKE----FVRDEKRYLEKEKKELEKERQILEQEKENFKKQR 69
+++ F + LK LE + E R ++ KEK KE+ + ++ K ++Q
Sbjct: 87 EIEQEFKSERQELKQLETRLAERSLTLDRKDENLSSKEKVLDSKEQSLTDKSKHIDERQL 146
Query: 70 AVCKESQAKALDAMLNYMAYTKDEIKSMILEQLEEELEAQKSALIRRYEKEAKEEGKKKS 129
V K + K + + A T E + +IL + E +L + + IR E++ K+ K +
Sbjct: 147 QVEKLEEEKKAE-LEKVAAMTIAEAREVILMETENKLTHEIATRIRDAERDIKDRTVKTA 205
Query: 130 YAILAEATARFAGNYAAENLTTRIALPCSDYIGRVIGKDGKNIEAFKKVSGVDIEFSEDS 189
+LA+A R AG Y E T + LP + GR+IG++G+NI + ++G+D+ +
Sbjct: 206 KDLLAQAMQRLAGEYVTEQTITSVHLPDDNMKGRIIGREGRNIRTLESLTGIDVIIDDTP 265
Query: 190 SELCLSSFNLYRREVASETLKILIEDGRIQPNRIEEVYHRVARNLEKELLSEGESVVLEL 249
+ LS F+ RRE+A TL+ LI DGRI P RIEE+ + ++ + GE+ E+
Sbjct: 266 EVVILSGFDPIRREIARMTLESLIADGRIHPARIEELVEKNRLEMDNRIREYGEAAAYEI 325
Query: 250 ELGAMEDELKILIGKMRYRSSFGQNALQHSKEVALLAGLIAEQLGGDKKLARRAGILHDI 309
+ +L ++G++++R+SFGQN L+HS EV LAG++A +LG + LARRAG LHD+
Sbjct: 326 GAPNLHPDLIKIMGRLQFRTSFGQNVLRHSVEVGKLAGILAGELGENVALARRAGFLHDM 385
Query: 310 GKALTQELGRDHVNLGVEVCKRHKEDPVVINAIYAHHGHEEILSVECASVCAADALSAGR 369
GKA+ +E+ HV +G+E +++KE PVV+N I +HHG E SV V AADALS+ R
Sbjct: 386 GKAIDREVEGSHVEIGMEFARKYKEHPVVVNTIASHHGDVEPDSVIAVLVAAADALSSAR 445
Query: 370 PGARRKSDEEYAKRMQALEEIALEFDGVEKAYAMESGRELRVIVKSNQVRDNQVPIIARK 429
PGAR +S E Y KR++ LEEIA FDGV+ ++A+++GRE+R++V+ ++ D+QV I++ K
Sbjct: 446 PGARNESMENYIKRLRDLEEIATSFDGVQNSFALQAGREIRIMVQPEKISDDQVVILSHK 505
Query: 430 IAKKIEESAQYVGEVGVQVVRESR 453
+ +KIE + Y G + V V+RE R
Sbjct: 506 VREKIEHNLDYPGNIKVTVIREMR 529
>ref|NP_269682.1| (NC_002737) conserved hypothetical protein [Streptococcus pyogenes]
[Streptococcus pyogenes M1 GAS]
gb|AAK34403.1| (AE006594) conserved hypothetical protein [Streptococcus pyogenes
M1 GAS]
Length = 535
Score = 308 bits (790), Expect = 7e-83
Identities = 168/444 (37%), Positives = 268/444 (59%), Gaps = 5/444 (1%)
Query: 14 QLQTHFDKKEAHLKHLEAQHKE----FVRDEKRYLEKEKKELEKERQILEQEKENFKKQR 69
+++ F + LK LE + E R ++ KEK KE+ + ++ K ++Q
Sbjct: 87 EIEQEFKSERQELKQLETRLAERSLTLDRKDENLSSKEKVLDSKEQSLTDKSKHIDERQL 146
Query: 70 AVCKESQAKALDAMLNYMAYTKDEIKSMILEQLEEELEAQKSALIRRYEKEAKEEGKKKS 129
V K + K + + A T E + +IL + E +L + + IR E++ K+ K +
Sbjct: 147 QVEKLEEEKKAE-LEKVAAMTIAEAREVILMETENKLTHEIATRIRDAERDIKDRTVKTA 205
Query: 130 YAILAEATARFAGNYAAENLTTRIALPCSDYIGRVIGKDGKNIEAFKKVSGVDIEFSEDS 189
+LA+A R AG Y E T + LP + GR+IG++G+NI + ++G+D+ +
Sbjct: 206 KDLLAQAMQRLAGEYVTEQTITSVHLPDDNMKGRIIGREGRNIRTLESLTGIDVIIDDTP 265
Query: 190 SELCLSSFNLYRREVASETLKILIEDGRIQPNRIEEVYHRVARNLEKELLSEGESVVLEL 249
+ LS F+ RRE+A TL+ LI DGRI P RIEE+ + ++ + GE+ E+
Sbjct: 266 EVVILSGFDPIRREIARMTLESLIADGRIHPARIEELVEKNRLEMDNRIREYGEAAAYEI 325
Query: 250 ELGAMEDELKILIGKMRYRSSFGQNALQHSKEVALLAGLIAEQLGGDKKLARRAGILHDI 309
+ +L ++G++++R+SFGQN L+HS EV LAG++A +LG + LARRAG LHD+
Sbjct: 326 GAPNLHPDLIKIMGRLQFRTSFGQNVLRHSVEVGKLAGILAGELGENVALARRAGFLHDM 385
Query: 310 GKALTQELGRDHVNLGVEVCKRHKEDPVVINAIYAHHGHEEILSVECASVCAADALSAGR 369
GKA+ +E+ HV +G+E +++KE PVV+N I +HHG E SV V AADALS+ R
Sbjct: 386 GKAIDREVEGSHVEIGMEFARKYKEHPVVVNTIASHHGDVEPDSVIAVLVAAADALSSAR 445
Query: 370 PGARRKSDEEYAKRMQALEEIALEFDGVEKAYAMESGRELRVIVKSNQVRDNQVPIIARK 429
PGAR +S E Y KR++ LEEIA FDGV+ ++A+++GRE+R++V+ ++ D+QV I++ K
Sbjct: 446 PGARNESMENYIKRLRDLEEIATSFDGVQNSFALQAGREIRIMVQPEKISDDQVVILSHK 505
Query: 430 IAKKIEESAQYVGEVGVQVVRESR 453
+ +KIE + Y G + V V+RE R
Sbjct: 506 VREKIENNLDYPGNIKVTVIREMR 529
>ref|NP_268057.1| (NC_002662) HYPOTHETICAL PROTEIN [Lactococcus lactis subsp. lactis]
gb|AAK05998.1|AE006419_8 (AE006419) HYPOTHETICAL PROTEIN [Lactococcus lactis subsp. lactis]
Length = 531
Score = 303 bits (775), Expect = 4e-81
Identities = 162/450 (36%), Positives = 275/450 (61%), Gaps = 17/450 (3%)
Query: 14 QLQTHFDKKEAHLKHLEAQHKEFVRDEKRYLEKEKKELEKERQILEQEKENF-------- 65
+++ F ++ LK E + K+ + L+++ L K+ + L+ ++EN
Sbjct: 83 EIEDEFKQERQELKETEKRLKQ----REEILDRKDDTLTKKEENLDSKEENLVRKTDTLS 138
Query: 66 --KKQRAVCKESQAKALDAMLNYMAYTKDEIKSMILEQLEEELEAQKSALIRRYEKEAKE 123
++Q A +E + L+ + N + D+ + +IL + + L + + +IR+ E++A+
Sbjct: 139 KREEQLAHIEEKKRLELERISNL---STDDAREIILSETRDGLTKEMAQIIRQSEEKAQV 195
Query: 124 EGKKKSYAILAEATARFAGNYAAENLTTRIALPCSDYIGRVIGKDGKNIEAFKKVSGVDI 183
E K++ I++ A R + + AE + + LP GR+IG++G+NI F+ ++G+D+
Sbjct: 196 EADKRAKNIISLAIQRVSSDSVAEQTVSVVNLPDDGMKGRIIGREGRNIRTFEALTGIDV 255
Query: 184 EFSEDSSELCLSSFNLYRREVASETLKILIEDGRIQPNRIEEVYHRVARNLEKELLSEGE 243
+ + LS F+ RRE+A TL+ L++DGRI P RIEE+ + + L+ ++ GE
Sbjct: 256 IIDDTPEAVVLSGFDPIRREIARMTLEQLVQDGRIHPARIEELVEKNRKALDHKMREYGE 315
Query: 244 SVVLELELGAMEDELKILIGKMRYRSSFGQNALQHSKEVALLAGLIAEQLGGDKKLARRA 303
E+ + +L ++G++ +R+S+GQN L HS EVA +AG +A ++G + LA+RA
Sbjct: 316 QAAFEVGAHNLHPDLMKIMGRLHFRTSYGQNVLDHSVEVAHIAGNLAGEMGENVALAKRA 375
Query: 304 GILHDIGKALTQELGRDHVNLGVEVCKRHKEDPVVINAIYAHHGHEEILSVECASVCAAD 363
G LHDIGKAL E+ HV +G E+ +++KE+P+VIN I +HHG E LS V AAD
Sbjct: 376 GFLHDIGKALDHEVEGSHVEIGTELARKYKENPIVINTIASHHGDTEPLSNIAVLVAAAD 435
Query: 364 ALSAGRPGARRKSDEEYAKRMQALEEIALEFDGVEKAYAMESGRELRVIVKSNQVRDNQV 423
ALSA RPGARR+S E Y KR++ LE I+ F+GVE A+A+++GRE+RV+VK ++ D+Q+
Sbjct: 436 ALSAARPGARRESIENYIKRLKDLEAISTSFEGVETAFALQAGREIRVMVKPEKLTDDQI 495
Query: 424 PIIARKIAKKIEESAQYVGEVGVQVVRESR 453
I+AR + +IE+ Y G + + V+RE+R
Sbjct: 496 VILARDVKNRIEDEMDYPGNIKITVIRETR 525
>ref|NP_219455.1| (NC_000919) conserved hypothetical protein [Treponema pallidum]
sp|O83981|YA18_TREPA Hypothetical protein TP1018
pir||F71253 conserved hypothetical protein TP1018 - syphilis spirochete
gb|AAC65967.1| (AE001269) conserved hypothetical protein [Treponema pallidum]
Length = 504
Score = 295 bits (755), Expect = 8e-79
Identities = 151/419 (36%), Positives = 258/419 (61%), Gaps = 1/419 (0%)
Query: 35 EFVRDEKRYLEKEKKELEKERQILEQEKENFKKQRAVCKESQAKALDAMLNYMAYTKDEI 94
E R E+R L+KE+ + ++ +E+ ++ +++C+E +A+ + T+++
Sbjct: 81 ELQRAERRLLQKEEALSTRAGELDSRERSLKQRDQSLCQE-EARYRQELERVSGLTQNQA 139
Query: 95 KSMILEQLEEELEAQKSALIRRYEKEAKEEGKKKSYAILAEATARFAGNYAAENLTTRIA 154
+ +I++ LE E + ALI + E++A ++++ IL R + + + +
Sbjct: 140 RDLIIKNLENEAKHDAQALINKIEEDAALNAERRARDILVTTMQRITADVTGDVTVSTVN 199
Query: 155 LPCSDYIGRVIGKDGKNIEAFKKVSGVDIEFSEDSSELCLSSFNLYRREVASETLKILIE 214
LP + GR+IG++G+NI A + ++G D+ + + +S F+ R+E+A +L+ L+
Sbjct: 200 LPSEEMKGRIIGREGRNIRALETLTGADVVVDDTPEAVVISCFDPVRKEIARISLERLVL 259
Query: 215 DGRIQPNRIEEVYHRVARNLEKELLSEGESVVLELELGAMEDELKILIGKMRYRSSFGQN 274
DGRI P RIEE+ +V + + +++ EGE V+ +L + M E +G++ +R+S+GQN
Sbjct: 260 DGRIHPARIEEIVQKVTQEVSQKIYEEGEKVLFDLGIHDMCPEGVRALGRLYFRTSYGQN 319
Query: 275 ALQHSKEVALLAGLIAEQLGGDKKLARRAGILHDIGKALTQELGRDHVNLGVEVCKRHKE 334
L HSKEVALLA ++A ++G D +A+R +LHDIGK + + R+H +G+E+ ++ E
Sbjct: 320 VLYHSKEVALLASMLASEIGADVAIAKRGALLHDIGKGVETDSDRNHAEIGMEMARKMNE 379
Query: 335 DPVVINAIYAHHGHEEILSVECASVCAADALSAGRPGARRKSDEEYAKRMQALEEIALEF 394
DP V+NA+ +HH E VE V ADA+SA RPGARR+ + Y KR++ LE IA F
Sbjct: 380 DPRVVNAVGSHHNDIEPCCVESWLVQVADAISAARPGARREMVDHYVKRLENLEAIAEGF 439
Query: 395 DGVEKAYAMESGRELRVIVKSNQVRDNQVPIIARKIAKKIEESAQYVGEVGVQVVRESR 453
GVEKAYA+++GRELRV+V ++++ D V + R IAKKIE +Y G + V ++RE+R
Sbjct: 440 SGVEKAYAIQAGRELRVLVNNDKIPDRDVKALGRDIAKKIESDLKYPGRIRVTLIRETR 498
>ref|NP_296182.1| (NC_001263) conserved hypothetical protein [Deinococcus
radiodurans]
sp|Q9RRM6|YO62_DEIRA Hypothetical protein DR2462
pir||H75271 conserved hypothetical protein - Deinococcus radiodurans (strain
R1)
gb|AAF12001.1|AE002075_5 (AE002075) conserved hypothetical protein [Deinococcus radiodurans]
Length = 572
Score = 290 bits (742), Expect = 2e-77
Identities = 164/466 (35%), Positives = 276/466 (59%), Gaps = 21/466 (4%)
Query: 9 KTRIWQLQTHFDKKEAHLKHLEAQHKEFVRDEKRYLEKEKKELEKERQILEQEKENFKKQ 68
+ ++ L+ + + K AQ +E + +++ +E+++L +E + L + E +
Sbjct: 101 REQVRALRAQLEAEREQAKADAAQQREALSTDRQETRREREDLGREIERLGRRTEQLDAR 160
Query: 69 ---------------RAVCKESQAKA-----LDAMLNYMAYTKDEI-KSMILEQLEEELE 107
R V ++ Q A D L +A E+ + IL +L ELE
Sbjct: 161 SDKLDALEERLEGGWREVQRQEQEVAERLRQADLKLYEVAGLTPEVAREQILGRLNAELE 220
Query: 108 AQKSALIRRYEKEAKEEGKKKSYAILAEATARFAGNYAAENLTTRIALPCSDYIGRVIGK 167
+K+ ++ ++A E ++ + +I+A+A R A +A+ + + +P GR+IG+
Sbjct: 221 EEKAIRVKAMTEKAGAEARRSARSIIAQAIQRSASETSAQLSVSVVPIPSDAMKGRLIGR 280
Query: 168 DGKNIEAFKKVSGVDIEFSEDSSELCLSSFNLYRREVASETLKILIEDGRIQPNRIEEVY 227
+G+NI AF+ ++GVD+ + + LSSFN RREVA L L+ DGRI P RIEE+
Sbjct: 281 EGRNIRAFESLTGVDLIIDDTPEAVILSSFNPLRREVARHVLDALVADGRIHPTRIEEMV 340
Query: 228 HRVARNLEKELLSEGESVVLELELGAMEDELKILIGKMRYRSSFGQNALQHSKEVALLAG 287
H+ +++ + +GE +E + ++ L L+G+M +R+S+ QN L+HS +VA L G
Sbjct: 341 HKAQDDMKTFIHQQGEEAAIEAGVVGLKPGLVQLLGRMYFRTSYSQNVLKHSVQVAHLTG 400
Query: 288 LIAEQLGGDKKLARRAGILHDIGKALTQELGRDHVNLGVEVCKRHKEDPVVINAIYAHHG 347
++A++LG D LARRAG++HD+GK++ +E+ HV +G+ + +R E VI+AI HH
Sbjct: 401 IMADELGLDAALARRAGLMHDVGKSIDREIEGTHVEIGINLARRFGEPAEVIDAIAHHHD 460
Query: 348 HEEILSVECASVCAADALSAGRPGARRKSDEEYAKRMQALEEIALEFDGVEKAYAMESGR 407
E ++ V AADA+SA RPGARR++ E Y +R++ LE+IA+ F GV++AYA+++GR
Sbjct: 461 PENGETLYSVLVAAADAISAARPGARREALESYVRRLEQLEQIAVAFPGVQQAYAIQAGR 520
Query: 408 ELRVIVKSNQVRDNQVPIIARKIAKKIEESAQYVGEVGVQVVRESR 453
E+RVIV+ +V D Q ++AR IA ++E+ +Y G+V V VVRESR
Sbjct: 521 EVRVIVQPEKVTDAQATLLARDIAGRVEQDMEYPGQVQVTVVRESR 566
>ref|NP_212638.1| (NC_001318) conserved hypothetical protein [Borrelia burgdorferi]
sp|O51457|Y504_BORBU Hypothetical protein BB0504
pir||G70162 conserved hypothetical protein BB0504 - Lyme disease spirochete
gb|AAC66875.1| (AE001153) conserved hypothetical protein [Borrelia burgdorferi]
Length = 510
Score = 278 bits (710), Expect = 1e-73
Identities = 150/441 (34%), Positives = 256/441 (58%), Gaps = 8/441 (1%)
Query: 21 KKEAHLKHLEAQHKEFVRDEKRYLEKEK------KELEKERQILEQEKENFKKQRAVCKE 74
+K + + + E V EKR L++E+ L+K++ ++ + + F+++ V +E
Sbjct: 64 EKNQQDRDIRDRKNEIVNLEKRLLQREETLDKRISALDKQQSRVDFKIKEFEQKEKVIRE 123
Query: 75 SQAKALDAMLNYMAYTKDEIKSMILEQLEEELEAQKSALIRRYEKEAKEEGKKKSYAILA 134
+A + + N T+++ + +++E++E E + +I + E+EA+ K + IL
Sbjct: 124 KEADLVKRLENISGLTREDARKIVIEKVEHESKRDAQVIINKSEQEAQLLADKVAKDILV 183
Query: 135 EATARFAGNYAAENLTTRIALPCSDYIGRVIGKDGKNIEAFKKVSGVDIEFSEDSSELCL 194
R ++E + LP + GR+IGK+G+NI A + + G DI + + +
Sbjct: 184 STMQRIVTEVSSEFTVASVELPNDEMKGRIIGKEGRNIRALETLIGADIIIDDTPEAVVI 243
Query: 195 SSFNLYRREVASETLKILIEDGRIQPNRIEEVYHRVARNLEKELLSEGESVVLELELGAM 254
S F+ R+E+A TL+ L+ DGRI P RIEEV + V + + EGE VV +L + +
Sbjct: 244 SCFDPIRKELAKRTLERLVTDGRIHPARIEEVVYNVTNEINSIIQEEGEKVVFDLNIHGL 303
Query: 255 EDELKILIGKMRYRSSFGQNALQHSKEVALLAGLIAEQLGGDKKLARRAGILHDIGKAL- 313
+ L +G++ +RSS+GQN L HSKE A++ ++A+++ D + +RA +LHDIGK +
Sbjct: 304 DKRLIRGLGRLYFRSSYGQNVLSHSKETAIIGEILAKEMKLDPVVVKRACLLHDIGKGME 363
Query: 314 -TQELGRDHVNLGVEVCKRHKEDPVVINAIYAHHGHEEILSVECASVCAADALSAGRPGA 372
+ H G E+ + E +V+NAI AHH + S+E V ADA+SA RPGA
Sbjct: 364 SISDNSEGHAITGAELAQSCGESEIVVNAIAAHHNEVKPESLEAIVVQIADAISASRPGA 423
Query: 373 RRKSDEEYAKRMQALEEIALEFDGVEKAYAMESGRELRVIVKSNQVRDNQVPIIARKIAK 432
RR+S Y R++ LE+IA F+GV+K YA+++GRE+R+IV + + D + ++AR IAK
Sbjct: 424 RRESLNNYINRLKRLEDIAYSFEGVQKCYAIQAGREVRIIVDNALINDEKSILLARDIAK 483
Query: 433 KIEESAQYVGEVGVQVVRESR 453
KIE +Y G++ V ++RE+R
Sbjct: 484 KIEAEMRYPGKIKVTIIRETR 504
>ref|NP_661629.1| (NC_002932) conserved hypothetical protein [Chlorobium tepidum TLS]
gb|AAM71971.1| (AE012844) conserved hypothetical protein [Chlorobium tepidum TLS]
Length = 524
Score = 274 bits (701), Expect = 1e-72
Identities = 158/450 (35%), Positives = 262/450 (58%), Gaps = 5/450 (1%)
Query: 8 WKTRIWQLQTHFDKKEAHLKHLEAQHKE---FVRDEKRYLEKEKKELEKERQILEQEKEN 64
WK R + + K L+ Q ++ + ++ R +++ +K+L+++R+ L+ + +N
Sbjct: 70 WKKRKREFDSEVTIKNNKFAQLQKQIRQKEVTLANQMRDIKETEKKLQEQREELKHQTQN 129
Query: 65 FKKQRAVCKESQAKALDAMLNYMAYTKDEIKSMILEQLEEELEAQKSALIRRYEKEAKEE 124
+ + A +++ + + + T +E + M+++ + + + + + + +EA ++
Sbjct: 130 VQNRSAELEKTILEQNQRLESISNLTAEEARQMLIDNMIAKAREEAAETVHQIHEEATQK 189
Query: 125 GKKKSYAILAEATARFAGNYAAENLTTRIALPCSDYIGRVIGKDGKNIEAFKKVSGVDIE 184
+ + I+ A R + A E+ + + + + GR+IG++G+NI+AF+ +GVDI
Sbjct: 190 ADRIAEKIMLTAIQRISFEQATESALSVVHIQSDELKGRIIGREGRNIKAFENATGVDII 249
Query: 185 FSEDSSELCLSSFNLYRREVASETLKILIEDGRIQPNRIEEVYHRVARNLEKELLSEGES 244
+ + LS F+ RRE+A TL+ L+ DG I P IE+ Y + +E ++S GE
Sbjct: 250 VDDTPEVVILSCFDPLRREMAKLTLQKLLVDGIIHPVAIEKAYQDAKKEIEDVIMSSGEE 309
Query: 245 VVLELELGAMEDELKILIGKMRYRSSFGQNALQHSKEVALLAGLIAEQLGGDKKLARRAG 304
+ L++ M E+ LIGKMR+ + +GQN LQHS+EVA+LAGL+A +L D K A+RAG
Sbjct: 310 AISSLQIPDMPAEIVNLIGKMRFHTVYGQNLLQHSREVAMLAGLMAAELKLDAKQAKRAG 369
Query: 305 ILHDIGKALTQELGRDHVNLGVEVCKRHKEDPVVINAIYAHHGHEEILSVECASVCAADA 364
+LHDIG L E H G+E K+ PVV+NAI AHHG E S V AA+
Sbjct: 370 LLHDIGLVL-PETEMPHALAGMEFLKKFNMSPVVLNAIGAHHGEVEKASPIADLVDAANI 428
Query: 365 LSAGRPGAR-RKSDEEYAKRMQALEEIALEFDGVEKAYAMESGRELRVIVKSNQVRDNQV 423
+S RPGAR + E KR+++LEEIA F GV K YA+++GRE+RVIV+ + V D+Q
Sbjct: 429 VSLSRPGARGAVTAEGNVKRLESLEEIARTFPGVIKTYALQAGREIRVIVEGDNVSDSQA 488
Query: 424 PIIARKIAKKIEESAQYVGEVGVQVVRESR 453
++A IA KIE AQY G++ V ++RE R
Sbjct: 489 DVLAHDIASKIESEAQYPGQIKVTILREKR 518
>sp|Q01444|YFF1_MYCMY Hypothetical protein in ffh 5'region
pir||S35480 hypothetical protein 1 (SRPM54 3' region) - Mycoplasma mycoides
(fragment)
gb|AAA25440.1| (M91593) ORF 1 [Mycoplasma mycoides]
Length = 422
Score = 270 bits (690), Expect = 3e-71
Identities = 148/410 (36%), Positives = 246/410 (59%)
Query: 44 LEKEKKELEKERQILEQEKENFKKQRAVCKESQAKALDAMLNYMAYTKDEIKSMILEQLE 103
L++ ++ +E + Q L+ + +K++ + + + + + + TK + K ++++Q++
Sbjct: 7 LKRSQEIVESKSQRLDAGILDLEKRKFLVDQKEEYLIKLLEDVSGLTKYQAKELLIKQIK 66
Query: 104 EELEAQKSALIRRYEKEAKEEGKKKSYAILAEATARFAGNYAAENLTTRIALPCSDYIGR 163
+ E + ++++ E +A + K S IL A R ++ T + LP D GR
Sbjct: 67 NKSEKELISILKNAELQAHSKAKIISNNILILAMERIKVELTSQRTTNIVKLPSDDLKGR 126
Query: 164 VIGKDGKNIEAFKKVSGVDIEFSEDSSELCLSSFNLYRREVASETLKILIEDGRIQPNRI 223
+IGKDG+N++ F+++ GVDI E + + +SSFN RRE+A+ TL+ LI DGRIQP +I
Sbjct: 127 IIGKDGRNMKTFEQIGGVDIVVDETPNVVVVSSFNPIRREIATRTLEQLIIDGRIQPVKI 186
Query: 224 EEVYHRVARNLEKELLSEGESVVLELELGAMEDELKILIGKMRYRSSFGQNALQHSKEVA 283
E + + LE + G + + EL + ++ EL LIGK+++R+S+GQN L HS EVA
Sbjct: 187 ENELKKQEQELEYIIQETGLNTIKELNINDIDIELVKLIGKLKFRTSYGQNVLAHSIEVA 246
Query: 284 LLAGLIAEQLGGDKKLARRAGILHDIGKALTQELGRDHVNLGVEVCKRHKEDPVVINAIY 343
L+G IA +LG D + A RAG+LHDIGKA+ E HV LG E+ +++ EDP++IN+I
Sbjct: 247 KLSGAIASELGLDVEKAIRAGLLHDIGKAIDFEKQGSHVVLGAEIARKYNEDPIIINSIE 306
Query: 344 AHHGHEEILSVECASVCAADALSAGRPGARRKSDEEYAKRMQALEEIALEFDGVEKAYAM 403
+HH +E S A V AD++SA RPGAR + +E+ RM +E+I GV K YA+
Sbjct: 307 SHHEDKEKSSEIAAIVAIADSISASRPGARYNAIDEFILRMHEIEKIGNSIPGVAKTYAL 366
Query: 404 ESGRELRVIVKSNQVRDNQVPIIARKIAKKIEESAQYVGEVGVQVVRESR 453
+SGR++R+IV D + +I K+ ++I+ GE+ + V+RE +
Sbjct: 367 QSGRQIRLIVDPLVASDLDLALILEKMKEQIKNKVIIPGEITITVIREKK 416
>pir||S27590 hypothetical protein 1 - Mycoplasma mycoides (SGC3) (fragment)
Length = 421
Score = 270 bits (690), Expect = 3e-71
Identities = 148/410 (36%), Positives = 246/410 (59%)
Query: 44 LEKEKKELEKERQILEQEKENFKKQRAVCKESQAKALDAMLNYMAYTKDEIKSMILEQLE 103
L++ ++ +E + Q L+ + +K++ + + + + + + TK + K ++++Q++
Sbjct: 6 LKRSQEIVESKSQRLDAGILDLEKRKFLVDQKEEYLIKLLEDVSGLTKYQAKELLIKQIK 65
Query: 104 EELEAQKSALIRRYEKEAKEEGKKKSYAILAEATARFAGNYAAENLTTRIALPCSDYIGR 163
+ E + ++++ E +A + K S IL A R ++ T + LP D GR
Sbjct: 66 NKSEKELISILKNAELQAHSKAKIISNNILILAMERIKVELTSQRTTNIVKLPSDDLKGR 125
Query: 164 VIGKDGKNIEAFKKVSGVDIEFSEDSSELCLSSFNLYRREVASETLKILIEDGRIQPNRI 223
+IGKDG+N++ F+++ GVDI E + + +SSFN RRE+A+ TL+ LI DGRIQP +I
Sbjct: 126 IIGKDGRNMKTFEQIGGVDIVVDETPNVVVVSSFNPIRREIATRTLEQLIIDGRIQPVKI 185
Query: 224 EEVYHRVARNLEKELLSEGESVVLELELGAMEDELKILIGKMRYRSSFGQNALQHSKEVA 283
E + + LE + G + + EL + ++ EL LIGK+++R+S+GQN L HS EVA
Sbjct: 186 ENELKKQEQELEYIIQETGLNTIKELNINDIDIELVKLIGKLKFRTSYGQNVLAHSIEVA 245
Query: 284 LLAGLIAEQLGGDKKLARRAGILHDIGKALTQELGRDHVNLGVEVCKRHKEDPVVINAIY 343
L+G IA +LG D + A RAG+LHDIGKA+ E HV LG E+ +++ EDP++IN+I
Sbjct: 246 KLSGAIASELGLDVEKAIRAGLLHDIGKAIDFEKQGSHVVLGAEIARKYNEDPIIINSIE 305
Query: 344 AHHGHEEILSVECASVCAADALSAGRPGARRKSDEEYAKRMQALEEIALEFDGVEKAYAM 403
+HH +E S A V AD++SA RPGAR + +E+ RM +E+I GV K YA+
Sbjct: 306 SHHEDKEKSSEIAAIVAIADSISASRPGARYNAIDEFILRMHEIEKIGNSIPGVAKTYAL 365
Query: 404 ESGRELRVIVKSNQVRDNQVPIIARKIAKKIEESAQYVGEVGVQVVRESR 453
+SGR++R+IV D + +I K+ ++I+ GE+ + V+RE +
Sbjct: 366 QSGRQIRLIVDPLVASDLDLALILEKMKEQIKNKVIIPGEITITVIREKK 415
>gb|AAK00328.1|AF320250_1 (AF320250) YmdA [Lactobacillus delbrueckii]
Length = 251
Score = 221 bits (564), Expect = 1e-56
Identities = 108/245 (44%), Positives = 169/245 (68%)
Query: 209 LKILIEDGRIQPNRIEEVYHRVARNLEKELLSEGESVVLELELGAMEDELKILIGKMRYR 268
L+ LI+DGRI P RIEE+ + + + ++ GES ++EL + M EL ++G+++YR
Sbjct: 1 LQKLIKDGRIHPARIEEMVDKARKEVNDDIYEAGESALMELGIHRMNPELVKILGRLKYR 60
Query: 269 SSFGQNALQHSKEVALLAGLIAEQLGGDKKLARRAGILHDIGKALTQELGRDHVNLGVEV 328
+S+GQN L HS EV LAG +A +LG D+KLA RAG+LHDIGKA+ ++ HV +GVE+
Sbjct: 61 TSYGQNVLAHSIEVGKLAGTMAAELGLDEKLAVRAGLLHDIGKAIDHDIEGSHVEIGVEL 120
Query: 329 CKRHKEDPVVINAIYAHHGHEEILSVECASVCAADALSAGRPGARRKSDEEYAKRMQALE 388
+++ E +V+NAI AHHG LS V AAD +S+ RPGAR +S E Y +R+ LE
Sbjct: 121 TRKYHEPDLVVNAIAAHHGDVPKLSFIADLVVAADTISSARPGARSESLENYIRRLTELE 180
Query: 389 EIALEFDGVEKAYAMESGRELRVIVKSNQVRDNQVPIIARKIAKKIEESAQYVGEVGVQV 448
+IA +DGV++AYA+++GRE+RV+V+ ++ D+++ ++A +I ++E+ Y G + + V
Sbjct: 181 DIAGSYDGVKQAYAIQAGREVRVMVEPGKISDDEITVLAHEIRDRVEKELDYPGNIKITV 240
Query: 449 VRESR 453
+RE R
Sbjct: 241 IREKR 245
>ref|NP_077915.1| (NC_002162) conserved hypothetical [Ureaplasma urealyticum]
sp|Q9PR60|Y085_UREPA Hypothetical protein UU085
pir||D82935 conserved hypothetical UU085 [imported] - Ureaplasma urealyticum
gb|AAF30490.1|AE002108_3 (AE002108) conserved hypothetical [Ureaplasma urealyticum]
Length = 473
Score = 199 bits (505), Expect = 7e-50
Identities = 142/441 (32%), Positives = 227/441 (51%), Gaps = 22/441 (4%)
Query: 16 QTHFDKKEAHLKHLEAQHKEFVRDEKRYLEKEKKELEKERQILEQEKENFKKQRAVCKES 75
QT F K K LE + ++ + ++ L+K + + +L++ ENF
Sbjct: 43 QTSFKKIVQKTKDLEEECED-LNNKNNELKKAISDQNLQIDLLKKNNENFLLNATSLTAE 101
Query: 76 QAKALDAMLNYMAYTKDEIKSMILEQLEEELEAQKSALIRRYEKEAKEEGKKKSYAILAE 135
QAK E+ +++ + ++EL AQ+ A I+ EA+E + IL E
Sbjct: 102 QAKK-------------ELFNLLKIKFKKEL-AQEYAKIKHEFNEAQEIYAQN---ILVE 144
Query: 136 ATARFAGNYAAENLTTRIALPCSDYIGRVIGKDGKNIEAFKKVSGVDIEFSEDSSELCLS 195
+ A E I + + G++IG+DG+N F+ GVD+ + +S
Sbjct: 145 TMEQIAEPLIVERSLFNIDIIDENLKGKIIGRDGRNKAVFENEGGVDLIVDRQQPIVGIS 204
Query: 196 SFNLYRREVASETLKILIEDGRIQPNRIEEVYHRVARNLEKELLSEGESVVLELELGAME 255
+ N RRE+A ++ LI+ I NRIE ++ EK++ G++VV E LG +
Sbjct: 205 TPNPIRREIARIVMQKLIDSKNIDINRIELLFKEEREKFEKKVFEIGKNVV-EQTLGFFD 263
Query: 256 --DELKILIGKMRYRSSFGQNALQHSKEVALLAGLIAEQLGGDKKLARRAGILHDIGKAL 313
+ + IG+M++R+S+GQN L HS EVA A IA+ + D A++A HDIGK +
Sbjct: 264 LPEGIYSYIGRMKFRNSYGQNILSHSLEVAEYAERIAKLINIDPIKAKKAAFFHDIGKTI 323
Query: 314 TQELGRDHVNLGVEVCKRHKEDPVVINAIYAHHGHEEILSVECASVCAADALSAGRPGAR 373
E DHV G+ + K+ D + NAI +HH ++ A V D LSA RPGAR
Sbjct: 324 DFESDLDHVEAGLLIAKKFNLDDYIYNAIESHHNKVIPTTIYGALVKIVDTLSAARPGAR 383
Query: 374 RKSDEEYAKRMQALEEIALEFDGVEKAYAMESGRELRVIVKSNQVRDNQVPIIARKIAKK 433
S +EY R++ LE I + F+GV+ AY ++SGR+LRVIV SN V D Q+ ++ +I
Sbjct: 384 VNSYDEYYSRVKELETICMRFEGVKSAYVIKSGRQLRVIVDSNLVSDEQLELLGHEIKVA 443
Query: 434 IEESAQYVG-EVGVQVVRESR 453
IEE+ ++ + +++E R
Sbjct: 444 IEENDLLTNYKIKIVLIKEKR 464
>gb|AAM34643.1| (AF495587) unknown [Leptospira interrogans]
Length = 193
Score = 150 bits (378), Expect = 4e-35
Identities = 75/181 (41%), Positives = 117/181 (64%)
Query: 174 AFKKVSGVDIEFSEDSSELCLSSFNLYRREVASETLKILIEDGRIQPNRIEEVYHRVARN 233
A + ++G+D+ + + LS F+ RRE+A TL+ LI DGRI P RIEE+ +
Sbjct: 8 ALESLTGIDVIIDDTPEVVVLSGFDPIRREIARMTLESLIADGRIHPARIEELVEKNRLE 67
Query: 234 LEKELLSEGESVVLELELGAMEDELKILIGKMRYRSSFGQNALQHSKEVALLAGLIAEQL 293
++ + GE+ E+ + +L ++G++++R+SFGQN L+HS EV LAG++A +L
Sbjct: 68 MDNRIREYGEAAAYEIGAPNLHPDLIKIMGRLQFRTSFGQNVLRHSVEVGKLAGILAGEL 127
Query: 294 GGDKKLARRAGILHDIGKALTQELGRDHVNLGVEVCKRHKEDPVVINAIYAHHGHEEILS 353
G + LARRAG LHD+GKA+ +E+ HV +G+E +++KE PVV+N I +HHG E S
Sbjct: 128 GENVALARRAGFLHDMGKAIDREVEGSHVEIGMEFARKYKEHPVVVNTIASHHGDVEPDS 187
Query: 354 V 354
V
Sbjct: 188 V 188
>ref|NP_109957.1| (NC_000912) nucleotide binding protein [Mycoplasma pneumoniae]
sp|P75506|Y130_MYCPN Hypothetical protein MG130 homolog (A65_orf493)
pir||S73890 hypothetical protein ysr1 homolog A65_orf493 - Mycoplasma
pneumoniae (strain ATCC 29342)
gb|AAB96212.1| (AE000056) nucleotide binding protein [Mycoplasma pneumoniae]
Length = 493
Score = 76.3 bits (186), Expect = 7e-13
Identities = 58/202 (28%), Positives = 97/202 (47%), Gaps = 7/202 (3%)
Query: 242 GESVVLELELGAMEDELKILIGKMRYRSSFGQNALQHSKEVALLAGLIAEQLGGDKKLAR 301
G+ V+ L + + +L G + +R SFGQN L H E L +A + +A
Sbjct: 267 GKQVLERLNIFEISPKLHKFFGLLAFRYSFGQNVLSHCLETGFLTAYLALLVNFKPDVAL 326
Query: 302 RAGILHDIGKALTQELGRDHVNLGVEVCKRHKEDPVVINAIYAHHGHEEILSVECASVCA 361
+ G+ HDIGKA + ++H G ++ + V I HH ++ + +V C
Sbjct: 327 KCGLYHDIGKADDENGKKNHTVTGAKIGDEFYFENDVKYTIANHH-NKNVDNVYCRLTQI 385
Query: 362 ADALSAGRPGARRKSDEEYAKRMQALEEIALEFDGVEKAYAM--ESGRELRVIVKSNQ-- 417
D LSAGR GAR S +++ Q L++I E K + +SGR L + +++NQ
Sbjct: 386 GDKLSAGRLGARSDSSVLFSQLKQELKQIVEETLAQFKTTILLGQSGRRLVIWLETNQHN 445
Query: 418 --VRDNQVPIIARKIAKKIEES 437
+ + Q+ +A I KI ++
Sbjct: 446 NIIDNQQLTDLATTIKSKIVQN 467
>ref|NP_072792.1| (NC_000908) conserved hypothetical protein [Mycoplasma genitalium]
sp|P47376|Y130_MYCGE Hypothetical protein MG130
pir||D64214 hypothetical protein homolog MG130 - Mycoplasma genitalium
gb|AAC71348.1| (U39693) conserved hypothetical protein [Mycoplasma genitalium]
Length = 484
Score = 71.2 bits (173), Expect = 2e-11
Identities = 61/236 (25%), Positives = 108/236 (44%), Gaps = 7/236 (2%)
Query: 208 TLKILIEDGRIQPNRIEEVYHRVARNLEKELLSEGESVVLELELGAMEDELKILIGKMRY 267
T++ ++ + + RIE + + G+ ++ L + L G + +
Sbjct: 226 TVRNILMNDYVDNERIESYVQQANFFFTEHCKKIGKEILESLNIFISSSSLHRHFGFLAF 285
Query: 268 RSSFGQNALQHSKEVALLAGLIAEQLGGDKKLARRAGILHDIGKALTQELGRDHVNLGVE 327
R SFGQN L HS E A L +A + D +L+ + G+LHDIGK+ H G +
Sbjct: 286 RYSFGQNVLSHSLETAFLTAHLAALIELDSELSLKCGLLHDIGKSNDDNGKESHTITGAK 345
Query: 328 VCKRHKEDPVVINAIYAHHGHEEILSVECASVCAADALSAGRPGARRKSDEEYAKRMQAL 387
+ ++ + P I A+H ++ I + C AD LSA R GAR S + + L
Sbjct: 346 LAEQF-QLPDDIKYTIANHHNKHIDNTYCRLTQIADKLSAARIGARSDSSLLFKQLKDEL 404
Query: 388 EEIA-LEFDGVEKAYAM-ESGRELRVIVKS---NQVRDN-QVPIIARKIAKKIEES 437
++I + + +SGR L + +++ NQ+ N Q+ + KI +I ++
Sbjct: 405 KKIVDKTINNFHTTILLGQSGRRLMIWLETKNQNQLLSNEQIIEMVEKIKAEIAKN 460
>ref|NP_404736.1| (NC_003143) TolA colicin import membrane protein [Yersinia pestis]
emb|CAC89966.1| (AJ414146) TolA colicin import membrane protein [Yersinia pestis]
Length = 388
Score = 53.5 bits (127), Expect = 5e-06
Identities = 41/148 (27%), Positives = 71/148 (47%), Gaps = 7/148 (4%)
Query: 14 QLQTHFDKKEAHLKHLEAQHKEFVRDEKRYLEKEKKEL-EKERQILEQEKENFKKQR--- 69
+LQ ++ LK LE + + D K E++KK++ E+++QI EQ+K+ ++Q+
Sbjct: 91 ELQQKQAAEQQRLKELEKERLQAQEDAKLAAEEQKKQVAEQQKQIAEQQKQAAEQQKIAA 150
Query: 70 ---AVCKESQAKALDAMLNYMAYTKDEIKSMILEQLEEELEAQKSALIRRYEKEAKEEGK 126
A KE Q +A A A +K+ Q + E EA+K A + K+ +
Sbjct: 151 AAVAKAKEEQKQAETAAAQAKAEADKIVKAQAEAQKKAEAEAKKEAAVAAAAKKQADADA 210
Query: 127 KKSYAILAEATARFAGNYAAENLTTRIA 154
KK+ + +A A A AA + + A
Sbjct: 211 KKAVEVAEKAAADAAEKKAAADAEKKAA 238
>ref|NP_084759.1| (NC_002693) Ycf1 protein [Oenothera elata subsp. hookeri]
emb|CAB67227.2| (AJ271079) Ycf1 protein [Oenothera elata subsp. hookeri]
Length = 2434
Score = 53.5 bits (127), Expect = 5e-06
Identities = 38/127 (29%), Positives = 71/127 (54%), Gaps = 13/127 (10%)
Query: 2 QIATAIWKTRIWQLQTHFDKKEAHLKHLEAQHKEFVRDEKRYLEKEKKELEKERQILEQE 61
+IA I K R +++ H K E ++ KE + + K+ +E EKK++E E + LE+E
Sbjct: 2040 RIAQLIEKKRQKEIEKHKRKIEKQMRK-----KEKIENAKKKIENEKKKIETEEEKLEKE 2094
Query: 62 KENFKKQRAVCKESQAKALDAMLNYMAYTKDEIKSMILEQLEEELEAQKSALIRRYEKEA 121
K ++++ K+ AK ++ + N +A K+ K++ E+L+ Q++ I R E+E
Sbjct: 2095 KRKKERKKEKLKKKVAKNIEKLKNKVA--KNVAKNI------EKLKKQRAKNIARLEEED 2146
Query: 122 KEEGKKK 128
K+ KK+
Sbjct: 2147 KKARKKR 2153
>ref|NP_071796.1| (NM_022401) plectin [Rattus norvegicus]
sp|P30427|PLE1_RAT Plectin 1 (PLTN) (PCN)
pir||A39638 plectin - rat
emb|CAA42169.1| (X59601) plectin [Rattus norvegicus]
Length = 4687
Score = 52.0 bits (123), Expect = 1e-05
Identities = 105/445 (23%), Positives = 182/445 (40%), Gaps = 48/445 (10%)
Query: 21 KKEAHLKHLEAQHKEFVRDEKRYLEKEKKELEKERQILEQEKENFKKQRAVCKESQAKAL 80
+K+ L AQ + E L E ++ E +RQ+LE+E + + A + + L
Sbjct: 1835 EKQRQLTEGTAQQRLAAEQELIRLRAETEQGEHQRQLLEEELARLQHE-ATAATQKRQEL 1893
Query: 81 DAMLNYMAYTKDEIKSMILEQLEEELEAQKSALIRRYEKEAKEEGKKKSYAILAEATARF 140
+A L A + E++ ++ + E E++ ++ + EA E G+ + LAE AR
Sbjct: 1894 EAEL---AKVRAEMEVLLASKARAEEESRSTSEKSKQRLEA-EAGR---FRELAEEAARL 1946
Query: 141 AGNYAAENLTTRIALPCSDYIGRVIGKDGKNIEAFKKVSGVDIEFSEDSSELCLSSFNLY 200
AE L D + DG E +S E + +E + L
Sbjct: 1947 RA--LAEEARRHRELAEEDAARQRAEADGVLTEKLAAIS----EATRLKTE---AEIALK 1997
Query: 201 RREVASETLKILIEDGRIQPNRIEEVYHRVARNLEKEL--LSEGESVVLELELGAMEDEL 258
+E +E L+ L ED Q R+EE + ++E+ L L + LE + G +ED L
Sbjct: 1998 EKEAENERLRRLAEDEAFQRRRLEEQAAQHKADIEERLAQLRKASESELERQKGLVEDTL 2057
Query: 259 K----ILIGKMRYRSSFGQNALQHSKEVALLAGLI---AEQLGGDKKLARRAGILHDIGK 311
+ + M ++SF + A E+ L G I AE K+LA
Sbjct: 2058 RQRRQVEEEIMALKASF-EKAAAGKAELELELGRIRSNAEDTMRSKELAE---------- 2106
Query: 312 ALTQELGRDHVNLGVEVCKRHKEDPVVINAIYAHHGHEEILSVECASVCAADALSAGRPG 371
QE R E +R + + V ++ A EE ++ + L A
Sbjct: 2107 ---QEAARQRQLAAEEEQRRREAEERVQRSLAA---EEEAARQRKVALEEVERLKAKVEE 2160
Query: 372 ARR---KSDEEYAKRMQALEEIALE-FDGVEKAYAMESGRELRVIVKSNQVRDNQVPIIA 427
ARR ++++E A+++Q +E A + EKA+A + + ++ Q N + +
Sbjct: 2161 ARRLRERAEQESARQLQLAQEAAQKRLQAEEKAHAFVVQQREEELQQTLQQEQNMLERL- 2219
Query: 428 RKIAKKIEESAQYVGEVGVQVVRES 452
R A+ +A+ E Q RE+
Sbjct: 2220 RSEAEAARRAAEEAEEAREQAEREA 2244
>ref|XP_115620.1| (XM_115620) similar to trichohyalin [Homo sapiens]
Length = 1600
Score = 50.8 bits (120), Expect = 3e-05
Identities = 74/321 (23%), Positives = 142/321 (44%), Gaps = 44/321 (13%)
Query: 21 KKEAHLKHLEAQHK-EFVRDEKRYLEKEKKELEKERQILEQEKEN--FKKQRAVCKESQA 77
K+E + +E K + + +K+ L +EKK L +E++ L Q KEN + K+R + Q
Sbjct: 605 KRERWINSMEELTKNKMILYQKKNLAQEKKNLAQEKEKLAQRKENLLYNKERLTHSKKQL 664
Query: 78 KALDAMLNYMAYTKDEIKSMILEQLEEELEAQKSALIRRYEKEAKEEGKKKSYAILAEAT 137
+ L + IL Q+EE+L +K +I++ EK A+ E K + ++
Sbjct: 665 VQVKNKLGMF--------NKILAQVEEKLTQEKETVIKKKEKLAETE---KKLVQVEDSL 713
Query: 138 ARFAGNYAAENLTTRIALPCSDYIGRVIGKDGKNIEAFKKVSGVDIEFSEDSSELCLSSF 197
A+ A E + ++AL + ++ K++ G +++ +++ L
Sbjct: 714 AKKQEKLAQEKM--KLAL------------EKAMVQGKKRLRG-ELDIAKEEKAL----- 753
Query: 198 NLYRREVASETLKIL-----IEDGRIQPNRIEEVYHRVARNLEKELLSEGESVVLELELG 252
NL + +A E ++++ + G + +V + L + LS E ++L +
Sbjct: 754 NLEMKRLAEEKMRLVEGKETLSKGETPETSRQRKMTQVEQELFERKLSLEEKILLHEDRI 813
Query: 253 AMEDELKILIGKMRYRSSFGQNALQHSKEVALLAGLIAEQLGGDKKLARRAGILHDIGKA 312
+E +I GK+ + + GQ + LA + + + L++ L+ I KA
Sbjct: 814 LAMEESEIAKGKLEF--TRGQRIFVQGQR--KLAKASRKLIKKRESLSKEPAKLNKILKA 869
Query: 313 LTQELGRDHVNLGVEVCKRHK 333
L Q+L RD L E K K
Sbjct: 870 L-QKLTRDERKLTQEEIKMTK 889
>ref|NP_614988.1| (NC_003552) chemotaxis sensor histidine kinase [Methanosarcina
acetivorans str. C2A] [Methanosarcina acetivorans C2A]
gb|AAM03468.1| (AE010657) chemotaxis sensor histidine kinase [Methanosarcina
acetivorans str. C2A] [Methanosarcina acetivorans C2A]
Length = 635
Score = 50.8 bits (120), Expect = 3e-05
Identities = 60/262 (22%), Positives = 113/262 (42%), Gaps = 43/262 (16%)
Query: 32 QHKEFVRDEKRYLEKEKKELEKERQILEQEKENFKKQRAVCKESQAKALDAMLNYMAYTK 91
+ F D+KR + EKKE E E++ E++ KK+ KE + + +
Sbjct: 151 ESNSFSADKKREGKAEKKEAEVEKEKKTNERKEDKKETEKRKEEKEEEKEEEKEEKQL-- 208
Query: 92 DEIKSMILEQLEEELEAQKSAL-------IRRYEKEAKEEGKKKSYAILAEATARFAGNY 144
+ I+ LE++ EEL+ +K+ ++R + ++ K +S I
Sbjct: 209 ENIEDKELERINEELKEKKNCTDSGPDFKVKRVQSSRMQDSKPQSPKI------------ 256
Query: 145 AAENLTTRIALPCSDYIGRVIGKDGKNIEAFKKVSGVDIEFSEDSSELCLSSFNLYRREV 204
++RI+ D + ++G+ N K+++G E EL LS F RE+
Sbjct: 257 ----QSSRISTEQLDKLMNLVGELVINRSRVKELTG---ESKSKDLELALSEFQKLTREL 309
Query: 205 ASETLKILIEDGRIQPNRIEEVYHRVARNLEKELLSEGESVV----LELELGAMEDELKI 260
E L+I + + + I ++ R+ RNL +E + V+ ++L+ ME+
Sbjct: 310 QEEVLEIRM----VPLDHITNIFPRMIRNLAREQNKKINLVIRGKEIKLDRAIMEEIGDP 365
Query: 261 LIGKMRYRSSFGQNALQHSKEV 282
L+ +R NA+ H E+
Sbjct: 366 LVHLLR-------NAVDHGIEL 380
>ref|NP_000436.1| (NM_000445) plectin 1, intermediate filament binding protein, 500kD
[Homo sapiens]
pir||G02520 plectin - human
gb|AAB05427.1| (U53204) plectin [Homo sapiens]
gb|AAB05428.1| (U63610) plectin [Homo sapiens]
Length = 4574
Score = 50.4 bits (119), Expect = 4e-05
Identities = 100/445 (22%), Positives = 189/445 (42%), Gaps = 48/445 (10%)
Query: 21 KKEAHLKHLEAQHKEFVRDEKRYLEKEKKELEKERQILEQEKENFKKQRAVCKESQAKAL 80
+K+ L AQ + E L E ++ E++RQ+LE+E +++ A + + + L
Sbjct: 1722 EKQRQLAEGTAQQRLAAEQELIRLRAETEQGEQQRQLLEEELARLQREAAAATQKR-QEL 1780
Query: 81 DAMLNYMAYTKDEIKSMILEQLEEELEAQKSALIRRYEKEAKEEGKKKSYAILAEATARF 140
+A L A + E++ ++ + E E++ ++ + EA E G+ + LAE AR
Sbjct: 1781 EAEL---AKVRAEMEVLLASKARAEEESRSTSEKSKQRLEA-EAGR---FRELAEEAARL 1833
Query: 141 AGNYAAENLTTRIALPCSDYIGRVIGKDGKNIEAFKKVSGVDIEFSEDSSELCLSSFNLY 200
AE + L D + + + + A K + + + +E+ L
Sbjct: 1834 RA--LAEEAKRQRQLAEEDAARQ--RAEAERVLAEKLAAIGEATRLKTEAEIALK----- 1884
Query: 201 RREVASETLKILIEDGRIQPNRIEEVYHRVARNLEKEL--LSEGESVVLELELGAMEDEL 258
+E +E L+ L ED Q R+EE + ++E+ L L + LE + G +ED L
Sbjct: 1885 EKEAENERLRRLAEDEAFQRRRLEEQAAQHKADIEERLAQLRKASDSELERQKGLVEDTL 1944
Query: 259 K----ILIGKMRYRSSFGQNALQHSKEVALLAGLIAEQLGGDKKLARRAGILHDIGKALT 314
+ + + ++SF + A E+ L G I + +A +
Sbjct: 1945 RQRRQVEEEILALKASF-EKAAAGKAELELELGRIRSNAEDTLRSKEQAEL--------- 1994
Query: 315 QELGRDHVNLGVEVCKRHKEDPVVINAIYAHHGHEEILSVECASVCAADALSAGRPGARR 374
E R E +R + + V ++ A EE A++ + L A ARR
Sbjct: 1995 -EAARQRQLAAEEERRRREAEERVQKSLAA---EEEAARQRKAALEEVERLKANVEEARR 2050
Query: 375 ---KSDEEYAKRMQALEEIALE-FDGVEKAYA---MESGRELRVIVKSNQVRDNQVPIIA 427
++++E A+++Q +E A + EKA+A + +EL+ ++ Q +Q+
Sbjct: 2051 LRERAEQESARQLQLAQEAAQKRLQAEEKAHAFAVQQKEQELQQTLQQEQSVLDQL---- 2106
Query: 428 RKIAKKIEESAQYVGEVGVQVVRES 452
R A+ +A+ E VQ RE+
Sbjct: 2107 RGEAEAARRAAEEAEEARVQAEREA 2131
>ref|NP_142454.1| (NC_000961) hypothetical protein [Pyrococcus horikoshii]
pir||G71159 hypothetical protein PH0476 - Pyrococcus horikoshii
dbj|BAA29564.1| (AP000002) 356aa long hypothetical protein [Pyrococcus horikoshii]
Length = 356
Score = 49.7 bits (117), Expect = 7e-05
Identities = 75/326 (23%), Positives = 140/326 (42%), Gaps = 39/326 (11%)
Query: 4 ATAIWKTRIWQLQTHFDKKEAHLKHLEAQHKEFVRD-EKR--YLEKEKKELEKERQILEQ 60
A A + +I + + + EA + +++ + + + +KR +LEKE KE++ + ILE+
Sbjct: 50 ARASLQEKIEEFRREIKEAEARINNVKEETTKRIEGFDKRLSHLEKEFKEIKGKMNILER 109
Query: 61 EKENFKKQRAVCKESQAKALDAMLNYMAYTKDEIKSMILEQLEEELEAQKSALIRRYEKE 120
+ K+ + L + K+ +KS ILE+L EE+E + L ++ ++E
Sbjct: 110 LYDKVKELSESINSIEPDKLREDV------KESVKSEILEELREEIENFEEMLEKKKDEE 163
Query: 121 AKEEGKKKSYAILAEATARFAGNYAAENL-TTRIALPCSDYIGRVIGKDGKNIEAFKKVS 179
KE + + + + L ++ L I +V GK +E F+K+
Sbjct: 164 LKE------FLDILTISIDLPPERVKDGLMQAKLGLLSLRDISKVYVLTGKGVEEFEKLK 217
Query: 180 GVDIEFSEDSSELCLSSFNLYRREVASETLKILI----------EDGR-IQPNRIEEVYH 228
+E ++ +L + + + +V SE +++ EDG+ + P + H
Sbjct: 218 ENLVELLKEIRKLAVIA--VPEDDVYSELTSVIVGLRRLRLPMEEDGKELPPEKSFIRIH 275
Query: 229 RVARNLEKELLSEGESVVLELELGAMEDE----LKILIGKMRYRSSFGQNALQHSKEVAL 284
+L +L S E V + + +E E LKI ++ Q L A
Sbjct: 276 NQIYDLTSKLDSVAEKVEGPIPVTPIEKEFYEKLKIQFENLKKLEKQVQELL------AT 329
Query: 285 LAGLIAEQLGGDKKLARRAGILHDIG 310
L G I E+ +KKL IL D+G
Sbjct: 330 LGGDIEEEDRKEKKLDEIKKILEDLG 355
>dbj|BAA36703.2| (AB016537) M23 [Streptococcus pyogenes]
Length = 500
Score = 48.9 bits (115), Expect = 1e-04
Identities = 42/123 (34%), Positives = 64/123 (51%), Gaps = 8/123 (6%)
Query: 21 KKEAHLKHLE-AQHKEFVR--DEKRYLEKEKKELEKERQILEQEKENFKKQRAVCKESQA 77
+KE L+ L+ A KE + D K LE EK+E E +RQILE EK+ ++Q + E+
Sbjct: 207 EKEEKLRELDLALGKEHIDNIDLKHQLETEKREAEAQRQILENEKKKLEEQNKI-SEASR 265
Query: 78 KALDAMLNYMAYTKDEIKS--MILEQLEEELEAQKSALIRRYEKEAKEEGKKKSYAILAE 135
K L L+ K ++++ LE+ + EA + L R + +A E KK+ LA
Sbjct: 266 KGLRRDLDASREAKKQLEAEHQKLEEQNKISEASRKGL--RRDLDASREAKKQVEKDLAN 323
Query: 136 ATA 138
TA
Sbjct: 324 LTA 326
Score = 46.6 bits (109), Expect = 6e-04
Identities = 70/280 (25%), Positives = 117/280 (41%), Gaps = 44/280 (15%)
Query: 21 KKEAHLKHLE-AQHKEFVR--DEKRYLEKEKKELEKERQILEQEKENFKKQ--------- 68
+KE L+ L+ A KE + D K LE EK+E E +RQILE EK+ +++
Sbjct: 140 EKEEKLRELDLALGKEHIDNIDLKHQLETEKREAEAQRQILENEKKKLEEELANKNTTLD 199
Query: 69 ---RAVC-KESQAKALDAMLNYMAYTKDEIKSMILEQLEEELEAQKSALIRRYEK----- 119
RA+ KE + + LD L ++K LE + E EAQ+ L +K
Sbjct: 200 GALRAITEKEEKLRELDLALGKEHIDNIDLKHQ-LETEKREAEAQRQILENEKKKLEEQN 258
Query: 120 ---EAKEEGKKKSYAILAEATARFAGNY----------AAENLTTRIALPCSDYIGRVIG 166
EA +G ++ EA + + A R L S + +
Sbjct: 259 KISEASRKGLRRDLDASREAKKQLEAEHQKLEEQNKISEASRKGLRRDLDASREAKKQVE 318
Query: 167 KDGKNIEAFKKVSGVDIEFSEDSSELCLSSFNLYRREV-ASETLKILIEDGRIQPNRIEE 225
KD N+ A +++ ++ ++ +S RR++ AS K +E + N
Sbjct: 319 KDLANLTA-------ELDKVKEEKQISDASRQGLRRDLDASREAKKQVEKALEEANSKLA 371
Query: 226 VYHRVARNLEK-ELLSEGESVVLELELGAMEDELKILIGK 264
++ + LE+ + L+E E L+ +L A LK + K
Sbjct: 372 ALEKLNKELEESKKLTEKEKAELQAKLEAEAKALKEQLAK 411
Score = 45.8 bits (107), Expect = 0.001
Identities = 42/137 (30%), Positives = 65/137 (46%), Gaps = 17/137 (12%)
Query: 9 KTRIWQLQTHFDKKEAHLKHLE-AQHKEFVRDE--KRYLEKEKKELEKERQILEQEKENF 65
+ R+ +LQ KE L+ L+ A KE + + K LE EK+E E +RQILE EK+
Sbjct: 61 RKRVARLQAELKTKEEKLRKLDLALGKEHIDNIALKHQLETEKREAEAQRQILENEKKKL 120
Query: 66 KKQ------------RAVC-KESQAKALDAMLNYMAYTKDEIKSMILEQLEEELEAQKSA 112
+++ RA+ KE + + LD L ++K LE + E EAQ+
Sbjct: 121 EEELANKNTTLDGALRAITEKEEKLRELDLALGKEHIDNIDLKHQ-LETEKREAEAQRQI 179
Query: 113 LIRRYEKEAKEEGKKKS 129
L +K +E K +
Sbjct: 180 LENEKKKLEEELANKNT 196
>dbj|BAB07943.1| (AP002487) putative eukaryotic translation initiation factor 3
large subunit [Oryza sativa (japonica cultivar-group)]
Length = 984
Score = 48.1 bits (113), Expect = 2e-04
Identities = 35/100 (35%), Positives = 55/100 (55%), Gaps = 6/100 (6%)
Query: 29 LEAQHKEFVRDEKRYLEKEKKELEKERQILEQEKENFKKQRAVCKESQAKALDAMLNYMA 88
+E +HK + K +EK K++LE RQILE+EKE KK+ +V K+S +LN +
Sbjct: 557 VENEHKRLLA-RKSIIEKRKEDLE--RQILEKEKEEEKKRLSVLKKSAEDERIRLLNDVK 613
Query: 89 YTKDEIKSMILEQLEEELEAQKSALIRRYEKEAKEEGKKK 128
+ E I QL E+ + + L+++ KE + G KK
Sbjct: 614 LREQE---RIRRQLVEKEKIEAEELLQKQIKEIAKRGGKK 650
>ref|NP_228975.1| (NC_000853) ABC transporter, periplasmic substrate-binding
protein/conserved hypothetical protein [Thermotoga
maritima]
pir||E72285 ABC transporter, periplasmic substrate-binding protein/ conserved
hypothetical protein - Thermotoga maritima (strain MSB8)
gb|AAD36245.1|AE001774_2 (AE001774) ABC transporter, periplasmic substrate-binding
protein/conserved hypothetical protein [Thermotoga
maritima]
Length = 618
Score = 47.8 bits (112), Expect = 3e-04
Identities = 82/356 (23%), Positives = 134/356 (37%), Gaps = 93/356 (26%)
Query: 86 YMAYTKDEIKSMILEQLEEELEAQKSALIRRYEK-EAKEEGKKKSYAILAEATARFAGNY 144
Y K E +++ L++ EEL+AQ + Y++ A +E +K Y + E RF
Sbjct: 269 YSLRRKVEERTLQLKEANEELKAQNEEIEDLYQEVSASQEELEKLYGEIRELDERFR--- 325
Query: 145 AAENLTTRIALPCSDYIGRVIGKDGKNIEAFKKVSGVDIEFSEDSSELCLSSFNLYRREV 204
E+ ++++ + F +D S + + +
Sbjct: 326 ----------------------------ESVRRMA--KLVFIKDKSRFSFEVGQIVKYLL 355
Query: 205 ASETLKILIEDGRIQPNRIEEVYHRVARNLEKELLSEGESVVLELELGAMEDELKILIGK 264
+ LK++++D P ++E ++ + EK E + E E G +E L I+
Sbjct: 356 NVKNLKVILDDRA--PEKVEGTVFEISHSNEKHGYIVLEGDLSEDEKGVLESLLTIVSAI 413
Query: 265 MRYRSSFGQN-------------ALQ--------HSKEVALLAGLIAEQLG-GDKKLARR 302
YR + AL+ HS+E A A I GD+KL +
Sbjct: 414 YTYRKLISRERKLYRDIVKTWVKALEYYDYYTKGHSEEAAYYAVEIGRMFDLGDEKLEKL 473
Query: 303 --AGILHDIGKALTQ---------------ELGRDHVNLGVEVCKRHKEDPVVINAIYAH 345
AG+LHDIGK EL + H G E+ K + V AI+
Sbjct: 474 YWAGLLHDIGKIYVPQVVLNKTSKLDEREFELIKIHPVRGYELVKEIEGFEDV--AIWIR 531
Query: 346 HGHE-------------EILSVECASVCAAD---ALSAGRPGARRKSDEEYAKRMQ 385
H HE E + E +C AD A+ + RP R KS EE + ++
Sbjct: 532 HHHERWDGKGYPDGLKGEEIPFEARVLCVADSYQAMRSDRPYKRGKSVEESIQELR 587
>ref|NP_213438.1| (NC_000918) chromosome assembly protein homolog [Aquifex aeolicus]
pir||B70356 chromosome assembly protein homolog - Aquifex aeolicus
gb|AAC06839.1| (AE000699) chromosome assembly protein homolog [Aquifex aeolicus]
Length = 1156
Score = 47.8 bits (112), Expect = 3e-04
Identities = 65/261 (24%), Positives = 115/261 (43%), Gaps = 45/261 (17%)
Query: 19 FDKKEAHLKHLEAQHKEFVRD------EKRYLEKEKKELEKERQILEQEKENFKKQRAVC 72
+ K + +E E R+ E YLEKE +E E+ER+ L + ++ KK+
Sbjct: 787 YSKVRKQVSEIEKSLNEIERELNKKTYELEYLEKEIQEKEREREYLTERIKSLKKEIENL 846
Query: 73 KESQAKALDAMLNYMAYTKDEIKSMILEQLEEELEAQKSAL--IRRYEKEAKEE--GKKK 128
+ K L + D IK E+LE+E+ KS L ++ E+E KE+ K+K
Sbjct: 847 ILFKEKTLQEVKEAEVKVYDYIKQK--EELEKEILNLKSKLGKLKIKEEELKEKIFEKEK 904
Query: 129 SYAILAEATARFAGNYAAENLTTRIALPCSDYIGRVIGKDGKNI-----------EAFKK 177
+ +L E ENL + +Y +G D ++I E +K
Sbjct: 905 NLKVLEE---------KIENLNEEL----KEYEDLKLGADEESIPKLKEKLKRVTEEIQK 951
Query: 178 VSGVDIEFSEDSSELCLSSFNLYRR-----EVASETLKILIEDGRIQPNRI-EEVYHRVA 231
+ V+ ED +E L FN Y+ + S+ +K LIE+ + ++ E ++++
Sbjct: 952 LGSVNFRAEEDYAEE-LKRFNDYKEKQQKLKEESKAIKKLIEETENKKRKVFLEAFNQIN 1010
Query: 232 RNLEK--ELLSEGESVVLELE 250
++L++ LS G + L+
Sbjct: 1011 KSLKRIFSFLSPGGKAQMFLD 1031
>sp|Q15149|PLE1_HUMAN Plectin 1 (PLTN) (PCN) (Hemidesmosomal protein 1) (HD1)
emb|CAA91196.1| (Z54367) plectin [Homo sapiens]
Length = 4684
Score = 47.8 bits (112), Expect = 3e-04
Identities = 96/449 (21%), Positives = 173/449 (38%), Gaps = 47/449 (10%)
Query: 21 KKEAHLKHLEAQHKEFVRDEKRYLEKEKKELEKERQILEQEKENFKKQRAVCKESQAKAL 80
+K+ L AQ + E L E ++ E++RQ+LE+E +++ A + + + L
Sbjct: 1832 EKQRQLAEGTAQQRLAAEQELIRLRAETEQGEQQRQLLEEELARLQREAAAATQKR-QEL 1890
Query: 81 DAMLNYMAYTKDEIKSMILEQLEEELEAQKSALIRRYEKEAKEEGKKKSYAILAEATARF 140
+A L A + E++ ++ + + E E++ ++ + EA E G+ + LAE AR
Sbjct: 1891 EAEL---AKVRAEMEVLLASKAKAEEESRSTSEKSKQRLEA-EAGR---FRELAEEAARL 1943
Query: 141 AGNYAAENLTTRIALPCSDYIGRVIGKDGKNIEAFKKVSGVDIEFSEDSSELCLSSFNLY 200
AE + L D + + + + A K + + + +E+ L
Sbjct: 1944 RA--LAEEAKRQRQLAEEDAARQ--RAEAERVLAEKLAAIGEATRLKTEAEIALK----- 1994
Query: 201 RREVASETLKILIEDGRIQPNRIEEVYHRVARNLEKEL--LSEGESVVLELELGAMEDEL 258
+E +E L+ L ED Q R+EE + ++E+ L L + LE + G +ED L
Sbjct: 1995 EKEAENERLRRLAEDEAFQRRRLEEQAAQHKADIEERLAQLRKASDSELERQKGLVEDTL 2054
Query: 259 ------------------KILIGKMRYRSSFGQ---NA--LQHSKEVALLAGLIAEQLGG 295
K GK G+ NA SKE A L QL
Sbjct: 2055 RQRRQVEEEILALKASFEKAAAGKAELELELGRIRSNAEDTLRSKEQAELEAARQRQLAA 2114
Query: 296 DKKLARRAGILHDIGKALTQELGRDHVNLGVEVCKRHKEDPVVINAIYAHHGHEEILSVE 355
+++ RR +E +E +R K ++ E ++
Sbjct: 2115 EEERRRREAEERVQKSLAAEEEAARQRKAALEEVERLKAKVEEARSLRERAEQESARQLQ 2174
Query: 356 CASVCAADALSAGRPG---ARRKSDEEYAKRMQALEEIALEFDGVEKA--YAMESGRELR 410
A A L A A ++ ++E + +Q + + G +A A E E R
Sbjct: 2175 LAQEAAQKRLQAEEKAHAFAVQQKEQELQQTLQQEQSVLDRLRGEAEAARRAAEEAEEAR 2234
Query: 411 VIVKSNQVRDNQVPIIARKIAKKIEESAQ 439
V + + + A ++ + EE AQ
Sbjct: 2235 VQAEREAAQSRRQVEEAERLKQSAEEQAQ 2263
>ref|NP_654492.1| (NC_003995) Band_7, SPFH domain / Band 7 family [Bacillus anthracis
A2012] [Bacillus anthracis str. A2012]
Length = 483
Score = 47.4 bits (111), Expect = 4e-04
Identities = 36/121 (29%), Positives = 62/121 (50%), Gaps = 14/121 (11%)
Query: 31 AQHKEFVRDEKRYLEKEKKELEKER--QILEQEKENFKKQRAVCKESQAKALDAMLNY-- 86
A+ ++ R EK EKE KE E +R QI E EK K ++ +E + DA L+Y
Sbjct: 216 AEREKEARIEKARAEKEAKEAEYQRDAQIAEAEKHKELKVQSYKREQEQARADADLSYEL 275
Query: 87 ------MAYTKDEIKSMILEQLEEELEAQKSALIRR---YEKEAKEEGKKKSYAILAEAT 137
T+++++ I+E+ E+++E ++ + RR Y+ E K++ YA+ A
Sbjct: 276 QQAKAQQGVTEEQMRVKIIER-EKQIELEEKEIARREKQYDAEVKKKADADRYAVEQSAE 334
Query: 138 A 138
A
Sbjct: 335 A 335
>ref|NP_072785.1| (NC_000908) conserved hypothetical protein [Mycoplasma genitalium]
sp|P47369|Y123_MYCGE Hypothetical protein MG123
pir||F64213 hypothetical protein homolog MG123 - Mycoplasma genitalium
gb|AAC71341.1| (U39692) conserved hypothetical protein [Mycoplasma genitalium]
Length = 471
Score = 47.0 bits (110), Expect = 5e-04
Identities = 63/283 (22%), Positives = 114/283 (40%), Gaps = 40/283 (14%)
Query: 14 QLQTHFDKKEAHLKHLEAQHKEFVRDEKRYLEKEKKELEKERQILEQEKENFKKQRAVCK 73
Q+Q +K+A L L F + + + +EK LE + Q+++ K++ K+ + +
Sbjct: 55 QIQLRLTEKQAQLTTL----LNFYQQKIESVNREKSWLESQLQVID--KKDLKQAQKLTL 108
Query: 74 ESQAKALDAMLNYMAYTKDEIKSMILEQLEEELEAQKSALIRRY--EKEAKEEGKKKSYA 131
+ + A LN + I+ + + L EL+ K + + R +K E KS
Sbjct: 109 HLKKDQILAQLN-----EKLIQKKVDQPLVNELQKTKLSYLERLVDQKIKLSENNFKSAF 163
Query: 132 ILAEATARFAGNYAAENLTTRIALPCSDYIGRVIGKDGKNIEAFKKVSGVDIEFS--EDS 189
+ + +AA+N N E FK+V D ED
Sbjct: 164 LKTKVKETAFNIFAAKNKV--------------------NWEYFKQVCDADCTLKNLEDE 203
Query: 190 SELCLSSFNLYRRE---VASETLKILIEDGRIQPNRIEEVYHRVARNLEKELLSEGESVV 246
E+ S+++ RR +A E L I+ +I I E V + + GE +V
Sbjct: 204 VEITFSNWSYLRRMQALLAFEKLISKIKTVKINELVINETLDEVKNEISQTAFQAGEKIV 263
Query: 247 LELELGAMEDELKILIGKMRYRSSFGQNALQHSKEVALLAGLI 289
E ++ + +++ LIG +Y FG + L + L L+
Sbjct: 264 KEFQITNLNEQITRLIGLQKY--YFGTDQLNLLELAVLTTKLV 304
>ref|NP_497706.1| (NM_065305) F59A2.6.p [Caenorhabditis elegans]
pir||T22976 hypothetical protein F59A2.6 - Caenorhabditis elegans
emb|CAA84332.1| (Z34801) Similarity with drosohila MSP-300 protein (PIR acc. no.
S30431), contains similarity to Pfam domain: PF01465
(GRIP domain), Score=90.2, E-value=1.4e-23, N=1
[Caenorhabditis elegans]
emb|CAA91344.1| (Z66514) Similarity with drosohila MSP-300 protein (PIR acc. no.
S30431), contains similarity to Pfam domain: PF01465
(GRIP domain), Score=90.2, E-value=1.4e-23, N=1
[Caenorhabditis elegans]
Length = 1133
Score = 47.0 bits (110), Expect = 5e-04
Identities = 101/461 (21%), Positives = 200/461 (42%), Gaps = 47/461 (10%)
Query: 15 LQTHFDKKEAHLKHLEAQHKEFVRDEKRYLEKEKKELEKERQILEQEKENFKKQRAVCKE 74
LQ ++ +A + ++A++ + + +R + ELE+ +++LE EK+ F+ ++ +E
Sbjct: 60 LQAEVNEAKALREEIQAKYDDVTQKAERI----QGELEESKKVLESEKQAFENEKEQERE 115
Query: 75 SQ-AKALDAMLNYMAYTKDEIKSMILEQLEEELEAQKSALIRRYEKEAKEEGKKKSYAIL 133
Q AKA++ LN DE+ LEQ EEE+ A + A+ EK + E + +
Sbjct: 116 EQLAKAME-KLNSEQNILDEVTKK-LEQSEEEVLAARGAIQELTEKLEESEKETSTAKTE 173
Query: 134 AEATAR--FAGNYAAENLTTRIALPCSDYIGRVIGKDGKNIEAFK-KVSGVDIEFS--ED 188
EA ++ + + + + I I KD + +E K K+ V+ S E
Sbjct: 174 LEAVSKKLDSSETSLKEFSDMIEAMKIQLINCEKQKD-EAVELLKQKLEEVEKNMSDVEV 232
Query: 189 SSELCLSS--FNLYRREVASETLKILIEDGRIQPNRIEEVYHRVARNLEKELLSEGESVV 246
+L L S + + A+E +K +E+ + +++ RNL+ L S+ S +
Sbjct: 233 QKQLLLESTTSEMKQHAEAAEIVKKQLEEAQSSIENLKKDAEN-ERNLKTALESDESSAI 291
Query: 247 LEL---------ELGAME---DELKILIGKMRYRSSFGQNALQHSKEVALLAGLIAEQLG 294
E+ EL A E EL+ + +++ + GQ +Q ++ L +
Sbjct: 292 SEITKQMEAAKKELEASEKEKSELREQMDRLQKVHNAGQEDIQKLQKTWELEMAKIAKST 351
Query: 295 GDKKLARR--AGILHDIGKALTQELGRDHVNLGVEVCK-----RHKEDPVVINAIYAHHG 347
D+KLAR AG L + + L ++ + + G++ + KE V+ +
Sbjct: 352 EDEKLAREQLAGELENAKEDL--KVVEEEKHTGIQRAQGALDDAEKEVKVLKEQLERAQS 409
Query: 348 HEEILSVECASVCAAD---ALSAGRPGARRKSDEEYAKRMQALEEIALEFDG------VE 398
E S E AS AD L A+++S EE + + + + +
Sbjct: 410 ALE-SSQELASSQKADKIQELEKELQNAQKRSSEELETANEMVRSLTATLENSNSETEIL 468
Query: 399 KAYAMESGRELRVIVKSNQVRDNQVPIIARKIAKKIEESAQ 439
K +EL+ ++ + ++ ++ +A+K +++AQ
Sbjct: 469 KQKLETLDKELQARQQTEKALTEEINVLTTSLAEKEQQTAQ 509
>sp|P13050|ARP4_STRPY IgA receptor precursor
pir||S05568 IgA receptor precursor - Streptococcus pyogenes
emb|CAA33269.1| (X15198) Arp4 protein [Streptococcus pyogenes]
Length = 386
Score = 47.0 bits (110), Expect = 5e-04
Identities = 38/132 (28%), Positives = 69/132 (51%), Gaps = 6/132 (4%)
Query: 8 WKTRIWQLQTHFDKKEAHLKHLEAQHKEFVRDEKRYLEKEKKELEKERQILEQEKENFKK 67
++ +I +L+ +K+ + LE Q++ + +K Y E++KK ++E+Q LE EK+ K
Sbjct: 106 YQDKIEELEKERKEKQERQEQLERQYQ--IEADKHYQEQQKKH-QQEQQQLEAEKQKLAK 162
Query: 68 QRAVCKES-QAKALDAMLNYMAYTKDEIKSMILEQLEEELEAQKSALIRRYEKEAKEEGK 126
+ + S Q + D + A + E + L++ ++ +A + L R + EA E K
Sbjct: 163 DKQISDASRQGLSRDLEASRAAKKELEAEHQKLKEEKQISDASRQGLSR--DLEASREAK 220
Query: 127 KKSYAILAEATA 138
KK A LA TA
Sbjct: 221 KKVEADLAALTA 232
>ref|NP_394389.1| (NC_002578) conserved hypothetical protein [Thermoplasma
acidophilum]
emb|CAC12060.1| (AL445066) conserved hypothetical protein [Thermoplasma
acidophilum]
Length = 339
Score = 46.6 bits (109), Expect = 6e-04
Identities = 30/92 (32%), Positives = 47/92 (50%), Gaps = 4/92 (4%)
Query: 256 DELKILIGKMRYRSSFGQNALQHSKEVALLAGLIAEQLGGDKKLARRAGILHDIGKALTQ 315
DE++ L +Y +S + ++H K V LA IAE+ DK++ +LHDIG+ T
Sbjct: 171 DEIECLDLLKKYGAS--EQLIEHVKAVEGLALKIAERCNADKRVIVAGSLLHDIGRTRTN 228
Query: 316 ELGRDHVNLGVEVCKRHKEDPVVINAIYAHHG 347
G DH G E+ + V++A+ H G
Sbjct: 229 --GIDHAVAGAEILRSENIHDSVVSAVERHIG 258
>ref|NP_653321.1| (NM_144720) hypothetical protein FLJ31564 [Homo sapiens]
dbj|BAB71098.1| (AK056126) unnamed protein product [Homo sapiens]
Length = 626
Score = 46.2 bits (108), Expect = 8e-04
Identities = 47/206 (22%), Positives = 98/206 (46%), Gaps = 8/206 (3%)
Query: 59 EQEKENFKKQRAVCKESQAKALDAMLNYMAYTKDEIKSMILEQLEEELEAQKSALIRRYE 118
+QEK K R +E++ + + AY E+K+ + E+ +EL+A + LIR++E
Sbjct: 38 QQEKSKVGKLRERLQEAKLEREQEQRRHTAYIS-ELKAKLHEEKTKELQALREGLIRQHE 96
Query: 119 KEAKEEGK-KKSYAILAEATARFAGNYAAENLTTRIALPCSDYIGRVIGKDGKNIEAFKK 177
+EA K K+ +AT + AA+ + T + + R DG+ + ++
Sbjct: 97 QEAARTAKIKEGELQRLQATLNVLRDGAADKVKTALLTEAREEARRAF--DGERLRLQQE 154
Query: 178 VSGVDIEFSEDSSELCLSSFNLYRREVASETLKILIEDGRIQPNRIEEVYHRVARNLEKE 237
+ ++++ + +E LS+ + A++ L+ + + + +RI+ R R L E
Sbjct: 155 I--LELKAARKQAEEALSNCMQADKTKAAD-LRAAYQAHQDEVHRIKRECERDIRRLMDE 211
Query: 238 LLSEGESVV-LELELGAMEDELKILI 262
+ + ++ LE ELG + + L+
Sbjct: 212 IKGKDRVILALEKELGVQAGQTQKLL 237
>gb|AAK19244.1|AF312916_1 (AF312916) reticulocyte binding protein 2 homolog A [Plasmodium
falciparum]
Length = 3130
Score = 46.2 bits (108), Expect = 8e-04
Identities = 33/103 (32%), Positives = 54/103 (52%), Gaps = 4/103 (3%)
Query: 30 EAQHKEFVRDEKRYLEKEKKELEKERQILEQEKENFKKQRAVCKESQAKALDAMLNYMAY 89
E + KE R EK EKE+ E EK+ Q+ ++E+ K+Q ++ + +AL
Sbjct: 2689 EEERKERERIEKEKQEKERLEREKQEQLKKEEELRKKEQERQEQQQKEEALKRQEQERLQ 2748
Query: 90 TKDEIKSMILEQLEEEL--EAQKSALIRRYEKE--AKEEGKKK 128
++E+K E+LE E + QK ++R E+E KEE K+
Sbjct: 2749 KEEELKRQEQERLEREKQEQLQKEEELKRQEQERLQKEEALKR 2791
Score = 43.1 bits (100), Expect = 0.007
Identities = 36/125 (28%), Positives = 60/125 (47%), Gaps = 17/125 (13%)
Query: 21 KKEAHLKHLEAQHKEFVRDEKRYLEKEKKELEKERQILEQEKENF--KKQRAVCKESQAK 78
KKE L+ E + +E + E+ +E++ L+KE ++ QE+E +KQ + KE + K
Sbjct: 2717 KKEEELRKKEQERQEQQQKEEALKRQEQERLQKEEELKRQEQERLEREKQEQLQKEEELK 2776
Query: 79 -----------ALDAMLNYMAYTKDEIKSMILEQLEEEL--EAQKSALIRRYEKE--AKE 123
AL ++E+K E+LE E + QK ++R E+E KE
Sbjct: 2777 RQEQERLQKEEALKRQEQERLQKEEELKRQEQERLEREKQEQLQKEEELKRQEQERLQKE 2836
Query: 124 EGKKK 128
E K+
Sbjct: 2837 EALKR 2841
Score = 43.1 bits (100), Expect = 0.007
Identities = 27/116 (23%), Positives = 62/116 (53%), Gaps = 3/116 (2%)
Query: 14 QLQTHFDKKEAHLKHLEAQHKEFVRDEKRYLEKEKKELEKERQILEQEKENFKKQRAVCK 73
+LQ + K + LE + +E ++ E+ +E++ L+KE + QE+E +K+ + +
Sbjct: 2746 RLQKEEELKRQEQERLEREKQEQLQKEEELKRQEQERLQKEEALKRQEQERLQKEEELKR 2805
Query: 74 ESQAKALDAMLNYMAYTKDEIKSMILEQL--EEELEAQKSALIRRYEKEAKEEGKK 127
+ Q + L+ ++E+K E+L EE L+ Q+ +++ E+ ++E ++
Sbjct: 2806 QEQER-LEREKQEQLQKEEELKRQEQERLQKEEALKRQEQERLQKEEELKRQEQER 2860
>ref|NP_247879.1| (NC_000909) activator 1 (replication factor C), 53 KD subunit
[Methanococcus jannaschii] [Methanocaldococcus
jannaschii]
pir||D64410 replication factor C large chain homolog - Methanococcus jannaschii
gb|AAB98888.1| (U67532) activator 1 (replication factor C), 53 KD subunit
[Methanococcus jannaschii] [Methanocaldococcus
jannaschii]
Length = 516
Score = 46.2 bits (108), Expect = 8e-04
Identities = 40/122 (32%), Positives = 67/122 (54%), Gaps = 13/122 (10%)
Query: 15 LQTHFDKKEAHLKHLEAQH--KEFVR--DEKRYLEKEKKELEKERQILEQEKENFKKQRA 70
L +F+ KE LK L E ++ EK+ LE++KK KE++ LE+EK+ K+++A
Sbjct: 385 LVDYFEIKEDELKVLVGDKLASEILKILKEKKKLERKKK---KEKEKLEKEKK--KEEKA 439
Query: 71 VCKES----QAKALDAMLNYMAYTKDEIKSMILEQLEEELEAQKSALIRRYEKEAKEEGK 126
K+S Q K + + K+E+K I+E+ + E +KS + K+ K++GK
Sbjct: 440 KEKQSNLIIQPKEIKEEVKAEVEKKEEVKEKIVEKPKAEEVKEKSKTEEKETKKDKKKGK 499
Query: 127 KK 128
KK
Sbjct: 500 KK 501
>gb|AAA72295.1| (L04159) [Plasmodium falciparum 3' end.], gene product [Plasmodium
falciparum 3D7]
Length = 503
Score = 46.2 bits (108), Expect = 8e-04
Identities = 33/103 (32%), Positives = 54/103 (52%), Gaps = 4/103 (3%)
Query: 30 EAQHKEFVRDEKRYLEKEKKELEKERQILEQEKENFKKQRAVCKESQAKALDAMLNYMAY 89
E + KE R EK EKE+ E EK+ Q+ ++E+ K+Q ++ + +AL
Sbjct: 62 EEERKERERIEKEKQEKERLEREKQEQLKKEEELRKKEQERQEQQQKEEALKRQEQERLQ 121
Query: 90 TKDEIKSMILEQLEEEL--EAQKSALIRRYEKE--AKEEGKKK 128
++E+K E+LE E + QK ++R E+E KEE K+
Sbjct: 122 KEEELKRQEQERLEREKQEQLQKEEELKRQEQERLQKEEALKR 164
Score = 43.1 bits (100), Expect = 0.007
Identities = 36/125 (28%), Positives = 60/125 (47%), Gaps = 17/125 (13%)
Query: 21 KKEAHLKHLEAQHKEFVRDEKRYLEKEKKELEKERQILEQEKENF--KKQRAVCKESQAK 78
KKE L+ E + +E + E+ +E++ L+KE ++ QE+E +KQ + KE + K
Sbjct: 90 KKEEELRKKEQERQEQQQKEEALKRQEQERLQKEEELKRQEQERLEREKQEQLQKEEELK 149
Query: 79 -----------ALDAMLNYMAYTKDEIKSMILEQLEEEL--EAQKSALIRRYEKE--AKE 123
AL ++E+K E+LE E + QK ++R E+E KE
Sbjct: 150 RQEQERLQKEEALKRQEQERLQKEEELKRQEQERLEREKQEQLQKEEELKRQEQERLQKE 209
Query: 124 EGKKK 128
E K+
Sbjct: 210 EALKR 214
Score = 43.1 bits (100), Expect = 0.007
Identities = 27/116 (23%), Positives = 62/116 (53%), Gaps = 3/116 (2%)
Query: 14 QLQTHFDKKEAHLKHLEAQHKEFVRDEKRYLEKEKKELEKERQILEQEKENFKKQRAVCK 73
+LQ + K + LE + +E ++ E+ +E++ L+KE + QE+E +K+ + +
Sbjct: 119 RLQKEEELKRQEQERLEREKQEQLQKEEELKRQEQERLQKEEALKRQEQERLQKEEELKR 178
Query: 74 ESQAKALDAMLNYMAYTKDEIKSMILEQL--EEELEAQKSALIRRYEKEAKEEGKK 127
+ Q + L+ ++E+K E+L EE L+ Q+ +++ E+ ++E ++
Sbjct: 179 QEQER-LEREKQEQLQKEEELKRQEQERLQKEEALKRQEQERLQKEEELKRQEQER 233
>ref|XP_087524.4| (XM_087524) similar to Hypothetical protein KIAA0555 [Homo sapiens]
Length = 670
Score = 46.2 bits (108), Expect = 8e-04
Identities = 47/206 (22%), Positives = 98/206 (46%), Gaps = 8/206 (3%)
Query: 59 EQEKENFKKQRAVCKESQAKALDAMLNYMAYTKDEIKSMILEQLEEELEAQKSALIRRYE 118
+QEK K R +E++ + + AY E+K+ + E+ +EL+A + LIR++E
Sbjct: 213 QQEKSKVGKLRERLQEAKLEREQEQRRHTAYIS-ELKAKLHEEKTKELQALREGLIRQHE 271
Query: 119 KEAKEEGK-KKSYAILAEATARFAGNYAAENLTTRIALPCSDYIGRVIGKDGKNIEAFKK 177
+EA K K+ +AT + AA+ + T + + R DG+ + ++
Sbjct: 272 QEAARTAKIKEGELQRLQATLNVLRDGAADKVKTALLTEAREEARRAF--DGERLRLQQE 329
Query: 178 VSGVDIEFSEDSSELCLSSFNLYRREVASETLKILIEDGRIQPNRIEEVYHRVARNLEKE 237
+ ++++ + +E LS+ + A++ L+ + + + +RI+ R R L E
Sbjct: 330 I--LELKAARKQAEEALSNCMQADKTKAAD-LRAAYQAHQDEVHRIKRECERDIRRLMDE 386
Query: 238 LLSEGESVV-LELELGAMEDELKILI 262
+ + ++ LE ELG + + L+
Sbjct: 387 IKGKDRVILALEKELGVQAGQTQKLL 412
>ref|NP_572129.1| (NC_003409) ORF 73; extensive acidic domains, potential leucine
zipper; immediate early protein homolog [Human
herpesvirus 8]
gb|AAC55944.1| (U52064) Herpesvirus saimiri ORF73 homolog [Human herpesvirus 8]
gb|AAC57158.1| (U75698) ORF 73; extensive acidic domains, potential leucine
zipper; immediate early protein homolog [Human
herpesvirus 8]
Length = 1162
Score = 45.8 bits (107), Expect = 0.001
Identities = 24/111 (21%), Positives = 63/111 (56%), Gaps = 1/111 (0%)
Query: 14 QLQTHFDKKEAHLKHLEAQHKEFVRDEKRYLEKEKKELEKERQILEQEKENFKKQRAVCK 73
+L+ + E + LE Q +E + ++++ LE++++ELE++ Q LE++++ ++Q +
Sbjct: 782 ELEEQEQELEEQEQELEEQEQE-LEEQEQELEEQEQELEEQEQELEEQEQELEEQEQELE 840
Query: 74 ESQAKALDAMLNYMAYTKDEIKSMILEQLEEELEAQKSALIRRYEKEAKEE 124
E + + + + ++E + +E+ E+E E Q+ + E++ ++E
Sbjct: 841 EQEVEEQEQEVEEQEQEQEEQELEEVEEQEQEQEEQEEQELEEVEEQEEQE 891
Score = 45.4 bits (106), Expect = 0.001
Identities = 26/109 (23%), Positives = 64/109 (57%), Gaps = 2/109 (1%)
Query: 16 QTHFDKKEAHLKHLEAQHKEFVRDEKRYLEKEKKELEKERQILEQEKENFKKQRAVCKES 75
Q +++E + LE Q +E + D+++ LE++++ELE++ Q LE++++ ++Q +E
Sbjct: 756 QEEQEQQEEQEQELEEQEQE-LEDQEQELEEQEQELEEQEQELEEQEQELEEQEQELEE- 813
Query: 76 QAKALDAMLNYMAYTKDEIKSMILEQLEEELEAQKSALIRRYEKEAKEE 124
Q + L+ + + E++ E E+E+E Q+ + + +++ ++E
Sbjct: 814 QEQELEEQEQELEEQEQELEEQEQELEEQEVEEQEQEVEEQEQEQEEQE 862
>gb|AAC27083.2| (AF077666) M protein [Streptococcus pyogenes]
Length = 238
Score = 45.8 bits (107), Expect = 0.001
Identities = 36/123 (29%), Positives = 62/123 (50%), Gaps = 9/123 (7%)
Query: 25 HLKHLEAQHKEFVRDEKRYLEKEKKELEKERQ----ILEQEKENFKKQRAVCKESQA--- 77
+LK L+ +HKE ++++ E++K + + ERQ + ++ +E +KQ+ + KE Q
Sbjct: 102 YLKKLDHEHKEHQKEQQEQEERQKNQEQLERQSQREVEKRYQEQLQKQQQLEKEKQISDA 161
Query: 78 --KALDAMLNYMAYTKDEIKSMILEQLEEELEAQKSALIRRYEKEAKEEGKKKSYAILAE 135
K+L L K E+++ + EE+ + S + EA E KKK A LA
Sbjct: 162 SRKSLSRDLEASRAAKKELEAEHQKLKEEKQISDASRKSLSRDLEASREAKKKVEADLAA 221
Query: 136 ATA 138
TA
Sbjct: 222 LTA 224
>gb|AAL86704.1|AF481861_1 (AF481861) Mnn4p [Candida albicans]
Length = 997
Score = 45.8 bits (107), Expect = 0.001
Identities = 34/118 (28%), Positives = 66/118 (55%), Gaps = 5/118 (4%)
Query: 21 KKEAHLKHLEAQHKEFVRDEKRYLEKEKKELEKERQILEQEKENFKKQRAVCKESQAKAL 80
K+E K E + K+ EK+ LE++KK+LE+E++ +E+EK ++Q+ ++ + KA
Sbjct: 261 KEEEEKKKAEEEEKQRHEQEKQALEEDKKKLEEEKKKIEEEKNKLQEQQQQ-QQQEEKAN 319
Query: 81 DAMLNYMAYTK--DEIKSMILEQLEEELEAQKSAL-IRRYEKEAKEEGKKKSYAILAE 135
D + + K DEIK M Q + + +A ++ + + + EA E+ + A +A+
Sbjct: 320 DGNQEHSKFVKRDDEIK-MSTSQDKSDSDADRAKIDMTTFFNEAFEKLSDEDKASVAK 376
>sp|Q9JI55|PLE1_CRIGR Plectin 1 (PLTN) (PCN) (300-kDa intermediate filament-associated
protein) (IFAP300)
gb|AAF70372.1| (AF260753) plectin [Cricetulus griseus]
Length = 4473
Score = 45.4 bits (106), Expect = 0.001
Identities = 93/430 (21%), Positives = 164/430 (37%), Gaps = 51/430 (11%)
Query: 23 EAHLKHLEAQHKEFVRDEKRYLEKEKKELEKERQILEQEKENFKKQRAVCKESQAKALDA 82
EA L + A+ + + + R E+ + EK +Q LE E + F++ +A A +A
Sbjct: 1680 EAELAKVRAEMEVLLASKARAEEESRSTSEKSKQRLEAEADRFRELAEEAARLRALAEEA 1739
Query: 83 MLNYMAYTKD------EIKSMILEQLEEELEAQK---SALIRRYEKEAKEEGKKKSYAIL 133
+D E + ++ E+L EA + A I EKEA+ E ++ L
Sbjct: 1740 KRQRQLAEEDAARQRAEAERVLTEKLAAISEATRLKTEAEIALKEKEAENERLRR----L 1795
Query: 134 AEATARFAGNYAAENLTTRIALPCSDYIGRVIGKDGKNIEAFKKVSGVDIEFSEDSSELC 193
AE A + L + AL +D R + +K S ++E + E
Sbjct: 1796 AEDEA-----FQRRRLEEQAALHKADIEER--------LAQLRKASESELERQKGLVEDT 1842
Query: 194 LSSFNLYRREVASE--TLKILIEDGRIQPNRIEEVYHRVARNLEKELLSEGES---VVLE 248
L RR+V E LK+ E +E R+ + E + S+ ++ +
Sbjct: 1843 LRQ----RRQVEEEILALKVSFEKAAAGKAELELELGRIRSSAEDTMRSKEQAEQEAARQ 1898
Query: 249 LELGAMEDELKILIGKMRYRSSFGQNALQHSKEVALLAGLIAEQLGGDKKLARRAGILHD 308
+L A E++ + + +S + ++ AL E+L + ARR
Sbjct: 1899 RQLAAEEEQRRREAEERVQKSLAAEEEAARQRKAALEE---VERLKAKVEEARR------ 1949
Query: 309 IGKALTQELGRDHVNLGVEVCKRHKEDPVVINAIYAHHGHEEILSVECASVCAADALSAG 368
+ + QE R + L E ++ + +A EE+ + L
Sbjct: 1950 LRERAEQESARQ-LQLAQEAAQKRLQAEEKAHAFVVQQREEELQQTLQQEQSMLERLRGE 2008
Query: 369 RPGARRKSDEEYAKRMQALEEIALEFDGVEKAYAMESGRELRVIVKSNQVRDNQVPIIAR 428
ARR ++E R QA E A VE+A ++ E + ++ Q A
Sbjct: 2009 AEAARRAAEEAEEAREQAEREAAQSRKQVEEAERLKQSAEEQAQARA------QAQAAAE 2062
Query: 429 KIAKKIEESA 438
K+ K+ E+ A
Sbjct: 2063 KLRKEAEQEA 2072
Score = 45.4 bits (106), Expect = 0.001
Identities = 95/438 (21%), Positives = 175/438 (39%), Gaps = 53/438 (12%)
Query: 21 KKEAHLKHLEAQHKEFVRDEKRYLEKEKKELEKERQILEQEKENFKKQRAVCKESQAKAL 80
+K+ L AQ + E L E ++ E++RQ+LE+E +++ A + + L
Sbjct: 1621 EKQRQLAEGTAQQRLAAEQELIRLRAETEQGEQQRQLLEEELARLQRE-ATAATHKRQEL 1679
Query: 81 DAMLNYMAYTKDEIKSMILEQLEEELEAQKSALIRRYEKEAKEEGKKKSYAILAEATARF 140
+A L A + E++ ++ + E E++ ++ + EA+ + + LAE AR
Sbjct: 1680 EAEL---AKVRAEMEVLLASKARAEEESRSTSEKSKQRLEAEAD----RFRELAEEAARL 1732
Query: 141 AGNYAAENLTTRIALPCSDYIGRVIGKDGKNIEAFKKVSGVDIEFSEDSSELCLSSFNLY 200
AE + L D + EA + ++ SE + + L
Sbjct: 1733 RA--LAEEAKRQRQLAEED-------AARQRAEAERVLTEKLAAISEATRLKTEAEIALK 1783
Query: 201 RREVASETLKILIEDGRIQPNRIEEVYHRVARNLEKEL--LSEGESVVLELELGAMEDEL 258
+E +E L+ L ED Q R+EE ++E+ L L + LE + G +ED L
Sbjct: 1784 EKEAENERLRRLAEDEAFQRRRLEEQAALHKADIEERLAQLRKASESELERQKGLVEDTL 1843
Query: 259 KILIGKMRYRSSFGQNALQHSKEVALLAGLIAEQLGGDKKLARRAGILHDIG-------K 311
+ Q +E+ L + G +L G + +
Sbjct: 1844 R--------------QRRQVEEEILALKVSFEKAAAGKAELELELGRIRSSAEDTMRSKE 1889
Query: 312 ALTQELGRDHVNLGVEVCKRHKEDPVVINAIYAHHGHEEILSVECASVCAADALSAGRPG 371
QE R E +R + + V ++ A EE A++ + L A
Sbjct: 1890 QAEQEAARQRQLAAEEEQRRREAEERVQKSLAA---EEEAARQRKAALEEVERLKAKVEE 1946
Query: 372 ARR---KSDEEYAKRMQALEEIALE-FDGVEKAYA---MESGRELRVIVKSNQ---VRDN 421
ARR ++++E A+++Q +E A + EKA+A + EL+ ++ Q R
Sbjct: 1947 ARRLRERAEQESARQLQLAQEAAQKRLQAEEKAHAFVVQQREEELQQTLQQEQSMLERLR 2006
Query: 422 QVPIIARKIAKKIEESAQ 439
AR+ A++ EE+ +
Sbjct: 2007 GEAEAARRAAEEAEEARE 2024
>ref|NP_051373.1| (NC_000952) ErpM [Borrelia burgdorferi]
gb|AAC45967.1| (U72998) ErpM [Borrelia burgdorferi]
gb|AAF07581.1|AE001579_10 (AE001579) ErpM [Borrelia burgdorferi]
Length = 363
Score = 45.4 bits (106), Expect = 0.001
Identities = 46/200 (23%), Positives = 92/200 (46%), Gaps = 30/200 (15%)
Query: 20 DKKEAHLKHLEAQHKEFVRDEKRYLEKEKKELEKERQILEQEKENFKKQRAVCKESQAKA 79
D+K K + KE V ++K + +K+++EK+ Q ++E+ N K+++ +E++A+A
Sbjct: 115 DQKAKESKDKVEEEKEVVEEKKEEQDSKKEKVEKQSQKQKEEERNSKEEQQKQEEAKARA 174
Query: 80 LDAMLNYMAYTKDEIKSMILEQLEEELEAQKSALIRRYEKEAKEEGKKKSYAILAEATAR 139
D + L+Q E++ + +++ + EK+ +EE +K+ +
Sbjct: 175 ------------DREREERLKQQEQKRQQEEARVKAEKEKQEREEQQKQEEEKKVK---- 218
Query: 140 FAGNYAAENLTTRIALPCSDYIGRVI-GKDGKNI----EAFKKVSGVDIEFSEDSSELCL 194
Y + LT +I D I + I G +GK I E K++G + D ++
Sbjct: 219 ----YKIKTLTDKI-----DEINKDIDGINGKTIVGAEEVIDKITGPVYDDFTDGNKAIY 269
Query: 195 SSFNLYRREVASETLKILIE 214
++ E E K+L E
Sbjct: 270 KTWGDLEDEEGEELGKLLKE 289
>gb|AAL92974.1| (AC116028) putative protein potential transcriptional repressor
Not4hp - Mus musculus [Dictyostelium discoideum]
Length = 1348
Score = 45.4 bits (106), Expect = 0.001
Identities = 37/128 (28%), Positives = 69/128 (53%), Gaps = 8/128 (6%)
Query: 2 QIATAIWKTRIWQLQTHFDKKEAHLKHLEAQHKEFVRDEKRYLEKEKKELEKERQILEQE 61
+ A+ + + ++ + Q DK+ + E+ E R E LEKEK +L+ E++ LE+E
Sbjct: 420 ETASILRQKQLEEEQFKKDKERLEKEKQESYRLEKERLENERLEKEKHQLQMEKERLERE 479
Query: 62 KENFKKQRAVCKESQAKALDAMLNYMAYTKDEIKSMILEQLEEE-LEAQKSALIRRYEKE 120
KE +K+ K + K L+ + E + ++LE+E +E +K I++ EK+
Sbjct: 480 KERLEKE----KMEKEKRLERERQERDRLEKERQER--DRLEKERIEREKQEKIKQ-EKQ 532
Query: 121 AKEEGKKK 128
AK++ KK+
Sbjct: 533 AKQQAKKQ 540
>ref|NP_326110.1| (NC_002771) conserved hypothetical protein [Mycoplasma pulmonis]
emb|CAC13452.1| (AL445563) conserved hypothetical protein [Mycoplasma pulmonis]
Length = 1099
Score = 45.1 bits (105), Expect = 0.002
Identities = 37/117 (31%), Positives = 57/117 (48%), Gaps = 24/117 (20%)
Query: 22 KEAHLKHLEAQH--------KEFVRDEKRYLEKEKKEL----EKERQILEQEKENFKKQR 69
KE+ LK ++ Q +E +EK E +K+EL E+ + +LEQEK+N++ ++
Sbjct: 844 KESQLKEMKKQEILSREKRLREIKENEKLIFEAKKEELRRAEERVKSLLEQEKQNYETKK 903
Query: 70 AVCKESQAKALDAMLNYMAYTKDEIKSMILEQLEEELEAQKSAL---IRRYEKEAKE 123
KE + K + DEIK EQ +ELE K L +R E+E E
Sbjct: 904 ETIKEQEYKVRQLI-------SDEIKE--YEQRTKELEFAKVELENKLRAQERETSE 951
>ref|NP_609398.1| (NM_135554) Klp31E gene product [Drosophila melanogaster]
gb|AAF63388.1|AF247500_1 (AF247500) kinesin-like protein [Drosophila melanogaster]
Length = 1048
Score = 45.1 bits (105), Expect = 0.002
Identities = 69/312 (22%), Positives = 125/312 (39%), Gaps = 50/312 (16%)
Query: 12 IWQLQTHFDKKEAHLKHLEAQHKEFVRDEKRYLE-----KEKKELEKERQILEQ------ 60
I +LQT + E H K +E + R+ K + K KK+LE+ER++L
Sbjct: 478 IEELQTKLIESEEHRKQMEIKATTSPRNAKPVYDGDIITKAKKDLERERELLMSRSLPGI 537
Query: 61 EKENFKKQRAVCKESQAKALDAMLNYMAYTKD-EIKSMILEQLEEELEAQKSALIRRYEK 119
+ +N + S ++A + + + A D E+++ ++EQLE RYE+
Sbjct: 538 QNQNVSSEETEVASSDSEAEEVVKDLEAIDNDIEMRTKLIEQLE--------LTNSRYEQ 589
Query: 120 EAKEEGKKKSYAILAEATARFAGNYAAENLTTRIALPCSDYIGRVIGKDGKNIEAFKKVS 179
+K S + + N+TT ++ P D + +V + K+S
Sbjct: 590 MRTHYEEKLSVLYCKIENTQKERDDVLANMTTSVSTPSKDSLKKV------KTDYESKIS 643
Query: 180 GVDIE---FSEDSSELCLSSFNLYRREVASETLKILIEDGRI-----------QPNRIEE 225
+ E E S L EV TL+ + + + Q NR ++
Sbjct: 644 HMQTEIRKLQNAQREHIRSKQQLKSHEVRIGTLRNELNELKFAKVKLMKKMSQQSNRHKQ 703
Query: 226 VYHR----VARNLEKELLSEGESVVLELELGAMEDELK-----ILIGKMRYRSSFGQNAL 276
R +A+ L+++ + + LE ++ A E LK ++ + R GQ A
Sbjct: 704 EESRKSKEIAQLLKEQRRQKNAVLTLEAKVSAKEQILKRKTEEVIALRKSQRGKSGQRAP 763
Query: 277 QH-SKEVALLAG 287
H + ++A L G
Sbjct: 764 AHLTSKIATLDG 775
>ref|NP_245905.1| (NC_002663) TolA [Pasteurella multocida]
gb|AAK03052.1| (AE006136) TolA [Pasteurella multocida]
Length = 389
Score = 45.1 bits (105), Expect = 0.002
Identities = 37/120 (30%), Positives = 69/120 (56%), Gaps = 10/120 (8%)
Query: 27 KHLEAQHKEFVRDEKRYLEKEKKELEKERQILEQEKENFKKQRAVCKESQAKALDAMLNY 86
K ++ +E +R ++ +EK+K LEK+++I +Q++ +KQ A K+ + +A A L
Sbjct: 87 KPVQPDEQEIIRQQE--IEKQKA-LEKQKEIEQQKEIERQKQLAEQKKQEEQARLAALEK 143
Query: 87 MAYTKDEIKSMILE--QLEEELEAQK-SALIRRYEKEAK----EEGKKKSYAILAEATAR 139
++ + E +L+ E EA++ +AL ++ E+EAK EE K+K+ AEA A+
Sbjct: 144 QKQAEEAKAKQLAEAAKLKAEAEAKRLAALAKQAEEEAKAKAAEEAKRKAEKAKAEAEAK 203
>pir||T32297 hypothetical protein M151.4 - Caenorhabditis elegans
Length = 1034
Score = 45.1 bits (105), Expect = 0.002
Identities = 55/257 (21%), Positives = 113/257 (43%), Gaps = 8/257 (3%)
Query: 12 IWQLQTHFDKKEAHLKHLEAQHKEFVRDEKRYLEKEKKELEKERQILEQEKENFKKQRAV 71
+ +LQT DK E + K+ ++D + LEK K+++ + +E+ K++ +
Sbjct: 645 VQKLQTDKDKLEEEYMNDMRDLKKALKDNQEGLEKIAKDVKNKEGEIEELKKSVSSEIVK 704
Query: 72 CKESQAKALDAMLNYMAYTKDEIKSMILEQLEEELEAQKSALIRRYEKEAKEEGKKKSYA 131
E+ A A D + + +DE + + ++ ++E+E K AL EK E K +
Sbjct: 705 ATEA-AHATDQLRKKLQKQQDEHEKRVEQEHKKEIEDLKGALAA--EKRISEADKVELKK 761
Query: 132 ILAEATARFAGNYAAENLTTRIALPCSDYIGRVIGKDGKNIEAFKKVSGVDIEF--SEDS 189
+ E + N +N T + + K +A K++ G E E++
Sbjct: 762 LTEELQSMHLKNKELKNNVTTENSRATGAVQEAQVLQEKLQQALKELEGKKKELLEQENA 821
Query: 190 SELCLSSFNLYRREVASETLKILIEDGRIQPNRIEEVYHRVARNLEKELLSEGESVVLEL 249
+L + F ++ + +K L + + + I+E H+VA E+ + E LE
Sbjct: 822 HKLRMDQFEDDTKKRHKKEIKALEVEVKKRNATIKE--HQVAAQ-ERRAKHDAEVEELEQ 878
Query: 250 ELGAMEDELKILIGKMR 266
+L E++ + ++ +R
Sbjct: 879 KLATEEEKCRRIVQDIR 895
Score = 43.5 bits (101), Expect = 0.005
Identities = 60/260 (23%), Positives = 114/260 (43%), Gaps = 26/260 (10%)
Query: 21 KKEAHLKHLEAQHKEFVRDEKRYLEKEKKELEKERQILEQEKENFK--KQRAVCKESQAK 78
K + H + L+ +HKE V L EK++LEK + ++ + + K++ + S+A
Sbjct: 580 KLQVHQQKLKQEHKEAVETLVEALRAEKEKLEKILEDARKKDDEIEELKKKVNSESSRAT 639
Query: 79 ALDAMLNYMAYTKDEIKSMILEQLEEELEAQKSAL--IRRYEKEAK------EEGKKKSY 130
D + + KD+++ + + + +A K + + K+ K EE KK
Sbjct: 640 LADEAVQKLQTDKDKLEEEYMNDMRDLKKALKDNQEGLEKIAKDVKNKEGEIEELKKSVS 699
Query: 131 AILAEATARFAGNYAAENLTTRIALPCSDYIGRVIGKDGKNIEAFKKVSGVDIEFSE-DS 189
+ + +AT +A + L ++ ++ RV + K IE K + SE D
Sbjct: 700 SEIVKAT---EAAHATDQLRKKLQKQQDEHEKRVEQEHKKEIEDLKGALAAEKRISEADK 756
Query: 190 SELC-----LSSFNLYRREVASE-TLKILIEDGRIQPNRI-EEVYHRVARNLE---KELL 239
EL L S +L +E+ + T + G +Q ++ +E + + LE KELL
Sbjct: 757 VELKKLTEELQSMHLKNKELKNNVTTENSRATGAVQEAQVLQEKLQQALKELEGKKKELL 816
Query: 240 SEGESVVLELELGAMEDELK 259
+ + +L + ED+ K
Sbjct: 817 EQENA--HKLRMDQFEDDTK 834
>ref|NP_494598.1| (NM_062197) M151.4.p [Caenorhabditis elegans]
gb|AAK77623.1|AF024502_4 (AF024502) Hypothetical protein M151.4 [Caenorhabditis elegans]
Length = 591
Score = 45.1 bits (105), Expect = 0.002
Identities = 55/257 (21%), Positives = 113/257 (43%), Gaps = 8/257 (3%)
Query: 12 IWQLQTHFDKKEAHLKHLEAQHKEFVRDEKRYLEKEKKELEKERQILEQEKENFKKQRAV 71
+ +LQT DK E + K+ ++D + LEK K+++ + +E+ K++ +
Sbjct: 202 VQKLQTDKDKLEEEYMNDMRDLKKALKDNQEGLEKIAKDVKNKEGEIEELKKSVSSEIVK 261
Query: 72 CKESQAKALDAMLNYMAYTKDEIKSMILEQLEEELEAQKSALIRRYEKEAKEEGKKKSYA 131
E+ A A D + + +DE + + ++ ++E+E K AL EK E K +
Sbjct: 262 ATEA-AHATDQLRKKLQKQQDEHEKRVEQEHKKEIEDLKGALAA--EKRISEADKVELKK 318
Query: 132 ILAEATARFAGNYAAENLTTRIALPCSDYIGRVIGKDGKNIEAFKKVSGVDIEF--SEDS 189
+ E + N +N T + + K +A K++ G E E++
Sbjct: 319 LTEELQSMHLKNKELKNNVTTENSRATGAVQEAQVLQEKLQQALKELEGKKKELLEQENA 378
Query: 190 SELCLSSFNLYRREVASETLKILIEDGRIQPNRIEEVYHRVARNLEKELLSEGESVVLEL 249
+L + F ++ + +K L + + + I+E H+VA E+ + E LE
Sbjct: 379 HKLRMDQFEDDTKKRHKKEIKALEVEVKKRNATIKE--HQVAAQ-ERRAKHDAEVEELEQ 435
Query: 250 ELGAMEDELKILIGKMR 266
+L E++ + ++ +R
Sbjct: 436 KLATEEEKCRRIVQDIR 452
Score = 43.5 bits (101), Expect = 0.005
Identities = 60/260 (23%), Positives = 114/260 (43%), Gaps = 26/260 (10%)
Query: 21 KKEAHLKHLEAQHKEFVRDEKRYLEKEKKELEKERQILEQEKENFK--KQRAVCKESQAK 78
K + H + L+ +HKE V L EK++LEK + ++ + + K++ + S+A
Sbjct: 137 KLQVHQQKLKQEHKEAVETLVEALRAEKEKLEKILEDARKKDDEIEELKKKVNSESSRAT 196
Query: 79 ALDAMLNYMAYTKDEIKSMILEQLEEELEAQKSAL--IRRYEKEAK------EEGKKKSY 130
D + + KD+++ + + + +A K + + K+ K EE KK
Sbjct: 197 LADEAVQKLQTDKDKLEEEYMNDMRDLKKALKDNQEGLEKIAKDVKNKEGEIEELKKSVS 256
Query: 131 AILAEATARFAGNYAAENLTTRIALPCSDYIGRVIGKDGKNIEAFKKVSGVDIEFSE-DS 189
+ + +AT +A + L ++ ++ RV + K IE K + SE D
Sbjct: 257 SEIVKAT---EAAHATDQLRKKLQKQQDEHEKRVEQEHKKEIEDLKGALAAEKRISEADK 313
Query: 190 SELC-----LSSFNLYRREVASE-TLKILIEDGRIQPNRI-EEVYHRVARNLE---KELL 239
EL L S +L +E+ + T + G +Q ++ +E + + LE KELL
Sbjct: 314 VELKKLTEELQSMHLKNKELKNNVTTENSRATGAVQEAQVLQEKLQQALKELEGKKKELL 373
Query: 240 SEGESVVLELELGAMEDELK 259
+ + +L + ED+ K
Sbjct: 374 EQENA--HKLRMDQFEDDTK 391
>gb|AAL10509.1| (AY042084) maebl [Plasmodium falciparum]
Length = 2055
Score = 44.7 bits (104), Expect = 0.002
Identities = 38/132 (28%), Positives = 74/132 (55%), Gaps = 10/132 (7%)
Query: 2 QIATAIWKTRIWQ-LQTHFDKKEAHLKHLEAQHKEFVRDEKRYLEKEKKELEKERQILEQ 60
+I I K RI + ++ + ++K+ + L+ + +E ++ E+ L+KE++E +K Q+ ++
Sbjct: 1563 EILKQIEKKRIEEVMKLYEEEKKMKAEQLKKEEEEKIKAEQ--LKKEEEEKKKVEQLKKK 1620
Query: 61 EKENFKKQRAVCKESQAKALDAMLNYMAYTKDEIKSMILEQL--EEELEAQKSALIRRYE 118
E+E KK + KE + + A K+E + E+L EEE E +K+ +++ E
Sbjct: 1621 EEEEKKKAEQLKKEEEENKIKA---EQLKKKEEEEKKKAEELKKEEEEEKKKAEQLKKEE 1677
Query: 119 KEAK--EEGKKK 128
+E K E+ KKK
Sbjct: 1678 EEKKKVEQLKKK 1689
Score = 43.5 bits (101), Expect = 0.005
Identities = 31/117 (26%), Positives = 62/117 (52%), Gaps = 4/117 (3%)
Query: 21 KKEAHLKHLEAQHKEFVRDEKRYLEKEKKELEKER--QILEQEKENFKKQRAVCKESQAK 78
K+E K E KE ++K+ + +K+E EK++ Q+ ++E+E KK + KE +
Sbjct: 1648 KEEEEKKKAEELKKEEEEEKKKAEQLKKEEEEKKKVEQLKKKEEEEKKKAEQLKKEEEEN 1707
Query: 79 ALDAMLNYMAYTKDEIKSMILEQLEEELEAQKSALIRRYEKEAKEEGKKKSYAILAE 135
+ + + ++E K E +EE E +K +++ E++ EE +K+ A++ E
Sbjct: 1708 KI--KVEQLKKEEEEEKKKAEELKKEEEEKKKVQQLKKEEEKKAEEIRKEKEAVIEE 1762
>ref|NP_594568.1| (NC_003424) hypothetical coiled-coil protein; troponin domain
[Schizosaccharomyces pombe]
sp|Q09863|YAFA_SCHPO Hypothetical protein C29E6.10c in chromosome I
pir||T38511 hypothetical coiled-coil protein - fission yeast
(Schizosaccharomyces pombe)
pir||S62516 hypothetical coiled-coil protein [imported] - fission yeast
(Schizosaccharomyces pombe)
emb|CAA91432.1| (Z66525) hypothetical coiled-coil protein [Schizosaccharomyces
pombe]
emb|CAB66473.1| (AL136538) hypothetical coiled-coil protein; troponin domain
[Schizosaccharomyces pombe]
Length = 1085
Score = 44.7 bits (104), Expect = 0.002
Identities = 35/130 (26%), Positives = 65/130 (49%), Gaps = 4/130 (3%)
Query: 22 KEAHLKHLEAQHKEFVR----DEKRYLEKEKKELEKERQILEQEKENFKKQRAVCKESQA 77
++A K LEA+ +E R +++ E+EKK+ E ERQ E++++ ++++ + K+ Q
Sbjct: 622 EQAAQKALEAKRQEEARKKREEQRLKREQEKKQQELERQKREEKQKQKEREKKLKKQQQE 681
Query: 78 KALDAMLNYMAYTKDEIKSMILEQLEEELEAQKSALIRRYEKEAKEEGKKKSYAILAEAT 137
+ M ++E K ++ E+ E ++ RR E KE +K+ A+
Sbjct: 682 ADREKMAREQRLREEEEKRILEERKRREKLDKEEEERRRRELLEKESEEKERRLREAKIA 741
Query: 138 ARFAGNYAAE 147
A FA N E
Sbjct: 742 AFFAPNQTKE 751
>pir||PH0139 M protein-like molecule class II - Streptococcus sp. (group A)
(fragment)
emb|CAA39808.1| (X56398) M2 protein [Streptococcus pyogenes]
Length = 168
Score = 44.7 bits (104), Expect = 0.002
Identities = 37/133 (27%), Positives = 68/133 (50%), Gaps = 11/133 (8%)
Query: 15 LQTHFDKKEAHLKHLEAQHKEFVRDEKRYLEKEKKELEKE-------RQILEQEKENFKK 67
L+ + A K LEA+H++ +++EK+ E +K L ++ ++ LE E + K+
Sbjct: 30 LRRDLEASRAAKKDLEAEHQK-LKEEKQISEASRKSLRRDLEASRAAKKDLEAEHQKLKE 88
Query: 68 QRAVCKES-QAKALDAMLNYMAYTKDEIKSMILEQLEEELEAQKSALIRRYEKEAKEEGK 126
++ + + S Q + D + A E + L++ ++ EA + L R + EA E K
Sbjct: 89 EKQISEASRQGLSRDLEASRAAKKDLEAEHQKLKEEKQISEASRQGLSR--DLEASREAK 146
Query: 127 KKSYAILAEATAR 139
KK A LAEA ++
Sbjct: 147 KKVEADLAEANSK 159
>ref|NP_062079.1| (NM_019206) serine/threonine kinase 10 [Rattus norvegicus]
gb|AAC52648.1| (U33472) AT1-46 [Rattus norvegicus]
Length = 472
Score = 44.3 bits (103), Expect = 0.003
Identities = 26/105 (24%), Positives = 57/105 (53%), Gaps = 6/105 (5%)
Query: 21 KKEAHLKHLEAQHKEFVRDEKRYLEKEKKEL--EKERQILEQEKENFKKQRAVCKESQAK 78
K E H + + ++FV +K LE K+L E R+I ++E++ K++ + ++ +A
Sbjct: 188 KMEEHAQKKQLLDRDFVAKQKEDLELAMKKLTAENRREICDKERDCLNKKQELLRDREA- 246
Query: 79 ALDAMLNYMAYTKDEIKSMILEQLEEELEAQKSALIRRYEKEAKE 123
A+ + E ++ +QL+++ Q+ L+R++EKE ++
Sbjct: 247 ---ALWEMEEHQLQERHQLVKQQLKDQYFLQRHDLLRKHEKEREQ 288
>gb|AAB62657.1| (U93872) ORF 73, contains large complex repeat CR 73 [Human
herpesvirus 8]
Length = 1089
Score = 44.3 bits (103), Expect = 0.003
Identities = 27/115 (23%), Positives = 66/115 (56%), Gaps = 2/115 (1%)
Query: 14 QLQTHFDKKEAHLKHLEAQHKEFVRDEKRYLEKEKKELEKERQILEQEKENFKKQRAVCK 73
+L+ + E + LE Q +E + ++++ LE++++ELE++ Q LE++++ ++Q +
Sbjct: 706 ELEEQEQELEEQEQELEEQEQE-LEEQEQELEEQEQELEEQEQELEEQEQELEEQEQELE 764
Query: 74 ESQAKALDAMLNYMAYTKDEIKSMILEQLEEELEAQKSALIRRYEKEAKEEGKKK 128
E Q + L+ + + E + +E+ E+E E Q+ + E+E +E+ +++
Sbjct: 765 E-QEQELEEQEQELEEQEQEQELEEVEEQEQEQEEQELEEVEEQEQEQEEQEEQE 818
Score = 43.5 bits (101), Expect = 0.005
Identities = 29/113 (25%), Positives = 63/113 (55%), Gaps = 4/113 (3%)
Query: 14 QLQTHFDKKEAHLKHLEAQHKEFVRDEKRYLEKEKKELEKERQILEQEKENFKKQRAVCK 73
Q Q +++ + E Q +E ++++ LE++++ELE++ Q LE++++ ++Q +
Sbjct: 621 QEQQEEQEQQEEQEQQEEQEQEQQEEQEQELEEQEQELEEQEQELEEQEQELEEQEQELE 680
Query: 74 ESQAKALDAMLNYMAYTKDEI--KSMILEQLEEELEAQKSALIRRYEKEAKEE 124
E Q + L+ + + E+ + LE+ E+ELE Q+ L E+E +E+
Sbjct: 681 E-QEQELEEQEQELEEQEQELEEQEQELEEQEQELEEQEQEL-EEQEQELEEQ 731
>pir||S43554 plasminogen-binding protein MLG72 - Streptococcus sp. (fragment)
emb|CAA83589.1| (Z32678) MLG72 [Streptococcus sp. 'group G']
Length = 472
Score = 44.3 bits (103), Expect = 0.003
Identities = 59/262 (22%), Positives = 112/262 (42%), Gaps = 32/262 (12%)
Query: 26 LKHLEAQHKEFVRDEKRYLEKEKKELEKERQILEQEKENFKKQRAVCKESQAKALDAMLN 85
LKH Q K+ +++ LE EK +LE+E+QI + +++ ++ +E++ K L+A
Sbjct: 158 LKHELEQEKQKAEADRQTLEAEKAKLEEEKQISDASRQSLRRDLDASREAK-KQLEAEYQ 216
Query: 86 YMAYTKDEIKSMILEQLEEELEAQKSA---LIRRYEK--------EAKEEGKKKSYAILA 134
+ K +I + L +L+A + A L Y+K EA +G ++
Sbjct: 217 KLEEEK-QISDASRQSLRRDLDASREAKKQLEAEYQKLEEQNKISEASRKGLRRDLDASR 275
Query: 135 EATARFAGNY----------AAENLTTRIALPCSDYIGRVIGKDGKNIEAFKKVSGVDIE 184
EA + + A R L S + + KD N+ A +++
Sbjct: 276 EAKKQLEAEHQKLEEQNKISEASRKGLRRDLDASREAKKQVEKDLANLTA-------ELD 328
Query: 185 FSEDSSELCLSSFNLYRREV-ASETLKILIEDGRIQPNRIEEVYHRVARNLEK-ELLSEG 242
++ ++ +S RR++ AS K +E + N ++ + LE+ + L+E
Sbjct: 329 KVKEEKQISDTSRKGLRRDLDASREAKKQVEKALEEANSKLAALEKLNKELEESKKLTEK 388
Query: 243 ESVVLELELGAMEDELKILIGK 264
E L+ +L A LK + K
Sbjct: 389 EKAELQAKLEAEAKALKEKLAK 410
>pir||S37046 IgA receptor - Streptococcus pyogenes
emb|CAA80436.1| (Z22751) IgA receptor protein [Streptococcus pyogenes]
prf||1924346A IgA receptor protein [Streptococcus pyogenes]
Length = 402
Score = 44.3 bits (103), Expect = 0.003
Identities = 42/126 (33%), Positives = 65/126 (51%), Gaps = 16/126 (12%)
Query: 21 KKEAHLKHLEAQHKEFVRDEKRYLEKEKKELEKERQILEQEKENFKKQRAVCKES-QAKA 79
+++ + LE QH++ KRY E++KK ++E+Q LE EK+ K++ + S Q +
Sbjct: 131 ERQERQEKLERQHQD-----KRYQEQQKKH-QQEQQQLEAEKQKLAKEKQISDASRQGLS 184
Query: 80 LDAMLNYMAYTKDEIKSMILE----QLEEE---LEAQKSALIRRYEKEAKEEGKKKSYAI 132
D + A + E K LE +L+EE +A + L R + EA E KKK A
Sbjct: 185 RDLEASRAAKKELEAKHQKLETEHQKLKEEKQISDASRQGLSR--DLEASREAKKKVEAD 242
Query: 133 LAEATA 138
LA TA
Sbjct: 243 LAALTA 248
>gb|AAK50002.1| (AF360120) ORF73 [Human herpesvirus 8]
Length = 1003
Score = 44.3 bits (103), Expect = 0.003
Identities = 27/115 (23%), Positives = 66/115 (56%), Gaps = 2/115 (1%)
Query: 14 QLQTHFDKKEAHLKHLEAQHKEFVRDEKRYLEKEKKELEKERQILEQEKENFKKQRAVCK 73
+L+ + E + LE Q +E + ++++ LE++++ELE++ Q LE++++ ++Q +
Sbjct: 620 ELEEQEQELEEQEQELEEQEQE-LEEQEQELEEQEQELEEQEQELEEQEQELEEQEQELE 678
Query: 74 ESQAKALDAMLNYMAYTKDEIKSMILEQLEEELEAQKSALIRRYEKEAKEEGKKK 128
E Q + L+ + + E + +E+ E+E E Q+ + E+E +E+ +++
Sbjct: 679 E-QEQELEEQEQELEEQEQEQELEEVEEQEQEQEEQELEEVEEQEQEQEEQEEQE 732
Score = 43.1 bits (100), Expect = 0.007
Identities = 28/111 (25%), Positives = 63/111 (56%), Gaps = 4/111 (3%)
Query: 16 QTHFDKKEAHLKHLEAQHKEFVRDEKRYLEKEKKELEKERQILEQEKENFKKQRAVCKES 75
Q D++E + + + +E ++++ LE++++ELE++ Q LE++++ ++Q +E
Sbjct: 530 QQQQDEQEQQEEQEQQEEQEQQEEQEQELEEQEQELEEQEQELEEQEQELEEQEQELEE- 588
Query: 76 QAKALDAMLNYMAYTKDEI--KSMILEQLEEELEAQKSALIRRYEKEAKEE 124
Q + L+ + + E+ + LE+ E+ELE Q+ L E+E +E+
Sbjct: 589 QEQELEEQEQELEEQEQELEEQEQELEEQEQELEEQEQEL-EEQEQELEEQ 638
>gb|AAD46501.1|AF148805_6 (AF148805) latent nuclear antigen [Human herpesvirus 8]
Length = 1129
Score = 44.3 bits (103), Expect = 0.003
Identities = 27/115 (23%), Positives = 66/115 (56%), Gaps = 2/115 (1%)
Query: 14 QLQTHFDKKEAHLKHLEAQHKEFVRDEKRYLEKEKKELEKERQILEQEKENFKKQRAVCK 73
+L+ + E + LE Q +E + ++++ LE++++ELE++ Q LE++++ ++Q +
Sbjct: 746 ELEEQEQELEEQEQELEEQEQE-LEEQEQELEEQEQELEEQEQELEEQEQELEEQEQELE 804
Query: 74 ESQAKALDAMLNYMAYTKDEIKSMILEQLEEELEAQKSALIRRYEKEAKEEGKKK 128
E Q + L+ + + E + +E+ E+E E Q+ + E+E +E+ +++
Sbjct: 805 E-QEQELEEQEQELEEQEQEQELEEVEEQEQEQEEQELEEVEEQEQEQEEQEEQE 858
>ref|NP_613509.1| (NC_003551) TOPRIM-domain-containing protein, potential nuclease
[Methanopyrus kandleri AV19]
gb|AAM01439.1| (AE010320) TOPRIM-domain-containing protein, potential nuclease
[Methanopyrus kandleri AV19]
Length = 291
Score = 43.9 bits (102), Expect = 0.004
Identities = 30/108 (27%), Positives = 55/108 (50%), Gaps = 9/108 (8%)
Query: 9 KTRIWQLQTHFDKKEAHLKHLEAQHKEF--VRDEKRYLEKEKKELEKERQILEQEKENFK 66
+ I +LQ ++KE ++ LE + E +R+ + +EKEK LE+ER L E E +
Sbjct: 135 REEIKELQEEIEEKEELIEELEEKESELEELRERLKEIEKEKALLEEERDRLLDEVERLR 194
Query: 67 KQRAVCKESQAKA-------LDAMLNYMAYTKDEIKSMILEQLEEELE 107
+ +E A L+++ + ++++ +LE+L EELE
Sbjct: 195 DRLEELEEELESADHLRIMDLESVCEEAELSPEDVEPEVLEELGEELE 242
>sp|P16947|M49_STRPY M protein, serotype 49 precursor
pir||A43715 M49 protein precursor - Streptococcus pyogenes
gb|AAA26868.1| (M31789) type 49 M protein precursor [Streptococcus pyogenes]
gb|AAA26918.1| (M23689) M protein precursor [Streptococcus pyogenes]
Length = 389
Score = 43.9 bits (102), Expect = 0.004
Identities = 62/254 (24%), Positives = 106/254 (41%), Gaps = 31/254 (12%)
Query: 20 DKKEAHLKHLEAQHKEFVRDEKRYLEKEKKELEKERQILEQEKENFKKQRAVCKESQAKA 79
++++ +L+ LE H+ V +K Y E+ KK E +++ E++K + +R +E + +
Sbjct: 89 EERQKNLEKLE--HQSQVAADKHYQEQAKKHQEYKQEQEERQKNQEQLERKYQREVEKR- 145
Query: 80 LDAMLNYMAYTKDEIKSMILEQLEEELEAQKSALIRRYEKEAKEEGKKKSYAILAEATAR 139
Y + K LE ++ EA + +L R + EA E KKK A LA T
Sbjct: 146 ---------YQEQLQKQQQLETEKQISEASRKSLSR--DLEASREAKKKVEADLAALT-- 192
Query: 140 FAGNYAAENLTTRIALPCSDYIGRVIGKDGKNIEAFKKVSGVDI--------EFSEDSSE 191
AE+ + SD + + +D + KK D+ + E+
Sbjct: 193 ------AEHQKLKEEKQISDASRQGLSRDLEASREAKKKVEADLAALTAEHQKLKEEKQI 246
Query: 192 LCLSSFNLYRREVASETLKILIEDGRIQPNRIEEVYHRVARNLEK-ELLSEGESVVLELE 250
S L R AS K +E + N + ++ + LE+ + LSE E L+
Sbjct: 247 SDASRQGLSRDLEASREAKKKVEADLAEANSKLQALEKLNKELEEGKKLSEKEKAELQAR 306
Query: 251 LGAMEDELKILIGK 264
L A LK + K
Sbjct: 307 LEAEAKALKEQLAK 320
>ref|NP_172024.1| (NM_100411) unknown protein [Arabidopsis thaliana]
gb|AAB71445.1| (AC000098) ESTs gb|AA042402,gb|ATTS1380 come from this gene.
[Arabidopsis thaliana]
Length = 841
Score = 43.9 bits (102), Expect = 0.004
Identities = 114/471 (24%), Positives = 185/471 (39%), Gaps = 92/471 (19%)
Query: 20 DKKEAHLKHLE-------AQHKEFVRDEKRY----LEKE---KKELEKERQI----LEQE 61
+K E LK LE +HKE ++ + LE E KK +E E +I LE E
Sbjct: 68 EKAEKQLKSLEDALQLHDVKHKELTEVKEAFDGLGLELENSRKKMIELEDRIRISALEAE 127
Query: 62 K-ENFKKQRAVCKESQAKALDAM-----------LNYMAYTKDEIKSMILEQLEEELEAQ 109
K E +KQ A E + K D L+ + + ++KS LE+L E++
Sbjct: 128 KLEELQKQSASELEEKLKISDERYSKTDALLSQALSQNSVLEQKLKS--LEELSEKVSEL 185
Query: 110 KSALIRRYEKEAKEEGKKKSYAI-------------LAEATARFAGNYAAENLTTRIALP 156
KSALI A+EEGKK S + L +++AR + E+L RIAL
Sbjct: 186 KSALI-----VAEEEGKKSSIQMQEYQEKVSKLESSLNQSSAR--NSELEEDL--RIALQ 236
Query: 157 CS---DYIGRVIGKDGKNIEAFKKVSGVDIEFSEDSSELCLSSFNLYRREVASETLKILI 213
+ IG V K ++ + S + +E +E+ + L + + + TL + +
Sbjct: 237 KGAEHEDIGNVSTKRSVELQGLFQTSQLKLEKAEEKLK-DLEAIQV-KNSSLEATLSVAM 294
Query: 214 EDGRIQPNRIEEVYHRV---ARNLEKELLSEGESVVLELELGAMEDELKILIGK----MR 266
E R + V ++ LEK+ E+ +EL A+ ++ + K
Sbjct: 295 EKERDLSENLNAVMEKLKSSEERLEKQAREIDEATTRSIELEALHKHSELKVQKTMEDFS 354
Query: 267 YRSSFGQNALQHSKE----VALLAGLIAEQLGGDKKLARRAG-------ILHDIGKAL-- 313
R + ++ + SK+ + + G +AE G L +L D L
Sbjct: 355 SRDTEAKSLTEKSKDLEEKIRVYEGKLAEACGQSLSLQEELDQSSAENELLADTNNQLKI 414
Query: 314 -TQEL-GRDHVNLGVEVCKRHKEDPVVINAIYAHHGHEEILSVECASVCAADALSAGRPG 371
QEL G + K +++D + I HE ++ V A +G
Sbjct: 415 KIQELEGYLDSEKETAIEKLNQKDTEAKDLITKLKSHENVIEEHKRQVLEA----SGVAD 470
Query: 372 ARRKSDEEYAKRMQALEEIALEFDGVEKAYAMESGRELRVIVKSNQVRDNQ 422
R+ EE ++ LE E + E+G V +K NQ NQ
Sbjct: 471 TRKVEVEEALLKLNTLESTIEELE-------KENGDLAEVNIKLNQKLANQ 514
>ref|NP_005981.1| (NM_005990) serine/threonine kinase 10 [Homo sapiens]
sp|O94804|ST10_HUMAN Serine/threonine-protein kinase 10 (Lymphocyte-oriented kinase)
dbj|BAA35073.1| (AB015718) protein kinase [Homo sapiens]
Length = 968
Score = 43.9 bits (102), Expect = 0.004
Identities = 26/105 (24%), Positives = 56/105 (52%), Gaps = 6/105 (5%)
Query: 21 KKEAHLKHLEAQHKEFVRDEKRYLEKEKKEL--EKERQILEQEKENFKKQRAVCKESQAK 78
K E H + + ++FV +K LE K L + R+I ++E+E K++ + ++ +A
Sbjct: 683 KMEEHTQKKQLLDRDFVAKQKEDLELAMKRLTTDNRREICDKERECLMKKQELLRDREA- 741
Query: 79 ALDAMLNYMAYTKDEIKSMILEQLEEELEAQKSALIRRYEKEAKE 123
A+ + E ++ +QL+++ Q+ L+R++EKE ++
Sbjct: 742 ---ALWEMEEHQLQERHQLVKQQLKDQYFLQRHELLRKHEKEREQ 783
>ref|NP_149129.1| (NM_033138) caldesmon 1, isoform 1; L-CAD; H-CAD; NAG22 protein;
l-caldesmon I [Homo sapiens]
sp|Q05682|CALD_HUMAN Caldesmon (CDM)
pir||JH0628 caldesmon - human
gb|AAA58419.1| (M83216) caldesmon [Homo sapiens]
Length = 793
Score = 43.9 bits (102), Expect = 0.004
Identities = 28/112 (25%), Positives = 61/112 (54%), Gaps = 7/112 (6%)
Query: 20 DKKEAHLKHLEAQHKEFVRDEKRYLEKEKKELEKERQILEQEKENFKKQRAVCKESQAKA 79
+++EA + + ++ +E++ +++E+K +ERQ +++E++ ++R KE + +A
Sbjct: 307 ERREAEERERMREEEKRAAEERQRIKEEEKRAAEERQRIKEEEKRAAEERQRIKEEEKRA 366
Query: 80 LDAMLNYMAYTKDEIKSMILE-----QLEEELEAQKSALIRRYEKEAKEEGK 126
+ A ++E K+ + E QLEE+ A + I+ + E K EGK
Sbjct: 367 AEE--RQRARAEEEEKAKVEEQKRNKQLEEKKRAMQETKIKGEKVEQKIEGK 416
>sp|P22793|TRHY_SHEEP Trichohyalin
pir||A40691 trichohyalin - sheep
emb|CAA79165.1| (Z18361) trichohyalin [Ovis aries]
Length = 1549
Score = 43.9 bits (102), Expect = 0.004
Identities = 61/275 (22%), Positives = 115/275 (41%), Gaps = 35/275 (12%)
Query: 27 KHLEAQHKEFVRDEKRYLEKEKKELEKERQILEQEKENFKKQRAVCKESQAKALDAMLNY 86
+ L+ Q +E R E+ EK EL++E Q+ QE+E +++R + + L+ L
Sbjct: 602 EQLQRQEREKRRQERERQYLEKVELQEEEQVQRQEREKRRQER------ERQYLEKELQR 655
Query: 87 MAYTKDEIKSMILEQLE-----------EELEAQKSALIRRYEKEAKEEGKKKSY----- 130
E + ++ E+ E E++E Q+ ++R E+E + + +++ Y
Sbjct: 656 QEERLQEEEQLLREEREKRRQERERQYLEKVELQEEEQLQREEREKRRQERERQYLEKEE 715
Query: 131 -AILAEATARFAGNYAAENLTTRIALPCSDYIGRVIGKDGKNIEAFKKVSGVDIEFSE-- 187
E R E+ R + Y+ + ++ ++ K++ D E +
Sbjct: 716 LQRQEERLQREKEQLQREDREKRRQVRERKYLEEELQQEEDRLQREKQLLREDREKRQYL 775
Query: 188 DSSELCLSSFNLYRREVASETLKILIEDGRIQPNRIEEVYHRVARNLEKELLSEGESVVL 247
+ EL L R + E + E+ + R EE HR + L++E + L
Sbjct: 776 EKVELQREEEQLQREKRRQERERQYREEELL---REEERLHRKEQQLQREECEKRRRQEL 832
Query: 248 ELELGAMEDELKILIGKMRYRSSFGQNALQHSKEV 282
E +L E+EL+ L K ++R QH EV
Sbjct: 833 ERQL--EEEELQRLDRKRQFRDDD-----QHQNEV 860
>ref|XP_147228.1| (XM_147228) myosin heavy chain 11, smooth muscle [Mus musculus]
Length = 1938
Score = 43.5 bits (101), Expect = 0.005
Identities = 67/326 (20%), Positives = 143/326 (43%), Gaps = 41/326 (12%)
Query: 6 AIWKTRIWQLQTHFDKKEAHLK------HLEAQHKEF--VRDEKRYLEKEKKELEKERQI 57
A K R WQ F K + L+ ++A+ +E +++ ++ E E KELE++
Sbjct: 825 AYLKLRNWQWWRLFTKVKPLLQVTRQEEEMQAKEEEMQKIKERQQKAETELKELEQKHTQ 884
Query: 58 LEQEKENFKKQRAVCKESQAKALDAMLNYMAYTKDEIKSMILE---QLEEE------LEA 108
L +EK ++Q E A+A + M +A K E++ ++ E +LEEE L+A
Sbjct: 885 LAEEKTLLQEQLQAETELYAEA-EEMRVRLAAKKQELEEILHEMEARLEEEEDRGQQLQA 943
Query: 109 QKSALIRR---YEKEAKEEGKKKSYAILAEATARFAGNYAAENLTTRIALPCSDYIGRVI 165
++ + ++ E++ +EE + L + TA +++ D +
Sbjct: 944 ERKKMAQQMLDLEEQLEEEEAARQKLQLEKVTAEAKIKKLEDDILV------MDDQNSKL 997
Query: 166 GKDGKNIEAFKKVSGVDIEFSEDSSELCLSSFNLYRREVASETLKILIEDGRIQPNRIEE 225
K+ K +E ++VS + +E+ + + NL + + E++ +E + + +
Sbjct: 998 SKERKLLE--ERVSDLTTNLAEEEEK----AKNLTKLKSKHESMISELEVRLKKEEKSRQ 1051
Query: 226 VYHRVARNLEKELLSEGESVV--------LELELGAMEDELKILIGKMRYRSSFGQNALQ 277
++ R LE + E + L+++L E+EL+ + ++ + NAL+
Sbjct: 1052 ELEKLKRKLEGDASDFHEQIADLQAQIAELKMQLAKKEEELQAALARLDEEIAQKNNALK 1111
Query: 278 HSKEVALLAGLIAEQLGGDKKLARRA 303
+E+ + E L ++ +A
Sbjct: 1112 KIRELEGHISDLQEDLDSERAARNKA 1137
>ref|NP_126901.1| (NC_000868) purine NTPase, putative [Pyrococcus abyssi]
sp|Q9UZC8|RA50_PYRAB DNA double-strand break repair rad50 ATPase
pir||F75103 probable purine NTPase PAB0812 - Pyrococcus abyssi (strain Orsay)
emb|CAB50131.1| (AJ248286) purine NTPase, putative [Pyrococcus abyssi]
Length = 880
Score = 43.5 bits (101), Expect = 0.005
Identities = 40/144 (27%), Positives = 70/144 (47%), Gaps = 27/144 (18%)
Query: 22 KEAHLKHLEAQHKEF-VRDEKRYLEKEKKELEKERQIL---------------------E 59
+E H K++EA+ E +R+ K LEKEK EL++ ++L
Sbjct: 599 EEFHDKYVEAKKSESELRELKNKLEKEKTELDQAFEMLADVENEIEEKEAKLKDLESKFN 658
Query: 60 QEKENFKKQRAVCKESQAKALDAMLNYMAYTKDEIKSMILEQLEEELEAQKSAL-IRRYE 118
+E+ K++R V E + +L A L + + ++IK+ + + EE+ E +K+ L I++ E
Sbjct: 659 EEEYEEKRERLVKLEREVSSLTARLEELKKSVEQIKATLRKLKEEKEEREKAKLEIKKLE 718
Query: 119 KEAKE----EGKKKSYAILAEATA 138
K + K K Y LA+ A
Sbjct: 719 KALSKVEDLRKKIKDYKTLAKEQA 742
>pir||A41604 myosin heavy chain, smooth muscle, long splice form - rabbit
Length = 1972
Score = 43.5 bits (101), Expect = 0.005
Identities = 62/322 (19%), Positives = 144/322 (44%), Gaps = 33/322 (10%)
Query: 6 AIWKTRIWQLQTHFDKKEAHLK------HLEAQHKEF--VRDEKRYLEKEKKELEKERQI 57
A K R WQ F K + L+ ++A+ E +++ ++ E E +EL+++
Sbjct: 825 AYLKLRNWQWWRLFTKVKPLLQVTRQEEEMQAKEDELQKIKERQQKAESELQELQQKHTQ 884
Query: 58 LEQEKENFKKQRAVCKESQAKALDAMLNYMAYTKDEIKSMILE---QLEEE------LEA 108
L +EK ++Q E A+A + M +A K E++ ++ E +LEEE L+A
Sbjct: 885 LSEEKNLLQEQLQAETELYAEA-EEMRVRLAAKKQELEEILHEMEARLEEEEDRGQQLQA 943
Query: 109 QKSALIRRY---EKEAKEEGKKKSYAILAEATARFAGNYAAENLTTRIALPCSDYIGRVI 165
++ + ++ E++ +EE + L + TA +++ D +
Sbjct: 944 ERKKMAQQMLDLEEQLEEEEAARQKLQLEKVTAEAKIKKLEDDILVM------DDQNNKL 997
Query: 166 GKDGKNIEAFKKVSGVDIEFSEDSSELCLSSFNLYRREVASETLKILIEDGRIQPNRIEE 225
K+ K +E +++S + +E+ + + + E L++ ++ +E+
Sbjct: 998 SKERKLLE--ERISDLTTNLAEEEEKAKNLTKLKNKHESMISELEVRLKKEEKSRQELEK 1055
Query: 226 VYHRV---ARNLEKELLS-EGESVVLELELGAMEDELKILIGKMRYRSSFGQNALQHSKE 281
+ ++ A +L +++ + + L+++L E+EL+ + ++ +S NAL+ +E
Sbjct: 1056 LKRKMDGEASDLHEQIADLQAQIAELKMQLAKKEEELQAALARLEDETSQKNNALKKIRE 1115
Query: 282 VALLAGLIAEQLGGDKKLARRA 303
+ + E L ++ +A
Sbjct: 1116 LEGHISDLQEDLDSERAARNKA 1137
>ref|NP_505094.1| (NM_072693) myosin [Caenorhabditis elegans]
pir||T30010 hypothetical protein F58G4.1 - Caenorhabditis elegans
gb|AAG24132.1| (U50309) Hypothetical protein F58G4.1 [Caenorhabditis elegans]
Length = 1974
Score = 43.5 bits (101), Expect = 0.005
Identities = 70/286 (24%), Positives = 123/286 (42%), Gaps = 18/286 (6%)
Query: 21 KKEAHLKHLEAQHKEFVRDEKRYLEKEKKELEKERQILEQEKENFKKQRAVCKESQAKAL 80
KK + LE + K + +EK E+++K++E E LE EK+ Q ++S A+
Sbjct: 854 KKNEEFEALEKKFK-VLEEEKTQEERKRKDMEAENARLEAEKQALLIQLEQERDSSAEGE 912
Query: 81 DAMLNYMAYTKDEIKSM--ILEQLEEELEAQKSALIRRYEK-EAKEEGKKKSYAILAEAT 137
+ +A D K M + +QL +E E + +AL ++ +K E EG KK+ + L
Sbjct: 913 ERSAKLLAQKADLEKQMANMNDQLCDE-EEKNAALTKQKKKIEQDNEGLKKTVSDLETTI 971
Query: 138 ARFAGNYAAENLTTRI---ALPCSDYIGRVIGKDGKNIEAFKKVSGVDIEFSEDSSELCL 194
+ A++ R + D + + K+ K+ E + DI+ ED
Sbjct: 972 KKQESEKQAKDHQIRSLQDEIQSQDEVISKLNKEKKHQEEVNRKLLEDIQAEEDKVN--- 1028
Query: 195 SSFNLYRREVASETLKILIEDGRIQPNRIEEVYHRVARNLEKELLSEGESVVLELELGAM 254
+L + + E+ +ED + R + + R +E EL E + EL
Sbjct: 1029 ---HLNKTKAKLESTLDELEDTLEREKRGRQDCEKQRRKVEGELKIAQELIE---ELNRH 1082
Query: 255 EDELKILIGKMRYRSSFGQNALQHSKE-VALLAGLIAEQLGGDKKL 299
+ E + +I K S Q+ L+ + VA L I E L ++L
Sbjct: 1083 KHEQEQVIKKKDIELSSIQSRLEDEQSLVAKLQRQIKELLARIQEL 1128
>gb|AAB06613.1| (U52008) Emm50 [Streptococcus pyogenes]
Length = 413
Score = 43.5 bits (101), Expect = 0.005
Identities = 75/335 (22%), Positives = 132/335 (39%), Gaps = 27/335 (8%)
Query: 15 LQTHFDKKEAHLKHLEAQHKEFVRDEKRYLEKEKKELEKERQILEQEKENFKKQRAVCKE 74
L+T + + H K + Q +E E+R +E+ E + +R++ ++ +E +KQ+ + KE
Sbjct: 92 LRTLDQEYKEHQKEKQQQQQE---QEERQKYQEQLERQSQREVEKRYQEQLQKQQQLEKE 148
Query: 75 SQA-----KALDAMLNYMAYTKDEIKSMILEQLEEELEAQKSALIRRYEKEAKEEGKKKS 129
Q K+L L K E+++ + EE+ + S + EA E KKK
Sbjct: 149 KQISEASRKSLSRDLEASRAAKKELEAEHQKLKEEKQISDASRQGLSRDLEASREAKKKV 208
Query: 130 YAILAEATARFAGNYAAENLTTRIALPCSDYIGRVIGKDGKNIEAFKKVSGVDI------ 183
A LA T AE+ + S+ + + +D + KK D+
Sbjct: 209 EADLAALT--------AEHQKLKEEKQISEASRQGLSRDLEASREAKKKVEADLAALTAE 260
Query: 184 --EFSEDSSELCLSSFNLYRREVASETLKILIEDGRIQPNRIEEVYHRVARNLEK-ELLS 240
+ E+ S L R AS K +E + N + ++ + LE+ + LS
Sbjct: 261 HQKLKEEKQISDASRQGLSRDLEASREAKKKVEADLAEANSKLQALEKLNKELEEGKKLS 320
Query: 241 EGESVVLELELGAMEDELKILIGKMRYRSSFGQNALQHSKEVALLAGLIAEQLGGDKKLA 300
E E L+ L A LK + K + + + +VA A + K+
Sbjct: 321 EKEKAELQARLEAEAKALKEQLAKQAEELAKLKGNQTPNAKVAPQANRSRSAMTQQKRTL 380
Query: 301 RRAGILHDIGKALTQELGRDHVNLGVEVCKRHKED 335
G T+E V+ G+ KR +E+
Sbjct: 381 PSTG--ETANPFFTEEAATVMVSAGMLALKRKEEN 413
>ref|XP_005341.2| (XM_005341) centrosomal protein 1 [Homo sapiens]
Length = 1773
Score = 43.5 bits (101), Expect = 0.005
Identities = 85/369 (23%), Positives = 154/369 (41%), Gaps = 75/369 (20%)
Query: 15 LQTHFDKKEAHLKHLEAQHKE--FVRDEKRYLEKEKKELEKERQILEQEKENFKKQ---- 68
L+ + E ++HL+++ +E ++R KR EKE +EL L QEK++ + +
Sbjct: 769 LENEVSRLEDIMQHLKSKKREERWMRASKRQSEKEMEELHHNIDDLLQEKKSLECEVEEL 828
Query: 69 -RAVCKESQAK-ALDAMLNYMAYTKDEIKSMIL--EQLEEELEAQKSALIRRYEKEAKEE 124
R V K Q K +D + + T+ EI+ + E + +E+E + L++R E +E
Sbjct: 829 HRTVQKRQQQKDFIDGNVESL-MTELEIEKSLKHHEDIVDEIECIEKTLLKR-RSELREA 886
Query: 125 GKKKSYAILAEATARFAGNYAAENLT----------------------TRIALPCSDYIG 162
+ + A + + A E T T + L +D
Sbjct: 887 DRLLAEAESELSCTKEKTKNAVEKFTDAKRSLLQTESDAEELERRAQETAVNLVKADQQL 946
Query: 163 RVIGKDGKNIEAFK-KVSGV-----DIEFSEDSSELCLSSFNLYRREVASETLKIL---- 212
R + D K++E K K + I ++DS CLS ++E +E L+ L
Sbjct: 947 RSLQADAKDLEQHKIKQEEILKEINKIVAAKDSDFQCLSK----KKEKLTEELQKLQKDI 1002
Query: 213 -----IEDGRIQPNRIEEVYHRVARNLEKELLS-----EGESVVLELELGAMEDELKILI 262
ED +Q + EV + R ++L S + E VL+ +LG ++EL +L
Sbjct: 1003 EMAERNEDHHLQVLKESEVLLQAKRAELEKLKSQVTSQQQEMAVLDRQLGHKKEELHLLQ 1062
Query: 263 GKMRYRSSFGQNALQHSKEVALLAGLIAEQLGGDKKLARRAGILHDIGKALTQELGRDHV 322
G M + Q AL+ G+ ++ + + ++ K+L +EL
Sbjct: 1063 GSMVQAKADLQEALRL----------------GETEVTEKCNHIREV-KSLLEELSFQKG 1105
Query: 323 NLGVEVCKR 331
L V++ +R
Sbjct: 1106 ELNVQISER 1114
>dbj|BAB00616.1| (AB036839) ezrin/radixin/moesin (ERM)-like protein [Ciona
intestinalis]
Length = 609
Score = 43.5 bits (101), Expect = 0.005
Identities = 54/260 (20%), Positives = 108/260 (40%), Gaps = 14/260 (5%)
Query: 21 KKEAHLKHLEAQHKEFVRDEKRYLEKEKKELEKERQILEQEKENFKKQ------RAVCKE 74
++E H K LE Q E R + +EK+K+ E+ Q L+++ E F+ + + K+
Sbjct: 334 REEKHKKELERQALERERGIRVKIEKDKEAAERRTQELQEQMEKFQAENQRYQAEILLKQ 393
Query: 75 SQAKALDAMLNYMAYTKDEIKSMILEQLEEELEAQKSALIRRYEKEAKEEGKKKSYAILA 134
A+ L+ + EI+ + + EE Q+ + EKE E+ ++ +
Sbjct: 394 QAAQKLEEEKLRADQERKEIEELRKQAEEEARALQEKQAVTELEKEEMEKDIQRKLKEI- 452
Query: 135 EATARFAGNYAAENLTTRIALPCSDYIGRVIGKDGKNIEAFKKVSGVDIEFSEDSSELCL 194
E EN R ++ R + + +KV + I + + L
Sbjct: 453 EDLKNVEEEKERENAEWRKKAQEAEEAIRAKESELATLMLSQKVEPIVIAENVEQENASL 512
Query: 195 SSFNLYRREVASETLKILIEDGRIQPNRIEE-----VYHRVARNLEKELLSEGESVVLEL 249
S+ Y ASE +E R + NR+ E + +NL+++L ++ V
Sbjct: 513 SAEG-YDDNEASELNHEEVERDRDEENRVTESEKNKALQQQLQNLQEQLSQLRDNNVTST 571
Query: 250 ELGAMEDELKILIGKMRYRS 269
++ + +E + G+ +Y++
Sbjct: 572 QMDILHNE-NVKAGRDKYKT 590
>gb|AAH26142.1| (BC026142) Unknown (protein for MGC:13920) [Mus musculus]
Length = 1972
Score = 43.5 bits (101), Expect = 0.005
Identities = 67/326 (20%), Positives = 143/326 (43%), Gaps = 41/326 (12%)
Query: 6 AIWKTRIWQLQTHFDKKEAHLK------HLEAQHKEF--VRDEKRYLEKEKKELEKERQI 57
A K R WQ F K + L+ ++A+ +E +++ ++ E E KELE++
Sbjct: 825 AYLKLRNWQWWRLFTKVKPLLQVTRQEEEMQAKEEEMQKIKERQQKAETELKELEQKHTQ 884
Query: 58 LEQEKENFKKQRAVCKESQAKALDAMLNYMAYTKDEIKSMILE---QLEEE------LEA 108
L +EK ++Q E A+A + M +A K E++ ++ E +LEEE L+A
Sbjct: 885 LAEEKTLLQEQLQAETELYAEA-EEMRVRLAAKKQELEEILHEMEARLEEEEDRGQQLQA 943
Query: 109 QKSALIRR---YEKEAKEEGKKKSYAILAEATARFAGNYAAENLTTRIALPCSDYIGRVI 165
++ + ++ E++ +EE + L + TA +++ D +
Sbjct: 944 ERKKMAQQMLDLEEQLEEEEAARQKLQLEKVTAEAKIKKLEDDILV------MDDQNSKL 997
Query: 166 GKDGKNIEAFKKVSGVDIEFSEDSSELCLSSFNLYRREVASETLKILIEDGRIQPNRIEE 225
K+ K +E ++VS + +E+ + + NL + + E++ +E + + +
Sbjct: 998 SKERKLLE--ERVSDLTTNLAEEEEK----AKNLTKLKSKHESMISELEVRLKKEEKSRQ 1051
Query: 226 VYHRVARNLEKELLSEGESVV--------LELELGAMEDELKILIGKMRYRSSFGQNALQ 277
++ R LE + E + L+++L E+EL+ + ++ + NAL+
Sbjct: 1052 ELEKLKRKLEGDASDFHEQIADLQAQIAELKMQLAKKEEELQAALARLDEEITQKNNALK 1111
Query: 278 HSKEVALLAGLIAEQLGGDKKLARRA 303
+E+ + E L ++ +A
Sbjct: 1112 KIRELEGHISDLQEDLDSERAARNKA 1137
>gb|AAF73784.1|AF154016_1 (AF154016) surface protein PspC [Streptococcus pneumoniae]
Length = 680
Score = 43.5 bits (101), Expect = 0.005
Identities = 61/256 (23%), Positives = 108/256 (41%), Gaps = 37/256 (14%)
Query: 27 KHLEAQHKEFVRD------EKRYLEKEKKELEKERQILEQEKEN--------FKKQRAVC 72
K L+A ++F +D EK+ E EKK+ E +++ +Q++E+ +K
Sbjct: 130 KELDAAFEQFKKDTLSTEPEKKVAEAEKKDAEAKKKAEDQKEEDRRNYPTNTYKTLELEI 189
Query: 73 KESQAKALDAMLNYM------AYTKDEIKSMILEQLEEELEAQKSALIRRYEKEAKEEGK 126
E K +A L + + +++IK E ++ EA + I+ K+A+EE K
Sbjct: 190 AEFDVKVKEAELELLKEKAKESRDEEKIKQAEAEVESKQAEATRLENIKTDRKKAEEEAK 249
Query: 127 KKSYAILAEATARFAGNYAAENLTTRIALPCSDYIGRVIGKDGKNIEAFKKVSGVDIEFS 186
+K+ A L EA + + R +P G + D K +A S V
Sbjct: 250 RKADAKLKEANVATSDQGKPKGRAKR-GVP-----GELATPDKKENDAKSSDSSV----- 298
Query: 187 EDSSELCLSSFNLYRREVASETLKILIEDGRIQPNRIEEVYHRVARNLEKEL---LSEGE 243
E L S +L + +E K + E + ++ EE N K L ++E +
Sbjct: 299 ---GEETLPSSSLKSGKKVAEAEKKVEEAEKKAKDQKEEDRRNYPTNTYKTLELEIAESD 355
Query: 244 SVVLELELGAMEDELK 259
V + EL +++E K
Sbjct: 356 VKVKKAELELVKEEAK 371
>sp|P35748|MYHB_RABIT Myosin heavy chain, smooth muscle isoform (SMMHC)
gb|AAA31395.1| (M77812) myosin heavy chain [Oryctolagus cuniculus]
Length = 1972
Score = 43.5 bits (101), Expect = 0.005
Identities = 62/322 (19%), Positives = 144/322 (44%), Gaps = 33/322 (10%)
Query: 6 AIWKTRIWQLQTHFDKKEAHLK------HLEAQHKEF--VRDEKRYLEKEKKELEKERQI 57
A K R WQ F K + L+ ++A+ E +++ ++ E E +EL+++
Sbjct: 825 AYLKLRNWQWWRLFTKVKPLLQVTRQEEEMQAKEDELQKIKERQQKAESELQELQQKHTQ 884
Query: 58 LEQEKENFKKQRAVCKESQAKALDAMLNYMAYTKDEIKSMILE---QLEEE------LEA 108
L +EK ++Q E A+A + M +A K E++ ++ E +LEEE L+A
Sbjct: 885 LSEEKNLLQEQLQAETELYAEA-EEMRVRLAAKKQELEEILHEMEARLEEEEDRGQQLQA 943
Query: 109 QKSALIRRY---EKEAKEEGKKKSYAILAEATARFAGNYAAENLTTRIALPCSDYIGRVI 165
++ + ++ E++ +EE + L + TA +++ D +
Sbjct: 944 ERKKMAQQMLDLEEQLEEEEAARQKLQLEKVTAEAKIKKLEDDILVM------DDQNNKL 997
Query: 166 GKDGKNIEAFKKVSGVDIEFSEDSSELCLSSFNLYRREVASETLKILIEDGRIQPNRIEE 225
K+ K +E +++S + +E+ + + + E L++ ++ +E+
Sbjct: 998 SKERKLLE--ERISDLTTNLAEEEEKAKNLTKLKNKHESMISELEVRLKKEEKSRQELEK 1055
Query: 226 VYHRV---ARNLEKELLS-EGESVVLELELGAMEDELKILIGKMRYRSSFGQNALQHSKE 281
+ ++ A +L +++ + + L+++L E+EL+ + ++ +S NAL+ +E
Sbjct: 1056 LKRKMDGEASDLHEQIADLQAQIAELKMQLAKKEEELQAALARLEDETSQKNNALKKIRE 1115
Query: 282 VALLAGLIAEQLGGDKKLARRA 303
+ + E L ++ +A
Sbjct: 1116 LEGHISDLQEDLDSERAARNKA 1137
>gb|AAG01636.1| (AF192756) Orf73 [Human herpesvirus 8]
Length = 976
Score = 43.5 bits (101), Expect = 0.005
Identities = 28/115 (24%), Positives = 66/115 (57%), Gaps = 4/115 (3%)
Query: 16 QTHFDKKEAHLKHLEAQHKEFVRDEKRYLEKEKKELEKERQILEQEKENFKKQRAVCKES 75
Q D++E + + + +E ++++ LE++++ELE++ Q LE++++ ++Q +E
Sbjct: 559 QQQQDEQEQQEEQEQQEEQEQQEEQEQELEEQEQELEEQEQELEEQEQELEEQEQELEE- 617
Query: 76 QAKALDAMLNYMAYTKDEI--KSMILEQLEEELEAQKSALIRRYEKEAKEEGKKK 128
Q + L+ + + E+ + LE+ E+ELE Q+ L E+E +E+ +++
Sbjct: 618 QEQELEEQEQELEEQEQELEEQEQELEEQEQELEEQEQEL-EEQEQELEEQEQEQ 671
>gb|EAA05211.1| (AAAB01008816) agCP6917 [Anopheles gambiae str. PEST]
Length = 2201
Score = 43.5 bits (101), Expect = 0.005
Identities = 68/315 (21%), Positives = 132/315 (41%), Gaps = 48/315 (15%)
Query: 26 LKHLEAQHKEFVRDEKRYLEKEKKELEKERQILEQE---------------KENFKKQRA 70
+K LE Q ++ +E+ L ++K ELE++ LE + K + +K RA
Sbjct: 1798 IKSLECQLEQ-EHEERTQLLRDKHELERKLASLEDQDRAERAAEEAMVQRLKRDARKYRA 1856
Query: 71 VCKESQAKALDAMLNYMAYTKDEIKSMILEQLEEELEAQKSALIRRYEKEAKEEGKKKSY 130
+ +++Q++ LD D ++ QL +LE +SA + + EG+ +
Sbjct: 1857 LLRDAQSQ-LDRAKG------DSASKALVRQLRNQLEDAESARVAALKARQVLEGELQDA 1909
Query: 131 AILAEATARFAGNYAAENLTTRIALPCSDYIGRVIGKDGKNIEAFKKVSGVDIEFSEDSS 190
+L E T R AE+ T ++ ++ + + E KK S + S + S
Sbjct: 1910 QLLFEETQR--ARNEAEDRATVAQRDRAELQAQIDENEEEMAELMKKYSATVKQLSSEQS 1967
Query: 191 ELCLSSFNLYRREVASETLKILIEDGRIQPNRIEEV--------YHRV---ARNLEKEL- 238
+ + E ++LK + + + +E + + R+ + LE L
Sbjct: 1968 LIAEYELRVSELEGEKKSLKEQVVELATRLESVETIGEPSNSMAFKRLELRTKELESRLE 2027
Query: 239 LSEGESVVLELELGAMEDELKILIGKM---RYRSSFGQNALQHSK--------EVALLAG 287
+ +E++L +D L+ L G++ R R + Q+AL+ + E++ LA
Sbjct: 2028 FEQATRARIEIQLARHKDSLEKLQGELSQARNREAQAQDALKKGQKTVRELRDELSTLAN 2087
Query: 288 LIAEQLGGDKKLARR 302
E L K+L +R
Sbjct: 2088 RDQEGLLKRKELEKR 2102
>emb|CAC12741.1| (AJ005004) intermediate filament protein [Glottidia pyramidata]
Length = 620
Score = 43.5 bits (101), Expect = 0.005
Identities = 72/306 (23%), Positives = 127/306 (40%), Gaps = 46/306 (15%)
Query: 2 QIATAIWKTRIWQLQTHFDKKEAHLKHLEAQH-------KEFVRDEKRYLEKEKKELEKE 54
++A+ I K R + Q K A L L+A+ K DE L +++ +LEKE
Sbjct: 124 RLASYIEKVRFLEAQNR--KLSAELDALKAKWGKETAAVKTMYEDELSGLRRDRDDLEKE 181
Query: 55 RQILEQEKENFKKQRAVCKESQAKALDAMLNYMAYTKDEIKSMILEQLEEELEAQKSALI 114
+ +LE + E + Q + + +D NY DEI +I + LE + + L
Sbjct: 182 KDMLETKVEGLEIQIDNLRRENEELIDRQNNY----TDEINRLI--EKVSALEGENNLLK 235
Query: 115 RRYE-KEAKEEGKKKSYAILAEATARFAGNYAAENLTTRIALPCS--------DYIGRVI 165
RR + E + E KK+ + + AE + R+AL C D++ V
Sbjct: 236 RRIDFVEVEYEDAKKNADKWKKQCLQRQMELEAE-IVRRMALECDVKSLQDEMDFMKGVH 294
Query: 166 GKDGKNIEAFKKVSGVDIEFSEDSSELCLSSFNLYRREVASETLKILIEDGRIQPNRIEE 225
++ K + A + ++++ E S ++ +E+ E D R++ NR +
Sbjct: 295 DQEMKELAAL-----AYRDTTQENREYWTSEMSMALKEIQREF------DDRLEANRCDM 343
Query: 226 VYHRVARNLEKELLSEGESVVLELELGAMEDELKILIGKMRYRSSFGQNALQHSKEVALL 285
H + E S +V E+ +++E++ R RS +S+ A L
Sbjct: 344 EQHYQLKIQE----SRNSNVKTGSEIVNLKEEIQ------RLRSQLTDKNQNNSELDAQL 393
Query: 286 AGLIAE 291
A L AE
Sbjct: 394 AALRAE 399
>dbj|BAB84905.1| (AK074079) FLJ00150 protein [Homo sapiens]
Length = 1793
Score = 43.5 bits (101), Expect = 0.005
Identities = 85/369 (23%), Positives = 154/369 (41%), Gaps = 75/369 (20%)
Query: 15 LQTHFDKKEAHLKHLEAQHKE--FVRDEKRYLEKEKKELEKERQILEQEKENFKKQ---- 68
L+ + E ++HL+++ +E ++R KR EKE +EL L QEK++ + +
Sbjct: 789 LENEVSRLEDIMQHLKSKKREERWMRASKRQSEKEMEELHHNIDDLLQEKKSLECEVEEL 848
Query: 69 -RAVCKESQAK-ALDAMLNYMAYTKDEIKSMIL--EQLEEELEAQKSALIRRYEKEAKEE 124
R V K Q K +D + + T+ EI+ + E + +E+E + L++R E +E
Sbjct: 849 HRTVQKRQQQKDFIDGNVESL-MTELEIEKSLKHHEDIVDEIECIEKTLLKR-RSELREA 906
Query: 125 GKKKSYAILAEATARFAGNYAAENLT----------------------TRIALPCSDYIG 162
+ + A + + A E T T + L +D
Sbjct: 907 DRLLAEAESELSCTKEKTKNAVEKFTDAKRSLLQTESDAEELERRAQETAVNLVKADQQL 966
Query: 163 RVIGKDGKNIEAFK-KVSGV-----DIEFSEDSSELCLSSFNLYRREVASETLKIL---- 212
R + D K++E K K + I ++DS CLS ++E +E L+ L
Sbjct: 967 RSLQADAKDLEQHKIKQEEILKEINKIVAAKDSDFQCLSK----KKEKLTEELQKLQKDI 1022
Query: 213 -----IEDGRIQPNRIEEVYHRVARNLEKELLS-----EGESVVLELELGAMEDELKILI 262
ED +Q + EV + R ++L S + E VL+ +LG ++EL +L
Sbjct: 1023 EMAERNEDHHLQVLKESEVLLQAKRAELEKLKSQVTSQQQEMAVLDRQLGHKKEELHLLQ 1082
Query: 263 GKMRYRSSFGQNALQHSKEVALLAGLIAEQLGGDKKLARRAGILHDIGKALTQELGRDHV 322
G M + Q AL+ G+ ++ + + ++ K+L +EL
Sbjct: 1083 GSMVQAKADLQEALRL----------------GETEVTEKCNHIREV-KSLLEELSFQKG 1125
Query: 323 NLGVEVCKR 331
L V++ +R
Sbjct: 1126 ELNVQISER 1134
>ref|NP_011646.1| (NC_001139) Hypothetical ORF; Ygr130cp [Saccharomyces cerevisiae]
sp|P53278|YG3A_YEAST HYPOTHETICAL 92.7 KD PROTEIN IN ASN2-PHB1 INTERGENIC REGION
pir||S64439 hypothetical protein YGR130c - yeast (Saccharomyces cerevisiae)
emb|CAA97143.1| (Z72915) ORF YGR130c [Saccharomyces cerevisiae]
Length = 816
Score = 43.1 bits (100), Expect = 0.007
Identities = 34/129 (26%), Positives = 71/129 (54%), Gaps = 8/129 (6%)
Query: 20 DKKEAHLKHLEAQHKEFVRDEKRYLEKEKKELEKERQILEQEKENFKKQRAVCKESQAKA 79
D++ AH + L+ + +E R E+ LEK+++ELE++ Q + + ++Q K++
Sbjct: 663 DERRAHEEQLKLEAEERKRKEENLLEKQRQELEEQ---AHQAQLDHEQQITQVKQTYNDQ 719
Query: 80 LDAMLNYMAYTKDEIKSMILEQLEEELEAQKSALIRRYEKEAKEEGKKKSYAILAEATAR 139
L + + +A + E++++ E+ L+A+K+ + +K A E K++ IL+ +
Sbjct: 720 LTELQDKLATEEKELEAVKRER--TRLQAEKAIEEQTRQKNADEALKQE---ILSRQHKQ 774
Query: 140 FAGNYAAEN 148
G +AAEN
Sbjct: 775 AEGIHAAEN 783
>pir||S54871 M protein - Streptococcus sp
emb|CAA42693.1| (X60097) M protein [Streptococcus sp.]
Length = 532
Score = 43.1 bits (100), Expect = 0.007
Identities = 55/241 (22%), Positives = 109/241 (44%), Gaps = 25/241 (10%)
Query: 26 LKHLEAQHKEFVRDEKRYLEKEKKELEKERQILEQEKENFKKQRAVCKESQAKALDAMLN 85
LKH Q K+ +++ LE EK +LE+E+QI + +++ ++ +E++ K L+A
Sbjct: 226 LKHELEQEKQKAEADRQTLEAEKAKLEEEKQISDASRQSLRRDLDASREAK-KQLEAEYQ 284
Query: 86 YMAYTKDEIKSMILEQLEEELEAQKSALIRRYEKEAKEEGKKKSYAILAEATARFAGNYA 145
+ K +I + L +L+A + A + + K E + K ++EA+ +
Sbjct: 285 KLEEEK-QISDASRQSLRRDLDASREAKKQLEAEYQKLEEQNK----ISEASRK------ 333
Query: 146 AENLTTRIALPCSDYIGRVIGKDGKNIEAFKKVSGVDIEFSEDSSELCLSSFNLYRREV- 204
R L S + + KD N+ A +++ ++ ++ +S RR++
Sbjct: 334 ----GLRRDLDASREAKKQVEKDLANLTA-------ELDKVKEEKQISDASRKGLRRDLD 382
Query: 205 ASETLKILIEDGRIQPNRIEEVYHRVARNLEK-ELLSEGESVVLELELGAMEDELKILIG 263
AS K +E + N ++ + LE+ + L+E E L+ +L A LK +
Sbjct: 383 ASREAKKQVEKALEEANSKLAALEKLNKELEESKKLTEKEKAELQAKLEAEAKALKEKLA 442
Query: 264 K 264
K
Sbjct: 443 K 443
>gb|AAF35343.1|AF222860_1 (AF222860) M protein precursor [Streptococcus pyogenes]
Length = 221
Score = 43.1 bits (100), Expect = 0.007
Identities = 35/106 (33%), Positives = 56/106 (52%), Gaps = 20/106 (18%)
Query: 22 KEAHLKHLEAQHKEFVRDEKRYLEKEKKELEK--------------ERQILEQEKENFKK 67
K LK +AQ +E ++ EK LEK K ELE+ + + LE+EK +K
Sbjct: 87 KIEELKTAKAQVEEKLKAEKAALEKRKAELEQALEGAMNFSTEDSAKIKALEEEKAALEK 146
Query: 68 QRAVCKESQAKALDAMLNYMAYTKDEIKSMILEQLEEELEAQKSAL 113
++A ++ AL+ +N+ T+D K LE+ + LEA+K+AL
Sbjct: 147 RKAELEQ----ALEGAMNFS--TEDSAKIKALEEEKAALEAKKAAL 186
>gb|AAM34362.1| (AC117082) fimbrin [Dictyostelium discoideum]
Length = 1503
Score = 43.1 bits (100), Expect = 0.007
Identities = 26/105 (24%), Positives = 56/105 (52%), Gaps = 7/105 (6%)
Query: 20 DKKEAHLKHLEAQHKEFVRDEKRYLEKEKKELEKERQILEQEKENFKKQRAVCKESQAKA 79
++K L+ +E + E +R EK +EKE++E ++E + E+E++ +++ + KE + K
Sbjct: 552 EEKRMELERIEEERLEAIRIEKVRIEKEERERKEEEERKEKERKRQEEEERIKKEQEEK- 610
Query: 80 LDAMLNYMAYTKDEIKSMILEQLEEELEAQKSALIRRYEKEAKEE 124
+ +++ K L +E+E + LIR+ E +E+
Sbjct: 611 ------IRQFEEEKKKQEELRLIEQERIRVEQELIRKERLELEEK 649
>pir||A59235 unconventional myosin heavy chain MyoM - slime mold (Dictyostelium
discoideum)
gb|AAD47903.1|AF090533_1 (AF090533) unconventional myosin heavy chain MyoM [Dictyostelium
discoideum]
dbj|BAA84604.1| (AB017910) myoM [Dictyostelium discoideum]
Length = 1737
Score = 43.1 bits (100), Expect = 0.007
Identities = 32/94 (34%), Positives = 51/94 (54%), Gaps = 2/94 (2%)
Query: 37 VRDEKRYLEKEKKELEKERQILEQ-EKENFKKQRAVCKESQAKALDAMLNYMAYTKDEIK 95
+ + KR E+ KKELE++R+ E+ +KE +++R KE + K + K+E K
Sbjct: 937 ILENKRKEEERKKELERQRKEEEERQKELERQRREEEKELERKRKEEERELERQRKEEEK 996
Query: 96 SMILEQLEEELEAQ-KSALIRRYEKEAKEEGKKK 128
++ EEE E + K + EK+ KEE KKK
Sbjct: 997 EQERKRKEEEKEQERKKKEEKEIEKKRKEEEKKK 1030
>gb|AAG49577.1| (AF322916) uveal autoantigen [Homo sapiens]
Length = 1416
Score = 43.1 bits (100), Expect = 0.007
Identities = 88/354 (24%), Positives = 141/354 (38%), Gaps = 58/354 (16%)
Query: 21 KKEAHLKHLEAQHKEFVRDEKRYLEKEKKELEKERQILEQEKENFKKQRAVCK-ESQAKA 79
K +K E +EF RDE + +E E K L+KE + E E+E KK R V + E QAK
Sbjct: 562 KLRNQIKQNEMIVEEFKRDEGKLIE-ENKRLQKELSMCEMERE--KKGRKVTEMEGQAKE 618
Query: 80 LDAML----------NYMAYTKDEIKSMILEQLEEELEAQKS-ALIRRYEKEAKEEGKKK 128
L A L N + +E+ + +E E E +KS + IR+ ++E + K
Sbjct: 619 LSAKLALSIPAEKFENMKSSLSNEVNEKAKKLVEMEREHEKSLSEIRQLKRELENVKAKL 678
Query: 129 SYAILAEATARFAGNYAAENLTTRIALPCSDYIGRVIGKDGKNIEAFKKVSGVDIE---F 185
+ + E E + +R+ + ++ KN K++ V ++
Sbjct: 679 AQHVKPE---------EHEQVKSRLEQKSGELGKKITELTLKNQTLQKEIEKVYLDNKLL 729
Query: 186 SEDSSELCLSSFNLYRREVASETLK----ILIEDGRIQPNRIEEVYHRVARNLEKELLSE 241
E + L + N Y SE +K +I+D + + + Y +EK LL E
Sbjct: 730 KEQAHNLTIEMKNHYVPLKVSEDMKKSHDAIIDDLNRKLLDVTQKYTEKKLEMEK-LLLE 788
Query: 242 GESV---VLELELGAMEDELKILIGKMRYRSSFGQNALQHSKEVALLAGLIAEQLGGDKK 298
+S+ V LE + E +H KE+ L I E +
Sbjct: 789 NDSLSKDVSRLETVFVPPE-------------------KHEKEIIALKSNIVELKKQLSE 829
Query: 299 LARRAGILHDIGKALTQE---LGRDHVNLGVEVCKRHKEDPVVINAIYAHHGHE 349
L ++ G + ALT E L + N V V K H+E + +N A E
Sbjct: 830 LKKKCGEDQEKIHALTSENTNLKKMMSNQYVPV-KTHEEVKMTLNDTLAKTNRE 882
>emb|CAD21337.1| (AL670008) conserved hypothetical protein [Neurospora crassa]
Length = 1750
Score = 43.1 bits (100), Expect = 0.007
Identities = 34/111 (30%), Positives = 61/111 (54%), Gaps = 2/111 (1%)
Query: 21 KKEAHLKHLEAQHKEFVRDEKRYLEKEKKELEKERQILEQEKENFKKQRAVCKESQAKAL 80
+KE L+ KE +++R LEKEK ELEKER+ LE+E+E K++ + + K L
Sbjct: 1343 EKERELEKERELEKERELEKERELEKEK-ELEKERE-LEKERELEKEKELEKEREREKEL 1400
Query: 81 DAMLNYMAYTKDEIKSMILEQLEEELEAQKSALIRRYEKEAKEEGKKKSYA 131
+ + E + ++LE+E E +K + + +++ KE+ K++ A
Sbjct: 1401 EKERELEKEKELEKEREREKELEKEREKEKERELEKEKEKEKEKEKEQQGA 1451
>gb|AAG27458.1|AF305694_1 (AF305694) latent nuclear antigen [Human herpesvirus 8]
Length = 1036
Score = 43.1 bits (100), Expect = 0.007
Identities = 26/115 (22%), Positives = 66/115 (56%), Gaps = 2/115 (1%)
Query: 14 QLQTHFDKKEAHLKHLEAQHKEFVRDEKRYLEKEKKELEKERQILEQEKENFKKQRAVCK 73
+L+ + + + LE Q +E + ++++ LE++++ELE++ Q LE++++ ++Q +
Sbjct: 653 ELEEQEQELDEQEQELEEQEQE-LEEQEQELEEQEQELEEQEQELEEQEQELEEQEQELE 711
Query: 74 ESQAKALDAMLNYMAYTKDEIKSMILEQLEEELEAQKSALIRRYEKEAKEEGKKK 128
E Q + L+ + + E + +E+ E+E E Q+ + E+E +E+ +++
Sbjct: 712 E-QEQELEEQEQELEEQEQEQELEEVEEQEQEQEEQELEEVEEQEQEQEEQEEQE 765
>ref|NP_032471.1| (NM_008445) kinesin family member 3c [Mus musculus]
sp|O35066|KF3C_MOUSE Kinesin-like protein KIF3C
gb|AAC39965.1| (AF013116) kinesin motor protein KIF3C [Mus musculus]
Length = 796
Score = 43.1 bits (100), Expect = 0.007
Identities = 49/230 (21%), Positives = 97/230 (41%), Gaps = 46/230 (20%)
Query: 29 LEAQHKEFVRDEKRYLEKEKKELEKERQILEQEKENFKKQRA-----VCKESQA------ 77
LE + +++D+K LE+EK ++ +R ++ +EK+ +++ + +E QA
Sbjct: 455 LEKNMENYLQDQKERLEEEKAAIQDDRSLVSEEKQKLLEEKEKMLEDLRREQQATELLAA 514
Query: 78 --KALDAML-----NYMAYTKDEIKSMILEQLEEELEAQKSALIRRYEKEAKEEGKKKSY 130
KA+++ L N M +T ++ K + EL+ Q+ A +R E+E ++E
Sbjct: 515 KYKAMESKLLIGGRNIMDHTNEQQKML-------ELKRQEIAEQKRREREMQQE-----M 562
Query: 131 AILAEATARFAGNYAAENLTTRIALPCSDYIGRVIGKDGKNIEAFKKVSGVDIEFSEDSS 190
+ E T G Y++ + K K + + K+ V E +
Sbjct: 563 LVRDEETMELRGTYSSLQQEVEV-------------KTKKLKKLYAKLQAVKAEIQDQHE 609
Query: 191 ELCLSSFNL---YRREVASETLKILIEDGRIQPNRIEEVYHRVARNLEKE 237
E +L + LK LI + I P ++ +R+ + E+E
Sbjct: 610 EYIRVRQDLEEAQNEQTRELKLKYLIIENFIPPEEKNKIMNRLFLDCEEE 659
>gb|AAF86217.1|AF242196_3 (AF242196) SagA [Enterococcus faecium]
gb|AAF87092.1|AF167575_2 (AF167575) secreted antigen SagA [Enterococcus faecium]
Length = 524
Score = 43.1 bits (100), Expect = 0.007
Identities = 40/135 (29%), Positives = 65/135 (47%), Gaps = 9/135 (6%)
Query: 14 QLQTHFDKKEAHLKHLEAQHKEFVRDEKRYLEKEKKELEKERQILEQEKENFKKQRA--- 70
Q T K L + Q K+ V D+K + + KEL + + LE +K + ++A
Sbjct: 138 QAMTTMVKANNDLMEQQKQDKKAVEDKKAENDAKLKELAENQAALESQKGDLLSKQADLN 197
Query: 71 VCKES----QAKALD--AMLNYMAYTKDEIKSMILEQLEEELEAQKSALIRRYEKEAKEE 124
V K S QA A D A LN + ++ I EQ +A++ A + EKEA+E+
Sbjct: 198 VLKTSLAAEQATAEDKKADLNRQKAEAEAEQARIREQQRLAEQARQQAAQEKAEKEAREQ 257
Query: 125 GKKKSYAILAEATAR 139
+ ++ A A +TA+
Sbjct: 258 AEAEAQATQASSTAQ 272
>ref|XP_051463.2| (XM_051463) uveal autoantigen with coiled coil domains and ankyrin
repeats [Homo sapiens]
dbj|BAB13387.2| (AB046781) KIAA1561 protein [Homo sapiens]
Length = 1416
Score = 43.1 bits (100), Expect = 0.007
Identities = 88/354 (24%), Positives = 141/354 (38%), Gaps = 58/354 (16%)
Query: 21 KKEAHLKHLEAQHKEFVRDEKRYLEKEKKELEKERQILEQEKENFKKQRAVCK-ESQAKA 79
K +K E +EF RDE + +E E K L+KE + E E+E KK R V + E QAK
Sbjct: 562 KLRNQIKQNEMIVEEFKRDEGKLIE-ENKRLQKELSMCEMERE--KKGRKVTEMEGQAKE 618
Query: 80 LDAML----------NYMAYTKDEIKSMILEQLEEELEAQKS-ALIRRYEKEAKEEGKKK 128
L A L N + +E+ + +E E E +KS + IR+ ++E + K
Sbjct: 619 LSAKLALSIPAEKFENMKSSLSNEVNEKAKKLVEMEREHEKSLSEIRQLKRELENVKAKL 678
Query: 129 SYAILAEATARFAGNYAAENLTTRIALPCSDYIGRVIGKDGKNIEAFKKVSGVDIE---F 185
+ + E E + +R+ + ++ KN K++ V ++
Sbjct: 679 AQHVKPE---------EHEQVKSRLEQKSGELGKKITELTLKNQTLQKEIEKVYLDNKLL 729
Query: 186 SEDSSELCLSSFNLYRREVASETLK----ILIEDGRIQPNRIEEVYHRVARNLEKELLSE 241
E + L + N Y SE +K +I+D + + + Y +EK LL E
Sbjct: 730 KEQAHNLTIEMKNHYVPLKVSEDMKKSHDAIIDDLNRKLLDVTQKYTEKKLEMEK-LLLE 788
Query: 242 GESV---VLELELGAMEDELKILIGKMRYRSSFGQNALQHSKEVALLAGLIAEQLGGDKK 298
+S+ V LE + E +H KE+ L I E +
Sbjct: 789 NDSLSKDVSRLETVFVPPE-------------------KHEKEIIALKSNIVELKKQLSE 829
Query: 299 LARRAGILHDIGKALTQE---LGRDHVNLGVEVCKRHKEDPVVINAIYAHHGHE 349
L ++ G + ALT E L + N V V K H+E + +N A E
Sbjct: 830 LKKKCGEDQEKIHALTSENTNLKKMMSNQYVPV-KTHEEVKMTLNDTLAKTNRE 882
>ref|NP_014308.1| (NC_001146) Negative affector of Salt
Tolerance; Nst1p [Saccharomyces cerevisiae]
sp|P53935|YNJ1_YEAST HYPOTHETICAL 141.5 KD PROTEIN IN YPT53-RHO2 INTERGENIC REGION
pir||S52734 hypothetical protein YNL091w - yeast (Saccharomyces cerevisiae)
emb|CAA59826.1| (X85811) ORF N2231 [Saccharomyces cerevisiae]
emb|CAA95967.1| (Z71367) ORF YNL091w [Saccharomyces cerevisiae]
Length = 1240
Score = 43.1 bits (100), Expect = 0.007
Identities = 31/102 (30%), Positives = 51/102 (49%), Gaps = 5/102 (4%)
Query: 32 QHKEFVRDEKRYLEKEKKEL-----EKERQILEQEKENFKKQRAVCKESQAKALDAMLNY 86
+ KE + +KR EKEKK L E+E++ E+EKE KK+ + + +A +
Sbjct: 639 REKEEKKQKKREKEKEKKRLQQLAKEEEKRKREEEKERLKKELEEREMRRREAQRKKVEE 698
Query: 87 MAYTKDEIKSMILEQLEEELEAQKSALIRRYEKEAKEEGKKK 128
KDE + LE+ + E Q+ ++ E + K E +KK
Sbjct: 699 AKRKKDEERKRRLEEQQRREEMQEKQRKQKEELKRKREEEKK 740
>ref|NP_509801.1| (NM_077400) Transthyretin-like family [Caenorhabditis elegans]
pir||T24492 hypothetical protein T05A10.3 - Caenorhabditis elegans
emb|CAA92135.1| (Z68108) contains similarity to Pfam domain: PF01060
(Transthyretin-like family), Score=174.5,
E-value=5.6e-49, N=1~cDNA EST EMBL:Z14530 comes from
this gene [Caenorhabditis elegans]
Length = 406
Score = 43.1 bits (100), Expect = 0.007
Identities = 37/124 (29%), Positives = 62/124 (49%), Gaps = 18/124 (14%)
Query: 20 DKKEAHLKHLEAQHKEFVRDEKRYLEKEKKELEKERQILEQ----EKENFKKQRAVCKES 75
D +E H+ H E H E V DE+R +E+E+ LE+E++ L++ E+E+ + + E
Sbjct: 212 DNEEHHVDHQE--HHE-VSDEERRIEEERFRLEEEQKRLDEIRRLEEESLRLEEIRRIEE 268
Query: 76 QAKALDAMLNYMAYTKDEIKSMILEQLEEELEAQKSALIRRYEKEAKEEGKKKSYAILAE 135
+ K + +EI+ EQ ELE ++ E+ A+EE K++ A L E
Sbjct: 269 EKKRI-----------EEIRRQEEEQQRIELERREEERRLESERRAEEERKREEEAKLQE 317
Query: 136 ATAR 139
R
Sbjct: 318 QRRR 321
>gb|AAK02014.1|AF126831_1 (AF126831) enterophilin-2L [Cavia porcellus]
Length = 397
Score = 43.1 bits (100), Expect = 0.007
Identities = 34/125 (27%), Positives = 62/125 (49%), Gaps = 6/125 (4%)
Query: 15 LQTHFDKKEAHLKHLEAQHKEFVRDEKRYLEKEKKELEKERQILEQEKENFKKQRAV--C 72
LQT D+ + + L+ +H + +++EK L K+K+ L+ + L++EKE +K +
Sbjct: 62 LQTKHDQLKEEKETLQTKHDQ-LKEEKEQLRKDKETLQTKHDQLKEEKEQLRKDKETLQT 120
Query: 73 KESQAKALDAMLNYMAYTKDEIKSMILEQLEEELEAQKSALIRRYE--KEAKEEGKKKSY 130
K Q K L T + K L++ +E+L K L +++ KE KE+ +K
Sbjct: 121 KHDQLKEEKEQLRKDKETL-QTKHDQLKEEKEQLRKDKETLQTKHDQLKEEKEQLRKDKE 179
Query: 131 AILAE 135
+ E
Sbjct: 180 TLQTE 184
>pir||JX0178 myosin heavy chain, fast skeletal muscle, adult [validated] - chicken
gb|AAB20215.1| myosin heavy chain [chickens, skeletal muscle, Peptide, 1938 aa]
Length = 1938
Score = 43.1 bits (100), Expect = 0.007
Identities = 58/249 (23%), Positives = 112/249 (44%), Gaps = 22/249 (8%)
Query: 20 DKKEAHLKHLEAQHKEFVRDEKRYLEKEKKELEKERQILEQEKENFKKQRAVCKESQAKA 79
+K+ A++K + E ++E E ++KELE++ +L QEK + + Q +S A A
Sbjct: 848 EKEMANMK----EEFEKTKEELAKSEAKRKELEEKMVVLLQEKNDLQLQVQAEADSLADA 903
Query: 80 LDAMLNYMAYTKDEIKSMILE-----QLEEELEAQKSALIRRYEKEAKEEGKKKSYAILA 134
+ + + TK ++++ I E + EEE+ A+ +A R+ E E E K L
Sbjct: 904 -EERCDQLIKTKIQLEAKIKEVTERAEDEEEINAELTAKKRKLEDECSELKKDIDDLELT 962
Query: 135 EATA---RFAGNYAAENLTTRIALPCSDYIGRVIGKDGKNIEAFKKVSGVDIEFSEDSSE 191
A + A +NLT +A+ D + K+ K ++ + + D++ ED
Sbjct: 963 LAKVEKEKHATENKVKNLTEEMAV--LDETIAKLTKEKKALQEAHQQTLDDLQVEEDKVN 1020
Query: 192 LCLSSFNLYRREVASETLKILIEDGRIQPNRIEEVYHRVARNLEKELLSEGESVV-LELE 250
+ ++V +E Q ++ R R LE +L +S++ LE +
Sbjct: 1021 TLTKAKTKLEQQVDD------LEGSLEQEKKLRMDLERAKRKLEGDLKLAHDSIMDLEND 1074
Query: 251 LGAMEDELK 259
++++LK
Sbjct: 1075 KQQLDEKLK 1083
>sp|P13538|MYSS_CHICK Myosin heavy chain, skeletal muscle, adult
Length = 1939
Score = 43.1 bits (100), Expect = 0.007
Identities = 58/249 (23%), Positives = 112/249 (44%), Gaps = 22/249 (8%)
Query: 20 DKKEAHLKHLEAQHKEFVRDEKRYLEKEKKELEKERQILEQEKENFKKQRAVCKESQAKA 79
+K+ A++K + E ++E E ++KELE++ +L QEK + + Q +S A A
Sbjct: 849 EKEMANMK----EEFEKTKEELAKSEAKRKELEEKMVVLLQEKNDLQLQVQAEADSLADA 904
Query: 80 LDAMLNYMAYTKDEIKSMILE-----QLEEELEAQKSALIRRYEKEAKEEGKKKSYAILA 134
+ + + TK ++++ I E + EEE+ A+ +A R+ E E E K L
Sbjct: 905 -EERCDQLIKTKIQLEAKIKEVTERAEDEEEINAELTAKKRKLEDECSELKKDIDDLELT 963
Query: 135 EATA---RFAGNYAAENLTTRIALPCSDYIGRVIGKDGKNIEAFKKVSGVDIEFSEDSSE 191
A + A +NLT +A+ D + K+ K ++ + + D++ ED
Sbjct: 964 LAKVEKEKHATENKVKNLTEEMAV--LDETIAKLTKEKKALQEAHQQTLDDLQVEEDKVN 1021
Query: 192 LCLSSFNLYRREVASETLKILIEDGRIQPNRIEEVYHRVARNLEKELLSEGESVV-LELE 250
+ ++V +E Q ++ R R LE +L +S++ LE +
Sbjct: 1022 TLTKAKTKLEQQVDD------LEGSLEQEKKLRMDLERAKRKLEGDLKLAHDSIMDLEND 1075
Query: 251 LGAMEDELK 259
++++LK
Sbjct: 1076 KQQLDEKLK 1084
>gb|AAG49576.1| (AF322915) uveal autoantigen [Bos taurus]
Length = 1449
Score = 43.1 bits (100), Expect = 0.007
Identities = 88/354 (24%), Positives = 141/354 (38%), Gaps = 58/354 (16%)
Query: 21 KKEAHLKHLEAQHKEFVRDEKRYLEKEKKELEKERQILEQEKENFKKQRAVCK-ESQAKA 79
K +K E +EF RDE + +E E K L+KE + E E+E KK R V + E QAK
Sbjct: 562 KLRNQIKQNEMIVEEFKRDEGKLIE-ENKRLQKELSMCEMERE--KKGRKVTEMEGQAKE 618
Query: 80 LDAML----------NYMAYTKDEIKSMILEQLEEELEAQKS-ALIRRYEKEAKEEGKKK 128
L A L N + +E+ + +E E E +KS + IR+ ++E + K
Sbjct: 619 LSAKLALSIPAEKFENMKSSLSNEVNEKAKKLVEMEREHEKSLSEIRQLKRELENVKAKL 678
Query: 129 SYAILAEATARFAGNYAAENLTTRIALPCSDYIGRVIGKDGKNIEAFKKVSGVDIE---F 185
+ + E E + +R+ + ++ KN K++ V ++
Sbjct: 679 AQHVKPE---------EHEQVKSRLEQKSGELGKKITELTLKNQTLQKEIEKVYLDNKLL 729
Query: 186 SEDSSELCLSSFNLYRREVASETLK----ILIEDGRIQPNRIEEVYHRVARNLEKELLSE 241
E + L + N Y SE +K +I+D + + + Y +EK LL E
Sbjct: 730 KEQAHNLTIEMKNHYVPLKVSEDMKKSHDAIIDDLNRKLLDVTQKYTEKKLEMEK-LLLE 788
Query: 242 GESV---VLELELGAMEDELKILIGKMRYRSSFGQNALQHSKEVALLAGLIAEQLGGDKK 298
+S+ V LE + E +H KE+ L I E +
Sbjct: 789 NDSLSKDVSRLETVFVPPE-------------------KHEKEIIALKSNIVELKKQLSE 829
Query: 299 LARRAGILHDIGKALTQE---LGRDHVNLGVEVCKRHKEDPVVINAIYAHHGHE 349
L ++ G + ALT E L + N V V K H+E + +N A E
Sbjct: 830 LKKKCGEDQEKIHALTSENTNLKKMMSNQYVPV-KTHEEVKMTLNDTLAKTNRE 882
>pir||T09127 probable erythrocyte-binding protein MAEBL - Plasmodium yoelii
gb|AAC05366.1| (AF031886) erythrocyte binding protein [Plasmodium yoelii yoelii]
Length = 1701
Score = 43.1 bits (100), Expect = 0.007
Identities = 39/135 (28%), Positives = 69/135 (50%), Gaps = 11/135 (8%)
Query: 21 KKEAHLKHLEAQHKEFVRDEKRYLEKEKKELEKERQILEQEKENFKKQRAVCKESQAKAL 80
K E K +EA+ K +E++ +E EKK E+ER+ +E K+ ++++ + E +A+
Sbjct: 1414 KAEEERKRIEAEKK--AEEERKRIEAEKKA-EEERKRIEAVKKAEEERKRIEAEKKAEEE 1470
Query: 81 DAMLNYMAYTKDEIKSMILEQLEEE----LEAQKSALIRRYEKEA--KEEGKKKSYAILA 134
+ + ++E K + E+ EE +EA K A R + EA KEE K + L+
Sbjct: 1471 RKRIEAVKKAEEERKRIEAEKKAEEERKIIEAAKKAEEERIKAEAVKKEEEVIKKNSNLS 1530
Query: 135 EATARFAGNYAAENL 149
E + + NY N+
Sbjct: 1531 E--TKISNNYETRNI 1543
>sp|P13540|MYH7_MESAU Myosin heavy chain, cardiac muscle beta isoform (MyHC-beta)
pir||I48153 myosin heavy chain beta, cardiac muscle [similarity] - golden hamster
gb|AAA62313.1| (L12104) beta-myosin heavy chain [Mesocricetus auratus]
prf||2116354A beta myosin:SUBUNIT=heavy chain [Mesocricetus auratus]
Length = 1934
Score = 42.7 bits (99), Expect = 0.009
Identities = 67/289 (23%), Positives = 120/289 (41%), Gaps = 27/289 (9%)
Query: 27 KHLEAQHKEF--VRDEKRYLEKEKKELEKERQILEQEKENFKKQRAVCKESQAKA---LD 81
K + +EF V+D E +KELE++ L QEK + + Q +++ A A D
Sbjct: 846 KEMATMKEEFGRVKDALEKSEARRKELEEKMVSLLQEKNDLQLQVQAEQDNLADAEERCD 905
Query: 82 AMLNYMAYTKDEIKSMILEQL--EEELEAQKSALIRRYEKEAKEEGKKKSYAILAEATA- 138
++ + ++K M E+L EEE+ A+ +A R+ E E E + L A
Sbjct: 906 QLIKNKIQLEAKVKEM-TERLEDEEEMNAELTAKKRKLEDECSELKRDIDDLELTLAKVE 964
Query: 139 --RFAGNYAAENLTTRIALPCSDYIGRVIGKDGKNIEAFKKVSGVDIEFSEDSSELCLSS 196
+ A +NLT +A D I + K+ K ++ + + D++ ED
Sbjct: 965 KDKHATENKVKNLTEEMA--GLDEIIAKLTKEKKALQEAHQQALDDLQAEEDKVN----- 1017
Query: 197 FNLYRREVASETLKILIEDGRIQPNRIEEVYHRVARNLEKELLSEGESVV--------LE 248
L + +V E +E Q ++ R R LE +L ES++ L+
Sbjct: 1018 -TLTKSKVKLEQQVDDLEGSLEQEKKVRMDLERAKRKLEGDLKLTQESIMDLENDKQQLD 1076
Query: 249 LELGAMEDELKILIGKMRYRSSFGQNALQHSKEVALLAGLIAEQLGGDK 297
+L + EL L ++ + G + KE+ + E+L ++
Sbjct: 1077 EKLKKKDFELNALNARIEDEQALGSQLQKKLKELQARIEELEEELEAER 1125
>emb|CAB63561.1| (AL031746) hypothetical garp protein [Plasmodium falciparum 3D7]
Length = 673
Score = 42.7 bits (99), Expect = 0.009
Identities = 35/114 (30%), Positives = 58/114 (50%), Gaps = 10/114 (8%)
Query: 16 QTHFDKKEAHLKHLEAQHKEFVRDEKRYLEKEKKEL-EKERQILEQEKENFKKQRAVCKE 74
+T D K+ +++ KE + E+ +KKE +KE+++ EQEK KK++ KE
Sbjct: 230 ETSNDTKDNDKENISEDKKEDHQQEEMLKTLDKKERKQKEKEMKEQEKIEKKKKKQEEKE 289
Query: 75 SQAKALDAMLNYMAYTKDEIKSMILEQLEEELEAQKSALIRRYEKEAKEEGKKK 128
+ + + K E K +Q E+E++ QK R +KE KE+ KKK
Sbjct: 290 KKKQEKER-------KKQEKKER--KQKEKEMKKQKKIEKERKKKEEKEKKKKK 334
>ref|XP_122199.1| (XM_122199) similar to Serine/threonine-protein kinase 10
(Lymphocyte-oriented kinase) [Mus musculus]
Length = 966
Score = 42.7 bits (99), Expect = 0.009
Identities = 25/105 (23%), Positives = 57/105 (53%), Gaps = 6/105 (5%)
Query: 21 KKEAHLKHLEAQHKEFVRDEKRYLEKEKKEL--EKERQILEQEKENFKKQRAVCKESQAK 78
K E H + + ++FV +K LE ++L E R+I ++E++ K++ + ++ +A
Sbjct: 682 KMEEHSQKKQRLDRDFVAKQKEDLELAMRKLTTENRREICDKERDCLSKKQELLRDREA- 740
Query: 79 ALDAMLNYMAYTKDEIKSMILEQLEEELEAQKSALIRRYEKEAKE 123
A+ + E ++ +QL+++ Q+ L+R++EKE ++
Sbjct: 741 ---ALWEMEEHQLQERHQLVKQQLKDQYFLQRHDLLRKHEKEREQ 782
>sp|P08799|MYS2_DICDI Myosin II heavy chain, non muscle
pir||A26655 myosin heavy chain [similarity] - slime mold (Dictyostelium
discoideum)
gb|AAA33227.1| (M14628) myosin heavy chain [Dictyostelium discoideum]
Length = 2116
Score = 42.7 bits (99), Expect = 0.009
Identities = 30/115 (26%), Positives = 62/115 (53%), Gaps = 14/115 (12%)
Query: 11 RIWQLQTHFDKKEAHLKHLEAQHKEFVRDEKRYLEKEKKELEKERQILEQEKENFKKQRA 70
R+ +++ D+K+ L++L+ Q K V ++ R LE+E +E +K R LE+ K+ ++++
Sbjct: 899 RVEDMESELDEKKLALENLQNQ-KRSVEEKVRDLEEELQEEQKLRNTLEKLKKKYEEE-- 955
Query: 71 VCKESQAKALDAMLNYMAYTKDEIKSMILEQLEEELEAQKSALIRRYEKEAKEEG 125
L+ M D I LE++++EL+ + L + +E+K++G
Sbjct: 956 ---------LEEMKRVNDGQSDTISR--LEKIKDELQKEVEELTESFSEESKDKG 999
>ref|NP_111590.1| (NC_002689) Predicted hydrolase (HD superfamily) [Thermoplasma
volcanium]
dbj|BAB60239.1| (AP000995) hypothetical protein [Thermoplasma volcanium]
Length = 338
Score = 42.7 bits (99), Expect = 0.009
Identities = 29/104 (27%), Positives = 46/104 (43%), Gaps = 11/104 (10%)
Query: 267 YRSSFGQNALQHSKEVALLAGLIAEQLGGDKKLARRAGILHDIGKALTQELGRDHVNLGV 326
Y+ + H K V LA IA++ D L +LHDIG+ TQ G H +G
Sbjct: 180 YKYGASDYLINHVKSVKELAVAIAKKTNADINLVTAGALLHDIGR--TQVQGITHAVVGA 237
Query: 327 EVCKRHKEDPVVINAIYAHHGHEEILSVECASVCAADALSAGRP 370
++ +R D V++ + H G A + + +A+ G P
Sbjct: 238 DILRREGIDDRVVSIVEKHIG---------AGIQSEEAVKLGLP 272
>ref|NP_033314.1| (NM_009288) serine/threonine kinase 10 [Mus musculus]
sp|O55098|ST10_MOUSE Serine/threonine-protein kinase 10 (Lymphocyte-oriented kinase)
dbj|BAA24073.1| (D89728) LOK [Mus musculus]
Length = 966
Score = 42.7 bits (99), Expect = 0.009
Identities = 25/105 (23%), Positives = 57/105 (53%), Gaps = 6/105 (5%)
Query: 21 KKEAHLKHLEAQHKEFVRDEKRYLEKEKKEL--EKERQILEQEKENFKKQRAVCKESQAK 78
K E H + + ++FV +K LE ++L E R+I ++E++ K++ + ++ +A
Sbjct: 682 KMEEHSQKKQRLDRDFVAKQKEDLELAMRKLTTENRREICDKERDCLSKKQELLRDREA- 740
Query: 79 ALDAMLNYMAYTKDEIKSMILEQLEEELEAQKSALIRRYEKEAKE 123
A+ + E ++ +QL+++ Q+ L+R++EKE ++
Sbjct: 741 ---ALWEMEEHQLQERHQLVKQQLKDQYFLQRHDLLRKHEKEREQ 782
>pir||A59282 nonmuscle myosin II heavy chain A - African clawed frog
gb|AAC83556.1| (AF055895) nonmuscle myosin II heavy chain A [Xenopus laevis]
Length = 1964
Score = 42.7 bits (99), Expect = 0.009
Identities = 68/320 (21%), Positives = 135/320 (41%), Gaps = 29/320 (9%)
Query: 6 AIWKTRIWQ-----------LQTHFDKKEAHLKHLEAQHKEFVRDEKRYLEKEKKELEKE 54
A K R WQ LQ + +E H K +E Q ++D + E++ E+E
Sbjct: 818 AYLKLRNWQWWRLFTKVKPLLQANRFDEELHAKEVELQK---IKDLQVSSEQKVSEMENV 874
Query: 55 RQILEQEKENFKKQRAVCKESQAKALDAMLNYMAYTKDEIKSMILEQLEE--ELEAQKSA 112
+ +L+QEK ++Q E A+A + M +A K E++ IL LE E E ++
Sbjct: 875 QMMLQQEKMQLQEQLQAEIELCAEA-EEMRARLANKKQELEE-ILHDLESRVEEEEERCQ 932
Query: 113 LIRRYEKEAKEEGKKKSYAILAEATARFAGNYAAENLTTRIALPCSDYIGRVIGKDGKNI 172
+++ +K+ ++ + + E AR E +T + + V+ +
Sbjct: 933 ILQTEKKKMQQNIVELEEQLEEEEAAR--QKLQLEKVTAEAKMKKLEEDVLVLEDQNTKL 990
Query: 173 EAFKKVSGVDI-EFSEDSSELCLSSFNLYRREVASETLKILIEDGRIQPNRIEEVYHRVA 231
KK+ I EF+ + +E S +L + + ET+ +E+ + + + +
Sbjct: 991 GKEKKLYEERIAEFTTNLTEEEEKSKSLAKLKNKHETMISDLEERLRREEKQRQELEKTR 1050
Query: 232 RNLEKELLS--------EGESVVLELELGAMEDELKILIGKMRYRSSFGQNALQHSKEVA 283
R LE + + + L+L+L E+EL+ + + ++ AL+ +E+
Sbjct: 1051 RKLEGDSTDLHDQIAELQAQIAELKLQLAKKEEELQAALARAEEEAAQKNLALKKIRELE 1110
Query: 284 LLAGLIAEQLGGDKKLARRA 303
G + E L ++ +A
Sbjct: 1111 SQIGELQEDLESERAARNKA 1130
>pir||S49550 M-like protein emmL9 - Streptococcus pyogenes (strain 71-683)
emb|CAA51281.1| (X72752) M-type 9 protein [Streptococcus pyogenes]
Length = 384
Score = 42.7 bits (99), Expect = 0.009
Identities = 35/121 (28%), Positives = 69/121 (56%), Gaps = 12/121 (9%)
Query: 20 DKKEAHLKHLEAQHKEFVRDEKRYLEK--EKKELEKERQILEQEKENFKKQRAVCKESQA 77
++++ +L+ LE Q+K + +KRY E+ ++++LE E+QI E +++ + +E++
Sbjct: 120 EERQKNLEELERQNKREI--DKRYKEQLHKQQQLETEKQISEASRKSLSRDLEASREAK- 176
Query: 78 KALDAMLNYMAYTKDEIKSMILEQLEEELEAQKSALIRRYEKEAKEEGKKKSYAILAEAT 137
K ++A L + E + L++ ++ +A + +L R + EA E KKK A LA T
Sbjct: 177 KKVEADLAAL-----EAEHQKLKEEKQISDASRQSLSR--DLEASREAKKKVEADLAALT 229
Query: 138 A 138
A
Sbjct: 230 A 230
>emb|CAC01956.2| (AL390114) probable hypothetical 22.1 Kd protein [Leishmania major]
Length = 989
Score = 42.7 bits (99), Expect = 0.009
Identities = 28/103 (27%), Positives = 55/103 (53%), Gaps = 5/103 (4%)
Query: 11 RIWQLQTHFDKKEAHLKHLEAQHKEFVRDEKRYLEKEKKELEKERQILEQEKENFKKQRA 70
R+ L+ +++ LK + Q + + DE +++ +KE+ L QE E F + A
Sbjct: 480 RLETLRNDMEREAEELKQTQKQQLQRMHDE---FTEQRSAHQKEQ--LSQEHERFMETLA 534
Query: 71 VCKESQAKALDAMLNYMAYTKDEIKSMILEQLEEELEAQKSAL 113
+ SQAK L+A+ + E + I+++L +E E+++S+L
Sbjct: 535 EIRASQAKELEALKQQLKEKAQEELNAIMQELMKEKESRRSSL 577
>pir||S05515 myosin heavy chain, skeletal muscle - chicken (fragment)
Length = 429
Score = 42.7 bits (99), Expect = 0.009
Identities = 58/249 (23%), Positives = 112/249 (44%), Gaps = 22/249 (8%)
Query: 20 DKKEAHLKHLEAQHKEFVRDEKRYLEKEKKELEKERQILEQEKENFKKQRAVCKESQAKA 79
+K+ A++K + E ++E E ++KELE++ +L QEK + + Q +S A A
Sbjct: 7 EKEMANMK----EEFEKTKEELAKSEAKRKELEEKMVVLLQEKNDLQLQVQAEADSLADA 62
Query: 80 LDAMLNYMAYTKDEIKSMILE-----QLEEELEAQKSALIRRYEKEAKEEGKKKSYAILA 134
+ + + TK ++++ I E + EEE+ A+ +A R+ E E E K L
Sbjct: 63 -EERQDQLIKTKIQLEAKIKEVTERAEDEEEINAELTAKKRKLEDECSELKKDIDDLELT 121
Query: 135 EATA---RFAGNYAAENLTTRIALPCSDYIGRVIGKDGKNIEAFKKVSGVDIEFSEDSSE 191
A + A +NLT +A+ D + K+ K ++ + + D++ ED
Sbjct: 122 LAKVEKEKHATENKVKNLTEEMAV--LDETIAKLTKEKKALQEAHQQTLDDLQVEEDKVN 179
Query: 192 LCLSSFNLYRREVASETLKILIEDGRIQPNRIEEVYHRVARNLEKELLSEGESVV-LELE 250
+ ++V +E Q ++ R R LE +L +S++ LE +
Sbjct: 180 TLTKAKTKLEQQVDD------LEGSLEQEKKLRMDLERAKRKLEGDLKLAHDSIMDLEND 233
Query: 251 LGAMEDELK 259
++++LK
Sbjct: 234 KQQLDEKLK 242
>ref|NP_586080.1| (NC_003234) similarity to ribosomal protein L5 [Encephalitozoon
cuniculi]
emb|CAD25684.1| (AL590447) similarity to ribosomal protein L5 [Encephalitozoon
cuniculi]
Length = 901
Score = 42.7 bits (99), Expect = 0.009
Identities = 33/117 (28%), Positives = 63/117 (53%), Gaps = 5/117 (4%)
Query: 16 QTHFDKKEAHLKHLEAQHKEFVRD-EKRYLEKEKKELEKERQILEQEKENFKKQRAVCKE 74
+ + KKE K E Q +E + E++ +EK+K++ EK + +Q++E +KQ+ KE
Sbjct: 123 EANAQKKEEKAKKAEQQKEEKTKKAEQQKVEKQKQKEEKAEKQKQQKEEKAEKQKQQ-KE 181
Query: 75 SQAKALDAMLNYMAYTKDEIKSMILEQLEEELEAQ---KSALIRRYEKEAKEEGKKK 128
+AK + A ++ K +Q EE+ E Q K ++ E++A+++ +KK
Sbjct: 182 EKAKKAEQQKGEKAKKAEQQKGEKQKQKEEKTEKQEQKKGEKQKQKEEKAEKQEQKK 238
>pir||S03166 myosin heavy chain, gizzard smooth muscle [similarity] - chicken
emb|CAA29793.1| (X06546) MHC (AA 1-1979) [Gallus gallus]
Length = 1979
Score = 42.7 bits (99), Expect = 0.009
Identities = 73/326 (22%), Positives = 148/326 (45%), Gaps = 41/326 (12%)
Query: 6 AIWKTRIWQLQTHFDKKEAHLK------HLEAQHKEFVRDEKRY--LEKEKKELEKERQI 57
A K R WQ F K + L+ ++A+ +E R ++R E E KELE++
Sbjct: 831 AYLKLRNWQWWRLFTKVKPLLQVTRQEEEMQAKDEELQRTKERQQKAEAELKELEQKHTQ 890
Query: 58 LEQEKENFKKQRAVCKESQAKALDAMLNYMAYTKDEIKSMILE---QLEEE------LEA 108
L +EK +++ E A+A + M +A K E++ ++ E ++EEE L+A
Sbjct: 891 LCEEKNLLQEKLQAETELYAEA-EEMRVRLAAKKQELEEILHEMEARIEEEEERSQQLQA 949
Query: 109 QKSALIRRY---EKEAKEEGKKKSYAILAEATARFAGNYAAENLTTRIALPCSDYIGRVI 165
+K + ++ E++ +EE + L + TA +++ L D ++
Sbjct: 950 EKKKMQQQMLDLEEQLEEEEAARQKLQLEKVTADGKIKKMEDDI-----LIMEDQNNKLT 1004
Query: 166 GKDGKNIEAFKKVSGVDIEFSEDSSELCLSSFNLYRREVASETLKILIEDGRIQPNRIEE 225
K+ K +E ++VS + +E+ + + NL + + E++ +E + + +
Sbjct: 1005 -KERKLLE--ERVSDLTTNLAEEEEK----AKNLTKLKNKHESMISELEVRLKKEEKSRQ 1057
Query: 226 VYHRVARNLE------KELLSEGESVVLEL--ELGAMEDELKILIGKMRYRSSFGQNALQ 277
++ R LE E ++E ++ + EL +L E+EL+ + ++ +S NAL+
Sbjct: 1058 ELEKIKRKLEGESSDLHEQIAELQAQIAELKAQLAKKEEELQAALARLEDETSQKNNALK 1117
Query: 278 HSKEVALLAGLIAEQLGGDKKLARRA 303
+E+ + E L +K +A
Sbjct: 1118 KIRELESHISDLQEDLESEKAARNKA 1143
>ref|NP_005954.2| (NM_005963) myosin, heavy polypeptide 1, skeletal muscle, adult;
myosin heavy chain IIx/d [Homo sapiens]
sp|P12882|MYH1_HUMAN Myosin heavy chain, skeletal muscle, adult 1 (Myosin heavy chain
IIx/d) (MyHC-IIx/d)
gb|AAD29951.1| (AF111785) myosin heavy chain IIx/d [Homo sapiens]
Length = 1939
Score = 42.7 bits (99), Expect = 0.009
Identities = 68/300 (22%), Positives = 127/300 (41%), Gaps = 29/300 (9%)
Query: 20 DKKEAHLKHLEAQHKEFVRDEKRYLEKEKKELEKERQILEQEKENFKKQRAVCKESQAKA 79
+K+ A++K + E ++E E ++KELE++ L QEK + + Q +S A A
Sbjct: 850 EKEMANMK----EEFEKTKEELAKTEAKRKELEEKMVTLMQEKNDLQLQVQAEADSLADA 905
Query: 80 LDAMLNYMAYTKDEIKSMILE-----QLEEELEAQKSALIRRYEKEAKEEGKKKSYAILA 134
+ + + TK ++++ I E + EEE+ A+ +A R+ E E E K L
Sbjct: 906 -EERCDQLIKTKIQLEAKIKEVTERAEDEEEINAELTAKKRKLEDECSELKKDIDDLELT 964
Query: 135 EATA---RFAGNYAAENLTTRIALPCSDYIGRVIGKDGKNIEAFKKVSGVDIEFSEDSSE 191
A + A +NLT +A + I + + K+ K ++ + + D++ ED
Sbjct: 965 LAKVEKEKHATENKVKNLTEEMA-GLDETIAK-LTKEKKALQEAHQQTLDDLQAEEDKVN 1022
Query: 192 LCLSSFNLYRREVASETLKILIEDGRIQPNRIEEVYHRVARNLEKELLSEGESVV----- 246
L + ++ E +E Q +I R R LE +L ES +
Sbjct: 1023 ------TLTKAKIKLEQQVDDLEGSLEQEKKIRMDLERAKRKLEGDLKLAQESAMDIEND 1076
Query: 247 ---LELELGAMEDELKILIGKMRYRSSFGQNALQHSKEVALLAGLIAEQLGGDKKLARRA 303
L+ +L E E+ L K+ + G + KE+ + E++ ++ +A
Sbjct: 1077 KQQLDEKLKKKEFEMSGLQSKIEDEQALGMQLQKKIKELQARIEELEEEIEAERASRAKA 1136
>ref|NP_178048.1| (NM_106578) hypothetical protein [Arabidopsis thaliana]
Length = 2111
Score = 42.7 bits (99), Expect = 0.009
Identities = 62/307 (20%), Positives = 119/307 (38%), Gaps = 44/307 (14%)
Query: 9 KTRIWQLQTHFDKKEAHLKH-----LEAQHKEFVRDE-----KRYLEKEKKELEKERQIL 58
K + QL+ K+AH + LE Q+K + ++ K+ L + +K L+ +Q
Sbjct: 1381 KDEVRQLEEKLKAKDAHAEDCKKVLLEKQNKISLLEKELTNCKKDLSEREKRLDDAQQAQ 1440
Query: 59 EQEKENFKKQRAVCKESQAKALDAMLNYMAYTKDEIKSMILEQLEEELEAQKSALIRRYE 118
+ F KQ+ ++++ + Y K++ +EL Q +L ++ E
Sbjct: 1441 ATMQSEFNKQKQELEKNKKIHYTLNMTKRKYEKEK----------DELSKQNQSLAKQLE 1490
Query: 119 KEAKEEGKKKSYAILAEATARFAGNYAAENLTTRIALPCSDYIGRVIGKDGKNIEAFKKV 178
+ +E GK+ + + E + + E RI + Y+ ++ + K E KK
Sbjct: 1491 EAKEEAGKRTTTDAVVEQSVK-----EREEKEKRIQI-LDKYVHQLKDEVRKKTEDLKK- 1543
Query: 179 SGVDIEFSEDSSELCLSSFNLYRREVASETLKILIEDGRIQPNRIE-EVYHRVARNLEKE 237
D E +++ SE +EV KI E ++ + E Y +L +E
Sbjct: 1544 --KDEELTKERSER-----KSVEKEVGDSLTKIKKEKTKVDEELAKLERYQTALTHLSEE 1596
Query: 238 L---------LSEGESVVLELELGAMEDELKILIGKMRYRSSFGQNALQHSKEVALLAGL 288
L L EG S V L + D+ + + Y ++ +S+ +
Sbjct: 1597 LEKLKHADGNLPEGTSAVQVLSGSILNDQAAAYVSAVEYFERVARSIASNSQVSTKPTDM 1656
Query: 289 IAEQLGG 295
+ E G
Sbjct: 1657 VTEPSSG 1663
>sp|P13816|GARP_PLAFF GLUTAMIC ACID-RICH PROTEIN PRECURSOR
pir||A54514 glutamic acid-rich protein precursor - malaria parasite
(Plasmodium falciparum)
gb|AAA29605.1| (J03998) glutamic acid-rich protein [Plasmodium falciparum]
Length = 678
Score = 42.7 bits (99), Expect = 0.009
Identities = 35/114 (30%), Positives = 58/114 (50%), Gaps = 10/114 (8%)
Query: 16 QTHFDKKEAHLKHLEAQHKEFVRDEKRYLEKEKKEL-EKERQILEQEKENFKKQRAVCKE 74
+T D K+ +++ KE + E+ +KKE +KE+++ EQEK KK++ KE
Sbjct: 230 ETSNDTKDNDKENISEDKKEDHQQEEMLKTLDKKERKQKEKEMKEQEKIEKKKKKQEEKE 289
Query: 75 SQAKALDAMLNYMAYTKDEIKSMILEQLEEELEAQKSALIRRYEKEAKEEGKKK 128
+ + + K E K +Q E+E++ QK R +KE KE+ KKK
Sbjct: 290 KKKQEKER-------KKQEKKER--KQKEKEMKKQKKIEKERKKKEEKEKKKKK 334
>ref|NP_602741.1| (NC_003454) ClpB protein [Fusobacterium nucleatum subsp. nucleatum
ATCC 25586]
gb|AAL94040.1| (AE010496) ClpB protein [Fusobacterium nucleatum subsp. nucleatum
ATCC 25586]
Length = 864
Score = 42.7 bits (99), Expect = 0.009
Identities = 47/170 (27%), Positives = 82/170 (47%), Gaps = 21/170 (12%)
Query: 23 EAHLKHLEAQHKEFVRDEKRYLEKEKKELEKERQIL----EQEKENFKKQRAVCKESQAK 78
E +K LE + + ++ + +EKE EL +E+++L E EKE+ K + + +E +
Sbjct: 428 EIEIKALEKETDDASKERLKVIEKELAELNEEKKVLTSKWELEKEDISKIKNIKREIENV 487
Query: 79 ALD---AMLNYMAYTKDEIKSMILEQLEEELEAQKSALIRRYEKEAKEEGKKKSYAI--- 132
L+ A Y E+K L LE+EL+ Q++ + +K+ KE K
Sbjct: 488 KLEMEKAEREYDLTKLSELKYGKLATLEKELQEQQN----KVDKDGKENSLLKQEVTADE 543
Query: 133 LAEATARFAGNYAAENLTTR--IALPCSDYI-GRVIGKDGKNIEAFKKVS 179
+A+ +R+ G ++ T+ L D+I RV G+D EA K V+
Sbjct: 544 IADIVSRWTGIPVSKLTETKKEKMLHLEDHIKERVKGQD----EAIKSVA 589
>ref|XP_052590.1| (XM_052590) similar to Myosin heavy chain, skeletal muscle, adult 1
(Myosin heavy chain IIx/d) (MyHC-IIx/d) [Homo sapiens]
Length = 1939
Score = 42.7 bits (99), Expect = 0.009
Identities = 68/300 (22%), Positives = 127/300 (41%), Gaps = 29/300 (9%)
Query: 20 DKKEAHLKHLEAQHKEFVRDEKRYLEKEKKELEKERQILEQEKENFKKQRAVCKESQAKA 79
+K+ A++K + E ++E E ++KELE++ L QEK + + Q +S A A
Sbjct: 850 EKEMANMK----EEFEKTKEELAKTEAKRKELEEKMVTLMQEKNDLQLQVQAEADSLADA 905
Query: 80 LDAMLNYMAYTKDEIKSMILE-----QLEEELEAQKSALIRRYEKEAKEEGKKKSYAILA 134
+ + + TK ++++ I E + EEE+ A+ +A R+ E E E K L
Sbjct: 906 -EERCDQLIKTKIQLEAKIKEVTERAEDEEEINAELTAKKRKLEDECSELKKDIDDLELT 964
Query: 135 EATA---RFAGNYAAENLTTRIALPCSDYIGRVIGKDGKNIEAFKKVSGVDIEFSEDSSE 191
A + A +NLT +A + I + + K+ K ++ + + D++ ED
Sbjct: 965 LAKVEKEKHATENKVKNLTEEMA-GLDETIAK-LTKEKKALQEAHQQTLDDLQAEEDKVN 1022
Query: 192 LCLSSFNLYRREVASETLKILIEDGRIQPNRIEEVYHRVARNLEKELLSEGESVV----- 246
L + ++ E +E Q +I R R LE +L ES +
Sbjct: 1023 ------TLTKAKIKLEQQVDDLEGSLEQEKKIRMDLERAKRKLEGDLKLAQESTMDIEND 1076
Query: 247 ---LELELGAMEDELKILIGKMRYRSSFGQNALQHSKEVALLAGLIAEQLGGDKKLARRA 303
L+ +L E E+ L K+ + G + KE+ + E++ ++ +A
Sbjct: 1077 KQQLDEKLKKKEFEMSGLQSKIEDEQALGMQLQKKIKELQARIEELEEEIEAERASRAKA 1136
>ref|NP_213137.1| (NC_000918) putative protein [Aquifex aeolicus]
pir||E70318 hypothetical protein aq_197 - Aquifex aeolicus
gb|AAC06533.1| (AE000677) putative protein [Aquifex aeolicus]
Length = 400
Score = 42.7 bits (99), Expect = 0.009
Identities = 38/139 (27%), Positives = 63/139 (44%), Gaps = 16/139 (11%)
Query: 20 DKKEAHLKHLEAQHKEFVRDEKRYLEKEKKELEKERQIL---------EQEKENFKKQRA 70
+KKE + L+ + +E ++ K+ EKE+K LE R++ E ++ K+ R
Sbjct: 174 EKKEKEVNKLKEKLRELEKNLKKQKEKEEKLLESNRKLFQLLELLGRKEDKRRGSKEVRE 233
Query: 71 VCKE-----SQAKALDAMLNYMAYTKDEIKSMILEQLEEELEAQKSALIRRY-EKEAKEE 124
+ KE + L +L + +E+K LE+L+ ELE K + + EKE +
Sbjct: 234 LRKERKKLVKEVLELQDLLEIYSRENEELKKE-LEKLKSELEGAKKEIAKLLTEKENLSK 292
Query: 125 GKKKSYAILAEATARFAGN 143
KK I E F N
Sbjct: 293 AVKKKEEIYEEVLRVFLPN 311
>sp|P10587|MYHB_CHICK Myosin heavy chain, gizzard smooth muscle
Length = 1979
Score = 42.7 bits (99), Expect = 0.009
Identities = 73/326 (22%), Positives = 148/326 (45%), Gaps = 41/326 (12%)
Query: 6 AIWKTRIWQLQTHFDKKEAHLK------HLEAQHKEFVRDEKRY--LEKEKKELEKERQI 57
A K R WQ F K + L+ ++A+ +E R ++R E E KELE++
Sbjct: 831 AYLKLRNWQWWRLFTKVKPLLQVTRQEEEMQAKDEELQRTKERQQKAEAELKELEQKHTQ 890
Query: 58 LEQEKENFKKQRAVCKESQAKALDAMLNYMAYTKDEIKSMILE---QLEEE------LEA 108
L +EK +++ E A+A + M +A K E++ ++ E ++EEE L+A
Sbjct: 891 LCEEKNLLQEKLQAETELYAEA-EEMRVRLAAKKQELEEILHEMEARIEEEEERSQQLQA 949
Query: 109 QKSALIRRY---EKEAKEEGKKKSYAILAEATARFAGNYAAENLTTRIALPCSDYIGRVI 165
+K + ++ E++ +EE + L + TA +++ L D ++
Sbjct: 950 EKKKMQQQMLDLEEQLEEEEAARQKLQLEKVTADGKIKKMEDDI-----LIMEDQNNKLT 1004
Query: 166 GKDGKNIEAFKKVSGVDIEFSEDSSELCLSSFNLYRREVASETLKILIEDGRIQPNRIEE 225
K+ K +E ++VS + +E+ + + NL + + E++ +E + + +
Sbjct: 1005 -KERKLLE--ERVSDLTTNLAEEEEK----AKNLTKLKNKHESMISELEVRLKKEEKSRQ 1057
Query: 226 VYHRVARNLE------KELLSEGESVVLEL--ELGAMEDELKILIGKMRYRSSFGQNALQ 277
++ R LE E ++E ++ + EL +L E+EL+ + ++ +S NAL+
Sbjct: 1058 ELEKIKRKLEGESSDLHEQIAELQAQIAELKAQLAKKEEELQAALARLEDETSQKNNALK 1117
Query: 278 HSKEVALLAGLIAEQLGGDKKLARRA 303
+E+ + E L +K +A
Sbjct: 1118 KIRELESHISDLQEDLESEKAARNKA 1143
Database: /home/scwang/download_20020708_db/nr
Posted date: Aug 7, 2002 12:55 PM
Number of letters in database: 324,149,939
Number of sequences in database: 1,026,957
Lambda K H
0.314 0.131 0.352
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 264,670,959
Number of Sequences: 1026957
Number of extensions: 10823617
Number of successful extensions: 78359
Number of sequences better than 1.0e-02: 130
Number of HSP's better than 0.0 without gapping: 31
Number of HSP's successfully gapped in prelim test: 111
Number of HSP's that attempted gapping in prelim test: 76402
Number of HSP's gapped (non-prelim): 835
length of query: 462
length of database: 324,149,939
effective HSP length: 125
effective length of query: 337
effective length of database: 195,780,314
effective search space: 65977965818
effective search space used: 65977965818
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 99 (42.7 bits)