BLASTP 2.2.1 [Apr-13-2001]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|15645392|ref|NP_207566.1| hypothetical protein
[Helicobacter pylori 26695]
(363 letters)
Database: /home/scwang/download_20020708_db/nr
1,026,957 sequences; 324,149,939 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_207566.1| (NC_000915) hypothetical protein [Helicoba... 733 0.0
ref|NP_223428.1| (NC_000921) putative [Helicobacter pylori ... 727 0.0
ref|NP_282417.1| (NC_002163) hypothetical protein Cj1270c [... 475 e-133
ref|NP_603561.1| (NC_003454) 2-nitropropane dioxygenase [Fu... 411 e-114
ref|NP_561908.1| (NC_003366) conserved hypothetical protein... 249 5e-65
ref|NP_350163.1| (NC_003030) Dioxygenase related to 2-nitro... 249 5e-65
ref|NP_487781.1| (NC_003272) hypothetical protein [Nostoc s... 224 2e-57
ref|NP_213109.1| (NC_000918) putative protein [Aquifex aeol... 179 3e-44
ref|NP_518235.1| (NC_003295) CONSERVED HYPOTHETICAL PROTEIN... 162 7e-39
ref|NP_284382.1| (NC_003116) hypothetical protein [Neisseri... 148 1e-34
ref|NP_274463.1| (NC_003112) conserved hypothetical protein... 148 1e-34
ref|NP_350159.1| (NC_003030) Dioxygenase related to 2-nitro... 109 6e-23
ref|NP_603081.1| (NC_003454) Enoyl-[acyl-carrier-protein] r... 107 3e-22
ref|NP_623092.1| (NC_003869) Dioxygenases related to 2-nitr... 105 8e-22
ref|NP_661302.1| (NC_002932) conserved hypothetical protein... 98 2e-19
ref|NP_470152.1| (NC_003212) similar to oxidoreductases [Li... 95 1e-18
ref|NP_464341.1| (NC_003210) similar to oxidoreductases [Li... 91 2e-17
ref|NP_228609.1| (NC_000853) conserved hypothetical protein... 89 8e-17
ref|NP_267944.1| (NC_002662) 2-nitropropane deoxygenase (EC... 84 2e-15
ref|NP_269774.1| (NC_002737) putative trans-2-enoyl-ACP red... 84 2e-15
ref|NP_243505.1| (NC_002570) BH2639~unknown conserved prote... 82 1e-14
ref|NP_242071.1| (NC_002570) BH1205~unknown conserved prote... 81 2e-14
ref|NP_344942.1| (NC_003028) enoyl-(acyl-carrier-protein) r... 79 1e-13
ref|NP_357973.1| (NC_003098) Enoyl-acyl carrier protein(ACP... 79 1e-13
ref|NP_471605.1| (NC_003212) similar to unknown proteins [L... 74 2e-12
ref|NP_465694.1| (NC_003210) similar to unknown proteins [L... 74 3e-12
ref|NP_422173.1| (NC_002696) conserved hypothetical protein... 67 2e-10
ref|NP_070998.1| (NC_000917) 2-nitropropane dioxygenase (nc... 67 3e-10
ref|NP_241076.1| (NC_002570) BH02210~unknown conserved prot... 66 7e-10
ref|NP_420381.1| (NC_002696) conserved hypothetical protein... 65 2e-09
ref|NP_371444.1| (NC_002758) hypothetical protein [Staphylo... 64 2e-09
ref|NP_645620.1| (NC_003923) ORFID:MW0803~hypothetical prot... 64 2e-09
ref|NP_374042.1| (NC_002745) hypothetical protein, similar ... 64 2e-09
gb|AAG10471.1|AF279106_33 (AF279106) predicted 2-nitropropa... 62 1e-08
ref|NP_218070.1| (NC_000962) hypothetical protein Rv3553 [M... 60 4e-08
ref|NP_338203.1| (NC_002755) conserved hypothetical protein... 60 4e-08
gb|EAA02031.1| (AAAB01002180) ebiP355 [Anopheles gambiae st... 60 5e-08
ref|NP_641625.1| (NC_003919) 2-nitropropane dioxygenase [Xa... 58 1e-07
ref|NP_521868.1| (NC_003296) PROBABLE OXIDOREDUCTASE PROTEI... 57 3e-07
ref|NP_636571.1| (NC_003902) 2-nitropropane dioxygenase [Xa... 57 4e-07
gb|AAG02412.1| (AF284037) putative 2-nitropropane dioxygena... 55 2e-06
ref|NP_012683.1| (NC_001142) Hypothetical ORF; Yjr149wp [Sa... 54 3e-06
ref|NP_421784.1| (NC_002696) conserved hypothetical protein... 54 3e-06
ref|NP_626791.1| (NC_003888) putative oxidoreductase [Strep... 53 6e-06
ref|NP_655271.1| (NC_003995) NPD, 2-nitropropane dioxygenas... 53 6e-06
ref|NP_249715.1| (NC_002516) hypothetical protein [Pseudomo... 52 8e-06
ref|NP_568988.1| (NM_125821) 2-nitropropane dioxygenase-lik... 52 1e-05
dbj|BAB09856.1| (AB008268) 2-nitropropane dioxygenase-like ... 52 1e-05
ref|NP_216049.1| (NC_000962) hypothetical protein Rv1533 [M... 51 2e-05
ref|NP_390557.1| (NC_000964) similar to 2-nitropropane diox... 51 2e-05
pir||T49534 hypothetical protein B21J21.130 [imported] - Ne... 51 2e-05
emb|CAB91335.2| (AL355929) conserved hypothetical protein [... 51 2e-05
ref|NP_297414.1| (NC_002488) conserved hypothetical protein... 50 3e-05
ref|NP_252891.1| (NC_002516) hypothetical protein [Pseudomo... 50 3e-05
gb|AAG42399.1|AF300471_2 (AF300471) trans-2-enoyl-ACP reduc... 49 9e-05
ref|NP_217297.1| (NC_000962) hypothetical protein Rv2781c [... 47 3e-04
ref|NP_214535.1| (NC_000962) hypothetical protein Rv0021c [... 46 6e-04
gb|AAM45325.1| (AC117080) HYPOTHETICAL 38.7 KDA PROTEIN [Di... 45 0.001
gb|AAF13746.1|AF117351_3 (AF117351) unknown [Zymomonas mobi... 45 0.001
sp|Q12723|2NPD_WILMR 2-NITROPROPANE DIOXYGENASE (NITROALKAN... 45 0.001
ref|NP_600164.1| (NC_003450) COG2070:Dioxygenases related t... 44 0.002
ref|NP_216410.1| (NC_000962) hypothetical protein Rv1894c [... 43 0.005
>ref|NP_207566.1| (NC_000915) hypothetical protein [Helicobacter pylori 26695]
pir||E64616 hypothetical protein HP0773 - Helicobacter pylori (strain 26695)
gb|AAD07825.1| (AE000589) H. pylori predicted coding region HP0773 [Helicobacter
pylori 26695]
Length = 363
Score = 733 bits (1893), Expect = 0.0
Identities = 363/363 (100%), Positives = 363/363 (100%)
Query: 1 MVSTLKPLKIGKHTIKFPIFQGGMGVGISWDELAGNVAKEGALGVISAVGTGYYKNMRFV 60
MVSTLKPLKIGKHTIKFPIFQGGMGVGISWDELAGNVAKEGALGVISAVGTGYYKNMRFV
Sbjct: 1 MVSTLKPLKIGKHTIKFPIFQGGMGVGISWDELAGNVAKEGALGVISAVGTGYYKNMRFV 60
Query: 61 ERIVAKKPFEALNFYSKKALNEIFANARKICGNNPLGANILYAINDYGRVLRDSCEAGAN 120
ERIVAKKPFEALNFYSKKALNEIFANARKICGNNPLGANILYAINDYGRVLRDSCEAGAN
Sbjct: 61 ERIVAKKPFEALNFYSKKALNEIFANARKICGNNPLGANILYAINDYGRVLRDSCEAGAN 120
Query: 121 IIITGAGLPTNMPEFAKDFSDVALIPIISSAKALKILCKRWSDRYKRIPDAFIVEGPLSG 180
IIITGAGLPTNMPEFAKDFSDVALIPIISSAKALKILCKRWSDRYKRIPDAFIVEGPLSG
Sbjct: 121 IIITGAGLPTNMPEFAKDFSDVALIPIISSAKALKILCKRWSDRYKRIPDAFIVEGPLSG 180
Query: 181 GHQGFKYEDCFKEEFRLENLVPKVVEASKEWGNIPIIAAGGIWDRKDIDTMLSLGASGVQ 240
GHQGFKYEDCFKEEFRLENLVPKVVEASKEWGNIPIIAAGGIWDRKDIDTMLSLGASGVQ
Sbjct: 181 GHQGFKYEDCFKEEFRLENLVPKVVEASKEWGNIPIIAAGGIWDRKDIDTMLSLGASGVQ 240
Query: 241 MATRFLGTKECDAKVYADLLPTLKKEDILLIKSPVGYPARAINTGVIKRIEEGNAPKIAC 300
MATRFLGTKECDAKVYADLLPTLKKEDILLIKSPVGYPARAINTGVIKRIEEGNAPKIAC
Sbjct: 241 MATRFLGTKECDAKVYADLLPTLKKEDILLIKSPVGYPARAINTGVIKRIEEGNAPKIAC 300
Query: 301 VSNCVAPCNRGEEAKKVGYCIADGLGRSYLGNREEGLYFTGANGYRVDKIISVHELIKEL 360
VSNCVAPCNRGEEAKKVGYCIADGLGRSYLGNREEGLYFTGANGYRVDKIISVHELIKEL
Sbjct: 301 VSNCVAPCNRGEEAKKVGYCIADGLGRSYLGNREEGLYFTGANGYRVDKIISVHELIKEL 360
Query: 361 TEG 363
TEG
Sbjct: 361 TEG 363
>ref|NP_223428.1| (NC_000921) putative [Helicobacter pylori J99]
pir||A71898 hypothetical protein jhp0710 - Helicobacter pylori (strain J99)
gb|AAD06285.1| (AE001502) putative [Helicobacter pylori J99]
Length = 363
Score = 727 bits (1876), Expect = 0.0
Identities = 359/363 (98%), Positives = 361/363 (98%)
Query: 1 MVSTLKPLKIGKHTIKFPIFQGGMGVGISWDELAGNVAKEGALGVISAVGTGYYKNMRFV 60
MVSTLKPLKIGKHTIKFPIFQGGMGVGISWDELAGNVAKEGALGVISAVGTGYYKNMRFV
Sbjct: 1 MVSTLKPLKIGKHTIKFPIFQGGMGVGISWDELAGNVAKEGALGVISAVGTGYYKNMRFV 60
Query: 61 ERIVAKKPFEALNFYSKKALNEIFANARKICGNNPLGANILYAINDYGRVLRDSCEAGAN 120
ERIVAKKPFEALNFYSKKALNEIFANARKICGN PLGANILYAINDYGRVLRDSCEAGAN
Sbjct: 61 ERIVAKKPFEALNFYSKKALNEIFANARKICGNKPLGANILYAINDYGRVLRDSCEAGAN 120
Query: 121 IIITGAGLPTNMPEFAKDFSDVALIPIISSAKALKILCKRWSDRYKRIPDAFIVEGPLSG 180
IIITGAGLPTNMPEFAKDFSDVALIPIISSAKALKILCKRWSDRYKRIPDAFIVEGPLSG
Sbjct: 121 IIITGAGLPTNMPEFAKDFSDVALIPIISSAKALKILCKRWSDRYKRIPDAFIVEGPLSG 180
Query: 181 GHQGFKYEDCFKEEFRLENLVPKVVEASKEWGNIPIIAAGGIWDRKDIDTMLSLGASGVQ 240
GHQGFKYEDCFKEEF+LENLVPKVVEASKEWGNIPIIAAGGIWD+KDIDTMLSLGASGVQ
Sbjct: 181 GHQGFKYEDCFKEEFQLENLVPKVVEASKEWGNIPIIAAGGIWDKKDIDTMLSLGASGVQ 240
Query: 241 MATRFLGTKECDAKVYADLLPTLKKEDILLIKSPVGYPARAINTGVIKRIEEGNAPKIAC 300
MATRFLGTKECDAK YADLLPTLKKEDILLIKSPVGYPARAINTGVIKRIEEGNAPKIAC
Sbjct: 241 MATRFLGTKECDAKAYADLLPTLKKEDILLIKSPVGYPARAINTGVIKRIEEGNAPKIAC 300
Query: 301 VSNCVAPCNRGEEAKKVGYCIADGLGRSYLGNREEGLYFTGANGYRVDKIISVHELIKEL 360
VSNCVAPCNRGEEAKKVGYCIADGLGRSYLGNREEGLYFTGANGYRVDKIISVHELIKEL
Sbjct: 301 VSNCVAPCNRGEEAKKVGYCIADGLGRSYLGNREEGLYFTGANGYRVDKIISVHELIKEL 360
Query: 361 TEG 363
TEG
Sbjct: 361 TEG 363
>ref|NP_282417.1| (NC_002163) hypothetical protein Cj1270c [Campylobacter jejuni]
pir||H81334 hypothetical protein Cj1270c [imported] - Campylobacter jejuni
(strain NCTC 11168)
emb|CAB73524.1| (AL139077) hypothetical protein Cj1270c [Campylobacter jejuni]
Length = 363
Score = 475 bits (1222), Expect = e-133
Identities = 220/360 (61%), Positives = 280/360 (77%), Gaps = 1/360 (0%)
Query: 5 LKPLKIGKHTIKFPIFQGGMGVGISWDELAGNVAKEGALGVISAVGTGYYKNMRFVERIV 64
L+PL+IGKHTIK+PIFQGGMG+GISWD LA V+ G LG+IS+VGTGYY+ ++ + +
Sbjct: 3 LQPLQIGKHTIKYPIFQGGMGLGISWDRLASAVSLNGGLGIISSVGTGYYEERKYASKEL 62
Query: 65 AKKPFEALNFYSKKALNEIFANARKICGNNPLGANILYAINDYGRVLRDSCEAGANIIIT 124
KP+ + NFYS+K L + NARK+CG+ PLG NIL A NDY R+ RD+CE G N+I++
Sbjct: 63 NAKPYGSENFYSRKGLQALINNARKVCGDAPLGCNILCASNDYARIARDACEVGFNVIVS 122
Query: 125 GAGLPTNMPEFAKDFSDVALIPIISSAKALKILCKRWSDRYKRIPDAFIVEGPLSGGHQG 184
GAGLPTN+PEF DF DVAL+PIISSAKALKI+CKRW RY R+PDA ++EGP SGGHQG
Sbjct: 123 GAGLPTNLPEFTADFPDVALVPIISSAKALKIICKRWQSRYNRLPDAVVLEGPKSGGHQG 182
Query: 185 FKYEDCFKEEFRLENLVPKVVEASKEWGNIPIIAAGGIWDRKDIDTMLSLGASGVQMATR 244
F YE C ++LE L+ VVE +K WG+ P+IAAGGIWD+KDI+ +SLGASGVQM TR
Sbjct: 183 FTYEQCLDPNYQLEKLIAPVVEEAKNWGSFPVIAAGGIWDKKDIENAISLGASGVQMGTR 242
Query: 245 FLGTKECDA-KVYADLLPTLKKEDILLIKSPVGYPARAINTGVIKRIEEGNAPKIACVSN 303
F+GT ECDA + + +L K+EDI LIKSPVGYPAR + T ++ +++ PKI C+SN
Sbjct: 243 FIGTFECDASEEFKSVLLASKEEDIELIKSPVGYPARGVRTNLLNLVDKRMGPKINCISN 302
Query: 304 CVAPCNRGEEAKKVGYCIADGLGRSYLGNREEGLYFTGANGYRVDKIISVHELIKELTEG 363
CVAPC RG+EA KVGYCIAD L ++ G +E GL+FTGANGYR+DK+ISV EL+++L G
Sbjct: 303 CVAPCGRGKEATKVGYCIADRLFDAWSGKKETGLFFTGANGYRLDKLISVKELMEKLVNG 362
>ref|NP_603561.1| (NC_003454) 2-nitropropane dioxygenase [Fusobacterium nucleatum
subsp. nucleatum ATCC 25586]
gb|AAL94860.1| (AE010577) 2-nitropropane dioxygenase [Fusobacterium nucleatum
subsp. nucleatum ATCC 25586]
Length = 382
Score = 411 bits (1056), Expect = e-114
Identities = 195/357 (54%), Positives = 266/357 (73%), Gaps = 3/357 (0%)
Query: 5 LKPLKIGKHTIKFPIFQGGMGVGISWDELAGNVAKEGALGVISAVGTGYYKNMRFVERIV 64
LK +KIGK+ I+ PI QGGMGVG+SWD+LAG V+K G LG IS + TGYY N+++ +++V
Sbjct: 4 LKGIKIGKYYIEKPIVQGGMGVGVSWDQLAGTVSKNGGLGTISGICTGYYDNLKYCKKVV 63
Query: 65 AKKPFEALNFYSKKALNEIFANARKICGNNPLGANILYAINDYGRVLRDSCEAGANIIIT 124
+P A S++A+ E+F NARKICG+ PL NIL+A+NDY +++ + EAGANII+T
Sbjct: 64 NGRPIGADALNSREAMIELFKNARKICGDKPLACNILHALNDYSKIVEYALEAGANIIVT 123
Query: 125 GAGLPTNMPEFAKDFSDVALIPIISSAKALKILCKRWSDRYKRIPDAFIVEGPLSGGHQG 184
GAGLP +P+ + + DVA++PI+SS +ALKI+CK+W R+PDA IVEGP SGGHQG
Sbjct: 124 GAGLPLELPKLVESYPDVAIVPIVSSGRALKIICKKW-QAAGRLPDAVIVEGPKSGGHQG 182
Query: 185 FKYEDCFKEEFRLENLVPKVVEASKEWGNIPIIAAGGIWDRKDIDTMLSLGASGVQMATR 244
K +D F E +LE++VP+V E +WG+ PIIAAGGIWD DI +++LGA VQ+ TR
Sbjct: 183 VKADDLFIPEHQLESIVPEVKEERDKWGDFPIIAAGGIWDNDDIQKIMALGADAVQLGTR 242
Query: 245 FLGTKECDA-KVYADLLPTLKKEDILLIKSPVGYPARAINTGVIKRIEEGNAPKIACVSN 303
F+GT ECDA + + ++L KKEDI+++KSPVGYP RA+ T +IK + + P I C SN
Sbjct: 243 FIGTYECDASEEFKNILINAKKEDIVIVKSPVGYPGRAVKTNLIKNLTH-DTPTIKCYSN 301
Query: 304 CVAPCNRGEEAKKVGYCIADGLGRSYLGNREEGLYFTGANGYRVDKIISVHELIKEL 360
CV PCN GEEA+KVG+CIA+ L SY G + GL+F+G NGYR++K++SV +LI EL
Sbjct: 302 CVTPCNLGEEARKVGFCIANCLSDSYNGKVDTGLFFSGENGYRIEKLVSVEDLINEL 358
>ref|NP_561908.1| (NC_003366) conserved hypothetical protein [Clostridium
perfringens]
dbj|BAB80698.1| (AP003188) conserved hypothetical protein [Clostridium perfringens]
Length = 355
Score = 249 bits (635), Expect = 5e-65
Identities = 140/362 (38%), Positives = 209/362 (57%), Gaps = 22/362 (6%)
Query: 5 LKPLKIGKHTIKFPIFQGGMGVGISWDELAGNVAKEGALGVISAVGTGYYKNMRFVERIV 64
+KPL IG T + PI QGGMG+G+S LA V K G +G+IS GY +E
Sbjct: 3 IKPLTIGNLTARLPIIQGGMGIGVSLSNLASAVTKAGGIGIISGAQPGY------LEEDF 56
Query: 65 AKKPFEALNFYSKKALNEIFANARKICGNNPLGANILYAINDYGRVLRDSCEAGANIIIT 124
P EA + +AL + A++ N +G N++ A+N+Y ++ + ++G ++II+
Sbjct: 57 KNNPLEA----NLRALKKHIRIAKEKSQNGIIGVNLMVAMNNYAEHVKAAIDSGVDLIIS 112
Query: 125 GAGLPTNMPEFAKDFSDVALIPIISSAKALKILCKRWSDRYKRIPDAFIVEGPLSGGHQG 184
GAGLP+++P+F K S+V + PI+SS KA K++ K W +K PD ++EGP +GGH G
Sbjct: 113 GAGLPSHLPKFTKG-SNVKIAPIVSSLKAAKVILKLWDRHHKVSPDMIVIEGPKAGGHLG 171
Query: 185 FKYEDCFKEEFRLENLVPKVVEASKEWGN-----IPIIAAGGIWDRKDIDTMLSLGASGV 239
F E E + ++ + +++ + + + IPII AGGI+D KDI L LGASGV
Sbjct: 172 FTKESLEDESKKFDSTILDIIKETSIYEDKYEKKIPIIVAGGIFDGKDIAKYLKLGASGV 231
Query: 240 QMATRFLGTKECDAKV-YADLLPTLKKEDILLIKSPVGYPARAINTGVIKRIEEGNAPKI 298
QMATRF+ T ECDA + + + KE I ++KSPVG P RAI + + E K+
Sbjct: 232 QMATRFVATYECDANIKFKEAYINCNKESISIVKSPVGMPGRAIRNSFV-QFTETEKSKV 290
Query: 299 ACVSNCVAPCNRGEEAKKVGYCIADGLGRSYLGNREEGLYFTGANGYRVDKIISVHELIK 358
+ NC+ PCN + YCI+ L + G+ + GL F G N ++DKI+SV L+
Sbjct: 291 SHCYNCLIPCNPAD----TPYCISQALINAVKGDIDNGLIFCGENASKIDKIVSVETLMN 346
Query: 359 EL 360
EL
Sbjct: 347 EL 348
>ref|NP_350163.1| (NC_003030) Dioxygenase related to 2-nitropropane dioxygenase
[Clostridium acetobutylicum]
gb|AAK81503.1|AE007854_10 (AE007854) Dioxygenase related to 2-nitropropane dioxygenase
[Clostridium acetobutylicum]
Length = 355
Score = 249 bits (635), Expect = 5e-65
Identities = 146/363 (40%), Positives = 207/363 (56%), Gaps = 25/363 (6%)
Query: 5 LKPLKIGKHTIKFPIFQGGMGVGISWDELAGNVAKEGALGVISAVGTGYYKNMRFVERIV 64
L PL+IG PI QGGMGVGIS LA VA G +G IS V G+
Sbjct: 3 LPPLQIGDLKADIPIIQGGMGVGISRSSLASAVANCGGVGTISGVQIGF----------- 51
Query: 65 AKKPFEALNFYSK-KALNEIFANARKICGNNPLGANILYAINDYGRVLRDSCEAGANIII 123
+ FE F + +ALN+ A++ + N + A+NDY + ++ + +AGA++I+
Sbjct: 52 DEPDFETNTFNANIRALNKHIKKAKQESKRGIIAVNFMVAMNDYDKYVKSAVDAGADLIV 111
Query: 124 TGAGLPTNMPEFAKDFSDVALIPIISSAKALKILCKRWSDRYKRIPDAFIVEGPLSGGHQ 183
+GAGLPT +P+ + S V + PI+SS KA ++CK W + RIPD +VEGP +GGH
Sbjct: 112 SGAGLPTALPKIVEG-SKVKIAPIVSSPKAASVICKMWDKHHGRIPDLIVVEGPEAGGHL 170
Query: 184 GFKYEDCFKEEFRLENLVPKVVEASKEWG-----NIPIIAAGGIWDRKDIDTMLSLGASG 238
GFK E L +++ V+ A K + IP++ GG++ KDI + LGASG
Sbjct: 171 GFKAEQVKGSHEELSDILTGVLTAIKPFEEKHGVKIPVVCGGGVFYGKDIAKYIKLGASG 230
Query: 239 VQMATRFLGTKECDAKV-YADLLPTLKKEDILLIKSPVGYPARAINTGVIKRIEEGNAPK 297
VQMATRF+ T+ECDA + Y ++ K++DI ++KSPVG P RAI+ ++ + N
Sbjct: 231 VQMATRFIATEECDANLNYKNVYVNCKEDDIKIVKSPVGMPGRAISNKFVQS-NDKNITI 289
Query: 298 IACVSNCVAPCNRGEEAKKVGYCIADGLGRSYLGNREEGLYFTGANGYRVDKIISVHELI 357
C NC+ PCN K YCI+ L + GN +E L FTGA Y++DKI+ V ELI
Sbjct: 290 TKCY-NCLKPCN----PKDTPYCISKALINAVNGNVDEALLFTGAKSYKIDKIVKVKELI 344
Query: 358 KEL 360
EL
Sbjct: 345 NEL 347
>ref|NP_487781.1| (NC_003272) hypothetical protein [Nostoc sp. PCC 7120]
dbj|BAB75440.1| (AP003594) ORF_ID:all3741~hypothetical protein [Nostoc sp. PCC
7120]
Length = 377
Score = 224 bits (570), Expect = 2e-57
Identities = 140/370 (37%), Positives = 212/370 (56%), Gaps = 20/370 (5%)
Query: 5 LKPLKIGKHTIKFPIFQGGMGVGISWDELAGNVAKEGALGVISAVGTGYYKNMRFVERIV 64
L+PL+IGKH + PI QG M V +S +LAG VA G +GVI+++G G + F +R
Sbjct: 10 LQPLRIGKHIARHPIIQGAMAVRVSGAKLAGAVANAGGVGVIASLGLGL-DSPYFDKR-- 66
Query: 65 AKKPFEALNFYSKKALNEIFANARKICGNNPLGANILYAINDYGRVLRDSCEAGANIIIT 124
K+ F N + AL + A AR I + +G NIL A DY + + + GA+IIIT
Sbjct: 67 KKRSFFTAN---RLALIDELAAARSISPDGVIGVNILVATKDYSVLAQTAAAQGADIIIT 123
Query: 125 GAGLPTNMPEFAKDFSDVALIPIISSAKALKILCKRWSDRYKRIPDAFIVEGPLSGGHQG 184
GAGLP +PE+ + DVAL+P +++ +A +++C+ W RY R+PDA IVE G
Sbjct: 124 GAGLPLTLPEYTAAYPDVALVPSVANMEAAQLICETWQSRYHRLPDALIVENCQQVGGHF 183
Query: 185 FKYEDCFKEEFRLENLVPKVVEASKE--WGNIPIIAAGGIWD--------RKDIDTMLSL 234
+ E F LE ++ ++ + K +IP+I +GGI D R DID M+++
Sbjct: 184 TQCEQVNIPGFSLELVIRQLRDYCKNHLGASIPLIVSGGISDSLQDSSASRTDIDRMIAI 243
Query: 235 GASGVQMATRFLGTKECDA-KVYADLLPTLKKEDILLIKSPVGYPARAINTGVIKRIEEG 293
GA GVQ+ TRF+ T ECDA + Y D + +DI+ + SPVG P RA++ +++
Sbjct: 244 GADGVQIGTRFVTTVECDADQRYKDYHLQAQSKDIVTVPSPVGKPCRALHNLFTEQVMSN 303
Query: 294 NAP-KIACVSNCVAPCNRGEEAKKVGYCIADGLGRSYLGNREEGLYFTGANGYRVDKIIS 352
++ + C++NC+ C ++ K YC+ L ++ G+ E GL F+GAN IIS
Sbjct: 304 SSNLEKRCIANCLETCLCRDKGKT--YCLLQALAQAARGDVENGLIFSGANAGYTQDIIS 361
Query: 353 VHELIKELTE 362
V EL+ ELT+
Sbjct: 362 VPELMTELTQ 371
>ref|NP_213109.1| (NC_000918) putative protein [Aquifex aeolicus]
pir||B70315 hypothetical protein aq_159 - Aquifex aeolicus
gb|AAC06513.1| (AE000676) putative protein [Aquifex aeolicus]
Length = 182
Score = 179 bits (455), Expect = 3e-44
Identities = 88/161 (54%), Positives = 117/161 (72%), Gaps = 3/161 (1%)
Query: 204 VVEASKEWGNIPIIAAGGIWDRKDIDTMLSLGASGVQMATRFLGTKECDA-KVYADLLPT 262
++E +K+WG+IP+I AGG+W DI + +GASGVQMATRF+ T ECDA ++Y +L+
Sbjct: 1 MLEEAKKWGDIPVIVAGGVWSYYDIKKFIDMGASGVQMATRFIATHECDAPQIYKELVTN 60
Query: 263 LKKEDILLIKSPVGYPARAINTGVIKRIEEGNAPKIACVSNCVAPCNRGEEAKKVGYCIA 322
L KEDI+L KSPVGYP R I T I+R+ G CVS+CV PCN+GEEAKKVG+CIA
Sbjct: 61 LNKEDIMLFKSPVGYPLRVIKTPFIERLLSGYNGWKGCVSHCVVPCNKGEEAKKVGFCIA 120
Query: 323 DGLGRSYLGNREEGLYFTGANGY--RVDKIISVHELIKELT 361
D LG ++LG+ EEG++ +GANG+ + II V EL+ LT
Sbjct: 121 DRLGLAWLGDYEEGIFISGANGHWLKYQGIIHVKELLDILT 161
>ref|NP_518235.1| (NC_003295) CONSERVED HYPOTHETICAL PROTEIN [Ralstonia solanacearum]
emb|CAD13642.1| (AL646057) CONSERVED HYPOTHETICAL PROTEIN [Ralstonia solanacearum]
Length = 402
Score = 162 bits (409), Expect = 7e-39
Identities = 122/365 (33%), Positives = 183/365 (49%), Gaps = 22/365 (6%)
Query: 18 PIFQGGMGVGISWDELAGNVAKEGALGVISAVGTGYYKN--MRFVERIVAKKPFEALNFY 75
PI QGGMGVGIS LAG VA+EG +G I+++ ++ E+ K A N
Sbjct: 15 PIVQGGMGVGISAHRLAGAVAREGGVGTIASIDLRHHHADLAAATEKSHDKAAINAANLV 74
Query: 76 SKKALNEIFANARKICGNNPLGANILYAINDYGRVLRDSCEAGANIIITGAGLPTNMPEF 135
+ EI A GN + N++ A+ + ++R +CE+GA+ I+ GAGLP ++PE
Sbjct: 75 ALD--REIRAAREGSQGNGLIAVNVMKAVESHAALVRQACESGADAIVMGAGLPLDLPEM 132
Query: 136 AKDFSDVALIPIISSAKALKILCKRWSDRYKRIPDAFIVEGPL-SGGHQG-FKYEDCFKE 193
+ VALIPI+S A+ + ++ KRW + R+PDA ++E P +GGH G + +D E
Sbjct: 133 TAEHPKVALIPILSDARGVGVVLKRWMKK-ARLPDAVVIEHPAHAGGHLGAARIQDLSDE 191
Query: 194 EFRLENLVPKVVEASKEWG----NIPIIAAGGIWDRKDIDTMLSLGASGVQMATRFLGTK 249
F ++ + E + G IP+I AGGI + L GA+ VQ+ T F T+
Sbjct: 192 RFSFSRVLDECRELFVKLGLATEQIPLILAGGIDSHAKVRHWLDKGAAAVQLGTAFAVTE 251
Query: 250 ECDAKV-YADLLPTLKKEDILLIKSPVGYPARAINTGVIKR------IEEGNAPKIACVS 302
E DA + +L + DI S G PARA+ T + R + A C+
Sbjct: 252 EGDAHPRFKRVLTGAEDGDITEFISVAGLPARAVMTPWLSRYLSRETALQAKAKVRDCLQ 311
Query: 303 --NCVAPCNRGEEAKKVG-YCIADGLGRSYLGNREEGLYFTGANGYRVDKII-SVHELIK 358
+C+ C + KVG +CI L ++ G+ E GL+F GA + I V EL+
Sbjct: 312 GFDCLQTCGLRDGLGKVGQFCIDLKLAQALRGDVERGLFFRGAGKLPFGQAIRPVRELMH 371
Query: 359 ELTEG 363
L G
Sbjct: 372 YLLTG 376
>ref|NP_284382.1| (NC_003116) hypothetical protein [Neisseria meningitidis Z2491]
pir||F81861 hypothetical protein NMA1666 [imported] - Neisseria meningitidis
(group A strain Z2491)
emb|CAB84894.1| (AL162756) hypothetical protein [Neisseria meningitidis Z2491]
Length = 391
Score = 148 bits (373), Expect = 1e-34
Identities = 114/370 (30%), Positives = 186/370 (49%), Gaps = 28/370 (7%)
Query: 18 PIFQGGMGVGISWDELAGNVAKEGALGVISAVGTGYYKNMRFVERIV--AKKPFEALNFY 75
PI QGGMGVG+S L+ VA+E +G I++V + E + +++ + +LN
Sbjct: 17 PIVQGGMGVGVSASGLSSAVARENGIGTIASVDLRHLHEDLLAESQINPSEEKYTSLNC- 75
Query: 76 SKKALNEIFANARKIC-GNNPLGANILYAINDYGRVLRDSCEAGANIIITGAGLPTNMPE 134
AL+ A+ G + N++ A+ D+ +R +CE+GA+ ++ GAGLP ++PE
Sbjct: 76 --TALDREIQKAKSASEGKGLIAVNVMKAVKDHAAYVRQACESGADAVVMGAGLPLDLPE 133
Query: 135 FAKDF-SDVALIPIISSAKALKILCKRWSDRYKRIPDAFIVEGPL-SGGHQGFK-YEDCF 191
+ + DVAL+PI+S ++ + I+ KRW + +PDA +VE P + GH G E
Sbjct: 134 MTEGYHKDVALLPILSESRGINIVLKRWMKK-GILPDAIVVEHPAHAAGHLGASTVEGVN 192
Query: 192 KEEFRLENLVPKVVEASKEWG----NIPIIAAGGIWDRKDIDTML-SLGASGVQMATRFL 246
+F + ++ + E K G IP+I AGG+ + + + T L + GAS VQ+ T F
Sbjct: 193 DAKFDFKRVIEETFEVFKSLGLESEKIPLILAGGMANFEKVKTALKNWGASAVQIGTAFA 252
Query: 247 GTKECDAKV-YADLLPTLKKEDILLIKSPVGYPARAINT----GVIKRIEE----GNAPK 297
T+E DA + + L + E ++ S G PAR + + IKR + A
Sbjct: 253 VTEEGDAHLNFKKTLAGAETEKVVEFMSVAGLPARGVRSKFLDSYIKRESKLQANAKADP 312
Query: 298 IACVS--NCVAPCNRGEEAKKVG-YCIADGLGRSYLGNREEGLYFTGANGYRVDKII-SV 353
C NC+ C + K G +CI L ++ G ++GL+F G + I +V
Sbjct: 313 RRCTQGLNCLTSCGLRDGLSKAGQFCIDIQLAAAFRGEVDKGLFFRGKDPLPFGNAIRTV 372
Query: 354 HELIKELTEG 363
E I+ L G
Sbjct: 373 RETIQYLLTG 382
>ref|NP_274463.1| (NC_003112) conserved hypothetical protein [Neisseria meningitidis
MC58]
pir||E81081 conserved hypothetical protein NMB1452 [imported] - Neisseria
meningitidis (group B strain MD58)
gb|AAF41811.1| (AE002495) conserved hypothetical protein [Neisseria meningitidis
MC58]
Length = 379
Score = 148 bits (373), Expect = 1e-34
Identities = 109/347 (31%), Positives = 177/347 (50%), Gaps = 27/347 (7%)
Query: 18 PIFQGGMGVGISWDELAGNVAKEGALGVISAVGTGYYKNMRFVERIV--AKKPFEALNFY 75
PI QGGMGVG+S L+ VA+E +G I++V + E + +++ + +LN
Sbjct: 17 PIVQGGMGVGVSASGLSSAVARENGIGTIASVDLRHLHEDLLAESQINPSEEKYTSLNC- 75
Query: 76 SKKALNEIFANARKIC-GNNPLGANILYAINDYGRVLRDSCEAGANIIITGAGLPTNMPE 134
AL+ A+ G + N++ A+ D+ +R +CE+GA+ ++ GAGLP ++PE
Sbjct: 76 --TALDREIQKAKSASEGKGLIAVNVMKAVKDHAAYVRQACESGADAVVMGAGLPLDLPE 133
Query: 135 FAKDF-SDVALIPIISSAKALKILCKRWSDRYKRIPDAFIVEGPL-SGGHQGFK-YEDCF 191
+ + DVAL+PI+S ++ + I+ KRW + +PDA +VE P + GH G E
Sbjct: 134 MTEGYHKDVALLPILSESRGINIVLKRWMKK-GILPDAIVVEHPAHAAGHLGASTVEGVN 192
Query: 192 KEEFRLENLVPKVVEASKEWG----NIPIIAAGGIWDRKDIDTML-SLGASGVQMATRFL 246
+F + ++ + E K G IP+I AGG+ + + + T L + GAS VQ+ T F
Sbjct: 193 DAKFDFKRVIEETFEVFKSLGLESEKIPLILAGGMANFEKVKTALKNWGASAVQIGTAFA 252
Query: 247 GTKECDAKV-YADLLPTLKKEDILLIKSPVGYPARAINT----GVIKRIEE----GNAPK 297
T+E DA + + L + E ++ S G PAR + T IKR + A
Sbjct: 253 VTEEGDAHLNFKKTLAGAETEKVVEFMSVAGLPARGVRTKFLDSYIKRESKLQTNAKADP 312
Query: 298 IACVS--NCVAPCNRGEEAKKVG-YCIADGLGRSYLGNREEGLYFTG 341
C NC+ C + K G +CI L ++ G ++GL+F G
Sbjct: 313 RRCTQGLNCLTSCGLRDGLSKAGQFCIDIQLAAAFRGEVDKGLFFRG 359
>ref|NP_350159.1| (NC_003030) Dioxygenase related to 2-nitropropane dioxygenase
[Clostridium acetobutylicum]
gb|AAK81499.1|AE007854_6 (AE007854) Dioxygenase related to 2-nitropropane dioxygenase
[Clostridium acetobutylicum]
Length = 310
Score = 109 bits (272), Expect = 6e-23
Identities = 91/289 (31%), Positives = 135/289 (46%), Gaps = 54/289 (18%)
Query: 15 IKFPIFQGGMGVGISWDELAGNVAKEGALGVISAVGTGYYKNMRFVERIVAKKPFEALNF 74
IK+PI QGGM ++ LA V+ G LG+I+A A P E +
Sbjct: 12 IKYPIIQGGMA-WVADSSLAAGVSNAGGLGIIAA----------------ANAPVEYVRD 54
Query: 75 YSKKALNEIFANARKICGNNPLGANILYAINDYGRVLRDSCEAGANIIITGAGLPTNMPE 134
+KA K + P G NI+ ++ V + CE G ++ TGAG P +
Sbjct: 55 EIRKA---------KKLTDKPFGVNIMLLSDNAEEVAKMVCEEGVKVVTTGAGNPGKYID 105
Query: 135 FAKDFSDVALIPIISSAKALKILCKRWSDRYKRIP-DAFIVEGPLSGGHQGFKYEDCFKE 193
K+ D+ +IP+++S + R +R DA + EG SGGH G
Sbjct: 106 MWKEH-DIKVIPVVASVALAR--------RMERCGVDAVVAEGCESGGHVG--------- 147
Query: 194 EFRLENLVPKVVEASKEWGNIPIIAAGGIWDRKDIDTMLSLGASGVQMATRFLGTKECDA 253
E LVP+VV+A NIP+IAAGGI D + + +LGASGVQ+ TRFL KEC
Sbjct: 148 ELTTMALVPQVVDAI----NIPVIAAGGIGDGRGVAAAFALGASGVQVGTRFLIAKECTV 203
Query: 254 -KVYADLLPTLKKEDILLIKSPVGYPARAINTGVIKRI----EEGNAPK 297
+ Y + + K D + G+P R + + ++ +EG +P+
Sbjct: 204 HQNYKNKVLKAKDIDTEVTGRSTGHPVRVLRNKLARKYKLMEKEGASPE 252
>ref|NP_603081.1| (NC_003454) Enoyl-[acyl-carrier-protein] reductase; FabL; NADPH
[Fusobacterium nucleatum subsp. nucleatum ATCC 25586]
gb|AAL94380.1| (AE010531) Enoyl-[acyl-carrier-protein] reductase; FabL; NADPH
[Fusobacterium nucleatum subsp. nucleatum ATCC 25586]
Length = 318
Score = 107 bits (266), Expect = 3e-22
Identities = 93/288 (32%), Positives = 130/288 (44%), Gaps = 53/288 (18%)
Query: 15 IKFPIFQGGMGVGISWDELAGNVAKEGALGVISAVGTGYYKNMRFVERIVAKKPFEALNF 74
IK+PIFQG M +S ELAG V+K+G LG+I+ G
Sbjct: 12 IKYPIFQGAMA-WVSGGELAGAVSKDGGLGIIAGGGM----------------------- 47
Query: 75 YSKKALNEIFANARKICGNNPLGANILYAINDYGRVLRDSCEAGANIIITGAGLPTNMPE 134
+ L E A+ I NP G N++ D + E G +I TGAG P E
Sbjct: 48 -EPELLRENIRKAKAIT-TNPFGVNLMLLRPDVEDQMNVCIEEGVKVITTGAGNPGAFME 105
Query: 135 FAKDFSDVALIPIISSAKALKILCKRWSDRYKRI-PDAFIVEGPLSGGHQGFKYEDCFKE 193
K +++ +IP+I + K ++R ++I DA IVEG SGGH G
Sbjct: 106 KLKA-ANIKVIPVIPTVKL--------AERMEKIGADAVIVEGMESGGHVG--------- 147
Query: 194 EFRLENLVPKVVEASKEWGNIPIIAAGGIWDRKDIDTMLSLGASGVQMATRFLGTKEC-D 252
L+P+VV A NIP+IAAGGI K L++GA G+Q T FL KEC
Sbjct: 148 TLTTMALLPQVVNAV----NIPVIAAGGIASGKQFLAALAMGAEGIQCGTIFLTAKECLI 203
Query: 253 AKVYADLLPTLKKEDILLIKSPVGYPARAINTGVIK---RIEEGNAPK 297
+ Y +++ K + + G+P R I + K +E APK
Sbjct: 204 HQNYKNIILKAKDRSTTVTGTSTGHPVRVIENKLAKEMIELERSGAPK 251
>ref|NP_623092.1| (NC_003869) Dioxygenases related to 2-nitropropane dioxygenase
[Thermoanaerobacter tengcongensis]
gb|AAM24696.1| (AE013105) Dioxygenases related to 2-nitropropane dioxygenase
[Thermoanaerobacter tengcongensis]
Length = 313
Score = 105 bits (262), Expect = 8e-22
Identities = 95/287 (33%), Positives = 131/287 (45%), Gaps = 51/287 (17%)
Query: 15 IKFPIFQGGMGVGISWDELAGNVAKEGALGVISAVGTGYYKNMRFVERIVAKKPFEALNF 74
IK+PIFQGGM ++ ELA V+ G LG+I A FV + K
Sbjct: 12 IKYPIFQGGMA-WVATAELAAAVSNAGGLGIIGAGNAP----ASFVREQIRK-------- 58
Query: 75 YSKKALNEIFANARKICGNNPLGANILYAINDYGRVLRDSCEAGANIIITGAGLPTNMPE 134
AR++ + P G N++ V+ E ++I TGAG P
Sbjct: 59 ------------ARELT-DKPFGVNVMLLSPYVDEVMEVILEERVDVITTGAGNPGKYIP 105
Query: 135 FAKDFSDVALIPIISSAKALKILCKRWSDRYKRIPDAFIVEGPLSGGHQGFKYEDCFKEE 194
K+ + +IP+++S L KR D DA I EG SGGH G E
Sbjct: 106 RLKE-RGIKVIPVVASVA----LAKRMEDIGV---DAVIAEGTESGGHVG---------E 148
Query: 195 FRLENLVPKVVEASKEWGNIPIIAAGGIWDRKDIDTMLSLGASGVQMATRFLGTKECDAK 254
LVP+VV+A NIP+IAAGGI D + LGASGVQM TRF+ + EC A
Sbjct: 149 LTTFALVPQVVDAV----NIPVIAAGGIADGRGFAAAFCLGASGVQMGTRFVCSTECTAH 204
Query: 255 V-YADLLPTLKKEDILLIKSPVGYPARAIN---TGVIKRIEEGNAPK 297
Y + + K D ++ G+P RA+ T +++E+ APK
Sbjct: 205 PRYKEYILKAKDRDTVVTGRSTGHPVRALRNRLTREFEKLEQMGAPK 251
>ref|NP_661302.1| (NC_002932) conserved hypothetical protein [Chlorobium tepidum TLS]
gb|AAM71644.1| (AE012817) conserved hypothetical protein [Chlorobium tepidum TLS]
Length = 420
Score = 97.8 bits (242), Expect = 2e-19
Identities = 95/292 (32%), Positives = 139/292 (47%), Gaps = 30/292 (10%)
Query: 18 PIFQGGMGVGISWDELAGNVAKEGALGVISAVGTGYYKNMRFVERIVA-KKPFEALNFYS 76
PI GGMGV IS ELA + + G +G IS + + F VA K+ A N +
Sbjct: 17 PIVIGGMGVNISTSELALSAERLGGIGHISDAEVMFVCDQLFGTSYVADKRQMYASNVNN 76
Query: 77 KKALN-----EIFANARKI---------CGNNPLGANIL--YAINDYGRVLR----DSCE 116
+ + E A A+K GN + N + +N+ L+ + E
Sbjct: 77 RDKSSVHFDLEQLAEAQKRFVSHTISQKTGNGAIFMNCMEKLTMNNSAATLKVRMEAAME 136
Query: 117 AGANIIITGAGLPTNMPEFAKD---FSDVALIPIISSAKALKILCKRWSDRYKRIPDAFI 173
AG + I AGL + + F DV L +ISS +AL I KR + R +R PD +
Sbjct: 137 AGIDGITLAAGLHLRSLDLISEHERFRDVKLGIVISSVRALSIFLKR-AMRLQRPPDYIV 195
Query: 174 VEGPLSGGHQGFKYEDCFKEEFRLENLVPKVVE-ASKEWGNIPIIAAGGIWDRKDIDTML 232
VEGPL+GGH GF +D + L+++V + + KE +IPII AGGI+ D L
Sbjct: 196 VEGPLAGGHLGFGPDDWQSQS--LQSIVAETLAFLKKENLDIPIIPAGGIFTGTDAVEYL 253
Query: 233 SLGASGVQMATRFLGTKECDA--KVYADLLPTLKKEDILLIKSPVGYPARAI 282
GA+ VQ+ATRF +E +V + ++ + + SP GYP R +
Sbjct: 254 QAGAAAVQVATRFTIARESGLPDEVKQHYINASPEDVEVNLSSPTGYPMRML 305
>ref|NP_470152.1| (NC_003212) similar to oxidoreductases [Listeria innocua]
emb|CAC96042.1| (AL596166) similar to oxidoreductases [Listeria innocua]
Length = 309
Score = 95.1 bits (235), Expect = 1e-18
Identities = 88/289 (30%), Positives = 129/289 (44%), Gaps = 55/289 (19%)
Query: 15 IKFPIFQGGMGVGISWDELAGNVAKEGALGVISAVGTGYYKNMRFVERIVAKKPFEALNF 74
IK+PI QG M I+ L V+ G LG+I++ G + A+ E +
Sbjct: 9 IKYPIIQGAMAQ-IAKAPLVAAVSNAGGLGIIASGG------------MTAEMLREEIQ- 54
Query: 75 YSKKALNEIFANARKICGNNPLGANILYAINDYGRVLRDSCEAGANIIITGAGLPTNMPE 134
KAL + P G N++ + + + E I+ TGAG P
Sbjct: 55 -KTKALTD-----------KPFGVNLMLMMTNIAELTEVIIEEKVGIVTTGAGTPKTFMP 102
Query: 135 FAKDFSDVALIPIISSAKALKILCKRWSDRYKRIPDAFIVEGPLSGGHQGFKYEDCFKEE 194
K+ + + +IP++ S K + K +D A I EG +GGH G E
Sbjct: 103 IWKE-AGIIVIPVVPSVMIAKRMEKMGAD-------AVIAEGTEAGGHVG---------E 145
Query: 195 FRLENLVPKVVEASKEWGNIPIIAAGGIWDRKDIDTMLSLGASGVQMATRFLGTKECDAK 254
L+P++V+A IP+I AGGI D + I L+LGA GVQ+ TRFL T EC
Sbjct: 146 TTTMALLPQIVDAV----TIPVIGAGGIADGRGIAAALALGAKGVQIGTRFLATDEC--P 199
Query: 255 VYADLLPTLKK---EDILLIKSPVGYPARAINTGVIK---RIEEGNAPK 297
V+ D + K D ++ G P R+I +IK R+EE NA +
Sbjct: 200 VHPDFKAAVIKASDRDTMVTGRKAGAPVRSIKNKMIKEYIRLEEENADR 248
>ref|NP_464341.1| (NC_003210) similar to oxidoreductases [Listeria monocytogenes
EGD-e]
emb|CAC98892.1| (AL591976) similar to oxidoreductases [Listeria monocytogenes]
Length = 309
Score = 90.9 bits (224), Expect = 2e-17
Identities = 87/289 (30%), Positives = 127/289 (43%), Gaps = 55/289 (19%)
Query: 15 IKFPIFQGGMGVGISWDELAGNVAKEGALGVISAVGTGYYKNMRFVERIVAKKPFEALNF 74
IK+PI QG M I+ L V+ G LG+I++ G + A E +
Sbjct: 9 IKYPIIQGAMAQ-IAKAPLVAAVSNAGGLGIIASGG------------MTADMLREEIQ- 54
Query: 75 YSKKALNEIFANARKICGNNPLGANILYAINDYGRVLRDSCEAGANIIITGAGLPTNMPE 134
KAL + G N++ + + + E I+ TGAG P
Sbjct: 55 -KTKALTD-----------KAFGVNLMLMMTNIAELTEVIIEEKVGIVTTGAGTPKTFMP 102
Query: 135 FAKDFSDVALIPIISSAKALKILCKRWSDRYKRIPDAFIVEGPLSGGHQGFKYEDCFKEE 194
K+ + + +IP++ S K + K +D A I EG +GGH G E
Sbjct: 103 IWKE-AGIIVIPVVPSVMIAKRMEKMGAD-------AVIAEGTEAGGHVG---------E 145
Query: 195 FRLENLVPKVVEASKEWGNIPIIAAGGIWDRKDIDTMLSLGASGVQMATRFLGTKECDAK 254
L+P++V+A IP+I AGGI D + I L+LGA GVQ+ TRFL T EC
Sbjct: 146 TTTMALLPQIVDAV----TIPVIGAGGIADGRGIVAALALGAKGVQIGTRFLATDEC--P 199
Query: 255 VYADLLPTLKK---EDILLIKSPVGYPARAINTGVIK---RIEEGNAPK 297
V+ D + K D ++ G P R+I +IK R+EE NA +
Sbjct: 200 VHPDFKAAVIKASDRDTMVTGRKAGAPVRSIKNKMIKEYIRLEEENADR 248
>ref|NP_228609.1| (NC_000853) conserved hypothetical protein [Thermotoga maritima]
pir||A72335 conserved hypothetical protein - Thermotoga maritima (strain MSB8)
gb|AAD35882.1|AE001747_25 (AE001747) conserved hypothetical protein [Thermotoga maritima]
Length = 314
Score = 89.0 bits (219), Expect = 8e-17
Identities = 93/348 (26%), Positives = 152/348 (42%), Gaps = 65/348 (18%)
Query: 15 IKFPIFQGGMGVGISWDELAGNVAKEGALGVISAVGTGYYKNMRFVERIVAKKPFEALNF 74
I+ PI GGM LA V++ G LG+I G+G A KP +
Sbjct: 13 IEHPILMGGMAWA-GTPTLAAAVSEAGGLGII---GSG------------AMKPDDL--- 53
Query: 75 YSKKALNEIFANARKICGNNPLGANILYAINDYGRVLRDSCEAGANIIITGAGLPTNMPE 134
+KA++E+ K P G NI+ +++ E ++ GAG PT
Sbjct: 54 --RKAISELRQKTDK-----PFGVNIILVSPWADDLVKVCIEEKVPVVTFGAGNPTKYIR 106
Query: 135 FAKDFSDVALIPIISSAKALKILCKRWSDRYKRIPDAFIVEGPLSGGHQGFKYEDCFKEE 194
K+ + +IP+++S +++ + +D A I EG SGGH G
Sbjct: 107 ELKE-NGTKVIPVVASDSLARMVERAGAD-------AVIAEGMESGGHIGEV------TT 152
Query: 195 FRLENLVPKVVEASKEWGNIPIIAAGGIWDRKDIDTMLSLGASGVQMATRFLGTKECDA- 253
F L N V + V NIP+IAAGGI D + + +LGA VQM TRF+ + E D
Sbjct: 153 FVLVNKVSRSV-------NIPVIAAGGIADGRGMAAAFALGAEAVQMGTRFVASVESDVH 205
Query: 254 KVYADLLPTLKKEDILLIKSPVGYPARAINTGVIKRIEEGNAPKIACVSNCVAPCNRGEE 313
VY + + D ++ + +G+PAR + T ++I+E E
Sbjct: 206 PVYKEKIVKASIRDTVVTGAKLGHPARVLRTPFARKIQE----------------MEFEN 249
Query: 314 AKKVGYCIADGLGRSYL-GNREEGLYFTGANGYRVDKIISVHELIKEL 360
+ + L R+ + G+ E G + G + +D+I V ++I+++
Sbjct: 250 PMQAEEMLVGSLRRAVVEGDLERGSFMVGQSAGLIDEIKPVKQIIEDI 297
>ref|NP_267944.1| (NC_002662) 2-nitropropane deoxygenase (EC 1.13.11.32) [Lactococcus
lactis subsp. lactis]
gb|AAK05885.1|AE006408_9 (AE006408) 2-nitropropane deoxygenase (EC 1.13.11.32) [Lactococcus
lactis subsp. lactis]
Length = 281
Score = 84.3 bits (207), Expect = 2e-15
Identities = 76/272 (27%), Positives = 124/272 (44%), Gaps = 52/272 (19%)
Query: 15 IKFPIFQGGMGVGISWDELAGNVAKEGALGVISAVGTGYYKNMRFVERIVAKKPFEALNF 74
IK+P+FQGGM S EL V+ GALG+I + G + + R++ K
Sbjct: 9 IKYPLFQGGMAWA-SNAELVAAVSNNGALGIIGSGG----RTANELRRMIRKT------- 56
Query: 75 YSKKALNEIFANARKICGNNPLGANILYAINDYGRVLRDSCEAGANIIITGAGLPTNMPE 134
K + P G N++ + ++L CE +++ TGAG P + +
Sbjct: 57 --------------KTLTSQPFGVNLMLLDKNIKQLLEVICEEKISVVTTGAGSPKEIID 102
Query: 135 FAKDFSDVALIPIISSAK-ALKILCKRWSDRYKRIP-DAFIVEGPLSGGHQGFKYEDCFK 192
+++ L P++ + + ALK+L +P IVEG +GGH G +
Sbjct: 103 TIIA-NNIKLFPVVPNKEIALKML---------NLPISGIIVEGNEAGGHVGSQ------ 146
Query: 193 EEFRLENLVPKVVEASKEWGNIPIIAAGGIWDRKDIDTMLSLGASGVQMATRFLGTKECD 252
L +L+ ++ +P+IAAGGI+D LGA+GVQ+ T FL KEC
Sbjct: 147 ---NLASLLKEIAPICP----LPLIAAGGIYDHHTASLANILGANGVQVGTAFLLAKECQ 199
Query: 253 -AKVYADLLPTLKKEDILLIKSPVGYPARAIN 283
+ +Y +L+ ++ LI G+ R +N
Sbjct: 200 ISPIYQELICKGEENGTSLISDKNGHLTRLLN 231
>ref|NP_269774.1| (NC_002737) putative trans-2-enoyl-ACP reductase II [Streptococcus
pyogenes] [Streptococcus pyogenes M1 GAS]
ref|NP_607844.1| (NC_003485) putative trans-2-enoyl-ACP reductase II [Streptococcus
pyogenes MGAS8232]
gb|AAK34495.1| (AE006603) putative trans-2-enoyl-ACP reductase II [Streptococcus
pyogenes M1 GAS]
gb|AAL98343.1| (AE010088) putative trans-2-enoyl-ACP reductase II [Streptococcus
pyogenes MGAS8232]
Length = 323
Score = 84.3 bits (207), Expect = 2e-15
Identities = 82/269 (30%), Positives = 117/269 (43%), Gaps = 48/269 (17%)
Query: 15 IKFPIFQGGMGVGISWDELAGNVAKEGALGVISAVGTGYYKNMRFVERIVAKKPFEALNF 74
I +PIFQGGM ++ +LAG V+ G LG+I A K N
Sbjct: 11 IDYPIFQGGMA-WVADGDLAGAVSNAGGLGIIGGGN--------------APKEVVKANI 55
Query: 75 YSKKALNEIFANARKICGNNPLGANILYAINDYGRVLRDSCEAGANIIITGAGLPTNMPE 134
KA+ + P G NI+ ++ E G ++ TGAG P E
Sbjct: 56 DRVKAITD-----------RPFGVNIMLLSPFADDIVDLVIEEGVKVVTTGAGNPGKYME 104
Query: 135 FAKDFSDVALIPIISSAKALKILCKRWSDRYKRIPDAFIVEGPLSGGHQGFKYEDCFKEE 194
+ + ++P++ S L KR K DA I EG +GGH G +
Sbjct: 105 RLHQ-AGIIVVPVVPSVA----LAKRME---KLGVDAVIAEGMEAGGHIG---------K 147
Query: 195 FRLENLVPKVVEASKEWGNIPIIAAGGIWDRKDIDTMLSLGASGVQMATRFLGTKECDA- 253
+LV +VVEA +IP+IAAGGI D LGA VQ+ TRF+ KE +A
Sbjct: 148 LTTMSLVRQVVEAV----SIPVIAAGGIADGHGAAAAFMLGAEAVQIGTRFVVAKESNAH 203
Query: 254 KVYADLLPTLKKEDILLIKSPVGYPARAI 282
+ + D + K D ++ VG+P R+I
Sbjct: 204 QNFKDKILAAKDIDTVISAQVVGHPVRSI 232
>ref|NP_243505.1| (NC_002570) BH2639~unknown conserved protein in others [Bacillus
halodurans]
dbj|BAB06358.1| (AP001516) BH2639~unknown conserved protein in others [Bacillus
halodurans]
Length = 325
Score = 81.6 bits (200), Expect = 1e-14
Identities = 98/359 (27%), Positives = 154/359 (42%), Gaps = 74/359 (20%)
Query: 15 IKFPIFQGGMGVGISWDELAGNVAKEGALGVISAVGTGYYKNMRF-VERIVAKKPFEALN 73
I++PI QGG+ +++ ELA V+ G LG I+A+ + +R +ER+ K
Sbjct: 12 IQYPIIQGGLAY-LAYSELAAAVSNAGGLGQITAMSLQGPEQLRKEIERVREKT------ 64
Query: 74 FYSKKALNEIFANARKICGNNPLGANILYAINDYGRVLRD----SCEAGANIIITGAGLP 129
+P G N +AI +GR D + E ++ G P
Sbjct: 65 -------------------EHPFGVN--FAIGQHGRPFEDMVQVAIEEDVPVVSMTGGNP 103
Query: 130 TNMPEFAKDFSDVALIPIISSAKALKILCKRWSDRYKRIPDAFIVEGPLSGGHQGFKYED 189
+ + S L+ + S +A+K + DA +V G GGH G
Sbjct: 104 APILTMLEHTSIRKLVLVASRRQAVKA--------EELGADAVMVVGHEGGGHLG----- 150
Query: 190 CFKEEFRLENLVPKVVEASKEWGNIPIIAAGGIWDRKDIDTMLSLGASGVQMATRFLGTK 249
+++ LVP+VV+A +IP+IA+GGI D + +LGA G++M TRF+ T
Sbjct: 151 --RDDVGTMVLVPQVVDAV----SIPVIASGGIGDGRAWMAAHALGAEGIEMGTRFIATV 204
Query: 250 EC---DAKVYADLLPTLKKEDILLIKSPVGYPARAIN---TGVIKRIEEGNAPKIACVSN 303
EC AK Y + L + D ++IK +G PAR I T I IE+ N P +
Sbjct: 205 ECIHAHAK-YKERLVQGSELDTVVIKRSLGSPARVIRNDWTDHILTIEQTN-PSYDALKE 262
Query: 304 CVAPCNRGEEAKKVGYCIADGLGRSYLGNREEGLYFTGANGYRVDKIISVHELIKELTE 362
++ GE K Y G ++G + G R+ I +V +L + E
Sbjct: 263 YIS----GEANKNF----------IYDGQEDKGFGWAGQVMGRIRDIPTVQQLFTRMIE 307
>ref|NP_242071.1| (NC_002570) BH1205~unknown conserved protein [Bacillus halodurans]
dbj|BAB04924.1| (AP001511) BH1205~unknown conserved protein [Bacillus halodurans]
Length = 365
Score = 81.3 bits (199), Expect = 2e-14
Identities = 88/310 (28%), Positives = 131/310 (41%), Gaps = 63/310 (20%)
Query: 14 TIKFPIFQGGMGVGISWDELAGNVAKEGALGVISAVGTGYYKNMRFVERIVAKKPFEALN 73
+I+FPI Q GM G + EL V+ G LG I G GY
Sbjct: 11 SIEFPIVQAGMAGGPTTPELVAAVSNHGGLGTI---GAGYM------------------- 48
Query: 74 FYSKKALNEIFANARKICGNNPLGANILYA--INDYGRVLRDSCEAGANIIITGAGLPTN 131
+ +AL R++ + P N+ DY R+ G G
Sbjct: 49 --TVEALEVAIKRIRQLT-DRPFAVNLFCTDWACDYSRLEEVKPVLDQIRANLGLGKLEE 105
Query: 132 MP---EFAKDFSDVAL---IPIISSAKALKILCKRWSDRYKRI----------------- 168
+P + +D D+ L +P+ SSA L L K +R K
Sbjct: 106 VPAGRDMFRDKFDLLLKERVPVFSSAFGL--LAKHDVERLKEFGILWTAMVTTVGEAQEA 163
Query: 169 ----PDAFIVEGPLSGGHQGFKYEDCFKEEFRLE--NLVPKVVEASKEWGNIPIIAAGGI 222
D + +G +GGH+G D K+ + +LVP++V+ + +P++AAGG+
Sbjct: 164 EQQGADVIVAQGSDAGGHRGTFSVDEKKDGASIGTFSLVPQIVDHVQ----VPVVAAGGV 219
Query: 223 WDRKDIDTMLSLGASGVQMATRFLGTKEC-DAKVYADLLPTLKKEDILLIKSPVGYPARA 281
D + + L+LGA+GVQM TRFL TKE A Y L T +ED +L ++ G PAR
Sbjct: 220 VDGRGLVAALALGAAGVQMGTRFLLTKEAGTASYYRKALLTSTEEDTVLTRAFSGRPARG 279
Query: 282 INTGVIKRIE 291
I+ I + E
Sbjct: 280 IDNEFINQFE 289
>ref|NP_344942.1| (NC_003028) enoyl-(acyl-carrier-protein) reductase [Streptococcus
pneumoniae TIGR4]
gb|AAF98273.1|AF197933_3 (AF197933) trans-2-enoyl-ACP reductase II [Streptococcus
pneumoniae]
gb|AAK74582.1| (AE007354) enoyl-(acyl-carrier-protein) reductase [Streptococcus
pneumoniae TIGR4]
Length = 324
Score = 78.6 bits (192), Expect = 1e-13
Identities = 80/279 (28%), Positives = 118/279 (41%), Gaps = 50/279 (17%)
Query: 15 IKFPIFQGGMGVGISWDELAGNVAKEGALGVISAVGTGYYKNMRFVERIVAKKPFEALNF 74
I +PIFQGGM ++ +LAG V+K G LG+I A K N
Sbjct: 11 IDYPIFQGGMA-WVADGDLAGAVSKAGGLGIIGGGN--------------APKEVVKANI 55
Query: 75 YSKKALNEIFANARKICGNNPLGANILYAINDYGRVLRDSCEAGANIIITGAGLPTNMPE 134
K+L + P G NI+ ++ E G ++ TGAG P+ E
Sbjct: 56 DKIKSLTD-----------KPFGVNIMLLSPFVEDIVDLVIEEGVKVVTTGAGNPSKYME 104
Query: 135 FAKDFSDVALIPIISSAKALKILCKRWSDRYKRI-PDAFIVEGPLSGGHQGFKYEDCFKE 193
+ + + +IP++ S K R ++I DA I EG +GGH G
Sbjct: 105 RFHE-AGIIVIPVVPSVALAK--------RMEKIGADAVIAEGMEAGGHIG--------- 146
Query: 194 EFRLENLVPKVVEASKEWGNIPIIAAGGIWDRKDIDTMLSLGASGVQMATRFLGTKECDA 253
+ LV +V A +IP+IAAGGI D + LGA VQ+ TRF+ KE +A
Sbjct: 147 KLTTMTLVRQVATAI----SIPVIAAGGIADGEGAAAGFMLGAEAVQVGTRFVVAKESNA 202
Query: 254 KV-YADLLPTLKKEDILLIKSPVGYPARAINTGVIKRIE 291
Y + + + D + G+ RAI + + E
Sbjct: 203 HPNYKEKILKARDIDTTISAQHFGHAVRAIKNQLTRDFE 241
>ref|NP_357973.1| (NC_003098) Enoyl-acyl carrier protein(ACP) reductase.
[Streptococcus pneumoniae R6]
gb|AAK99183.1| (AE008418) Enoyl-acyl carrier protein(ACP) reductase.
[Streptococcus pneumoniae R6]
Length = 324
Score = 78.6 bits (192), Expect = 1e-13
Identities = 80/279 (28%), Positives = 118/279 (41%), Gaps = 50/279 (17%)
Query: 15 IKFPIFQGGMGVGISWDELAGNVAKEGALGVISAVGTGYYKNMRFVERIVAKKPFEALNF 74
I +PIFQGGM ++ +LAG V+K G LG+I A K N
Sbjct: 11 IDYPIFQGGMA-WVADGDLAGAVSKAGGLGIIGGGN--------------APKEVVKANI 55
Query: 75 YSKKALNEIFANARKICGNNPLGANILYAINDYGRVLRDSCEAGANIIITGAGLPTNMPE 134
K+L + P G NI+ ++ E G ++ TGAG P+ E
Sbjct: 56 DKIKSLTD-----------KPFGVNIMLLSPFVEDIVDLVIEEGVKVVTTGAGNPSKYME 104
Query: 135 FAKDFSDVALIPIISSAKALKILCKRWSDRYKRI-PDAFIVEGPLSGGHQGFKYEDCFKE 193
+ + + +IP++ S K R ++I DA I EG +GGH G
Sbjct: 105 RFHE-AGIIVIPVVPSVALAK--------RMEKIGADAVIAEGMEAGGHIG--------- 146
Query: 194 EFRLENLVPKVVEASKEWGNIPIIAAGGIWDRKDIDTMLSLGASGVQMATRFLGTKECDA 253
+ LV +V A +IP+IAAGGI D + LGA VQ+ TRF+ KE +A
Sbjct: 147 KLTTMTLVRQVATAV----SIPVIAAGGIADGEGAAAGFMLGAEAVQVGTRFVVAKESNA 202
Query: 254 KV-YADLLPTLKKEDILLIKSPVGYPARAINTGVIKRIE 291
Y + + + D + G+ RAI + + E
Sbjct: 203 HPNYKEKILKARDIDTTISAQHFGHAVRAIKNQLTRDFE 241
>ref|NP_471605.1| (NC_003212) similar to unknown proteins [Listeria innocua]
emb|CAC97501.1| (AL596171) similar to unknown proteins [Listeria innocua]
Length = 309
Score = 74.3 bits (181), Expect = 2e-12
Identities = 78/281 (27%), Positives = 116/281 (40%), Gaps = 52/281 (18%)
Query: 15 IKFPIFQGGMGVGISWDELAGNVAKEGALGVISAVGTGYYKNMRFVERIVAKKPFEALNF 74
IK+PI QG M I+ ELA V+ G LG+I++ G +R R+ +K
Sbjct: 9 IKYPILQGAMAQ-IATYELASAVSNAGGLGIIASGGMSA-DTLREQIRLCKEKT------ 60
Query: 75 YSKKALNEIFANARKICGNNPLGANILYAINDYGRVLRDSCEAGANIIITGAGLPTNMPE 134
P NI+ + + ++ E ++ TGAG P E
Sbjct: 61 ------------------TKPFAVNIMLMMPNCPELVDVIIEEDVRVVTTGAGTPKPFME 102
Query: 135 FAK--DFSDVALIPIISSAKALKILCKRWSDRYKRIPDAFIVEGPLSGGHQGFKYEDCFK 192
K +A+IP + A+ ++ + DA + EG +GGH G
Sbjct: 103 KFKAAGIKVIAVIPSVKIAQKMEEIGV----------DAVVAEGTEAGGHVG-------- 144
Query: 193 EEFRLENLVPKVVEASKEWGNIPIIAAGGIWDRKDIDTMLSLGASGVQMATRFLGTKECD 252
E LV +VV A NIP+IAAGGI D + + +LGASGVQ+ T FL +EC
Sbjct: 145 -ETTTMALVRQVVSAV----NIPVIAAGGIADGHGMAAVYALGASGVQIGTLFLVAEECP 199
Query: 253 AKV-YADLLPTLKKEDILLIKSPVGYPARAINTGVIKRIEE 292
+ + + G P R+I +IK+ E
Sbjct: 200 VPASFKQAVLDATDTSTTVTGRRNGAPVRSIKNPMIKKYVE 240
>ref|NP_465694.1| (NC_003210) similar to unknown proteins [Listeria monocytogenes
EGD-e]
emb|CAD00248.1| (AL591982) similar to unknown proteins [Listeria monocytogenes]
Length = 309
Score = 73.6 bits (179), Expect = 3e-12
Identities = 72/239 (30%), Positives = 103/239 (42%), Gaps = 51/239 (21%)
Query: 15 IKFPIFQGGMGVGISWDELAGNVAKEGALGVISAVGTGYYKNMRFVERIVAKKPFEALNF 74
IK+PI QG M I+ ELA V+ G LG+I++ G
Sbjct: 9 IKYPILQGAMAQ-IATYELASAVSNAGGLGIIASGG------------------------ 43
Query: 75 YSKKALNEIFANARKICGNNPLGANILYAINDYGRVLRDSCEAGANIIITGAGLPTNMPE 134
S AL E ++ P NI+ + + ++ E ++ TGAG P E
Sbjct: 44 MSADALREQIRLCKEKT-TKPFAVNIMLMMPNCPELVDVIIEEDVRVVTTGAGTPKPFME 102
Query: 135 --FAKDFSDVALIPIISSAKALKILCKRWSDRYKRIPDAFIVEGPLSGGHQGFKYEDCFK 192
A +A+IP + A+ ++ + DA + EG +GGH G
Sbjct: 103 KFKAAGIKVIAVIPSVKIAQKMEEIG----------VDAVVAEGTEAGGHVG-------- 144
Query: 193 EEFRLENLVPKVVEASKEWGNIPIIAAGGIWDRKDIDTMLSLGASGVQMATRFLGTKEC 251
E LV +VV A NIP+IAAGGI D + + +LGASGVQ+ T FL +EC
Sbjct: 145 -ETTTMALVRQVVSAV----NIPVIAAGGIADGHGMAAVYALGASGVQIGTLFLVAEEC 198
>ref|NP_422173.1| (NC_002696) conserved hypothetical protein [Caulobacter crescentus
CB15]
gb|AAK25341.1| (AE005999) conserved hypothetical protein [Caulobacter crescentus
CB15]
Length = 321
Score = 67.4 bits (163), Expect = 2e-10
Identities = 75/275 (27%), Positives = 109/275 (39%), Gaps = 63/275 (22%)
Query: 15 IKFPIFQGGMGVGISWDELAGNVAKEGALGVISAVGTGYYKNMRFVERIVAKKPFEALNF 74
I+ PI GMG G+S+ LA V+ G GV+ GT
Sbjct: 13 IEHPILLAGMG-GVSYAPLAAAVSNAGGYGVLGMAGTS--------------------PD 51
Query: 75 YSKKALNEIFANARKICGNNPLGANILYAIND-YGRVLRDSCEAGANIIITGAGLPTNMP 133
+ + + E+ K + P G ++L A D + E GA+ + G G+P
Sbjct: 52 FIRAQMREV-----KSLTDKPFGVDLLAATPDALTASVEVIIEEGASSFVAGLGVP---- 102
Query: 134 EFAKDFSDVALIPIISSAKA----LKILCKRWSDRYKRIP---DAFIVEGPLSGGHQGFK 186
+PII KA + ++C K DA I +G GGH G
Sbjct: 103 -----------LPIIERLKAAGLKVMVVCGAVKHAVKAEQAGCDAVICQGGEGGGHTGL- 150
Query: 187 YEDCFKEEFRLENLVPKVVEASKEWGNIPIIAAGGIWDRKDIDTMLSLGASGVQMATRFL 246
LV + VEA K IP++AAGG+ D + + L+LGA GV M TRF+
Sbjct: 151 --------VGTLPLVAQAVEAVK----IPVVAAGGLHDGRGLAAALALGAQGVWMGTRFI 198
Query: 247 GTKECDA-KVYADLLPTLKKEDILLIKSPVGYPAR 280
+ E A +Y + ED + + G P R
Sbjct: 199 ASHEAHAGDLYRQAVVEAADEDTVRTRCYSGKPMR 233
>ref|NP_070998.1| (NC_000917) 2-nitropropane dioxygenase (ncd2) [Archaeoglobus
fulgidus]
pir||E69521 2-nitropropane dioxygenase (ncd2) homolog - Archaeoglobus fulgidus
gb|AAB89081.1| (AE000955) 2-nitropropane dioxygenase (ncd2) [Archaeoglobus
fulgidus]
Length = 274
Score = 67.0 bits (162), Expect = 3e-10
Identities = 65/236 (27%), Positives = 95/236 (39%), Gaps = 45/236 (19%)
Query: 16 KFPIFQGGMGVGISWDELAGNVAKEGALGVISAVGTGYYKNMRFVERIVAKKPFEALNFY 75
K+PI QG M GI+ E A V++ G LGVI++ G K +E++ +
Sbjct: 11 KYPIVQGPMA-GITLGEFASTVSEAGGLGVIASAGLSPEKLKEEIEKVKNRT-------- 61
Query: 76 SKKALNEIFANARKICGNNPLGANILYAINDYGRVLRDSCEAGANIIITGAGLPTNMPEF 135
+ P NI + L + +A II T AG P E
Sbjct: 62 -----------------DKPFAVNIPIYQPGSEKNLETALKADVGIIYTSAGSPEKYTER 104
Query: 136 AKDFSDVALIPIISSAKALKILCKRWSDRYKRIPDAFIVEGPLSGGHQGFKYEDCFKEEF 195
K+ + + + LK K DA + G +GG G F
Sbjct: 105 VKESGAKVIHKVSRLKEGLKA--------EKAGVDAVVAMGFEAGGIIGRSGVTSFC--- 153
Query: 196 RLENLVPKVVEASKEWGNIPIIAAGGIWDRKDIDTMLSLGASGVQMATRFLGTKEC 251
L+P++ + +IP++AAGGI D + L LGA GV++ TR L TKEC
Sbjct: 154 ----LIPELADNL----SIPVVAAGGIADERGFAAALILGAEGVEIGTRLLATKEC 201
>ref|NP_241076.1| (NC_002570) BH02210~unknown conserved protein [Bacillus halodurans]
dbj|BAB03929.1| (AP001507) BH02210~unknown conserved protein [Bacillus halodurans]
Length = 315
Score = 65.9 bits (159), Expect = 7e-10
Identities = 70/270 (25%), Positives = 106/270 (38%), Gaps = 49/270 (18%)
Query: 18 PIFQGGMGVGISWDELAGNVAKEGALGVISAVGTGYYKNM-RFVERIVAKKPFEALNFYS 76
P QGGMG +S LA V+K G LG I VGT + M + ++ + K P
Sbjct: 13 PFIQGGMG-NVSHVSLAVAVSKAGGLGTIG-VGTMEIEKMEQMIKEMHEKTP-------- 62
Query: 77 KKALNEIFANARKICGNNPLGANILYAIN-DYGRVLRDSCEAGANIIITGAGLPTNMPEF 135
+P N+ + D V+ + ++ AG P F
Sbjct: 63 -----------------HPFAVNVPINVRPDLEAVISLIKDLHVPVVSLSAGNPAPFIPF 105
Query: 136 AKDFSDVALIPIISSAKALKILCKRWSDRYKRIPDAFIVEGPLSGGHQGFKYEDCFKEEF 195
KD + + + +ALK + D + EG + G EE
Sbjct: 106 FKDAGTKVICVVANVKQALKA--------EQHGADVIVAEGFEAAGLNS-------SEEL 150
Query: 196 RLENLVPKVVEASKEWGNIPIIAAGGIWDRKDIDTMLSLGASGVQMATRFLGTKECDA-K 254
L+P++ +A +P+IAAGG+ + + LSLGA GVQM TR + TKE
Sbjct: 151 TTFTLIPQIAKAV----TVPLIAAGGVGNGAGLLAALSLGAQGVQMGTRLIATKEAQVHD 206
Query: 255 VYADLLPTLKKEDILLIKSPVGYPARAINT 284
Y L D +++ G+ R +NT
Sbjct: 207 SYKQALKEASANDTIIVGRSYGHRRRLLNT 236
>ref|NP_420381.1| (NC_002696) conserved hypothetical protein [Caulobacter crescentus
CB15]
gb|AAK23549.1| (AE005831) conserved hypothetical protein [Caulobacter crescentus
CB15]
Length = 311
Score = 64.7 bits (156), Expect = 2e-09
Identities = 80/346 (23%), Positives = 132/346 (38%), Gaps = 69/346 (19%)
Query: 16 KFPIFQGGMGVGISWDELAGNVAKEGALGVISAVGTGYYKNMRFVERIVAKKPFEALNFY 75
K+PI Q MG I+ +LA V++ G LG+I +G +N +
Sbjct: 12 KYPIIQAPMG-WIARYQLASAVSRAGGLGIIET-SSGETENCK----------------- 52
Query: 76 SKKALNEIFANARKICGNN-PLGANILYAINDYGRVLRDSCEAGANIIITGAGLPTNMPE 134
A K+ + P G N+ +LR C++G + T AG P
Sbjct: 53 ---------AEITKMAQSGLPFGVNLPIMFLRDDAMLRFVCDSGVKFVTTSAGSPAKFIG 103
Query: 135 FAKDFSDVALIPIISSAKALKILCKRWSDRYKRIPDAFIVEGPLSGGHQGFKYEDCFKEE 194
KD V + + A+K + + D +VEG GG FK
Sbjct: 104 PLKDAGIVVYHAVPTVDAAVKCV--------EAGVDGLVVEGAEGGG---------FKNP 146
Query: 195 FRLENLVPKVVEASKEWGNIPIIAAGGIWDRKDIDTMLSLGASGVQMATRFLGTKECDA- 253
+ LV +++A +E ++P++AAGGI D + + +LGA VQM TRF+ + E
Sbjct: 147 EEVSTLV--LLQAIREKVDVPLVAAGGICDGRGMAAAFALGAEAVQMGTRFVSSAESPVH 204
Query: 254 KVYADLLPTLKKEDILLIKSPVGYPARAINTGVIKRIEEGNAPKIACVSNCVAPCNRGEE 313
Y + K+ ++ RAI + + K I + + N
Sbjct: 205 DNYKAAITGAKETGTWVLNKKASPCIRAIKSELTKEIHDAGVMPPDVLKNI--------- 255
Query: 314 AKKVGYCIADGLGRSYLGNREEGLYFTGANGYRVDKIISVHELIKE 359
LG + G+ E G ++++ S H++I E
Sbjct: 256 -----------LGVYFGGDMEAAPALAGQTVGLINEVKSAHDIIDE 290
>ref|NP_371444.1| (NC_002758) hypothetical protein [Staphylococcus aureus subsp.
aureus Mu50]
dbj|BAB57082.1| (AP003360) hypothetical protein [Staphylococcus aureus subsp.
aureus Mu50]
Length = 355
Score = 64.3 bits (155), Expect = 2e-09
Identities = 46/135 (34%), Positives = 75/135 (55%), Gaps = 16/135 (11%)
Query: 170 DAFIVEGPLSGGHQGFKYEDCFKEEFRLE-----NLVPKVVEASKEWGNIPIIAAGGIWD 224
DA + +G +GGH+G K + +L +LVP++V+ +IP+IAAGGI D
Sbjct: 170 DAIVAQGSEAGGHRG----SFLKPKNQLPMVGTISLVPQIVDVV----SIPVIAAGGIMD 221
Query: 225 RKDIDTMLSLGASGVQMATRFLGTKECDA-KVYADLLPTLKKEDILLIKSPVGYPARAIN 283
+ + + LGA GVQM T FL +++ +A ++ D + K+ D ++ K+ G AR IN
Sbjct: 222 GRGVLASIVLGAEGVQMGTAFLTSQDSNASELLRDAIINSKETDTVVTKAFSGKLARGIN 281
Query: 284 TGVIKRIE--EGNAP 296
I+ + EG+ P
Sbjct: 282 NRFIEEMSQYEGDIP 296
>ref|NP_645620.1| (NC_003923) ORFID:MW0803~hypothetical protein, similar to
2-nitropropane dioxygenase [Staphylococcus aureus subsp.
aureus MW2]
dbj|BAB94668.1| (AP004824) ORFID:MW0803~hypothetical protein, similar to
2-nitropropane dioxygenase [Staphylococcus aureus subsp.
aureus MW2]
Length = 355
Score = 64.3 bits (155), Expect = 2e-09
Identities = 46/135 (34%), Positives = 75/135 (55%), Gaps = 16/135 (11%)
Query: 170 DAFIVEGPLSGGHQGFKYEDCFKEEFRLE-----NLVPKVVEASKEWGNIPIIAAGGIWD 224
DA + +G +GGH+G K + +L +LVP++V+ +IP+IAAGGI D
Sbjct: 170 DAIVAQGSEAGGHRG----SFLKPKNQLPMVGTISLVPQIVDVV----SIPVIAAGGIMD 221
Query: 225 RKDIDTMLSLGASGVQMATRFLGTKECDA-KVYADLLPTLKKEDILLIKSPVGYPARAIN 283
+ + + LGA GVQM T FL +++ +A ++ D + K+ D ++ K+ G AR IN
Sbjct: 222 GRGVLASIVLGAEGVQMGTAFLTSQDSNASELLRDAIINSKETDTVVTKAFSGKLARGIN 281
Query: 284 TGVIKRIE--EGNAP 296
I+ + EG+ P
Sbjct: 282 NRFIEEMSQYEGDIP 296
>ref|NP_374042.1| (NC_002745) hypothetical protein, similar to 2-nitropropane
dioxygenase [Staphylococcus aureus subsp. aureus N315]
dbj|BAB42020.1| (AP003131) ORFID:SA0781~hypothetical protein, similar to
2-nitropropane dioxygenase [Staphylococcus aureus subsp.
aureus N315]
Length = 355
Score = 64.3 bits (155), Expect = 2e-09
Identities = 46/135 (34%), Positives = 75/135 (55%), Gaps = 16/135 (11%)
Query: 170 DAFIVEGPLSGGHQGFKYEDCFKEEFRLE-----NLVPKVVEASKEWGNIPIIAAGGIWD 224
DA + +G +GGH+G K + +L +LVP++V+ +IP+IAAGGI D
Sbjct: 170 DAIVAQGSEAGGHRG----SFLKPKNQLPMVGTISLVPQIVDVV----SIPVIAAGGIMD 221
Query: 225 RKDIDTMLSLGASGVQMATRFLGTKECDA-KVYADLLPTLKKEDILLIKSPVGYPARAIN 283
+ + + LGA GVQM T FL +++ +A ++ D + K+ D ++ K+ G AR IN
Sbjct: 222 GRGVLASIVLGAEGVQMGTAFLTSQDSNASELLRDAIINSKETDTVVTKAFSGKLARGIN 281
Query: 284 TGVIKRIE--EGNAP 296
I+ + EG+ P
Sbjct: 282 NRFIEEMSQYEGDIP 296
>gb|AAG10471.1|AF279106_33 (AF279106) predicted 2-nitropropane dioxygenase [uncultured
proteobacterium EBAC31A08]
Length = 322
Score = 62.0 bits (149), Expect = 1e-08
Identities = 73/288 (25%), Positives = 121/288 (41%), Gaps = 59/288 (20%)
Query: 15 IKFPIFQGGMGVGISWDELAGNVAKEGALGVISAVGTGYYKNMRFVERIVAKKPFEALNF 74
I+ PI QGGM + + ELA V+ G LG I+ + G
Sbjct: 11 IEHPIIQGGMH-HVGFAELAAAVSNAGGLGTITGLTQGT--------------------- 48
Query: 75 YSKKALNEIFANARKICGNNPLGANILYAIN----DYGRVLRDSCEAGANIIITGAGLPT 130
+K NEI A +++ N P N+ + + DY +++ +AG ++ T P
Sbjct: 49 -PEKLANEI-ARCKEMT-NKPFAVNLTFLPSLTPPDYPGLIKVIIDAGVPVVETAGRNPA 105
Query: 131 NMPEFAKDFSDVALIPIIS---SAKALKILCKRWSDRYKRIPDAFIVEGPLSGGHQGFKY 187
K+ + S S KA I C DA V+G GGH G
Sbjct: 106 EYLPALKEAGIKVIHKCTSVRHSLKAQAIGC-----------DAVSVDGFECGGHPG--- 151
Query: 188 EDCFKEEFRLENLVPKVVEASKEWGNIPIIAAGGIWDRKDIDTMLSLGASGVQMATRFLG 247
+++ L+P+ + + IP +A+GG+ D + + +SLGA G+ M TRF+
Sbjct: 152 ----EDDIPNFILLPRAADELE----IPFVASGGMADGRSLVAAMSLGAEGMNMGTRFIA 203
Query: 248 TKECDAKVYADL---LPTLKKEDILLIKSPVGYPARAINTGVIKRIEE 292
T+ DA V+ ++ + + D LI + R +N ++R+ E
Sbjct: 204 TQ--DAPVHQNVKEAIVNASELDTRLIMRSLTNTERVLNNEAVERLIE 249
>ref|NP_218070.1| (NC_000962) hypothetical protein Rv3553 [Mycobacterium tuberculosis
H37Rv]
pir||B70678 hypothetical protein Rv3553 - Mycobacterium tuberculosis (strain
H37RV)
emb|CAB05054.1| (Z82098) hypothetical protein Rv3553 [Mycobacterium tuberculosis
H37Rv]
Length = 355
Score = 60.1 bits (144), Expect = 4e-08
Identities = 71/283 (25%), Positives = 112/283 (39%), Gaps = 49/283 (17%)
Query: 15 IKFPIFQGGMGVGISWDELAGNVAKEGALGVISAVGTGYYKNMRFVERIVAKKPFEALNF 74
I+ P+ Q GMG ++ L A G LG++++
Sbjct: 13 IEHPVVQTGMG-WVAGARLVSATANAGGLGILAS-------------------------- 45
Query: 75 YSKKALNEIFANARKICG--NNPLGANILYAINDYGRVLRDSCEAGANIIITGAGLPTNM 132
+ L+E+ A K+ + P G NI D G + G + +
Sbjct: 46 -ATMTLDELAAAITKVKAVTDKPFGVNIRADAADAGDRVELMIREGVRVASFALAPKQQL 104
Query: 133 PEFAKDFSDVALIPIISSAKALKILCKRWSDRYKRIPDAFIVEGPLSGGHQGFKYEDCFK 192
K+ V +IP I +AK + + W DA IV+G GGH G
Sbjct: 105 IARLKEAGAV-VIPSIGAAKHARKVAA-WG------ADAMIVQGGEGGGHTG-------- 148
Query: 193 EEFRLENLVPKVVEASKEWGNIPIIAAGGIWDRKDIDTMLSLGASGVQMATRFLGTKECD 252
L+P V++A G IP+IAAGG +D + + L GA+GV M TRFL T +
Sbjct: 149 -PVATTLLLPSVLDAVAGTG-IPVIAAGGFFDGRGLAAALCYGAAGVAMGTRFLLTSDST 206
Query: 253 AKVYADLLPTLKKEDILLIKSPV-GYPARAINTGVIKRIEEGN 294
D ++ + V G P R + T +++++E G+
Sbjct: 207 VPDAVKRRYLQAGLDGTVVTTRVDGMPHRVLRTELVEKLESGS 249
>ref|NP_338203.1| (NC_002755) conserved hypothetical protein [Mycobacterium
tuberculosis CDC1551]
gb|AAK48017.1| (AE007167) conserved hypothetical protein [Mycobacterium
tuberculosis CDC1551]
Length = 360
Score = 60.1 bits (144), Expect = 4e-08
Identities = 71/283 (25%), Positives = 112/283 (39%), Gaps = 49/283 (17%)
Query: 15 IKFPIFQGGMGVGISWDELAGNVAKEGALGVISAVGTGYYKNMRFVERIVAKKPFEALNF 74
I+ P+ Q GMG ++ L A G LG++++
Sbjct: 18 IEHPVVQTGMG-WVAGARLVSATANAGGLGILAS-------------------------- 50
Query: 75 YSKKALNEIFANARKICG--NNPLGANILYAINDYGRVLRDSCEAGANIIITGAGLPTNM 132
+ L+E+ A K+ + P G NI D G + G + +
Sbjct: 51 -ATMTLDELAAAITKVKAVTDKPFGVNIRADAADAGDRVELMIREGVRVASFALAPKQQL 109
Query: 133 PEFAKDFSDVALIPIISSAKALKILCKRWSDRYKRIPDAFIVEGPLSGGHQGFKYEDCFK 192
K+ V +IP I +AK + + W DA IV+G GGH G
Sbjct: 110 IARLKEAGAV-VIPSIGAAKHARKVAA-WG------ADAMIVQGGEGGGHTG-------- 153
Query: 193 EEFRLENLVPKVVEASKEWGNIPIIAAGGIWDRKDIDTMLSLGASGVQMATRFLGTKECD 252
L+P V++A G IP+IAAGG +D + + L GA+GV M TRFL T +
Sbjct: 154 -PVATTLLLPSVLDAVAGTG-IPVIAAGGFFDGRGLAAALCYGAAGVAMGTRFLLTSDST 211
Query: 253 AKVYADLLPTLKKEDILLIKSPV-GYPARAINTGVIKRIEEGN 294
D ++ + V G P R + T +++++E G+
Sbjct: 212 VPDAVKRRYLQAGLDGTVVTTRVDGMPHRVLRTELVEKLESGS 254
>gb|EAA02031.1| (AAAB01002180) ebiP355 [Anopheles gambiae str. PEST]
Length = 333
Score = 59.7 bits (143), Expect = 5e-08
Identities = 40/123 (32%), Positives = 61/123 (49%), Gaps = 5/123 (4%)
Query: 170 DAFIVEGPLSGGHQGFKYEDCFKEEFRLENLVPKVVEASKEWGNIPIIAAGGIWDRKDID 229
DA + +G +GGH+G D L LV ++ +A NIP+IA+GG++D++ I
Sbjct: 160 DAIVAQGIEAGGHRGSFLNDKCLPYIGLIALVTQIKDAV----NIPVIASGGLYDKRTIA 215
Query: 230 TMLSLGASGVQMATRFLGTKECDA-KVYADLLPTLKKEDILLIKSPVGYPARAINTGVIK 288
+GA VQ+ + F+ E A VY DL+ +L +S G AR I +K
Sbjct: 216 AAFDMGADAVQIGSHFISAAESAATDVYRDLIKESTDTSTVLTRSYTGRWARGICNDFMK 275
Query: 289 RIE 291
E
Sbjct: 276 LTE 278
>ref|NP_641625.1| (NC_003919) 2-nitropropane dioxygenase [Xanthomonas axonopodis pv.
citri str. 306]
gb|AAM36161.1| (AE011759) 2-nitropropane dioxygenase [Xanthomonas axonopodis pv.
citri str. 306]
Length = 357
Score = 58.2 bits (139), Expect = 1e-07
Identities = 43/129 (33%), Positives = 66/129 (50%), Gaps = 6/129 (4%)
Query: 170 DAFIVEGPLSGGHQG-FKYEDCFKEEFRLENLVPKVVEASKEWGNIPIIAAGGIWDRKDI 228
DA + +G +GGH+G F+ ++ L L+P++V+ +IP+IAAGGI D + I
Sbjct: 172 DAVVAQGAEAGGHRGAFEAGRAAQQMTGLLALLPRLVDRL----DIPVIAAGGIADARGI 227
Query: 229 DTMLSLGASGVQMATRFLGTKECD-AKVYADLLPTLKKEDILLIKSPVGYPARAINTGVI 287
L+LGAS VQ+ T L T E +AD L + E ++ G RA+ T +
Sbjct: 228 AAALTLGASAVQIGTGLLRTPEAALPSAWADALSQAEPEHTQPTRAFSGRLGRALTTPYV 287
Query: 288 KRIEEGNAP 296
+AP
Sbjct: 288 GAANAADAP 296
>ref|NP_521868.1| (NC_003296) PROBABLE OXIDOREDUCTASE PROTEIN [Ralstonia
solanacearum]
emb|CAD17458.1| (AL646077) PROBABLE OXIDOREDUCTASE PROTEIN [Ralstonia solanacearum]
Length = 362
Score = 57.4 bits (137), Expect = 3e-07
Identities = 40/141 (28%), Positives = 66/141 (46%), Gaps = 7/141 (4%)
Query: 170 DAFIVEGPLSGGHQGFKYEDCFKEEFRLENLVPKVVEASKEWGNIPIIAAGGIWDRKDID 229
DA I +G +GGH+G + + LVP+V +A + +P+IA GG+ D + +
Sbjct: 174 DAVIAQGAEAGGHRGMFLATAVESQVGTFALVPQVADAVR----VPVIATGGVADARGMA 229
Query: 230 TMLSLGASGVQMATRFLGTKEC-DAKVYADLLPTLKKEDILLIKSPVGYPARAINTGVIK 288
+LGA+GVQ+ T ++ + E + ++ L D L G PAR I +++
Sbjct: 230 AAFALGAAGVQIGTAYMLSPEAKTSAIHRAALKRAADGDTALTNLFTGRPARGIVNRLMR 289
Query: 289 RI--EEGNAPKIACVSNCVAP 307
I AP +AP
Sbjct: 290 EIGPMSSFAPAFPTAGGALAP 310
>ref|NP_636571.1| (NC_003902) 2-nitropropane dioxygenase [Xanthomonas campestris pv.
campestris str. ATCC 33913]
gb|AAM40495.1| (AE012219) 2-nitropropane dioxygenase [Xanthomonas campestris pv.
campestris str. ATCC 33913]
Length = 364
Score = 56.6 bits (135), Expect = 4e-07
Identities = 42/129 (32%), Positives = 66/129 (50%), Gaps = 6/129 (4%)
Query: 170 DAFIVEGPLSGGHQG-FKYEDCFKEEFRLENLVPKVVEASKEWGNIPIIAAGGIWDRKDI 228
DA + +G +GGH+G F ++ L L+P++V+ + IP+IAAGGI D + I
Sbjct: 179 DAVVAQGAEAGGHRGAFDASQAERQMTGLFALLPRLVDHLE----IPVIAAGGIADARGI 234
Query: 229 DTMLSLGASGVQMATRFLGTKECDAK-VYADLLPTLKKEDILLIKSPVGYPARAINTGVI 287
L+LGAS VQ+ T L T E +A+ L + E ++ G R+I T +
Sbjct: 235 AAALTLGASAVQIGTGLLRTPEAALPGAWANALAATEPEQTWPTRAFSGRLGRSIATAYV 294
Query: 288 KRIEEGNAP 296
+ +AP
Sbjct: 295 RAAAAVDAP 303
>gb|AAG02412.1| (AF284037) putative 2-nitropropane dioxygenase [Streptomyces
ansochromogenes]
Length = 363
Score = 54.7 bits (130), Expect = 2e-06
Identities = 65/249 (26%), Positives = 108/249 (43%), Gaps = 25/249 (10%)
Query: 18 PIFQGGMGVGISWDELAGNVAKEGALGVISA---VGTGYYKNMRFVERIVAKKPFEALNF 74
PI Q M G+S +LA V + G G ++A G Y+ ++ + R + +PF F
Sbjct: 12 PIVQAPMAGGVSVPQLAAAVCEAGGSGFLAAGYKTADGMYQEIKRL-RGLTGRPFGVNVF 70
Query: 75 YSKKALNEIFANARKICGNNPLGANILY---AINDYGRVLRDSCEAGANIIITGAGLPTN 131
+ L E + R+ P G + + D D +A +++ P
Sbjct: 71 MPQPELAE---SGRRRGLRPPAGRRGAWYETELGDPDGGRDDGYDAKLAVLLDD---PVP 124
Query: 132 MPEFAKDFSDVALIPIISSAKALKILCKRWSDRYKRI----PDAFIVEGPLSGGHQGFKY 187
+ F D +I + A L ++ + + + DA I +G +GGHQG +
Sbjct: 125 VVSFHFGVPDREVIARLRRAGTLTLVTATTPEEARAVEAAGADAVIAQGVEAGGHQG-TH 183
Query: 188 EDCFKEE---FRLENLVPKVVEASKEWGNIPIIAAGGIWDRKDIDTMLSLGASGVQMATR 244
D +++ L +L+ +V EA +IP++AAGGI I +L+ GA Q+ T
Sbjct: 184 RDSSEDDGAGIGLLSLLAQVREAV----DIPVVAAGGIMRGGQIAAVLAAGADAAQLGTA 239
Query: 245 FLGTKECDA 253
FL T E A
Sbjct: 240 FLATDESGA 248
>ref|NP_012683.1| (NC_001142) Hypothetical ORF; Yjr149wp [Saccharomyces cerevisiae]
sp|P47177|YJ9N_YEAST HYPOTHETICAL 45.1 KD PROTEIN IN BAT2-DAL5 INTERGENIC REGION
pir||S57178 2-nitropropane dioxygenase homolog YJR149w - yeast (Saccharomyces
cerevisiae)
emb|CAA89682.1| (Z49649) ORF YJR149w [Saccharomyces cerevisiae]
Length = 404
Score = 53.9 bits (128), Expect = 3e-06
Identities = 43/131 (32%), Positives = 66/131 (49%), Gaps = 12/131 (9%)
Query: 170 DAFIVEGPLSGGHQGFKYEDCFKEEFRLEN--LVPKVVEASKEWGNIP-------IIAAG 220
+ + +G +GGH+G + K++ L LV + V+ E N +IAAG
Sbjct: 212 NGIVCQGYEAGGHRGNFLVNDPKDDENLSTVQLVKRTVDELAEMKNKGLIHATPFVIAAG 271
Query: 221 GIWDRKDIDTMLSLGASGVQMATRFLGTKECDA-KVYADLLPTLKKEDILLIKSPVGYPA 279
GI D KDI MLS A VQ+ T FLG E +A K ++ P ++ ++ G PA
Sbjct: 272 GIMDSKDISYMLSQQADAVQVGTAFLGCSESNASKNFSS--PFTRETTTKMVNIISGKPA 329
Query: 280 RAINTGVIKRI 290
R I+T I+++
Sbjct: 330 RTISTPFIEKV 340
>ref|NP_421784.1| (NC_002696) conserved hypothetical protein [Caulobacter crescentus
CB15]
gb|AAK24952.1| (AE005962) conserved hypothetical protein [Caulobacter crescentus
CB15]
Length = 325
Score = 53.9 bits (128), Expect = 3e-06
Identities = 80/317 (25%), Positives = 129/317 (40%), Gaps = 63/317 (19%)
Query: 15 IKFPIFQGGMGVGISWDELAGNVAKEGALGVISAVGTGYYKNMRFVERIVAKKPFEALNF 74
++ PI QGGM + EL VA GALG ++A L
Sbjct: 13 VEHPIAQGGMQ-WVGKAELVSAVANAGALGFLTA-----------------------LTQ 48
Query: 75 YSKKALNEIFANARKICGNNPLGAN--ILYAIND--YGRVLRDSCEAGANIIITGAGLPT 130
+ +AL++ A R++ + P G N IL A+ Y E+G I+ T P
Sbjct: 49 PTPEALSKEIARTREMT-DKPFGVNLTILPAMTPPPYAEYRAAIIESGIKIVETAGYKPQ 107
Query: 131 NMPEFAKDFSDVALIPIISSAKALKILCKRWSDRY-----KRIPDAFIVEGPLSGGHQGF 185
+ K A +K++ K + R+ + DA ++G GH G
Sbjct: 108 EHVDHFK-------------ANGVKVIHKCTAVRHALSAERMGVDAISIDGFECAGHPG- 153
Query: 186 KYEDCFKEEFRLENLVPKVVEASKEWGNIPIIAAGGIWDRKDIDTMLSLGASGVQMATRF 245
E + L+ ++ A+ + IP++A+GGI D + + L+LGA GV M TRF
Sbjct: 154 --------EDDIPGLI--LIAAAADKVKIPMLASGGIADARGLVAALALGADGVNMGTRF 203
Query: 246 LGTKECDAKV-YADLLPTLKKEDILLIKSPVGYPARAINTGV---IKRIEEGNAPKIACV 301
T+E + + + + + LI + AR + V + +IE K V
Sbjct: 204 CVTQEAPIPMAFKEQMVANDERQTDLIFRTLHNTARVMRNAVSQEVVQIERAGGAKFEDV 263
Query: 302 SNCVAPCNRGEEAKKVG 318
++ VA RG +A G
Sbjct: 264 AHLVAG-TRGRDALAQG 279
>ref|NP_626791.1| (NC_003888) putative oxidoreductase [Streptomyces coelicolor A3(2)]
emb|CAB66231.1| (AL136503) putative oxidoreductase [Streptomyces coelicolor A3(2)]
Length = 364
Score = 52.8 bits (125), Expect = 6e-06
Identities = 68/278 (24%), Positives = 114/278 (40%), Gaps = 22/278 (7%)
Query: 17 FPIFQGGMGVGISWDELAGNVAKEGALGVISA---VGTGYYKNMRFVERIVAKKPFEALN 73
+PI Q M G+S LA V++ G LG ++A G Y+ ++ + R + +PF
Sbjct: 11 YPIVQAPMAGGVSVPRLAAAVSEAGGLGFLAAGYKTADGMYQEIKQL-RGLTSRPFGVNL 69
Query: 74 FYSKKALNE---IFANARKICGN-----NPLGANILYAINDYGRVLRDSCEAGANIIITG 125
F + + + A ++ G LG + Y + + ++
Sbjct: 70 FLPQPETADPAAVDVYAHQLAGEAAWYETELGDPDCGRDDGYDTKVAVLLDNPVPVVSFH 129
Query: 126 AGLPTNMPEFAKDFSDVALIPIISSAKALKILCKRWSDRYKRIPDAFIVEGPLSGGHQGF 185
G+P+ E V ++ + A + S DA I +G +GGHQG
Sbjct: 130 FGVPSR--EVVDSLHRVGTFALVGATTADEARAVEQSGA-----DAVIAQGMEAGGHQGT 182
Query: 186 KYEDCFKEEFRLENLVPKVVEASKEWGNIPIIAAGGIWDRKDIDTMLSLGASGVQMATRF 245
++ E + +V +E ++PI+AAGGI I +L+ GAS Q+ T F
Sbjct: 183 HRDN--PETGGAGTGLLSLVAQVREAVSLPILAAGGIMRGGQIAAVLAAGASAAQLGTAF 240
Query: 246 LGTKECDA-KVYADLLPTLKKEDILLIKSPVGYPARAI 282
L T E A ++ L L ++ G PARA+
Sbjct: 241 LATSESGAHDLHKQALTNPLFVRTELTRAFSGRPARAL 278
>ref|NP_655271.1| (NC_003995) NPD, 2-nitropropane dioxygenase [Bacillus anthracis
A2012] [Bacillus anthracis str. A2012]
Length = 364
Score = 52.8 bits (125), Expect = 6e-06
Identities = 81/328 (24%), Positives = 131/328 (39%), Gaps = 51/328 (15%)
Query: 15 IKFPIFQGGMGVGISWDELAGNVAKEGALGVISAVGTGYYKNMRFVERI-----VAKKPF 69
IK+PI Q GM I+ +L V+ G LG + G GY + E I + KPF
Sbjct: 12 IKYPIIQAGMAGAITTPKLVAAVSNSGGLGTL---GAGYMSPEQIREAIYTIRELTDKPF 68
Query: 70 EALNFYSKKALNEIFANARKICGNNPLGANILYAIN-DYGRVLRDSCEAGAN-------- 120
+K E+ KI LG +L +N ++G + + +
Sbjct: 69 GVNLLLTK----EVQIEEEKI----NLGKGLLSGVNREFGIEEEEQLKLPKSYKEQFQVL 120
Query: 121 ----IIITGAGLPTNMPEFAKDF--SDVALIPIISSAKALKILCKRWSDRYKRIPDAFIV 174
+ + T E D S + +I + K+L + D +
Sbjct: 121 LEEKVPVVSFAFQTLEKEEINDLKRSGIKVIGTATHVAEAKVLAELGVD-------IIVG 173
Query: 175 EGPLSGGHQGF---KYEDCFKEEFRLENLVPKVVEASKEWGNIPIIAAGGIWDRKDIDTM 231
+G +GGH+G K +D F L +P++V A +IPI+A GG+ + + +
Sbjct: 174 QGSEAGGHRGTFIGKEQDAMIGTFAL---IPQLVAAVP---HIPIVAVGGVMNGQGLVAA 227
Query: 232 LSLGASGVQMATRFLGTKE-CDAKVYADLLPTLKKEDILLIKSPVGYPARAINTGVIKRI 290
+LGA VQM + FL ++E VY + + + ++ G AR I I++
Sbjct: 228 FTLGAEAVQMGSAFLTSEESITHDVYKEAVLHSTDTSTTVTRAFSGKYARGIRNEFIEKH 287
Query: 291 E--EGNAPKIACVSNCVAPCNRGEEAKK 316
E E P V N + R E AK+
Sbjct: 288 EGKEEGLPMYP-VQNVLTSKIRQEAAKQ 314
>ref|NP_249715.1| (NC_002516) hypothetical protein [Pseudomonas aeruginosa]
pir||A83519 hypothetical protein PA1024 [imported] - Pseudomonas aeruginosa
(strain PAO1)
gb|AAG04413.1|AE004534_11 (AE004534) hypothetical protein [Pseudomonas aeruginosa]
Length = 328
Score = 52.4 bits (124), Expect = 8e-06
Identities = 64/245 (26%), Positives = 98/245 (39%), Gaps = 56/245 (22%)
Query: 15 IKFPIFQGGMGVGISWDELAGNVAKEGALGVISAVGTGYYKNMRFVERIVAKKPFEALNF 74
++ PI QGGM + E+A VA G L +SA L
Sbjct: 14 VEHPIMQGGMQ-WVGRAEMAAAVANAGGLATLSA-----------------------LTQ 49
Query: 75 YSKKALNEIFANARKICGNNPLGANILYAIND----YGRVLRDSCEAGANIIITGAGLP- 129
S +AL A R++ + P G N+ Y EAG ++ T P
Sbjct: 50 PSPEALAAEIARCRELT-DRPFGVNLTLLPTQKPVPYAEYRAAIIEAGIRVVETAGNDPG 108
Query: 130 TNMPEFAKDFSDVALIPIISSAKALKILCKRWSDRYKRIP-DAFIVEGPLSGGHQGFKYE 188
++ EF + + +I A++ K +R+ DA ++G GH G
Sbjct: 109 EHIAEFRRHG-----VKVIHKCTAVRHALKA-----ERLGVDAVSIDGFECAGHPG---- 154
Query: 189 DCFKEEFRLENLVPKVV--EASKEWGNIPIIAAGGIWDRKDIDTMLSLGASGVQMATRFL 246
E+ +P +V A+ +PIIA+GG D + + L+LGA + M TRFL
Sbjct: 155 ---------EDDIPGLVLLPAAANRLRVPIIASGGFADGRGLVAALALGADAINMGTRFL 205
Query: 247 GTKEC 251
T+EC
Sbjct: 206 ATREC 210
>ref|NP_568988.1| (NM_125821) 2-nitropropane dioxygenase-like protein [Arabidopsis
thaliana]
gb|AAM63242.1| (AY086032) 2-nitropropane dioxygenase-like protein [Arabidopsis
thaliana]
Length = 293
Score = 52.0 bits (123), Expect = 1e-05
Identities = 36/81 (44%), Positives = 47/81 (57%), Gaps = 9/81 (11%)
Query: 170 DAFIVEGPLSGGHQGFKYEDCFKEEFRLENLVPKVVEASKEWGNIPIIAAGGIWDRKDID 229
DA IV+G +GGH K L +L+P+VV+ E +IP+IAAGGI D +
Sbjct: 90 DAIIVQGREAGGHVIGKDG--------LFSLLPRVVDLVGE-RDIPVIAAGGIVDGRGYV 140
Query: 230 TMLSLGASGVQMATRFLGTKE 250
LSLGA GV + TRF+ T E
Sbjct: 141 AALSLGAQGVCLGTRFVATHE 161
>dbj|BAB09856.1| (AB008268) 2-nitropropane dioxygenase-like protein [Arabidopsis
thaliana]
gb|AAK44141.1|AF370326_1 (AF370326) putative 2-nitropropane dioxygenase [Arabidopsis
thaliana]
gb|AAL34288.1| (AY063114) putative 2-nitropropane dioxygenase [Arabidopsis
thaliana]
Length = 333
Score = 52.0 bits (123), Expect = 1e-05
Identities = 36/81 (44%), Positives = 47/81 (57%), Gaps = 9/81 (11%)
Query: 170 DAFIVEGPLSGGHQGFKYEDCFKEEFRLENLVPKVVEASKEWGNIPIIAAGGIWDRKDID 229
DA IV+G +GGH K L +L+P+VV+ E +IP+IAAGGI D +
Sbjct: 130 DAIIVQGREAGGHVIGKDG--------LFSLLPRVVDLVGE-RDIPVIAAGGIVDGRGYV 180
Query: 230 TMLSLGASGVQMATRFLGTKE 250
LSLGA GV + TRF+ T E
Sbjct: 181 AALSLGAQGVCLGTRFVATHE 201
>ref|NP_216049.1| (NC_000962) hypothetical protein Rv1533 [Mycobacterium tuberculosis
H37Rv]
pir||B70500 hypothetical protein Rv1533 - Mycobacterium tuberculosis (strain
H37RV)
emb|CAB11595.1| (Z98943) hypothetical protein Rv1533 [Mycobacterium tuberculosis
H37Rv]
Length = 375
Score = 51.2 bits (121), Expect = 2e-05
Identities = 51/197 (25%), Positives = 80/197 (39%), Gaps = 25/197 (12%)
Query: 170 DAFIVEGPLSGGHQGFKYEDCFKEEFRLENLVPKVVEASKEWGNIPIIAAGGIWDRKDID 229
D + +G +GGH G E LVP+VV+A P++AAGGI + I
Sbjct: 185 DLIVAQGTEAGGHTG---------EVATMVLVPEVVDAVSP---TPVLAAGGIARGRQIA 232
Query: 230 TMLSLGASGVQMATRFLGTKECDA-KVYADLLPTLKKEDILLIKSPVGYPARAINTGVIK 288
L+LGA GV + +L T+E + V D D + +S G PAR + T
Sbjct: 233 AALALGAEGVWCGSVWLTTEEAETPPVVKDKFLAATSSDTVRSRSLTGKPARMLRTAWTD 292
Query: 289 RIEEGNAPKIACVSNCVAPCNRGEEAKKVG---YCIADGLGRSYLGNREEGLYFTGANGY 345
+ ++P P ++ V I G+ RE YF G
Sbjct: 293 EWDRPDSPD---------PLGMPLQSALVSDPQLRINQAAGQPGAKARELATYFVGQVVG 343
Query: 346 RVDKIISVHELIKELTE 362
+D++ S ++ ++ E
Sbjct: 344 SLDRVRSARSVVLDMVE 360
>ref|NP_390557.1| (NC_000964) similar to 2-nitropropane dioxygenase [Bacillus
subtilis]
pir||B69978 2-nitropropane dioxygenase homolog yrpB - Bacillus subtilis
gb|AAB80891.1| (U93875) 2-nitropropane dioxygenase [Bacillus subtilis]
emb|CAB14621.1| (Z99117) similar to 2-nitropropane dioxygenase [Bacillus subtilis]
Length = 347
Score = 51.2 bits (121), Expect = 2e-05
Identities = 58/251 (23%), Positives = 104/251 (41%), Gaps = 21/251 (8%)
Query: 12 KHTIKFPIFQGGMGVGISWDELAGNVAKEGALGVISAVGTGYYKNMRFVERI-----VAK 66
K ++ PI Q M GI+ LA V+ +GALG ++ +GY ++I +
Sbjct: 7 KFSLTKPIIQAPMAGGITKPRLASAVSNQGALG---SLASGYLTPDLLEQQIKEIFELTD 63
Query: 67 KPFEALNFYSKKALNEIFANARKICGNNPLG--ANILYAINDYGRVLRDSCEAGANIIIT 124
PF+ F +K N PL N ++ + + +
Sbjct: 64 APFQINVFVPLGLEMPPKDQIKKWKENIPLANQVNQFTSVQEEWDDFYQKIDLILKYKVK 123
Query: 125 GAGLPTNMP--EFAKDFSDVALIPIISSAKALKILCKRWSDRYKRIPDAFIVEGPLSGGH 182
++P + K+ I +++ + L +R D +++G +GGH
Sbjct: 124 ACSFTFDLPPEDAVKELKTAGCCLIGTASTVEEALLME-----ERGMDIVVLQGSEAGGH 178
Query: 183 QGFKYEDCFKEEFRLENLVPKVVEASKEWGNIPIIAAGGIWDRKDIDTMLSLGASGVQMA 242
+G + L L+P+ +A ++P+IAAGG+ D + + L+LGA GVQ+
Sbjct: 179 RGAFLPSKGESAVGLMALIPQAADAL----SVPVIAAGGMIDHRGVKAALTLGAQGVQIG 234
Query: 243 TRFLGTKECDA 253
+ FL E +A
Sbjct: 235 SAFLICHESNA 245
>pir||T49534 hypothetical protein B21J21.130 [imported] - Neurospora crassa
Length = 405
Score = 50.8 bits (120), Expect = 2e-05
Identities = 71/293 (24%), Positives = 109/293 (36%), Gaps = 36/293 (12%)
Query: 15 IKFPIFQGGMGVGISWDELAGNVAKEGALGVISAVGTGYYKNMRFVERIVAKKPFEALN- 73
I PIF GM V +LA V G LGV+ G Y +M + K + N
Sbjct: 43 INHPIFLAGMNVAAG-PKLAAAVTNAGGLGVLG--GINYTPDMLRDQIDELKSHLKDKNA 99
Query: 74 -FYSKKALNEIFANARKICGNNPLGANILYAINDYGRVLRDSCEAGANIIITGAGLPTNM 132
F L ++ NARK N Y ++ ++GA + ++ G+P
Sbjct: 100 PFGVDLLLPQVGGNARK--------TNYDYTKGKLNELIDIIIQSGAKLFVSAVGVPPKH 151
Query: 133 PEFAKDFSDVALIPIISSAKALKILCKRWSDRYKRIPDAFIVEGPLSGGHQGFKYEDCFK 192
+ + +I K +K D +G GGH G
Sbjct: 152 VVDKLHAHGIVYMNMIGHPKHVKKCLDLGVD-------IICAQGGEGGGHTG-------- 196
Query: 193 EEFRLENLVPKVVEASK------EWGNIPIIAAGGIWDRKDIDTMLSLGASGVQMATRFL 246
+ L+P VVEA K + ++AAGGI + + L +GAS V + TRF+
Sbjct: 197 -DIATTILIPAVVEACKGAISPLTKKEVLVVAAGGIHSGPLLASALMMGASAVWVGTRFV 255
Query: 247 GTKECDA-KVYADLLPTLKKEDILLIKSPVGYPARAINTGVIKRIEEGNAPKI 298
+E A + + + + T D + G P R I+ E A +I
Sbjct: 256 LCEEAGASEAHKEAVRTASFSDTIRTLIFTGRPLRVRKNPYIENWETERAQEI 308
>emb|CAB91335.2| (AL355929) conserved hypothetical protein [Neurospora crassa]
Length = 379
Score = 50.8 bits (120), Expect = 2e-05
Identities = 71/293 (24%), Positives = 109/293 (36%), Gaps = 36/293 (12%)
Query: 15 IKFPIFQGGMGVGISWDELAGNVAKEGALGVISAVGTGYYKNMRFVERIVAKKPFEALN- 73
I PIF GM V +LA V G LGV+ G Y +M + K + N
Sbjct: 17 INHPIFLAGMNVAAG-PKLAAAVTNAGGLGVLG--GINYTPDMLRDQIDELKSHLKDKNA 73
Query: 74 -FYSKKALNEIFANARKICGNNPLGANILYAINDYGRVLRDSCEAGANIIITGAGLPTNM 132
F L ++ NARK N Y ++ ++GA + ++ G+P
Sbjct: 74 PFGVDLLLPQVGGNARK--------TNYDYTKGKLNELIDIIIQSGAKLFVSAVGVPPKH 125
Query: 133 PEFAKDFSDVALIPIISSAKALKILCKRWSDRYKRIPDAFIVEGPLSGGHQGFKYEDCFK 192
+ + +I K +K D +G GGH G
Sbjct: 126 VVDKLHAHGIVYMNMIGHPKHVKKCLDLGVD-------IICAQGGEGGGHTG-------- 170
Query: 193 EEFRLENLVPKVVEASK------EWGNIPIIAAGGIWDRKDIDTMLSLGASGVQMATRFL 246
+ L+P VVEA K + ++AAGGI + + L +GAS V + TRF+
Sbjct: 171 -DIATTILIPAVVEACKGAISPLTKKEVLVVAAGGIHSGPLLASALMMGASAVWVGTRFV 229
Query: 247 GTKECDA-KVYADLLPTLKKEDILLIKSPVGYPARAINTGVIKRIEEGNAPKI 298
+E A + + + + T D + G P R I+ E A +I
Sbjct: 230 LCEEAGASEAHKEAVRTASFSDTIRTLIFTGRPLRVRKNPYIENWETERAQEI 282
>ref|NP_297414.1| (NC_002488) conserved hypothetical protein [Xylella fastidiosa
9a5c]
pir||G82846 conserved hypothetical protein XF0121 [imported] - Xylella
fastidiosa (strain 9a5c)
gb|AAF82934.1|AE003865_11 (AE003865) conserved hypothetical protein [Xylella fastidiosa 9a5c]
Length = 343
Score = 50.4 bits (119), Expect = 3e-05
Identities = 36/121 (29%), Positives = 56/121 (45%), Gaps = 5/121 (4%)
Query: 170 DAFIVEGPLSGGHQGFKYEDCFKEEFRLENLVPKVVEASKEWGNIPIIAAGGIWDRKDID 229
D +V+GP +GGH + +LV +V S+ +P+IAAGG+ +
Sbjct: 168 DGLVVQGPDAGGHSATYDPGRPFTPLKTVSLVRRVCAVSR----LPVIAAGGVDGPVMVR 223
Query: 230 TMLSLGASGVQMATRFLGTKECDA-KVYADLLPTLKKEDILLIKSPVGYPARAINTGVIK 288
+L GA V + T L TKE A +V+ D L + + + G PAR + G +
Sbjct: 224 ALLQAGAVAVAIGTLLLRTKESGATQVHKDALANPAYTETAITHAFTGRPARTLRNGFVN 283
Query: 289 R 289
R
Sbjct: 284 R 284
>ref|NP_252891.1| (NC_002516) hypothetical protein [Pseudomonas aeruginosa]
pir||F83121 hypothetical protein PA4202 [imported] - Pseudomonas aeruginosa
(strain PAO1)
gb|AAG07589.1|AE004836_8 (AE004836) hypothetical protein [Pseudomonas aeruginosa]
Length = 351
Score = 50.4 bits (119), Expect = 3e-05
Identities = 76/293 (25%), Positives = 121/293 (40%), Gaps = 48/293 (16%)
Query: 15 IKFPIFQGGMGVGISWDELAGNVAKEGALGVISAVGTGYYKNMRFVERI--VAKKPFEAL 72
I+ PI Q M +G+S LA V+ G LG I+ G+ K + + + KPF +
Sbjct: 11 IQQPIIQAPM-LGVSTPALAAAVSNAGGLGSIAITGSAAEKGRALIREVRGLTDKPFN-V 68
Query: 73 NFYSKKALNEIFANARKICGNNPLGANILYAINDYGRVLRDSCEAGA-------NIIITG 125
N + + A R A DY + L E GA NI ++
Sbjct: 69 NLFCHRPGQADPARER--------------AWLDYLKPL--FAEFGAEPPVRLKNIYLSF 112
Query: 126 AGLPTNMPEFAKDFSDVALI----PIISSAKALK------ILCKRWSDRYKRIP----DA 171
PT +P ++ P +AL+ ++C + + DA
Sbjct: 113 LEDPTLLPMLLEERPAAVSFHFGAPPRDQVRALQAVGIRVLVCATTPEEAALVEAAGADA 172
Query: 172 FIVEGPLSGGHQG-FKYEDCFKEEFRLENLVPKVVEASKEWGNIPIIAAGGIWDRKDIDT 230
+ +G +GGH+G F+ E + + + L + A++ G++P++AAGGI D + I
Sbjct: 173 VVAQGIEAGGHRGVFEPE---RGDAAIGTLALVRLLAAR--GSLPVVAAGGIMDGRGIRA 227
Query: 231 MLSLGASGVQMATRFLGTKECDAK-VYADLLPTLKKEDILLIKSPVGYPARAI 282
L LGAS VQM T F+ E A Y + L + L + G AR +
Sbjct: 228 ALELGASAVQMGTAFVLCPESSANAAYREALKGPRAARTALTVTMSGRSARGL 280
>gb|AAG42399.1|AF300471_2 (AF300471) trans-2-enoyl-ACP reductase II [Zymomonas mobilis]
Length = 329
Score = 48.9 bits (115), Expect = 9e-05
Identities = 30/84 (35%), Positives = 43/84 (50%), Gaps = 11/84 (13%)
Query: 170 DAFIVEGPLSGGHQGFKYEDCFKEEFRLENLVPKVVEASKEWGNIPIIAAGGIWDRKDID 229
DA ++EG +GGH G +E ++P + E +PI AGGI + I
Sbjct: 132 DALVIEGMEAGGHIGPVTTTVLAQE-----ILPALAE------KLPIFVAGGIGRGESIA 180
Query: 230 TMLSLGASGVQMATRFLGTKECDA 253
L +GA+GVQ+ TRF+ EC A
Sbjct: 181 AFLEMGAAGVQLGTRFVCATECIA 204
>ref|NP_217297.1| (NC_000962) hypothetical protein Rv2781c [Mycobacterium
tuberculosis H37Rv]
ref|NP_337356.1| (NC_002755) 2-nitropropane dioxygenase, putative [Mycobacterium
tuberculosis CDC1551]
pir||D70883 probable oxidoreductase - Mycobacterium tuberculosis (strain H37RV)
emb|CAA15576.1| (AL008967) hypothetical protein Rv2781c [Mycobacterium tuberculosis
H37Rv]
gb|AAK47170.1| (AE007111) 2-nitropropane dioxygenase, putative [Mycobacterium
tuberculosis CDC1551]
Length = 344
Score = 47.4 bits (111), Expect = 3e-04
Identities = 57/250 (22%), Positives = 100/250 (39%), Gaps = 27/250 (10%)
Query: 10 IGKHTIKFPIFQGGMGVGISWDELAGNVAKEGALGVISAVGTGYYKNMRFVERIVAKK-- 67
+G I PI M G S LA V+ G LG ++ GY R + I A +
Sbjct: 3 LGFWDIAVPIVGAPMAGGPSTPALAAAVSNAGGLGFVAG---GYLSADRLADDIAAARAA 59
Query: 68 ---PFEALNFYSKKALN-----EIFANARKICG---NNPLGANILYAINDYGRVLRDSCE 116
P A F + ++ E +A+ + + +G + +D+ R L +
Sbjct: 60 TTGPIGANLFVPQPSVADWAQLEYYADELEEVAEYYHTEVGQPVYGDDDDWVRKLEVVAD 119
Query: 117 AGANIIITGAGLPTNMPEFAKDFSDVALIPIISSAKALKILCKRWSDRYKRIPDAFIVEG 176
++ G P P+ + S + L+ I+ + D+ +V+G
Sbjct: 120 VRPEVVSFTFGAPP--PDVVQRLSALGLLVSITVTSVYEA-----GVAIAAGADSLVVQG 172
Query: 177 PLSGGHQGFKYEDCFKEEFRLENLVPKVVEASKEWGNIPIIAAGGIWDRKDIDTMLSLGA 236
P +GGH+G D L L+ ++ A ++P++AAGG+ +D+ +L GA
Sbjct: 173 PAAGGHRGTFAPDMEPGTESLHQLLDRIGSAH----DVPLVAAGGLGTAEDVAAVLRRGA 228
Query: 237 SGVQMATRFL 246
Q+ T L
Sbjct: 229 IAAQVGTALL 238
>ref|NP_214535.1| (NC_000962) hypothetical protein Rv0021c [Mycobacterium
tuberculosis H37Rv]
ref|NP_334432.1| (NC_002755) 2-nitropropane dioxygenase [Mycobacterium tuberculosis
CDC1551]
pir||C70700 hypothetical protein Rv0021c - Mycobacterium tuberculosis (strain
H37RV)
emb|CAB02441.1| (Z80233) hypothetical protein Rv0021c [Mycobacterium tuberculosis
H37Rv]
gb|AAK44246.1| (AE006916) 2-nitropropane dioxygenase [Mycobacterium tuberculosis
CDC1551]
Length = 322
Score = 46.2 bits (108), Expect = 6e-04
Identities = 30/82 (36%), Positives = 42/82 (50%), Gaps = 9/82 (10%)
Query: 170 DAFIVEGPLSGGHQGFKYEDCFKEEFRLENLVPKVVEASKEWG-NIPIIAAGGIWDRKDI 228
D + +G +GGH LVP++V+ G +IP+IAAGGI D + +
Sbjct: 132 DVLVAQGTEAGGHGHGPRSTL--------TLVPEIVDLVTARGTDIPVIAAGGIADGRGL 183
Query: 229 DTMLSLGASGVQMATRFLGTKE 250
L LGA+GV + TRF T E
Sbjct: 184 AAALMLGAAGVLVGTRFYATVE 205
>gb|AAM45325.1| (AC117080) HYPOTHETICAL 38.7 KDA PROTEIN [Dictyostelium discoideum]
Length = 406
Score = 45.4 bits (106), Expect = 0.001
Identities = 48/198 (24%), Positives = 84/198 (42%), Gaps = 21/198 (10%)
Query: 170 DAFIVEGPLSGGHQGFKYEDCFKE------EFRLENLVPKVVEASKEWGNIPIIAAGGIW 223
D +G +GGH+G + + L LV +++ K +PIIAAG I
Sbjct: 222 DIICAQGIEAGGHRGSFIQGDMNTSIDSLPQIALLPLVTSLLDNCK----VPIIAAGSIT 277
Query: 224 DRKDIDTMLSLGASGVQMATRFLGTKE-CDAKVYADLLPTLKKEDILLIKSPVGYPARAI 282
++ ID+++S+G +GVQ+ + F+ + E C + D + L +S G AR I
Sbjct: 278 NKSTIDSLISMGVAGVQIGSLFIASNESCAIDSWKDAIINSTDTSTSLTRSFSGRWARGI 337
Query: 283 NTGVIKRIEEGNAPKIACVSNCVAPCNRGEEAKKVGYCIADGLGRSYLGNREEGLYFTGA 342
++ + S + P E K I+ + N ++G
Sbjct: 338 KNQFMENFNNQEQQQ----SIKIPPYPIQNELTKPLRSISQKENNNQFTN-----LWSGQ 388
Query: 343 NGYRVDKIISVHELIKEL 360
GY+ K + + ++IKEL
Sbjct: 389 QGYK-SKKLPIEQIIKEL 405
>gb|AAF13746.1|AF117351_3 (AF117351) unknown [Zymomonas mobilis]
Length = 334
Score = 45.1 bits (105), Expect = 0.001
Identities = 23/51 (45%), Positives = 34/51 (66%), Gaps = 4/51 (7%)
Query: 200 LVPKVVEASKEWGNIPIIAAGGIWDRKDIDTMLSLGASGVQMATRFLGTKE 250
+VP +V+A +IP++A GGI DR+ + +LGA GV + TRF+ TKE
Sbjct: 186 VVPTMVDAV----DIPVMATGGINDRRGVKAAFALGAEGVYIGTRFIVTKE 232
>sp|Q12723|2NPD_WILMR 2-NITROPROPANE DIOXYGENASE (NITROALKANE OXIDASE) (2-NPD)
pir||S50891 2-nitropropane dioxygenase (EC 1.13.11.32) - yeast (Williopsis
mrakii)
gb|AAA64484.1| (U13900) 2-nitropropane dioxygenase [Williopsis saturnus]
Length = 374
Score = 45.1 bits (105), Expect = 0.001
Identities = 36/140 (25%), Positives = 66/140 (46%), Gaps = 4/140 (2%)
Query: 159 KRWSDRYKRIPDAFIVEGPLSGGHQG-FKYEDCFKEEFRLENLVPKVVEA--SKEWGNIP 215
+ + Y+ D +++G +GGH+G FK D + + +LV +V+ S N P
Sbjct: 174 QEFQQAYESKLDGVVLQGWEAGGHRGNFKANDVEDGQLKTLDLVSTIVDYIDSASISNPP 233
Query: 216 -IIAAGGIWDRKDIDTMLSLGASGVQMATRFLGTKECDAKVYADLLPTLKKEDILLIKSP 274
IIAAGGI D + I +L + VQ+ T +L + + + K D ++ +
Sbjct: 234 FIIAAGGIHDDESIKELLQFNIAAVQLGTVWLPSSQATISPEHLKMFQSPKSDTMMTAAI 293
Query: 275 VGYPARAINTGVIKRIEEGN 294
G R I+T ++ + + +
Sbjct: 294 SGRNLRTISTPFLRDLHQSS 313
>ref|NP_600164.1| (NC_003450) COG2070:Dioxygenases related to 2-nitropropane
dioxygenase [Corynebacterium glutamicum]
dbj|BAB98329.1| (AP005276) Dioxygenases related to 2-nitropropane dioxygenase
[Corynebacterium glutamicum ATCC 13032]
Length = 341
Score = 44.3 bits (103), Expect = 0.002
Identities = 39/132 (29%), Positives = 62/132 (46%), Gaps = 11/132 (8%)
Query: 170 DAFIVEGPLSGGHQGFKYEDCFKEEFRLENLVPKVVEASKEWGNIPIIAAGGIWDRKDID 229
+A +V+GP +GGH+ + +E L+ L+ V +A +P+IAAGG+ D+
Sbjct: 162 NALVVQGPEAGGHRSTWSIEVEPDERDLKTLLAAVKQAGVY---LPLIAAGGLSTSADVA 218
Query: 230 TMLSLGASGVQMATRFL-----GTKECDAKVYADLLPTLKKEDILLIKSPVGYPARAINT 284
+L GAS + FL GT + ++ D P L E + ++ G AR + T
Sbjct: 219 AILEAGASAASCGSAFLLSDEAGTSSLNREI-LDAAPALGLESV-SSRAFSGRYARGVET 276
Query: 285 GVIKRIEEGNAP 296
R EG P
Sbjct: 277 R-FTRSNEGLPP 287
>ref|NP_216410.1| (NC_000962) hypothetical protein Rv1894c [Mycobacterium
tuberculosis H37Rv]
ref|NP_336401.1| (NC_002755) conserved hypothetical protein [Mycobacterium
tuberculosis CDC1551]
pir||C70517 hypothetical protein Rv1894c - Mycobacterium tuberculosis (strain
H37RV)
emb|CAB10038.1| (Z97193) hypothetical protein Rv1894c [Mycobacterium tuberculosis
H37Rv]
gb|AAK46215.1| (AE007050) conserved hypothetical protein [Mycobacterium
tuberculosis CDC1551]
Length = 376
Score = 43.1 bits (100), Expect = 0.005
Identities = 43/155 (27%), Positives = 64/155 (40%), Gaps = 16/155 (10%)
Query: 147 IISSAKALKILCKRWSDRYKRIP---DAFIVEGPLSGGHQGFKYEDCFKEEFRLENLVPK 203
I S + + LC S K D I +G +GGH G E L P+
Sbjct: 161 IHDSGRKVAALCGSPSQARKHADAGVDIIIAQGGEAGGHCG---------EVGSIVLWPQ 211
Query: 204 VVEASKEWGNIPIIAAGGIWDRKDIDTMLSLGASGVQMATRFLGTKE-CDAKVYADLLPT 262
VV KE +P++AAGGI + I L+LG G +++L +E + V
Sbjct: 212 VV---KEVAPVPVLAAGGIGSGQQIAAALALGTQGAWTGSQWLMVEEAANTAVQQAAYVK 268
Query: 263 LKKEDILLIKSPVGYPARAINTGVIKRIEEGNAPK 297
D + +S G PAR + + E+ +PK
Sbjct: 269 ATSRDTVRSRSFTGKPARMLRNDWTEAWEQPESPK 303
Database: /home/scwang/download_20020708_db/nr
Posted date: Aug 7, 2002 12:55 PM
Number of letters in database: 324,149,939
Number of sequences in database: 1,026,957
Lambda K H
0.319 0.140 0.418
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 241,349,997
Number of Sequences: 1026957
Number of extensions: 10647470
Number of successful extensions: 20229
Number of sequences better than 1.0e-02: 62
Number of HSP's better than 0.0 without gapping: 32
Number of HSP's successfully gapped in prelim test: 30
Number of HSP's that attempted gapping in prelim test: 20093
Number of HSP's gapped (non-prelim): 72
length of query: 363
length of database: 324,149,939
effective HSP length: 122
effective length of query: 241
effective length of database: 198,861,185
effective search space: 47925545585
effective search space used: 47925545585
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 98 (42.4 bits)