BLASTP 2.2.1 [Apr-13-2001]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|15645428|ref|NP_207602.1| hypothetical protein
[Helicobacter pylori 26695]
         (183 letters)

Database: /home/scwang/download_20020708_db/nr
           1,026,957 sequences; 324,149,939 total letters

Searching..................................................done


                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

ref|NP_207602.1|  (NC_000915) hypothetical protein [Helicoba...   348  2e-95
ref|NP_223463.1|  (NC_000921) putative FLAGELLAR BIOSYNTHESI...   345  1e-94
ref|NP_282549.1|  (NC_002163) possible flagellar protein [Ca...   122  3e-27
ref|NP_214280.1|  (NC_000918) flagellar biosynthesis FliL [A...   100  1e-20
ref|NP_623049.1|  (NC_003869) Flagellar basal body-associate...    66  2e-10
ref|NP_389512.1|  (NC_000964) flagellar protein [Bacillus su...    65  4e-10
gb|AAD15906.1|  (AF069392) polar flagellar protein FliL [Vib...    63  2e-09
gb|AAA22445.1|  (M37691) ORF-A, 3' end [Bacillus subtilis]         58  4e-08
ref|NP_348770.1|  (NC_003030) Flagellar protein FliL [Clostr...    58  4e-08
ref|NP_231758.1|  (NC_002505) flagellar protein FliL, putati...    58  6e-08
ref|NP_521940.1|  (NC_003296) PROBABLE FLAGELLAR FLIL TRANSM...    50  9e-06
gb|AAD00576.1|  (U86075) FliL [Rhodobacter sphaeroides]            42  0.003
ref|NP_212413.1|  (NC_001318) flagellar protein (fliL) [Borr...    42  0.003
ref|NP_228486.1|  (NC_000853) flagellar protein, putative [T...    42  0.004
dbj|BAB62250.1|  (AB046578) orf [Treponema medium]                 41  0.006
>ref|NP_207602.1| (NC_000915) hypothetical protein [Helicobacter pylori 26695]
 pir||A64621 hypothetical protein HP0809 - Helicobacter pylori (strain 26695)
 gb|AAD07860.1| (AE000592) H. pylori predicted coding region HP0809 [Helicobacter
           pylori 26695]
          Length = 183

 Score =  348 bits (893), Expect = 2e-95
 Identities = 183/183 (100%), Positives = 183/183 (100%)

Query: 1   MAEEQENTAQQPPKKSKALLFVIIGSVLVMLLLVGVIIMLLMGNKEESKENASKNTQEVQ 60
           MAEEQENTAQQPPKKSKALLFVIIGSVLVMLLLVGVIIMLLMGNKEESKENASKNTQEVQ
Sbjct: 1   MAEEQENTAQQPPKKSKALLFVIIGSVLVMLLLVGVIIMLLMGNKEESKENASKNTQEVQ 60

Query: 61  ANPMANKNQEAKEGSNIQQYLVLGPLYAIDAPFAVNLVSQNGRRYLKASISLELSNEKLL 120
           ANPMANKNQEAKEGSNIQQYLVLGPLYAIDAPFAVNLVSQNGRRYLKASISLELSNEKLL
Sbjct: 61  ANPMANKNQEAKEGSNIQQYLVLGPLYAIDAPFAVNLVSQNGRRYLKASISLELSNEKLL 120

Query: 121 NEVKVKDTAIKDTIIEILSSKSVEEVVTNKGKNKLKDEIKSHLNSFLIDGFIKNVFFTDF 180
           NEVKVKDTAIKDTIIEILSSKSVEEVVTNKGKNKLKDEIKSHLNSFLIDGFIKNVFFTDF
Sbjct: 121 NEVKVKDTAIKDTIIEILSSKSVEEVVTNKGKNKLKDEIKSHLNSFLIDGFIKNVFFTDF 180

Query: 181 IIQ 183
           IIQ
Sbjct: 181 IIQ 183
>ref|NP_223463.1| (NC_000921) putative FLAGELLAR BIOSYNTHESIS PROTEIN [Helicobacter
           pylori J99]
 pir||H71894 probable flagellar biosynthesis protein - Helicobacter pylori
           (strain J99)
 gb|AAD06317.1| (AE001505) putative FLAGELLAR BIOSYNTHESIS PROTEIN [Helicobacter
           pylori J99]
          Length = 183

 Score =  345 bits (885), Expect = 1e-94
 Identities = 182/183 (99%), Positives = 182/183 (99%)

Query: 1   MAEEQENTAQQPPKKSKALLFVIIGSVLVMLLLVGVIIMLLMGNKEESKENASKNTQEVQ 60
           MAEEQENTAQQP KKSKALLFVIIGSVLVMLLLVGVIIMLLMGNKEESKENASKNTQEVQ
Sbjct: 1   MAEEQENTAQQPQKKSKALLFVIIGSVLVMLLLVGVIIMLLMGNKEESKENASKNTQEVQ 60

Query: 61  ANPMANKNQEAKEGSNIQQYLVLGPLYAIDAPFAVNLVSQNGRRYLKASISLELSNEKLL 120
           ANPMANKNQEAKEGSNIQQYLVLGPLYAIDAPFAVNLVSQNGRRYLKASISLELSNEKLL
Sbjct: 61  ANPMANKNQEAKEGSNIQQYLVLGPLYAIDAPFAVNLVSQNGRRYLKASISLELSNEKLL 120

Query: 121 NEVKVKDTAIKDTIIEILSSKSVEEVVTNKGKNKLKDEIKSHLNSFLIDGFIKNVFFTDF 180
           NEVKVKDTAIKDTIIEILSSKSVEEVVTNKGKNKLKDEIKSHLNSFLIDGFIKNVFFTDF
Sbjct: 121 NEVKVKDTAIKDTIIEILSSKSVEEVVTNKGKNKLKDEIKSHLNSFLIDGFIKNVFFTDF 180

Query: 181 IIQ 183
           IIQ
Sbjct: 181 IIQ 183
>ref|NP_282549.1| (NC_002163) possible flagellar protein [Campylobacter jejuni]
 pir||H81285 probable flagellar protein Cj1408 [imported] - Campylobacter jejuni
           (strain NCTC 11168)
 emb|CAB73832.1| (AL139078) possible flagellar protein [Campylobacter jejuni]
          Length = 178

 Score =  122 bits (305), Expect = 3e-27
 Identities = 68/182 (37%), Positives = 108/182 (58%), Gaps = 5/182 (2%)

Query: 1   MAEEQENTAQQPPKKSKALLFVIIGSVLVMLLLVGVIIMLLMGNKEESKENASKNTQEVQ 60
           M EE EN   +  K    ++ ++I   +++L ++GVI  L+  +  +  E      +E +
Sbjct: 1   MDEELENEETKKKKGGSLVIIIVILLFVLLLSIMGVIAWLISSSSSDESEVKEAPKEEAK 60

Query: 61  ANPMANKNQEAKEGSNIQQYLVLGPLYAIDAPFAVNLVSQNGRRYLKASISLELSNEKLL 120
           A+     +  A+ GS+      +GP+Y +D PF +NL+S +G RY+K +I LE ++E L 
Sbjct: 61  ADK-PKVSAPAQRGSDFAN---IGPMYPLD-PFTLNLLSDSGSRYVKCTIELEQNSELLK 115

Query: 121 NEVKVKDTAIKDTIIEILSSKSVEEVVTNKGKNKLKDEIKSHLNSFLIDGFIKNVFFTDF 180
            E+  K   I+D II  L++K+ EEV T KGK +LKDE+   +N  L DGFIKNV+FTDF
Sbjct: 116 PELDKKVPVIRDIIIRTLTAKTFEEVSTQKGKERLKDELVGKINEILTDGFIKNVYFTDF 175

Query: 181 II 182
           ++
Sbjct: 176 VV 177
>ref|NP_214280.1| (NC_000918) flagellar biosynthesis FliL [Aquifex aeolicus]
 sp|O67712|FLIL_AQUAE Flagellar fliL protein
 pir||F70460 flagellar biosynthesis FliL - Aquifex aeolicus
 gb|AAC07676.1| (AE000760) flagellar biosynthesis FliL [Aquifex aeolicus]
          Length = 161

 Score =  100 bits (248), Expect = 1e-20
 Identities = 63/186 (33%), Positives = 99/186 (52%), Gaps = 30/186 (16%)

Query: 1   MAEEQENTAQQPPKKSKALLFVIIGSVLVMLLLVGV---IIMLLMGNKEESKENASKNTQ 57
           MAEE    AQ    K K L+F++    L+++LL G        L   KEE KE  +    
Sbjct: 1   MAEEVREEAQAGGGKKK-LIFLL----LLLILLAGAGAGAYFFLFAKKEEKKEEKAPKVA 55

Query: 58  EVQANPMANKNQEAKEGSNIQQYLVLGPLYAIDAPFAVNLVSQNGRRYLKASISLELSNE 117
             +                      +G +Y +D PF VNL       Y + SI+LE++N+
Sbjct: 56  PPE----------------------VGIMYKLDPPFIVNLADPEATVYARISITLEVANQ 93

Query: 118 KLLNEVKVKDTAIKDTIIEILSSKSVEEVVTNKGKNKLKDEIKSHLNSFLIDGFIKNVFF 177
           ++L EV+ K+  I+D IIEI+SSK+  E+ T +G+ +LK E+   +N+ L +G ++NV+F
Sbjct: 94  QVLQEVQKKEPVIRDAIIEIISSKTSNEIRTPEGREQLKLEVLKRINTILSEGGVRNVYF 153

Query: 178 TDFIIQ 183
           T+F+IQ
Sbjct: 154 TEFVIQ 159
>ref|NP_623049.1| (NC_003869) Flagellar basal body-associated protein
           [Thermoanaerobacter tengcongensis]
 gb|AAM24653.1| (AE013101) Flagellar basal body-associated protein
           [Thermoanaerobacter tengcongensis]
          Length = 135

 Score = 66.2 bits (160), Expect = 2e-10
 Identities = 32/97 (32%), Positives = 60/97 (60%), Gaps = 2/97 (2%)

Query: 87  YAIDAPFAVNLVSQNGRRYLKASISLELSNEKLLNEVKVKDTAIKDTIIEILSSKSVEEV 146
           Y+    F  NL      +++K  + L++++ K+L +++     I+D II+IL SK+ +EV
Sbjct: 41  YSPGGEFITNLKGDG--KFIKVVVELQVTDPKVLKKLEENTPQIRDAIIQILRSKTAQEV 98

Query: 147 VTNKGKNKLKDEIKSHLNSFLIDGFIKNVFFTDFIIQ 183
              +G+  LK++IK+ +N  + +G + NV+F DFI+Q
Sbjct: 99  EGPQGQEMLKNDIKNEINKIIGEGKVVNVYFNDFIVQ 135
>ref|NP_389512.1| (NC_000964) flagellar protein [Bacillus subtilis]
 sp|P23452|FLIL_BACSU Flagellar fliL protein
 pir||A38845 flagellar protein required for flagellar formation fliL - Bacillus
           subtilis
 emb|CAA39529.1| (X56049) ORF 10 [Bacillus subtilis]
 emb|CAB13503.1| (Z99112) flagellar protein [Bacillus subtilis]
          Length = 140

 Score = 65.1 bits (157), Expect = 4e-10
 Identities = 41/167 (24%), Positives = 83/167 (49%), Gaps = 28/167 (16%)

Query: 17  KALLFVIIGSVLVMLLLVGVIIMLLMGNKEESKENASKNTQEVQANPMANKNQEAKEGSN 76
           K  L +I+  +L+++  +G     ++G K E  E A K+  E+ A+ +           +
Sbjct: 2   KKKLMIILLIILIVIGALGAAAYFVLGGKSEKSE-AKKSIDEIVASSV-----------D 49

Query: 77  IQQYLVLGPLYAIDAPFAVNLVSQNGRRYLKASISLELSNEKLLNEVKVKDTAIKDTIIE 136
           +++                NL S N    ++ +I LE  ++K   E++ +D  +KD +I 
Sbjct: 50  VEE-------------ITTNLKSDN---IIRLAIKLETDSDKSKEELEKRDFQVKDAVIS 93

Query: 137 ILSSKSVEEVVTNKGKNKLKDEIKSHLNSFLIDGFIKNVFFTDFIIQ 183
           +L+  + +++  +KGK   K E+K  +NS+L +G ++ V+ T F +Q
Sbjct: 94  LLADTNADQIEGDKGKETFKKELKDKINSYLQEGKVEKVYITSFNLQ 140
>gb|AAD15906.1| (AF069392) polar flagellar protein FliL [Vibrio parahaemolyticus]
          Length = 167

 Score = 62.8 bits (151), Expect = 2e-09
 Identities = 51/189 (26%), Positives = 88/189 (45%), Gaps = 28/189 (14%)

Query: 1   MAEEQENTAQQPPKKSKALLFVIIGSVLVMLLLVGVIIMLLMGNKEESK--ENASKNTQE 58
           MAEEQ   A  P  KSK L+ +I  +V+V+L   G     LMG+ + ++  E  S+ TQ 
Sbjct: 1   MAEEQLQGADAPKGKSKLLIIII--AVVVLLGGGGAAAFFLMGSDDSAQAAEAESQQTQA 58

Query: 59  VQANPMANKNQEAKEGSNIQQYLVLGPLYAIDAPFAVNLVSQNGRRYLKASISLELSNEK 118
             ANP+A  N                    +  PF  N+      R ++    L +   +
Sbjct: 59  AAANPIAYVN--------------------LPQPFIFNVTGDRRDRLVQIKAQLMVRGSE 98

Query: 119 LLNEVKVKDTAIKDTIIEILSSKSVEEVVTNKGKNKLKD----EIKSHLNSFLIDGFIKN 174
                +     ++ +++   +S +VE++ +  G+ +L+D    +IK+ LN+ +    I+ 
Sbjct: 99  NEQLARYHSPLVESSLLSTFASATVEQLRSPTGRVELRDRASEDIKAALNAAVGKPVIEK 158

Query: 175 VFFTDFIIQ 183
           V FTDF+IQ
Sbjct: 159 VLFTDFVIQ 167
>gb|AAA22445.1| (M37691) ORF-A, 3' end [Bacillus subtilis]
          Length = 84

 Score = 58.2 bits (139), Expect = 4e-08
 Identities = 24/78 (30%), Positives = 49/78 (62%)

Query: 106 LKASISLELSNEKLLNEVKVKDTAIKDTIIEILSSKSVEEVVTNKGKNKLKDEIKSHLNS 165
           ++ +I LE  ++K   E++ +D  +KD +I +L+  + +++  +KGK   K E+K  +NS
Sbjct: 7   IRLAIKLETDSDKSKEELEKRDFQVKDAVISLLADTNADQIEGDKGKETFKKELKDKINS 66

Query: 166 FLIDGFIKNVFFTDFIIQ 183
           +L +G ++ V+ T F +Q
Sbjct: 67  YLQEGKVEKVYITSFNLQ 84
>ref|NP_348770.1| (NC_003030) Flagellar protein FliL [Clostridium acetobutylicum]
 gb|AAK80110.1|AE007715_15 (AE007715) Flagellar protein FliL [Clostridium acetobutylicum]
          Length = 171

 Score = 58.2 bits (139), Expect = 4e-08
 Identities = 47/190 (24%), Positives = 93/190 (48%), Gaps = 27/190 (14%)

Query: 1   MAEEQENTAQQPPKKSKALLFVIIGSVLVMLLLVGVIIMLLMGNKEESKENASKNTQEVQ 60
           M+E++++  ++   KSK ++ +++  V++++ +   +    + +K   K   S NT    
Sbjct: 1   MSEKKKDKGEKGGGKSKIIIILLM--VIIVVFIAAALAYFFVFSK---KSPTSTNTTATN 55

Query: 61  ANPMANKNQEAKEGSNIQQYLVLGPLYAIDAPFAVNLVSQNGRRYLKASISLELS--NEK 118
           A      N E    S  ++ L              NL   +G +Y+K ++++  S  N K
Sbjct: 56  AATTTEANVEENTYS-FEEILT-------------NLADTDGAKYIKVTVAVGYSSKNSK 101

Query: 119 LLNEVK-----VKDTAIKDTIIEILSSKSVEEVVTNKGKNKLKDEIKSHLNSFLIDGFIK 173
           L  E++     +K   ++D I+ +L SK   +  T  G +++K EIK  +N  L +G I 
Sbjct: 102 LKEELEDTKEDIKTPIMRDIIVNVLRSKKAADF-TPTGIDQMKKEIKEGINPHLKNGQID 160

Query: 174 NVFFTDFIIQ 183
           NV+F++ +IQ
Sbjct: 161 NVYFSNLVIQ 170
>ref|NP_231758.1| (NC_002505) flagellar protein FliL, putative [Vibrio cholerae]
 pir||A82117 probable flagellar protein FliL VC2127 [imported] - Vibrio cholerae
           (group O1 strain N16961)
 gb|AAF95272.1| (AE004285) flagellar protein FliL, putative [Vibrio cholerae]
          Length = 167

 Score = 57.8 bits (138), Expect = 6e-08
 Identities = 46/189 (24%), Positives = 87/189 (45%), Gaps = 28/189 (14%)

Query: 1   MAEEQENTAQQPPKKSKALLFVIIGSVLVMLLLVGVIIMLLMGNKEESKENASKNTQEVQ 60
           MAEE   T  + PK  K LL +II +V+++    G    ++    +E+  +A + T++V 
Sbjct: 1   MAEEDLGT--EAPKGKKKLLIIIIAAVVLLAGGGGAAFFMMGSGGDEAAADAEQKTEQVA 58

Query: 61  A--NPMANKNQEAKEGSNIQQYLVLGPLYAIDAPFAVNLVSQNGRRYLKASISLELSNEK 118
           A  +P++  N                    I  PF  N+      R ++  + L +   +
Sbjct: 59  APTDPVSYVN--------------------IAQPFVFNVTGDAKDRLVQIKVQLMVRGSE 98

Query: 119 LLNEVKVKDTAIKDTIIEILSSKSVEEVVTNKG----KNKLKDEIKSHLNSFLIDGFIKN 174
             N  +     ++ +++   +S +VE++ T  G    ++K  D+IK+ LN  +    I+ 
Sbjct: 99  NENLARYHSPLVESSLLATFASATVEQLRTPNGRIELRDKATDDIKAALNQAVGKPVIEK 158

Query: 175 VFFTDFIIQ 183
           V FTDF++Q
Sbjct: 159 VLFTDFVMQ 167
>ref|NP_521940.1| (NC_003296) PROBABLE FLAGELLAR FLIL TRANSMEMBRANE PROTEIN
           [Ralstonia solanacearum]
 emb|CAD17530.1| (AL646078) PROBABLE FLAGELLAR FLIL TRANSMEMBRANE PROTEIN [Ralstonia
           solanacearum]
          Length = 164

 Score = 50.4 bits (119), Expect = 9e-06
 Identities = 46/182 (25%), Positives = 78/182 (42%), Gaps = 30/182 (16%)

Query: 7   NTAQQPPKKSKALLFVIIGSVLVMLLLVGVIIMLLMGNKEESKENASKNTQEVQANPMAN 66
           NTA  P K     L +II  VLV++ + G      +G    +            A P A 
Sbjct: 8   NTAPAPAKGGSTKLLLIILIVLVLIGMGGAAAWFFLGGGSHA------------AGPAAP 55

Query: 67  KNQEAKEGSNIQQYLVLGPLYAIDAPFAVNLVSQNGR-RYLKASISLELSNEKLLNEVKV 125
              +              P++       VNL  + G  RYL+ +I+ +  N+    E+K 
Sbjct: 56  PKPKE-------------PVFVPMETLTVNLQPEEGNDRYLQIAITFKSYNKHAEEEIKS 102

Query: 126 KDTAIKDTIIEILSSKSVEEVVTNKGKNKLKDEI----KSHLNSFLIDGFIKNVFFTDFI 181
               ++  ++ +LSSK+  E+ +N+GK KL  EI    +    +   +  + +V FT+F+
Sbjct: 103 YTPELRSRVLMLLSSKAPAELYSNEGKAKLAKEIVEQCEQAYKAVGKESPVVDVLFTNFV 162

Query: 182 IQ 183
           IQ
Sbjct: 163 IQ 164
>gb|AAD00576.1| (U86075) FliL [Rhodobacter sphaeroides]
          Length = 189

 Score = 42.4 bits (98), Expect = 0.003
 Identities = 31/102 (30%), Positives = 57/102 (55%), Gaps = 8/102 (7%)

Query: 87  YAIDAPFAVNLVSQNGRRYLKASISLELS-NEKLLNEVKVKDTAIKDTIIEILSSKSVEE 145
           Y    P   NL  +  RR L+A I L    ++K+++ V   + A++  ++ I+ + S EE
Sbjct: 91  YQFKEPLTTNL--RASRRLLQAGIGLSTQYDQKVMDNVARNEVALRSDMLAIVGTFSEEE 148

Query: 146 VVTNKGKNKLKDEIKSHLNSFL--IDGF--IKNVFFTDFIIQ 183
           +    G+++L  E++  +N+ L  ++GF  I+ VFF  FI+Q
Sbjct: 149 LQDKAGRDRLA-ELRGAVNARLQQLEGFGGIEAVFFPSFILQ 189
>ref|NP_212413.1| (NC_001318) flagellar protein (fliL) [Borrelia burgdorferi]
 sp|Q57442|FLIL_BORBU Flagellar fliL protein
 pir||G70134 flagellar protein (fliL) homolog - Lyme disease spirochete
 gb|AAA85603.1| (U43739) orf25; Method: conceptual translation supplied by author
           [Borrelia burgdorferi]
 gb|AAB58964.1| (L75945) flagellar protein [Borrelia burgdorferi]
 gb|AAC66669.1| (AE001137) flagellar protein (fliL) [Borrelia burgdorferi]
          Length = 178

 Score = 42.4 bits (98), Expect = 0.003
 Identities = 24/77 (31%), Positives = 44/77 (56%), Gaps = 3/77 (3%)

Query: 106 LKASISLELSNEKLLNEVKVKDTAIKDTIIEILSSKSVEEVVTNKGKNKLKDEIKSHLNS 165
           +K ++    +N  +LNE+  +   +KD I E  S ++ +E+   K ++++K EIK+ +NS
Sbjct: 102 VKLALGYAENNVNILNELGRQKVRLKDIIREYFSQRTGQEI---KNESQIKAEIKARINS 158

Query: 166 FLIDGFIKNVFFTDFII 182
            L +G IK +  T   I
Sbjct: 159 ILRNGEIKEIALTQIDI 175
>ref|NP_228486.1| (NC_000853) flagellar protein, putative [Thermotoga maritima]
 pir||D72347 hypothetical protein TM0678 - Thermotoga maritima (strain MSB8)
 gb|AAD35761.1|AE001740_7 (AE001740) flagellar protein, putative [Thermotoga maritima]
          Length = 169

 Score = 41.6 bits (96), Expect = 0.004
 Identities = 42/174 (24%), Positives = 75/174 (42%), Gaps = 29/174 (16%)

Query: 1   MAEEQENTAQQPPKKSKALLFVIIGSVLVMLLLVGVIIMLLMGNKEESKENASKNTQEVQ 60
           MAEE+    +QP ++  A L   I   LV+ + V  ++ + +G+      N  K  + V 
Sbjct: 1   MAEEERREEEQPKRRMGASLITSIVVPLVVSVAVYFLLPMFLGS------NQGKQGENVP 54

Query: 61  ANPMANKNQEAKEGSNIQQYLVLG--PLYAIDAPFAVNLVSQNGRRYLKASISLELSNEK 118
           + P+  K    ++G N Q +L+ G   +  ID                  S+S  + ++ 
Sbjct: 55  STPVRIKAVLIQQGEN-QTFLLKGGRDVVVID------------------SLSFSVGSDA 95

Query: 119 LLNEVKVKDTAIKDTIIEILSSKSVEEVVTNKGKNKLKDEIKSHLNSFLIDGFI 172
               +  +   I D ++ I  SK   E+ T  G   LK +I+  +N+  I GF+
Sbjct: 96  CRAAIAERKDEIMDALMMIFLSKDKSELSTVPGLELLKRQIRDAVNT--ITGFV 147
>dbj|BAB62250.1| (AB046578) orf [Treponema medium]
          Length = 160

 Score = 41.2 bits (95), Expect = 0.006
 Identities = 39/166 (23%), Positives = 78/166 (46%), Gaps = 19/166 (11%)

Query: 20  LFVIIGSVLVMLLLVGVIIMLLMGNKEESKENASKNTQEVQANPMANKNQEAKEGSNIQQ 79
           LF ++ S++++L+ + ++I  ++   +++KE AS+   E  A   A    +         
Sbjct: 9   LFKLLRSIIIVLIAI-IVIGTVIAFVKKTKERASERQNEEPAGGAAYIPPK-----EYAL 62

Query: 80  YLVLGPLYAIDA---PFAVNLVSQNGRRYLKASISLELSNEKLLNEVKVKDTAIKDTIIE 136
           Y  LG L A+ A   P  V          LK  +  + S+     E+  K  A+K +I++
Sbjct: 63  YGDLGQLRAVTADNPPITV---------ILKPFLEYKASDTAFQEELVAKKDALKKSILD 113

Query: 137 ILSSKSVEEVVTNKGKNKLKDEIKSHLNSFLIDGFIKNVFFTDFII 182
             S +S   + +   ++ +K  +   +N  L+ G I N++F +F+I
Sbjct: 114 WFSLESAYRLSSELPQD-IKQTLMERINKQLVLGKIHNIYFEEFVI 158
  Database: /home/scwang/download_20020708_db/nr
    Posted date:  Aug 7, 2002 12:55 PM
  Number of letters in database: 324,149,939
  Number of sequences in database:  1,026,957
  
Lambda     K      H
   0.313    0.131    0.337 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 99,687,368
Number of Sequences: 1026957
Number of extensions: 3603827
Number of successful extensions: 14564
Number of sequences better than 1.0e-02: 15
Number of HSP's better than  0.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 8
Number of HSP's that attempted gapping in prelim test: 14548
Number of HSP's gapped (non-prelim): 15
length of query: 183
length of database: 324,149,939
effective HSP length: 114
effective length of query: 69
effective length of database: 207,076,841
effective search space: 14288302029
effective search space used: 14288302029
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 93 (40.4 bits)