BLASTP 2.2.1 [Apr-13-2001]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|15645442|ref|NP_207616.1| conserved hypothetical
protein [Helicobacter pylori 26695]
         (114 letters)

Database: /home/scwang/download_20020708_db/nr
           1,026,957 sequences; 324,149,939 total letters

Searching..................................................done


                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

ref|NP_207616.1|  (NC_000915) conserved hypothetical protein...   232  7e-61
ref|NP_223480.1|  (NC_000921) putative [Helicobacter pylori ...   230  2e-60
ref|NP_281359.1|  (NC_002163) hypothetical protein Cj0148c [...    94  2e-19
ref|NP_213017.1|  (NC_000918) putative protein [Aquifex aeol...    65  2e-10
ref|NP_275077.1|  (NC_003112) conserved hypothetical protein...    64  4e-10
ref|NP_283173.1|  (NC_003116) hypothetical protein NMA0341 [...    64  4e-10
ref|NP_228067.1|  (NC_000853) conserved hypothetical protein...    62  9e-10
ref|NP_562621.1|  (NC_003366) conserved hypothetical protein...    54  4e-07
ref|NP_348389.1|  (NC_003030) Predicted endonuclease [Clostr...    51  2e-06
ref|NP_230231.1|  (NC_002505) conserved hypothetical protein...    49  1e-05
ref|NP_623070.1|  (NC_003869) predicted endonuclease distant...    49  1e-05
ref|NP_604267.1|  (NC_003454) Endonuclease [Fusobacterium nu...    46  7e-05
ref|NP_253114.1|  (NC_002516) conserved hypothetical protein...    43  8e-04
ref|NP_663135.1|  (NC_002932) conserved hypothetical protein...    43  8e-04
ref|NP_540686.1|  (NC_003317) ENDONUCLEASE [Brucella meliten...    42  0.001
ref|NP_296003.1|  (NC_001263) conserved hypothetical protein...    42  0.002
ref|NP_614518.1|  (NC_003551) Predicted endonuclease of the ...    40  0.004
ref|NP_245584.1|  (NC_002663) unknown [Pasteurella multocida...    39  0.008
ref|NP_521384.1|  (NC_003295) CONSERVED HYPOTHETICAL PROTEIN...    39  0.008
>ref|NP_207616.1| (NC_000915) conserved hypothetical protein [Helicobacter pylori
           26695]
 pir||G64622 conserved hypothetical protein HP0823 - Helicobacter pylori
           (strain 26695)
 gb|AAD07870.1| (AE000593) conserved hypothetical protein [Helicobacter pylori
           26695]
          Length = 114

 Score =  232 bits (591), Expect = 7e-61
 Identities = 114/114 (100%), Positives = 114/114 (100%)

Query: 1   MRFLNNKHREKGLKAEEEACGFLKSLGFEMVERNFFSQFGEIDIIALKKGVLHFIEVKSG 60
           MRFLNNKHREKGLKAEEEACGFLKSLGFEMVERNFFSQFGEIDIIALKKGVLHFIEVKSG
Sbjct: 1   MRFLNNKHREKGLKAEEEACGFLKSLGFEMVERNFFSQFGEIDIIALKKGVLHFIEVKSG 60

Query: 61  ENFDPIYAITPSKLKKMIKTIRCYLSQKDPNSDFCIDALIVKNGKFELLENITF 114
           ENFDPIYAITPSKLKKMIKTIRCYLSQKDPNSDFCIDALIVKNGKFELLENITF
Sbjct: 61  ENFDPIYAITPSKLKKMIKTIRCYLSQKDPNSDFCIDALIVKNGKFELLENITF 114
>ref|NP_223480.1| (NC_000921) putative [Helicobacter pylori J99]
 pir||D71893 hypothetical protein jhp0762 - Helicobacter pylori (strain J99)
 gb|AAD06328.1| (AE001506) putative [Helicobacter pylori J99]
          Length = 114

 Score =  230 bits (587), Expect = 2e-60
 Identities = 112/114 (98%), Positives = 114/114 (99%)

Query: 1   MRFLNNKHREKGLKAEEEACGFLKSLGFEMVERNFFSQFGEIDIIALKKGVLHFIEVKSG 60
           MRFLNNKHREKGLKAEEEACGFLK+LGFEM+ERNFFSQFGEIDIIALKKGVLHFIEVKSG
Sbjct: 1   MRFLNNKHREKGLKAEEEACGFLKTLGFEMIERNFFSQFGEIDIIALKKGVLHFIEVKSG 60

Query: 61  ENFDPIYAITPSKLKKMIKTIRCYLSQKDPNSDFCIDALIVKNGKFELLENITF 114
           ENFDPIYAITPSKLKKMIKTIRCYLSQKDPNSDFCIDALIVKNGKFELLENITF
Sbjct: 61  ENFDPIYAITPSKLKKMIKTIRCYLSQKDPNSDFCIDALIVKNGKFELLENITF 114
>ref|NP_281359.1| (NC_002163) hypothetical protein Cj0148c [Campylobacter jejuni]
 pir||D81432 hypothetical protein Cj0148c [imported] - Campylobacter jejuni
           (strain NCTC 11168)
 emb|CAB72632.1| (AL139074) hypothetical protein Cj0148c [Campylobacter jejuni]
          Length = 112

 Score = 94.4 bits (233), Expect = 2e-19
 Identities = 49/104 (47%), Positives = 70/104 (67%), Gaps = 1/104 (0%)

Query: 12  GLKAEEEACGFLKSLGFEMVERNFFSQFGEIDIIALKKGVLHFIEVKSGEN-FDPIYAIT 70
           G+  E++AC FLK  GFE+++RNF S+FGEIDIIA K  +LHFIEVK  +N ++    + 
Sbjct: 9   GILGEDKACKFLKKQGFEILKRNFHSKFGEIDIIAKKDEILHFIEVKFTQNDYEVSERLD 68

Query: 71  PSKLKKMIKTIRCYLSQKDPNSDFCIDALIVKNGKFELLENITF 114
             KL+K++KTI  Y  +   +SDF ID + +KN   +  ENI+F
Sbjct: 69  RKKLEKILKTIEFYHLKNGISSDFQIDLICIKNDVIQFCENISF 112
>ref|NP_213017.1| (NC_000918) putative protein [Aquifex aeolicus]
 sp|O66457|Y041_AQUAE Hypothetical protein AQ_041
 pir||F70303 hypothetical protein aq_041 - Aquifex aeolicus
 gb|AAC06429.1| (AE000671) putative protein [Aquifex aeolicus]
          Length = 103

 Score = 64.7 bits (156), Expect = 2e-10
 Identities = 37/95 (38%), Positives = 56/95 (58%), Gaps = 4/95 (4%)

Query: 11  KGLKAEEEACGFLKSLGFEMVERNFFSQFGEIDIIALKKGVLHFIEVKSGENFDPIYAIT 70
           KG + E+ A  +LKS G++++ RN  S +GEIDI+A  +G    +EVK  E F P   +T
Sbjct: 2   KGREYEDLAARYLKSKGYQILGRNLRSPYGEIDILAEFEGRKVIVEVKGSETFFPAEKVT 61

Query: 71  PSKLKKMIKTIRCYLSQKDPNSDFCIDALIVKNGK 105
           P KL K+I+T    L ++     F I+ ++V  GK
Sbjct: 62  PHKLSKIIRTAYEVLGEE----PFSIEVVVVYRGK 92
>ref|NP_275077.1| (NC_003112) conserved hypothetical protein [Neisseria meningitidis
           MC58]
 pir||G81007 conserved hypothetical protein NMB2089 [imported] - Neisseria
           meningitidis (group B strain MD58)
 gb|AAF42406.1| (AE002558) conserved hypothetical protein [Neisseria meningitidis
           MC58]
          Length = 115

 Score = 63.5 bits (153), Expect = 4e-10
 Identities = 42/115 (36%), Positives = 70/115 (60%), Gaps = 8/115 (6%)

Query: 4   LNNKHREKGLKAEEEACGFLKSLGFEMVERNFFSQFGEIDIIALKKGVLHFIEVKSGEN- 62
           LN+K  E G   E+ A  FL+S G  ++ RN+   +GEID+I    G++ F+EVK  +N 
Sbjct: 3   LNHKQGEAG---EDAALAFLQSQGCTLLARNWHCAYGEIDLIVKNGGMILFVEVKYRKNR 59

Query: 63  -FDPI-YAITPSKLKKMIKTIRCYLSQKDPNSDFC-IDALIVKNGK-FELLENIT 113
            F  + Y+I+PSKL K+ +++  YL Q    +  C +DA++++  +  E ++NIT
Sbjct: 60  QFGGVAYSISPSKLLKLQRSVEYYLQQNRLTNVPCRLDAVLIEGSRPPEWIQNIT 114
>ref|NP_283173.1| (NC_003116) hypothetical protein NMA0341 [Neisseria meningitidis
           Z2491]
 pir||A82030 hypothetical protein NMA0341 [imported] - Neisseria meningitidis
           (group A strain Z2491)
 emb|CAB83644.1| (AL162752) hypothetical protein NMA0341 [Neisseria meningitidis
           Z2491]
          Length = 115

 Score = 63.5 bits (153), Expect = 4e-10
 Identities = 41/115 (35%), Positives = 68/115 (58%), Gaps = 8/115 (6%)

Query: 4   LNNKHREKGLKAEEEACGFLKSLGFEMVERNFFSQFGEIDIIALKKGVLHFIEVKSGENF 63
           LN+K  E G   E+ A  FL+S G  ++ RN+   +GEID+I    G++ F+EVK  +N 
Sbjct: 3   LNHKQGEAG---EDAALAFLQSQGCTLLARNWHCAYGEIDLIVKNGGMILFVEVKYRKNR 59

Query: 64  D---PIYAITPSKLKKMIKTIRCYLSQKDPNSDFC-IDALIVKNGK-FELLENIT 113
                 Y+I+PSKL K+ +++  YL Q    +  C +DA++++  +  E ++NIT
Sbjct: 60  QFGGAAYSISPSKLLKLQRSVEYYLQQNRLTNVPCRLDAVLIEGSRPPEWIQNIT 114
>ref|NP_228067.1| (NC_000853) conserved hypothetical protein [Thermotoga maritima]
 sp|Q9WY95|Y253_THEMA Hypothetical protein TM0253
 pir||F72399 conserved hypothetical protein - Thermotoga maritima (strain
          MSB8)
 gb|AAD35343.1|AE001708_11 (AE001708) conserved hypothetical protein [Thermotoga maritima]
          Length = 108

 Score = 62.4 bits (150), Expect = 9e-10
 Identities = 32/75 (42%), Positives = 50/75 (66%), Gaps = 1/75 (1%)

Query: 14 KAEEEACGFLKSLGFEMVERNFFSQFGEIDIIALKKGVLHFIEVKSGE-NFDPIYAITPS 72
          +AEE AC FLK  G++++ERN+ +++GEIDI+A     + F+EVKSG    DP+  I   
Sbjct: 6  EAEELACKFLKKKGYKILERNYRTKYGEIDIVARDGREIVFVEVKSGSGKVDPLERIDLK 65

Query: 73 KLKKMIKTIRCYLSQ 87
          K++ + +T R Y+ Q
Sbjct: 66 KVRNLEQTARFYMIQ 80
>ref|NP_562621.1| (NC_003366) conserved hypothetical protein [Clostridium
          perfringens]
 dbj|BAB81411.1| (AP003191) conserved hypothetical protein [Clostridium
          perfringens]
          Length = 122

 Score = 53.5 bits (127), Expect = 4e-07
 Identities = 31/80 (38%), Positives = 49/80 (60%), Gaps = 3/80 (3%)

Query: 12 GLKAEEEACGFLKSLGFEMVERNFFSQFGEIDIIALKKGVLHFIEVKS--GENF-DPIYA 68
          G   E+ +  FL+  G+ ++E+NF    GEIDIIA+K  ++ FIEVKS    +F +P  +
Sbjct: 9  GFYGEDLSVSFLEKEGYSILEKNFNCSSGEIDIIAIKDEIISFIEVKSRFSNSFGNPKES 68

Query: 69 ITPSKLKKMIKTIRCYLSQK 88
          +T SK +++I   + YL  K
Sbjct: 69 VTCSKQRRIINAAKYYLHIK 88
>ref|NP_348389.1| (NC_003030) Predicted endonuclease [Clostridium acetobutylicum]
 gb|AAK79729.1|AE007685_5 (AE007685) Predicted endonuclease [Clostridium acetobutylicum]
          Length = 122

 Score = 51.2 bits (121), Expect = 2e-06
 Identities = 39/115 (33%), Positives = 60/115 (51%), Gaps = 15/115 (13%)

Query: 1   MRFLNNKHREKGLKAEEEACGFLKSLGFEMVERNFFSQFGEIDIIALKKGVLHFIEVKS- 59
           M  LN K  + G KA E    +LK  G+ ++ RNF    GE+DIIA  K  + F+EVKS 
Sbjct: 1   MHRLNKKAGDYGEKAAEI---YLKKSGYTILNRNFRCFLGEVDIIAKNKDYITFVEVKSR 57

Query: 60  -GENFD-PIYAITPSKLKKMIKTIRCYLSQKDPNSDFCIDALIVKNGKFELLENI 112
             + +  P  A+   K  K+ +T + Y++ K         +LI  N +F+++E I
Sbjct: 58  WSDTYGLPCEAVNYRKKLKIYRTAKYYIASK---------SLINYNFRFDVIEVI 103
>ref|NP_230231.1| (NC_002505) conserved hypothetical protein [Vibrio cholerae]
 pir||A82306 conserved hypothetical protein VC0580 [imported] - Vibrio cholerae
           (group O1 strain N16961)
 gb|AAF93748.1| (AE004143) conserved hypothetical protein [Vibrio cholerae]
          Length = 122

 Score = 48.9 bits (115), Expect = 1e-05
 Identities = 32/107 (29%), Positives = 55/107 (50%), Gaps = 8/107 (7%)

Query: 1   MRFLNNKHREKGLKAEEEACGFLKSLGFEMVERNFFSQFGEIDIIALKKGVLHFIEVKSG 60
           M F+N++H+  G   E+ A  +L+  G  +V +N   +FGE+D+I      L F+EV+  
Sbjct: 1   MVFVNSRHQ--GNHYEQMAADYLRRQGLTLVTQNVNYRFGELDLIMRDGNTLVFVEVRYR 58

Query: 61  ENFDPIYA---ITPSKLKKMIKTIRCYLSQKDPNS---DFCIDALIV 101
            N    +A   +T +K  ++IK   C++     NS   DF  D + +
Sbjct: 59  NNTQHGHAAETVTRTKRARLIKAANCWMLANKMNSHSADFRFDVIAI 105
>ref|NP_623070.1| (NC_003869) predicted endonuclease distantly related to archaeal
          Holliday junction resolvase [Thermoanaerobacter
          tengcongensis]
 gb|AAM24674.1| (AE013104) predicted endonuclease distantly related to archaeal
          Holliday junction resolvase [Thermoanaerobacter
          tengcongensis]
          Length = 122

 Score = 48.5 bits (114), Expect = 1e-05
 Identities = 26/81 (32%), Positives = 48/81 (59%), Gaps = 3/81 (3%)

Query: 12 GLKAEEEACGFLKSLGFEMVERNFFSQFGEIDIIALKKGVLHFIEVKSGENFD---PIYA 68
          G   E+ A  +L   G++++E+NF  + GEID+IAL K  + F+EVK+  + +   P  A
Sbjct: 10 GSVGEKIAAQYLSKKGYKILEKNFKCKIGEIDLIALYKNQIVFVEVKTRTSVNFGLPSEA 69

Query: 69 ITPSKLKKMIKTIRCYLSQKD 89
          +   K +K++K  + Y++  +
Sbjct: 70 VDFHKQQKIVKIAQVYIASSN 90
>ref|NP_604267.1| (NC_003454) Endonuclease [Fusobacterium nucleatum subsp. nucleatum
           ATCC 25586]
 gb|AAL95566.1| (AE010641) Endonuclease [Fusobacterium nucleatum subsp. nucleatum
           ATCC 25586]
          Length = 119

 Score = 46.2 bits (108), Expect = 7e-05
 Identities = 33/110 (30%), Positives = 59/110 (53%), Gaps = 4/110 (3%)

Query: 9   REKGLKAEEEACGFLKSLGFEMVERNFFSQFGEIDIIALKKGVLHFIEVKSGENFDPIY- 67
           RE G + E+++   L    ++++ERN+ ++FGEIDIIA K   + FIEVK  +     Y 
Sbjct: 4   REIGNEYEDKSVEILVKEDYKILERNYQNKFGEIDIIAEKNKEIIFIEVKYRKTNKFGYG 63

Query: 68  --AITPSKLKKMIKTIRCYL-SQKDPNSDFCIDALIVKNGKFELLENITF 114
             A+   K+ K++K    Y+ S+K  +     D +     + + ++NI +
Sbjct: 64  YEAVDRRKIMKILKLANYYIQSKKYQDYKIRFDCMSYLGDELDWIKNIVW 113
>ref|NP_253114.1| (NC_002516) conserved hypothetical protein [Pseudomonas
          aeruginosa]
 pir||H83091 conserved hypothetical protein PA4424 [imported] - Pseudomonas
          aeruginosa (strain PAO1)
 gb|AAG07812.1|AE004857_3 (AE004857) conserved hypothetical protein [Pseudomonas
          aeruginosa]
          Length = 125

 Score = 42.7 bits (99), Expect = 8e-04
 Identities = 24/83 (28%), Positives = 46/83 (54%), Gaps = 3/83 (3%)

Query: 9  REKGLKAEEEACGFLKSLGFEMVERNFFSQFGEIDIIALKKGVLHFIEVKSGEN---FDP 65
          R+KG +AEE AC  L+  G   + +N+  + GE+D++ L    + F+EV+S  +      
Sbjct: 8  RDKGRQAEELACAHLRRQGLATLGKNWTCRRGELDLVMLDGDTVVFVEVRSRRHRAWGGA 67

Query: 66 IYAITPSKLKKMIKTIRCYLSQK 88
          + +I   K +++I +   +L Q+
Sbjct: 68 LESIDARKRQRLILSAELFLQQE 90
>ref|NP_663135.1| (NC_002932) conserved hypothetical protein [Chlorobium tepidum
          TLS]
 gb|AAM73477.1| (AE012971) conserved hypothetical protein [Chlorobium tepidum
          TLS]
          Length = 129

 Score = 42.7 bits (99), Expect = 8e-04
 Identities = 28/81 (34%), Positives = 42/81 (51%), Gaps = 3/81 (3%)

Query: 12 GLKAEEEACGFLKSLGFEMVERNFFSQFGEIDIIALKKGVLHFIEVKSGENF---DPIYA 68
          G + E+ A   L + G+ +V RN+     EIDIIA     L FIEVK+  +     P  +
Sbjct: 8  GAEGEKIAARHLAAKGYRIVARNYRFHRNEIDIIAFDGEALCFIEVKTRASLGKGHPAES 67

Query: 69 ITPSKLKKMIKTIRCYLSQKD 89
          +T SK K++ +    YL+  D
Sbjct: 68 VTRSKQKEIARAAAGYLASLD 88
>ref|NP_540686.1| (NC_003317) ENDONUCLEASE [Brucella melitensis]
 gb|AAL52950.1| (AE009610) ENDONUCLEASE [Brucella melitensis]
          Length = 126

 Score = 42.0 bits (97), Expect = 0.001
 Identities = 22/68 (32%), Positives = 41/68 (59%), Gaps = 1/68 (1%)

Query: 11 KGLKAEEEACGFLKSLGFEMVERNFFSQFGEIDIIALKKGVLHFIEVKSGENFDPI-YAI 69
          +G  AE  A   L   GF +V R + ++ GEID+IA +  ++  +EVK+  +F+   +A+
Sbjct: 14 RGHSAERLAAFALMLKGFRIVARRYRTRLGEIDLIARRGDLVLIVEVKARASFEAAQFAV 73

Query: 70 TPSKLKKM 77
          TP  ++++
Sbjct: 74 TPQAMRRI 81
>ref|NP_296003.1| (NC_001263) conserved hypothetical protein [Deinococcus
          radiodurans]
 pir||F75293 conserved hypothetical protein - Deinococcus radiodurans  (strain
          R1)
 gb|AAF11828.1|AE002060_7 (AE002060) conserved hypothetical protein [Deinococcus
          radiodurans]
          Length = 123

 Score = 41.6 bits (96), Expect = 0.002
 Identities = 29/87 (33%), Positives = 45/87 (51%), Gaps = 4/87 (4%)

Query: 11 KGLKAEEEACGFLKSLGFEMVERNFFSQFGEIDIIALKK-GVLHFIEVKSGENF---DPI 66
          +G  AE  A   L+SLG E+V RN+    GEID+++ +  G L F EV+          +
Sbjct: 11 QGAAAEARAAAHLESLGREIVRRNYRIPGGEIDLVSREPGGTLVFTEVRQRRQARYGSAL 70

Query: 67 YAITPSKLKKMIKTIRCYLSQKDPNSD 93
           ++TP KL  M +    YL+++    D
Sbjct: 71 DSVTPRKLALMHRAALEYLTRECGRDD 97
>ref|NP_614518.1| (NC_003551) Predicted endonuclease of the RecB family
          [Methanopyrus kandleri AV19]
 gb|AAM02448.1| (AE010414) Predicted endonuclease of the RecB family
          [Methanopyrus kandleri AV19]
          Length = 258

 Score = 40.4 bits (93), Expect = 0.004
 Identities = 23/55 (41%), Positives = 32/55 (57%), Gaps = 5/55 (9%)

Query: 11 KGLKAEEEACGFLKSLGFEMVERNFFSQF-----GEIDIIALKKGVLHFIEVKSG 60
          +G  AEE A   L+  GFE+V RN+  +       EIDI+A K G  + +EVK+G
Sbjct: 4  RGKSAEEIAASILRKEGFEVVARNYRVELEDELVAEIDIVAEKDGERYAVEVKAG 58
>ref|NP_245584.1| (NC_002663) unknown [Pasteurella multocida]
 sp|P57862|Y647_PASMU Hypothetical protein PM0647
 gb|AAK02731.1| (AE006101) unknown [Pasteurella multocida]
          Length = 119

 Score = 39.3 bits (90), Expect = 0.008
 Identities = 24/84 (28%), Positives = 44/84 (51%), Gaps = 3/84 (3%)

Query: 9  REKGLKAEEEACGFLKSLGFEMVERNFFSQFGEIDIIALKKGVLHFIEVKSGENF---DP 65
          R++G + E +A  FL+S G + V  N     GE+D+I   +  L F+EV+  +N      
Sbjct: 6  RQQGARFEYQARLFLESKGLQFVAANQSFSCGELDLIMRDQDTLVFVEVRQRKNAVFGSA 65

Query: 66 IYAITPSKLKKMIKTIRCYLSQKD 89
          + ++   K KK +     +L+Q++
Sbjct: 66 VESVDWKKQKKWLNAASLWLAQQN 89
>ref|NP_521384.1| (NC_003295) CONSERVED HYPOTHETICAL PROTEIN [Ralstonia solanacearum]
 emb|CAD17053.1| (AL646074) CONSERVED HYPOTHETICAL PROTEIN [Ralstonia solanacearum]
          Length = 130

 Score = 39.3 bits (90), Expect = 0.008
 Identities = 28/108 (25%), Positives = 53/108 (48%), Gaps = 8/108 (7%)

Query: 12  GLKAEEEACGFLKSLGFEMVERNFFSQFGEIDIIALK-KGVLHFIEV-----KSGENFDP 65
           G  AE+ A  +L++ G  ++ RN+  + GEID++     G L F+EV     +S + F  
Sbjct: 17  GEAAEDRALRYLQARGLSVIARNYRCKTGEIDLVMRDVAGTLVFVEVRARVARSAQRFGG 76

Query: 66  IYA-ITPSKLKKMIKTIRCYLSQKDPNSDFC-IDALIVKNGKFELLEN 111
             A +TP+K +++I     +L+        C  D + +   + E + +
Sbjct: 77  AAASVTPAKQRRLIAAAEDFLAGHPGEVPACRFDVIAIDGTRIEWMRD 124
  Database: /home/scwang/download_20020708_db/nr
    Posted date:  Aug 7, 2002 12:55 PM
  Number of letters in database: 324,149,939
  Number of sequences in database:  1,026,957
  
Lambda     K      H
   0.323    0.142    0.411 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 70,177,723
Number of Sequences: 1026957
Number of extensions: 2585510
Number of successful extensions: 5813
Number of sequences better than 1.0e-02: 19
Number of HSP's better than  0.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 7
Number of HSP's that attempted gapping in prelim test: 5797
Number of HSP's gapped (non-prelim): 19
length of query: 114
length of database: 324,149,939
effective HSP length: 90
effective length of query: 24
effective length of database: 231,723,809
effective search space: 5561371416
effective search space used: 5561371416
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 90 (39.3 bits)