BLASTP 2.2.1 [Apr-13-2001]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|15645560|ref|NP_207736.1| conserved hypothetical
protein [Helicobacter pylori 26695]
(125 letters)
Database: /home/scwang/download_20020708_db/nr
1,026,957 sequences; 324,149,939 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_207736.1| (NC_000915) conserved hypothetical protein... 242 5e-64
ref|NP_223597.1| (NC_000921) putative [Helicobacter pylori ... 240 2e-63
ref|NP_578397.1| (NC_003413) hypothetical protein [Pyrococc... 137 3e-32
sp|O58584|Y854_PYRHO Hypothetical protein PH0854 135 8e-32
ref|NP_126926.1| (NC_000868) TRANSLATION INITIATION INHIBIT... 135 8e-32
ref|NP_142784.1| (NC_000961) hypothetical protein [Pyrococc... 135 8e-32
ref|NP_498350.1| (NM_065949) C23G10.2.p [Caenorhabditis ele... 132 7e-31
ref|NP_470179.1| (NC_003212) conserved hypothetical protein... 132 7e-31
gb|AAM22035.1|U39851_6 (U39851) Hypothetical protein C23G10... 132 7e-31
ref|NP_561928.1| (NC_003366) probable translation initiatio... 130 2e-30
ref|NP_464370.1| (NC_003210) conserved hypothetical protein... 129 4e-30
ref|NP_623203.1| (NC_003869) putative translation initiatio... 128 1e-29
ref|NP_444063.1| (NC_000914) Y4sK [Rhizobium sp. NGR234] >g... 126 5e-29
ref|NP_653995.1| (NC_003995) UPF0076, YjgF family [Bacillus... 126 5e-29
dbj|BAB02821.1| (AB024036) contains similarity to protein t... 125 8e-29
ref|NP_188674.1| (NM_112930) translational inhibitor protei... 125 8e-29
ref|NP_347896.1| (NC_003030) Translation initiation inhibit... 123 3e-28
ref|NP_560421.1| (NC_003364) conserved hypothetical protein... 123 4e-28
ref|NP_602764.1| (NC_003454) Translation initiation inhibit... 122 9e-28
ref|XP_122829.1| (XM_122829) heat-responsive protein 12 [Mu... 120 2e-27
ref|NP_032313.1| (NM_008287) heat-responsive protein 12 [Mu... 120 2e-27
ref|NP_645269.1| (NC_003923) ORFID:MW0452~translation initi... 120 3e-27
ref|NP_246405.1| (NC_002663) unknown [Pasteurella multocida... 120 3e-27
ref|NP_282534.1| (NC_002163) hypothetical protein Cj1388 [C... 120 4e-27
ref|NP_344513.1| (NC_002754) Protein synthesis inhibitor, p... 120 4e-27
ref|NP_407045.1| (NC_003143) conserved hypothetical protein... 120 4e-27
ref|NP_387929.1| (NC_000964) similar to hypothetical protei... 119 5e-27
ref|NP_005827.1| (NM_005836) translational inhibitor protei... 119 5e-27
ref|NP_240929.1| (NC_002570) translation initiation inhibit... 119 5e-27
ref|NP_438877.1| (NC_000907) conserved hypothetical protein... 119 5e-27
ref|NP_232141.1| (NC_002505) conserved hypothetical protein... 119 8e-27
ref|NP_371021.1| (NC_002758) translation initiation inhibit... 119 8e-27
gb|AAG43443.1|AF186181_3 (AF186181) slr0709 [Synechococcus ... 118 1e-26
gb|AAC72281.1| (AF000167) 14.3 kDa perchloric acid soluble ... 118 1e-26
ref|NP_296232.1| (NC_001263) protein translation inhibitor,... 118 1e-26
pdb|1QD9|A Chain A, Bacillus Subtilis Yabj >gi|6573366|pdb|... 118 1e-26
ref|NP_442684.1| (NC_000911) hypothetical protein [Synechoc... 117 2e-26
sp|O52178|DFRA_MYXXA DFRA PROTEIN >gi|2736191|gb|AAB97678.1... 117 2e-26
ref|NP_113902.1| (NM_031714) heat-responsive protein 12 [Ra... 117 3e-26
ref|NP_346014.1| (NC_003028) endoribonuclease L-PSP [Strept... 117 3e-26
ref|NP_228030.1| (NC_000853) protein synthesis inhibitor, p... 116 4e-26
sp|P52759|UK14_RAT 14.5 kDa translational inhibitor protein... 116 4e-26
ref|NP_290875.1| (NC_002655) orf, hypothetical protein [Esc... 116 4e-26
pdb|1QU9|A Chain A, 1.2 A Crystal Structure Of Yjgf Gene Pr... 116 4e-26
sp|P39330|YJGF_ECOLI Protein yjgF 116 5e-26
pir||S74181 tumor antigen UK114 - goat 116 5e-26
ref|NP_313247.1| (NC_002695) hypothetical protein [Escheric... 116 5e-26
ref|NP_458876.1| (NC_003198) conserved hypothetical protein... 115 7e-26
sp|P97117|Y142_LEUMC HYPOTHETICAL 14.2 KD PROTEIN >gi|18570... 115 9e-26
ref|NP_404266.1| (NC_003143) putative translational inhibit... 115 1e-25
sp|P42631|TDCF_ECOLI TdcF protein 113 4e-25
ref|NP_417583.1| (NC_000913) orf, hypothetical protein [Esc... 113 4e-25
sp|P80601|UK14_CAPHI 14.5 kDa translational inhibitor prote... 113 4e-25
ref|NP_289685.1| (NC_002655) orf, hypothetical protein [Esc... 113 4e-25
ref|NP_609747.1| (NM_135903) BG:DS07851.3 gene product [Dro... 112 7e-25
ref|NP_458332.1| (NC_003198) putative regulatory protein [S... 111 2e-24
ref|NP_638585.1| (NC_003902) translation initiation inhibit... 111 2e-24
ref|NP_487909.1| (NC_003272) hypothetical protein [Nostoc s... 110 2e-24
ref|NP_267385.1| (NC_002662) regulatory protein AldR [Lacto... 110 3e-24
ref|NP_643699.1| (NC_003919) translation initiation inhibit... 110 3e-24
gb|AAL11406.1| (AY056454) YabJ [Staphylococcus epidermidis] 108 1e-23
gb|EAA01942.1| (AAAB01001370) agCP7554 [Anopheles gambiae s... 108 1e-23
ref|NP_376715.1| (NC_003106) 125aa long hypothetical transl... 108 1e-23
ref|NP_254026.1| (NC_002516) conserved hypothetical protein... 107 2e-23
gb|AAB81924.1| (U92974) aldR [Lactococcus lactis] 107 2e-23
pir||B44514 hypothetical protein 1 (vnfA 5' region) - Azoto... 107 3e-23
ref|NP_405246.1| (NC_003143) YjgF-family lipoprotein [Yersi... 104 2e-22
sp|P40431|YVN1_AZOVI HYPOTHETICAL 13.5 KD PROTEIN IN VNFA 5... 102 8e-22
gb|EAA11312.1| (AAAB01008960) agCP5758 [Anopheles gambiae s... 102 1e-21
ref|NP_297643.1| (NC_002488) translation initiation inhibit... 101 1e-21
ref|NP_147983.1| (NC_000854) hypothetical protein [Aeropyru... 100 2e-21
ref|NP_280763.1| (NC_002607) Vng2099c [Halobacterium sp. NR... 100 2e-21
ref|NP_273704.1| (NC_003112) ribonuclease, putative [Neisse... 95 2e-19
ref|NP_283653.1| (NC_003116) hypothetical protein NMA0861 [... 94 3e-19
ref|NP_213249.1| (NC_000918) hypothetical protein [Aquifex ... 94 4e-19
gb|AAF24094.1| (AF118109) Brt1 [Schizophyllum commune] 92 1e-18
ref|NP_240189.1| (NC_002528) hypothetical protein [Buchnera... 90 4e-18
ref|NP_660701.1| (NC_004061) hypothetical protein [Buchnera... 89 1e-17
ref|NP_541518.1| (NC_003318) PUTATIVE REGULATOR OF PURINE B... 85 1e-16
ref|NP_595001.1| (NC_003424) putative translation initiatio... 83 5e-16
pir||S30349 perchloric acid-soluble protein, 23K - rat >gi|... 83 5e-16
gb|AAK73279.1| (AY039805) BRT1 [Coccidioides immitis] 83 6e-16
ref|NP_596433.1| (NC_003423) hypothetical protein [Schizosa... 80 3e-15
ref|NP_436478.1| (NC_003037) hypothetical protein [Sinorhiz... 80 3e-15
ref|NP_012213.1| (NC_001141) Maintenance of Mitochondrial F... 79 7e-15
ref|NP_010978.1| (NC_001137) Homologous Mmf1p factor; Hmf1p... 77 3e-14
ref|NP_631776.1| (NC_003888) conserved hypothetical protein... 75 1e-13
ref|NP_437258.1| (NC_003078) putative protein, similar to t... 75 1e-13
ref|NP_522881.1| (NC_003296) CONSERVED HYPOTHETICAL PROTEIN... 75 2e-13
ref|NP_105319.1| (NC_002678) translation initiation inhibit... 73 5e-13
ref|NP_268529.1| (NC_002737) conserved hypothetical protein... 72 8e-13
ref|NP_522807.1| (NC_003296) PROBABLE LIPOPROTEIN [Ralstoni... 72 8e-13
ref|XP_088956.1| (XM_088956) similar to 14.5 kDa translatio... 72 1e-12
ref|NP_103845.1| (NC_002678) probable translation initiatio... 72 1e-12
ref|NP_103846.1| (NC_002678) probable translation initiatio... 70 4e-12
ref|NP_437363.1| (NC_003078) putative translation initiatio... 69 9e-12
ref|NP_533169.1| (NC_003304) conserved hypothetical protein... 68 2e-11
ref|NP_355445.1| (NC_003062) AGR_C_4539p [Agrobacterium tum... 68 2e-11
ref|NP_631614.1| (NC_003888) conserved hypothetical protein... 68 2e-11
ref|NP_534418.1| (NC_003305) translation initiation inhibit... 68 2e-11
ref|NP_356709.1| (NC_003063) AGR_L_1839p [Agrobacterium tum... 68 2e-11
ref|NP_629142.1| (NC_003888) conserved hypothetical protein... 66 6e-11
ref|NP_421592.1| (NC_002696) conserved hypothetical protein... 62 1e-09
ref|NP_656570.1| (NC_003995) UPF0076, YjgF family [Bacillus... 61 2e-09
ref|NP_415530.1| (NC_000913) orf, hypothetical protein [Esc... 61 3e-09
dbj|BAB97545.1| (AP005274) Putative translation initiation ... 60 3e-09
ref|NP_599404.1| (NC_003450) COG0251:Putative translation i... 60 3e-09
ref|NP_436903.1| (NC_003078) putative translation initiatio... 60 3e-09
ref|NP_522749.1| (NC_003296) CONSERVED HYPOTHETICAL PROTEIN... 60 4e-09
gb|AAF03490.1| (U93363) YjgF-like protein [Pseudomonas pseu... 60 4e-09
gb|AAK26518.1|AF319593_2 (AF319593) putative ferredoxin [Ps... 59 7e-09
gb|AAK26524.1|AF319593_8 (AF319593) 2-aminomuconate deamina... 59 7e-09
ref|NP_287015.1| (NC_002655) orf, hypothetical protein [Esc... 59 1e-08
gb|AAL99341.1|AC116306_18 (AC116306) 2-AMINOMUCONATE DEAMIN... 57 4e-08
dbj|BAB03536.1| (AB020521) AmnE [Pseudomonas sp.] 57 5e-08
ref|NP_253990.1| (NC_002516) conserved hypothetical protein... 56 6e-08
ref|NP_396162.1| (NC_003064) AGR_pAT_326p [Agrobacterium tu... 56 6e-08
ref|NP_251813.1| (NC_002516) conserved hypothetical protein... 55 2e-07
ref|NP_253770.1| (NC_002516) conserved hypothetical protein... 54 2e-07
dbj|BAC00795.1| (AB070454) orf5 [Rhodococcus sp. YK2] 54 3e-07
ref|NP_630561.1| (NC_003888) conserved hypothetical protein... 54 4e-07
ref|NP_437808.1| (NC_003078) putative translation initiatio... 53 5e-07
ref|NP_541281.1| (NC_003318) TRANSLATION INITIATION INHIBIT... 53 7e-07
ref|NP_523074.1| (NC_003296) CONSERVED HYPOTHETICAL PROTEIN... 53 7e-07
ref|NP_384842.1| (NC_003047) CONSERVED HYPOTHETICAL PROTEIN... 52 1e-06
ref|NP_628558.1| (NC_003888) putative acetyltransferase [St... 51 3e-06
ref|NP_387285.1| (NC_003047) CONSERVED HYPOTHETICAL PROTEIN... 49 8e-06
ref|NP_436902.1| (NC_003078) CONSERVED HYPOTHETICAL PROTEIN... 49 1e-05
ref|NP_601422.1| (NC_003450) COG0251:Putative translation i... 49 1e-05
ref|NP_254079.1| (NC_002516) conserved hypothetical protein... 49 1e-05
ref|NP_106096.1| (NC_002678) hypothetical protein [Mesorhiz... 48 2e-05
ref|NP_638622.1| (NC_003902) TdcF protein [Xanthomonas camp... 47 3e-05
ref|NP_541256.1| (NC_003318) TRANSLATION INITIATION INHIBIT... 47 5e-05
ref|NP_437242.1| (NC_003078) hypothetical membrane-anchored... 46 7e-05
ref|NP_284187.1| (NC_003116) hypothetical protein NMA1463 [... 46 7e-05
ref|NP_274059.1| (NC_003112) conserved hypothetical protein... 46 7e-05
ref|NP_059745.1| (NC_002377) yja [Agrobacterium tumefaciens... 45 1e-04
ref|NP_217220.1| (NC_000962) hypothetical protein Rv2704 [M... 45 1e-04
ref|NP_252862.1| (NC_002516) conserved hypothetical protein... 45 1e-04
gb|AAL02075.1|AF320254_5 (AF320254) hypothetical protein [A... 45 1e-04
ref|NP_522874.1| (NC_003296) CONSERVED HYPOTHETICAL PROTEIN... 45 2e-04
ref|NP_628331.1| (NC_003888) hypothetical protein SCD84.21 ... 45 2e-04
ref|NP_293759.1| (NC_001263) conserved hypothetical protein... 44 2e-04
ref|NP_595310.1| (NC_003423) conserved hypothetical protein... 44 3e-04
ref|NP_049176.1| (NC_002033) unknown [Novosphingobium aroma... 44 4e-04
ref|NP_288245.1| (NC_002655) orf, hypothetical protein [Esc... 43 6e-04
ref|NP_187098.1| (NM_111319) unknown protein [Arabidopsis t... 43 6e-04
ref|NP_250259.1| (NC_002516) conserved hypothetical protein... 43 6e-04
sp|P76258|YOAB_ECOLI Hypothetical protein yoaB 43 6e-04
dbj|BAA15618.1| (D90825) ORF_ID:o334#2; similar to [SwissPr... 43 6e-04
ref|NP_108436.1| (NC_002678) hypothetical protein [Mesorhiz... 43 6e-04
ref|NP_416323.1| (NC_000913) orf, hypothetical protein [Esc... 43 6e-04
ref|NP_435291.1| (NC_003037) conserved hypothetical protein... 43 7e-04
ref|NP_354480.1| (NC_003062) AGR_C_2721p [Agrobacterium tum... 43 7e-04
ref|NP_436434.1| (NC_003037) hypothetical protein [Sinorhiz... 42 0.001
ref|NP_405622.1| (NC_003143) conserved hypothetical protein... 42 0.001
ref|NP_102918.1| (NC_002678) hypothetical protein [Mesorhiz... 42 0.001
ref|NP_460509.1| (NC_003197) putative translation initiatio... 42 0.001
ref|NP_662064.1| (NC_002932) conserved hypothetical protein... 42 0.001
ref|NP_102732.1| (NC_002678) hypothetical protein [Mesorhiz... 42 0.002
ref|NP_105279.1| (NC_002678) hypothetical protein, putative... 41 0.002
ref|NP_643731.1| (NC_003919) TdcF protein [Xanthomonas axon... 41 0.003
ref|NP_599534.1| (NC_003450) COG0251:Putative translation i... 41 0.003
ref|NP_243951.1| (NC_002570) BH3085~unknown conserved prote... 41 0.003
ref|NP_105360.1| (NC_002678) hypothetical protein [Mesorhiz... 40 0.004
ref|NP_456329.1| (NC_003198) conserved hypothetical protein... 40 0.005
ref|NP_419905.1| (NC_002696) transcriptional regulator, put... 40 0.005
ref|NP_460778.1| (NC_003197) putative translation initiatio... 40 0.005
ref|NP_347711.1| (NC_003030) Putative translation initiatio... 40 0.006
ref|NP_521600.1| (NC_003296) CONSERVED HYPOTHETICAL PROTEIN... 40 0.006
ref|NP_404267.1| (NC_003143) putative translational inhibit... 40 0.006
ref|NP_302499.1| (NC_002677) conserved hypothetical protein... 40 0.006
>ref|NP_207736.1| (NC_000915) conserved hypothetical protein [Helicobacter pylori
26695]
sp|O25598|Y944_HELPY Hypothetical protein HP0944
pir||H64637 probable translation initiation inhibitor - Helicobacter pylori
(strain 26695)
gb|AAD07989.1| (AE000603) conserved hypothetical protein [Helicobacter pylori
26695]
Length = 125
Score = 242 bits (618), Expect = 5e-64
Identities = 125/125 (100%), Positives = 125/125 (100%)
Query: 1 MKEVIHSTLAPKAIGPYSQAIATNDLVFVSGQLGIDVSTGEFKGADIHSQTTQSMENIKA 60
MKEVIHSTLAPKAIGPYSQAIATNDLVFVSGQLGIDVSTGEFKGADIHSQTTQSMENIKA
Sbjct: 1 MKEVIHSTLAPKAIGPYSQAIATNDLVFVSGQLGIDVSTGEFKGADIHSQTTQSMENIKA 60
Query: 61 ILKEAGLGMDSVVKTTILLKSLDDFAVVNGIYGSYFTEPYPARATFQVAKLPKDALVEIE 120
ILKEAGLGMDSVVKTTILLKSLDDFAVVNGIYGSYFTEPYPARATFQVAKLPKDALVEIE
Sbjct: 61 ILKEAGLGMDSVVKTTILLKSLDDFAVVNGIYGSYFTEPYPARATFQVAKLPKDALVEIE 120
Query: 121 AIAIK 125
AIAIK
Sbjct: 121 AIAIK 125
>ref|NP_223597.1| (NC_000921) putative [Helicobacter pylori J99]
sp|Q9ZKQ6|Y944_HELPJ Hypothetical protein JHP0879
pir||A71878 hypothetical protein jhp0879 - Helicobacter pylori (strain J99)
gb|AAD06450.1| (AE001517) putative [Helicobacter pylori J99]
Length = 125
Score = 240 bits (612), Expect = 2e-63
Identities = 124/125 (99%), Positives = 124/125 (99%)
Query: 1 MKEVIHSTLAPKAIGPYSQAIATNDLVFVSGQLGIDVSTGEFKGADIHSQTTQSMENIKA 60
MKEVIHSTLAPKAIGPYSQAIATNDLVFVSGQLGIDVSTGEFKGADIHSQTTQSMENIKA
Sbjct: 1 MKEVIHSTLAPKAIGPYSQAIATNDLVFVSGQLGIDVSTGEFKGADIHSQTTQSMENIKA 60
Query: 61 ILKEAGLGMDSVVKTTILLKSLDDFAVVNGIYGSYFTEPYPARATFQVAKLPKDALVEIE 120
ILKEAGLGMDSVVKTTILLKSLDDFAVVNGIYGSYF EPYPARATFQVAKLPKDALVEIE
Sbjct: 61 ILKEAGLGMDSVVKTTILLKSLDDFAVVNGIYGSYFKEPYPARATFQVAKLPKDALVEIE 120
Query: 121 AIAIK 125
AIAIK
Sbjct: 121 AIAIK 125
>ref|NP_578397.1| (NC_003413) hypothetical protein [Pyrococcus furiosus DSM 3638]
gb|AAL80792.1| (AE010187) hypothetical protein [Pyrococcus furiosus DSM 3638]
Length = 126
Score = 137 bits (344), Expect = 3e-32
Identities = 69/125 (55%), Positives = 88/125 (70%)
Query: 1 MKEVIHSTLAPKAIGPYSQAIATNDLVFVSGQLGIDVSTGEFKGADIHSQTTQSMENIKA 60
MKEVI + APK IGPYSQAI + +F++GQ+ ID TGE DI +QT Q +ENIKA
Sbjct: 1 MKEVIFAENAPKPIGPYSQAIKAGNFLFIAGQIPIDPKTGEIVKGDIKAQTRQVLENIKA 60
Query: 61 ILKEAGLGMDSVVKTTILLKSLDDFAVVNGIYGSYFTEPYPARATFQVAKLPKDALVEIE 120
IL+ AG + VVK T+ LK ++DFA +N +Y YF E PARA +V++LPKD L+EIE
Sbjct: 61 ILEAAGYSLTDVVKVTVYLKDMNDFAKMNEVYAEYFGESKPARAAVEVSRLPKDVLIEIE 120
Query: 121 AIAIK 125
AIA K
Sbjct: 121 AIAYK 125
>sp|O58584|Y854_PYRHO Hypothetical protein PH0854
Length = 126
Score = 135 bits (340), Expect = 8e-32
Identities = 67/125 (53%), Positives = 87/125 (69%)
Query: 1 MKEVIHSTLAPKAIGPYSQAIATNDLVFVSGQLGIDVSTGEFKGADIHSQTTQSMENIKA 60
MKEVI + APK IGPYSQAI + +F++GQ+ ID TGE DI QT Q +ENIKA
Sbjct: 1 MKEVIFTENAPKPIGPYSQAIKAGNFLFIAGQIPIDPKTGEIVKGDIKDQTRQVLENIKA 60
Query: 61 ILKEAGLGMDSVVKTTILLKSLDDFAVVNGIYGSYFTEPYPARATFQVAKLPKDALVEIE 120
IL+ AG ++ V+K T+ LK ++DFA +N +Y YF E PAR +V++LPKD L+EIE
Sbjct: 61 ILEAAGYSLNDVIKVTVYLKDMNDFAKMNEVYAEYFGESKPARVAVEVSRLPKDVLIEIE 120
Query: 121 AIAIK 125
AIA K
Sbjct: 121 AIAYK 125
>ref|NP_126926.1| (NC_000868) TRANSLATION INITIATION INHIBITOR, PUTATIVE. [Pyrococcus
abyssi]
sp|Q9UZA3|Y825_PYRAB Hypothetical protein PAB0825
pir||G75032 probable translation initiation inhibitor PAB0825 - Pyrococcus
abyssi (strain Orsay)
emb|CAB50156.1| (AJ248287) TRANSLATION INITIATION INHIBITOR, PUTATIVE. [Pyrococcus
abyssi]
Length = 127
Score = 135 bits (340), Expect = 8e-32
Identities = 68/124 (54%), Positives = 87/124 (69%)
Query: 2 KEVIHSTLAPKAIGPYSQAIATNDLVFVSGQLGIDVSTGEFKGADIHSQTTQSMENIKAI 61
KEVI + APK IGPYSQAI + +FV+GQ+ ID TGE DI QT + +ENIKAI
Sbjct: 3 KEVIFTEKAPKPIGPYSQAIKVGNFIFVAGQIPIDPETGEIVKGDIKEQTKRVIENIKAI 62
Query: 62 LKEAGLGMDSVVKTTILLKSLDDFAVVNGIYGSYFTEPYPARATFQVAKLPKDALVEIEA 121
L+EAG ++ VVK T+ LK L+DFA +N +Y YF E PAR +V++LPKD L+E+EA
Sbjct: 63 LEEAGASLNDVVKVTVYLKDLNDFAKMNEVYSEYFGESKPARVAVEVSRLPKDVLIEMEA 122
Query: 122 IAIK 125
IA K
Sbjct: 123 IAYK 126
>ref|NP_142784.1| (NC_000961) hypothetical protein [Pyrococcus horikoshii]
pir||B71136 hypothetical protein PH0854 - Pyrococcus horikoshii
dbj|BAA29948.1| (AP000003) 137aa long hypothetical protein [Pyrococcus horikoshii]
Length = 137
Score = 135 bits (340), Expect = 8e-32
Identities = 67/125 (53%), Positives = 87/125 (69%)
Query: 1 MKEVIHSTLAPKAIGPYSQAIATNDLVFVSGQLGIDVSTGEFKGADIHSQTTQSMENIKA 60
MKEVI + APK IGPYSQAI + +F++GQ+ ID TGE DI QT Q +ENIKA
Sbjct: 12 MKEVIFTENAPKPIGPYSQAIKAGNFLFIAGQIPIDPKTGEIVKGDIKDQTRQVLENIKA 71
Query: 61 ILKEAGLGMDSVVKTTILLKSLDDFAVVNGIYGSYFTEPYPARATFQVAKLPKDALVEIE 120
IL+ AG ++ V+K T+ LK ++DFA +N +Y YF E PAR +V++LPKD L+EIE
Sbjct: 72 ILEAAGYSLNDVIKVTVYLKDMNDFAKMNEVYAEYFGESKPARVAVEVSRLPKDVLIEIE 131
Query: 121 AIAIK 125
AIA K
Sbjct: 132 AIAYK 136
>ref|NP_498350.1| (NM_065949) C23G10.2.p [Caenorhabditis elegans]
sp|Q10121|YSD2_CAEEL Hypothetical protein C23G10.2 in chromosome III precursor
pir||T15580 hypothetical protein C23G10.2 - Caenorhabditis elegans
gb|AAF99878.1| (U39851) Hypothetical protein C23G10.2a [Caenorhabditis elegans]
Length = 185
Score = 132 bits (332), Expect = 7e-31
Identities = 65/123 (52%), Positives = 88/123 (70%), Gaps = 1/123 (0%)
Query: 2 KEVIHSTLAPKAIGPYSQAIATNDLVFVSGQLGIDVSTGEFKGADIHSQTTQSMENIKAI 61
+++I S AP AIGPYSQA+ + +++SG LG+D TG+ K + QT QS++N+ +
Sbjct: 55 RQIISSANAPGAIGPYSQAVRAGNTIYLSGSLGLDPKTGDLKEGVVE-QTHQSLKNLGEV 113
Query: 62 LKEAGLGMDSVVKTTILLKSLDDFAVVNGIYGSYFTEPYPARATFQVAKLPKDALVEIEA 121
LK AG +VVKTT+LL+++ DFA VN +YG YF PYPARA +QVA LPK LVEIEA
Sbjct: 114 LKAAGADYGNVVKTTVLLQNIADFAAVNEVYGQYFKSPYPARAAYQVAALPKGGLVEIEA 173
Query: 122 IAI 124
+AI
Sbjct: 174 VAI 176
>ref|NP_470179.1| (NC_003212) conserved hypothetical protein [Listeria innocua]
emb|CAC96069.1| (AL596166) conserved hypothetical protein [Listeria innocua]
Length = 125
Score = 132 bits (332), Expect = 7e-31
Identities = 64/123 (52%), Positives = 90/123 (73%), Gaps = 3/123 (2%)
Query: 2 KEVIHSTLAPKAIGPYSQAIATNDLVFVSGQLGIDVSTGEF-KGADIHSQTTQSMENIKA 60
KE+I ++ APKA+GPYSQA+ N L+F SGQLGI+ +TGE +GA Q Q+ +N+ A
Sbjct: 3 KEIIQTSSAPKALGPYSQAVKVNGLIFTSGQLGINPATGELAEGAT--KQAEQAFKNLAA 60
Query: 61 ILKEAGLGMDSVVKTTILLKSLDDFAVVNGIYGSYFTEPYPARATFQVAKLPKDALVEIE 120
+L+EAG G+D ++K T+ K L+DF VN +Y ++F+ +PAR+ FQVAKLP DA +EIE
Sbjct: 61 VLEEAGSGLDKIIKATVFFKDLNDFTAVNEVYATFFSSDFPARSAFQVAKLPLDADIEIE 120
Query: 121 AIA 123
IA
Sbjct: 121 VIA 123
>gb|AAM22035.1|U39851_6 (U39851) Hypothetical protein C23G10.2b [Caenorhabditis elegans]
Length = 144
Score = 132 bits (332), Expect = 7e-31
Identities = 65/123 (52%), Positives = 88/123 (70%), Gaps = 1/123 (0%)
Query: 2 KEVIHSTLAPKAIGPYSQAIATNDLVFVSGQLGIDVSTGEFKGADIHSQTTQSMENIKAI 61
+++I S AP AIGPYSQA+ + +++SG LG+D TG+ K + QT QS++N+ +
Sbjct: 14 RQIISSANAPGAIGPYSQAVRAGNTIYLSGSLGLDPKTGDLKEGVVE-QTHQSLKNLGEV 72
Query: 62 LKEAGLGMDSVVKTTILLKSLDDFAVVNGIYGSYFTEPYPARATFQVAKLPKDALVEIEA 121
LK AG +VVKTT+LL+++ DFA VN +YG YF PYPARA +QVA LPK LVEIEA
Sbjct: 73 LKAAGADYGNVVKTTVLLQNIADFAAVNEVYGQYFKSPYPARAAYQVAALPKGGLVEIEA 132
Query: 122 IAI 124
+AI
Sbjct: 133 VAI 135
>ref|NP_561928.1| (NC_003366) probable translation initiation inhibitor [Clostridium
perfringens]
dbj|BAB80718.1| (AP003189) probable translation initiation inhibitor [Clostridium
perfringens]
Length = 126
Score = 130 bits (328), Expect = 2e-30
Identities = 65/122 (53%), Positives = 85/122 (69%), Gaps = 1/122 (0%)
Query: 2 KEVIHSTLAPKAIGPYSQAIATNDLVFVSGQLGIDVSTGEFKGADIHSQTTQSMENIKAI 61
KE+I + AP AIGPYSQ I D V+ SGQ+ ++ TG G+ I QT QS+EN+KAI
Sbjct: 3 KEIIKTNKAPGAIGPYSQGIKIGDFVYTSGQIPLNPETGVMAGS-IEEQTAQSLENVKAI 61
Query: 62 LKEAGLGMDSVVKTTILLKSLDDFAVVNGIYGSYFTEPYPARATFQVAKLPKDALVEIEA 121
L+ AG MD V+KTT+ L ++DF +N +Y +YFTE PAR+ +VAKLPKDA +EIE
Sbjct: 62 LEAAGTSMDKVIKTTVFLSDMNDFVRMNEVYATYFTENQPARSAVEVAKLPKDAKIEIEV 121
Query: 122 IA 123
IA
Sbjct: 122 IA 123
>ref|NP_464370.1| (NC_003210) conserved hypothetical protein [Listeria monocytogenes
EGD-e]
emb|CAC98922.1| (AL591976) conserved hypothetical protein [Listeria monocytogenes]
Length = 125
Score = 129 bits (325), Expect = 4e-30
Identities = 61/122 (50%), Positives = 87/122 (71%), Gaps = 1/122 (0%)
Query: 2 KEVIHSTLAPKAIGPYSQAIATNDLVFVSGQLGIDVSTGEFKGADIHSQTTQSMENIKAI 61
KE+I ++ APKA+GPYSQA+ N L+F SGQLGI+ +TGE Q Q+ +N+ A+
Sbjct: 3 KEIIQTSSAPKALGPYSQAVKVNGLIFTSGQLGINPATGELV-VGATKQAEQAFKNLAAV 61
Query: 62 LKEAGLGMDSVVKTTILLKSLDDFAVVNGIYGSYFTEPYPARATFQVAKLPKDALVEIEA 121
L+EAG G+D ++K T+ K L++F VN +Y ++F+ +PAR+ FQVAKLP DA +EIE
Sbjct: 62 LEEAGSGLDKIIKATVFFKDLNEFKAVNEVYATFFSSDFPARSAFQVAKLPLDAEIEIEV 121
Query: 122 IA 123
IA
Sbjct: 122 IA 123
>ref|NP_623203.1| (NC_003869) putative translation initiation inhibitor
[Thermoanaerobacter tengcongensis]
gb|AAM24807.1| (AE013115) putative translation initiation inhibitor
[Thermoanaerobacter tengcongensis]
Length = 125
Score = 128 bits (322), Expect = 1e-29
Identities = 61/125 (48%), Positives = 89/125 (70%)
Query: 1 MKEVIHSTLAPKAIGPYSQAIATNDLVFVSGQLGIDVSTGEFKGADIHSQTTQSMENIKA 60
MK +I++ APKAIGPYSQA+ + ++ +GQ+ ID +TGE ADI QT + +ENI+A
Sbjct: 1 MKTIINTDAAPKAIGPYSQAVLVDGFLYTAGQIAIDPATGEMVEADIEKQTERVLENIRA 60
Query: 61 ILKEAGLGMDSVVKTTILLKSLDDFAVVNGIYGSYFTEPYPARATFQVAKLPKDALVEIE 120
IL+ AG+ ++V+KTT+ + ++ DFA +N IYG YF + PAR+ +V LPK AL+EIE
Sbjct: 61 ILRAAGMDFNNVIKTTVFVTNMADFAKINEIYGRYFKDNPPARSLVEVKSLPKGALIEIE 120
Query: 121 AIAIK 125
+A K
Sbjct: 121 VVAHK 125
>ref|NP_444063.1| (NC_000914) Y4sK [Rhizobium sp. NGR234]
sp|P55654|Y4SK_RHISN HYPOTHETICAL 13.3 KD PROTEIN Y4SK
gb|AAB91850.1| (AE000097) Y4sK [Rhizobium sp. NGR234]
Length = 126
Score = 126 bits (316), Expect = 5e-29
Identities = 64/122 (52%), Positives = 83/122 (67%)
Query: 1 MKEVIHSTLAPKAIGPYSQAIATNDLVFVSGQLGIDVSTGEFKGADIHSQTTQSMENIKA 60
M E I + AP A+GPYSQAI DL+FVSGQL ID +TGEF A+ Q Q ++N++A
Sbjct: 1 MIEPISTNDAPGAVGPYSQAIKVGDLLFVSGQLPIDPATGEFNSANAVEQAEQCLKNLQA 60
Query: 61 ILKEAGLGMDSVVKTTILLKSLDDFAVVNGIYGSYFTEPYPARATFQVAKLPKDALVEIE 120
I + AG + VKTT+LL L DFA +N +Y +F+ PYPARA ++V LPK A VEIE
Sbjct: 61 IARAAGTDLSKTVKTTVLLTDLGDFADINRVYTGFFSTPYPARACYEVKALPKGAKVEIE 120
Query: 121 AI 122
A+
Sbjct: 121 AV 122
>ref|NP_653995.1| (NC_003995) UPF0076, YjgF family [Bacillus anthracis A2012]
[Bacillus anthracis str. A2012]
Length = 124
Score = 126 bits (316), Expect = 5e-29
Identities = 63/122 (51%), Positives = 85/122 (69%), Gaps = 1/122 (0%)
Query: 3 EVIHSTLAPKAIGPYSQAIATNDLVFVSGQLGIDVSTGEFKGADIHSQTTQSMENIKAIL 62
+V+ + AP+AIGPYSQ I N++ + SGQ+ + S GE D+ QT Q +N++A+L
Sbjct: 2 KVVQTNNAPQAIGPYSQGIIVNNMFYSSGQIPLTAS-GELVAGDVTVQTEQVFQNLQAVL 60
Query: 63 KEAGLGMDSVVKTTILLKSLDDFAVVNGIYGSYFTEPYPARATFQVAKLPKDALVEIEAI 122
+EAG D+VVKTT+ LK +DDF VN +YGSYF+ PAR+ QVAKLPKD VEIE I
Sbjct: 61 EEAGASFDTVVKTTVFLKDMDDFNAVNEVYGSYFSAHKPARSCVQVAKLPKDVSVEIEVI 120
Query: 123 AI 124
A+
Sbjct: 121 AL 122
>dbj|BAB02821.1| (AB024036) contains similarity to protein translation
inhibitor~gene_id:MQC12.17 [Arabidopsis thaliana]
Length = 143
Score = 125 bits (314), Expect = 8e-29
Identities = 65/122 (53%), Positives = 82/122 (66%)
Query: 2 KEVIHSTLAPKAIGPYSQAIATNDLVFVSGQLGIDVSTGEFKGADIHSQTTQSMENIKAI 61
KEV+ + AP A+GPYSQAI N+LVF+SG LG+ TG+F + QT Q ++N+ I
Sbjct: 20 KEVVSTEKAPAALGPYSQAIKANNLVFLSGVLGLIPETGKFVSESVEDQTEQVLKNMGEI 79
Query: 62 LKEAGLGMDSVVKTTILLKSLDDFAVVNGIYGSYFTEPYPARATFQVAKLPKDALVEIEA 121
LK +G SVVKTTI+L L DF VN IY YF P PAR+T+QVA LP +A +EIE
Sbjct: 80 LKASGADYSSVVKTTIMLADLADFKTVNEIYAKYFPAPSPARSTYQVAALPLNAKIEIEC 139
Query: 122 IA 123
IA
Sbjct: 140 IA 141
>ref|NP_188674.1| (NM_112930) translational inhibitor protein, putative [Arabidopsis
thaliana]
gb|AAK53030.1|AF375446_1 (AF375446) AT3g20390/MQC12_15 [Arabidopsis thaliana]
gb|AAL31178.1| (AY060547) AT3g20390/MQC12_15 [Arabidopsis thaliana]
gb|AAM63246.1| (AY086036) translational inhibitor protein, putative [Arabidopsis
thaliana]
Length = 187
Score = 125 bits (314), Expect = 8e-29
Identities = 65/122 (53%), Positives = 82/122 (66%)
Query: 2 KEVIHSTLAPKAIGPYSQAIATNDLVFVSGQLGIDVSTGEFKGADIHSQTTQSMENIKAI 61
KEV+ + AP A+GPYSQAI N+LVF+SG LG+ TG+F + QT Q ++N+ I
Sbjct: 64 KEVVSTEKAPAALGPYSQAIKANNLVFLSGVLGLIPETGKFVSESVEDQTEQVLKNMGEI 123
Query: 62 LKEAGLGMDSVVKTTILLKSLDDFAVVNGIYGSYFTEPYPARATFQVAKLPKDALVEIEA 121
LK +G SVVKTTI+L L DF VN IY YF P PAR+T+QVA LP +A +EIE
Sbjct: 124 LKASGADYSSVVKTTIMLADLADFKTVNEIYAKYFPAPSPARSTYQVAALPLNAKIEIEC 183
Query: 122 IA 123
IA
Sbjct: 184 IA 185
>ref|NP_347896.1| (NC_003030) Translation initiation inhibitor, yabJ B.subtilis
ortholog [Clostridium acetobutylicum]
gb|AAK79236.1|AE007639_9 (AE007639) Translation initiation inhibitor, yabJ B.subtilis
ortholog [Clostridium acetobutylicum]
Length = 127
Score = 123 bits (309), Expect = 3e-28
Identities = 64/123 (52%), Positives = 85/123 (69%), Gaps = 1/123 (0%)
Query: 2 KEVIHSTLAPKAIGPYSQAIATNDLVFVSGQLGIDVSTGEFKGADIHSQTTQSMENIKAI 61
KE+I + AP AIGPYSQA+ +L+F SGQ+ ID TGE DI T + +NI AI
Sbjct: 3 KEIIKTDKAPGAIGPYSQAVKVGNLLFTSGQVPIDPKTGELVSKDIKEATDRVFKNIGAI 62
Query: 62 LKEAGLGMDSVVKTTILLKSLDDFAVVNGIYGSYFTEPYPARATFQVAKLPKDALVEIEA 121
L+EAG ++VVKT + +K ++DF+ VN IY YF++ PAR+ Q AKLPKDALVEIE
Sbjct: 63 LEEAGTSFENVVKTVVFVKDMNDFSSVNEIYAKYFSKNEPARSCVQ-AKLPKDALVEIEV 121
Query: 122 IAI 124
+A+
Sbjct: 122 VAV 124
>ref|NP_560421.1| (NC_003364) conserved hypothetical protein [Pyrobaculum aerophilum]
gb|AAL64603.1| (AE009906) conserved hypothetical protein [Pyrobaculum aerophilum]
Length = 126
Score = 123 bits (308), Expect = 4e-28
Identities = 61/125 (48%), Positives = 82/125 (64%)
Query: 1 MKEVIHSTLAPKAIGPYSQAIATNDLVFVSGQLGIDVSTGEFKGADIHSQTTQSMENIKA 60
MKEVI++ APK IGPYSQA+ +L+FVSGQ+ +D TGE DI QT Q +ENIKA
Sbjct: 1 MKEVIYTDKAPKPIGPYSQAVRVGNLLFVSGQIPVDPKTGEVVKGDIRDQTRQVLENIKA 60
Query: 61 ILKEAGLGMDSVVKTTILLKSLDDFAVVNGIYGSYFTEPYPARATFQVAKLPKDALVEIE 120
+L+ AG ++ VV + L ++ F + N +Y YF E PAR T Q A+LP+D L+EI
Sbjct: 61 VLEAAGYTLNDVVMAFVFLADMNHFPLFNEVYAMYFPERPPARVTVQAARLPRDVLIEIA 120
Query: 121 AIAIK 125
IA +
Sbjct: 121 VIAAR 125
>ref|NP_602764.1| (NC_003454) Translation initiation inhibitor [Fusobacterium
nucleatum subsp. nucleatum ATCC 25586]
gb|AAL94063.1| (AE010499) Translation initiation inhibitor [Fusobacterium
nucleatum subsp. nucleatum ATCC 25586]
Length = 128
Score = 122 bits (305), Expect = 9e-28
Identities = 62/125 (49%), Positives = 82/125 (65%)
Query: 1 MKEVIHSTLAPKAIGPYSQAIATNDLVFVSGQLGIDVSTGEFKGADIHSQTTQSMENIKA 60
MK+VI++ AP A+GPYSQAI N +++VSGQ+ +T D+ QT QS+ENI A
Sbjct: 4 MKKVINTKNAPAALGPYSQAIEANGVLYVSGQIPFVPATMTLVSEDVEEQTKQSLENIGA 63
Query: 61 ILKEAGLGMDSVVKTTILLKSLDDFAVVNGIYGSYFTEPYPARATFQVAKLPKDALVEIE 120
ILKEAG VV T+ +K ++DF +NG+Y Y E PARA +VA+LPKD VEI
Sbjct: 64 ILKEAGYDFKDVVSATVYIKDMNDFTKINGVYDKYLGEVKPARACVEVARLPKDVKVEIG 123
Query: 121 AIAIK 125
IA+K
Sbjct: 124 VIAVK 128
>ref|XP_122829.1| (XM_122829) heat-responsive protein 12 [Mus musculus]
Length = 135
Score = 120 bits (302), Expect = 2e-27
Identities = 58/125 (46%), Positives = 88/125 (70%)
Query: 1 MKEVIHSTLAPKAIGPYSQAIATNDLVFVSGQLGIDVSTGEFKGADIHSQTTQSMENIKA 60
+++VI +T AP AIGPYSQA+ + +++SGQ+G+D S+G+ + + Q+++N+
Sbjct: 5 IRKVISTTKAPAAIGPYSQAVQVDRTIYISGQVGLDPSSGQLVPGGVVEEAKQALKNLGE 64
Query: 61 ILKEAGLGMDSVVKTTILLKSLDDFAVVNGIYGSYFTEPYPARATFQVAKLPKDALVEIE 120
ILK AG ++VVKTT+LL ++DF VN IY +YF PARA +QVA LP+ + VEIE
Sbjct: 65 ILKAAGCDFNNVVKTTVLLADMNDFGTVNEIYKTYFQGSLPARAAYQVAALPRGSRVEIE 124
Query: 121 AIAIK 125
AIA++
Sbjct: 125 AIAVQ 129
>ref|NP_032313.1| (NM_008287) heat-responsive protein 12 [Mus musculus]
sp|P52760|HR12_MOUSE HEAT-RESPONSIVE PROTEIN 12
gb|AAA96033.1| (U50631) heat-responsive protein [Mus musculus]
Length = 173
Score = 120 bits (302), Expect = 2e-27
Identities = 58/125 (46%), Positives = 88/125 (70%)
Query: 1 MKEVIHSTLAPKAIGPYSQAIATNDLVFVSGQLGIDVSTGEFKGADIHSQTTQSMENIKA 60
+++VI +T AP AIGPYSQA+ + +++SGQ+G+D S+G+ + + Q+++N+
Sbjct: 43 IRKVISTTKAPAAIGPYSQAVQVDRTIYISGQVGLDPSSGQLVPGGVVEEAKQALKNLGE 102
Query: 61 ILKEAGLGMDSVVKTTILLKSLDDFAVVNGIYGSYFTEPYPARATFQVAKLPKDALVEIE 120
ILK AG ++VVKTT+LL ++DF VN IY +YF PARA +QVA LP+ + VEIE
Sbjct: 103 ILKAAGCDFNNVVKTTVLLADMNDFGTVNEIYKTYFQGSLPARAAYQVAALPRGSRVEIE 162
Query: 121 AIAIK 125
AIA++
Sbjct: 163 AIAVQ 167
>ref|NP_645269.1| (NC_003923) ORFID:MW0452~translation initiation inhibitor homologue
[Staphylococcus aureus subsp. aureus MW2]
dbj|BAB94317.1| (AP004823) ORFID:MW0452~translation initiation inhibitor homologue
[Staphylococcus aureus subsp. aureus MW2]
Length = 126
Score = 120 bits (301), Expect = 3e-27
Identities = 56/121 (46%), Positives = 85/121 (69%), Gaps = 1/121 (0%)
Query: 3 EVIHSTLAPKAIGPYSQAIATNDLVFVSGQLGIDVSTGEFKGADIHSQTTQSMENIKAIL 62
++I++T P+A+GPYS A N +V+ SGQ+ ++V GE AD+ +QT Q +EN+K +L
Sbjct: 2 KIINTTRLPEALGPYSHATVVNGMVYTSGQIPLNVD-GEIVSADVQAQTKQVLENLKVVL 60
Query: 63 KEAGLGMDSVVKTTILLKSLDDFAVVNGIYGSYFTEPYPARATFQVAKLPKDALVEIEAI 122
+EAG ++SV K TI +K ++DF +N +YG YF E PAR+ +VA+LPKD VEIE +
Sbjct: 61 EEAGSDLNSVAKATIFIKDMNDFQKINEVYGQYFNEHKPARSCVEVARLPKDVKVEIELV 120
Query: 123 A 123
+
Sbjct: 121 S 121
>ref|NP_246405.1| (NC_002663) unknown [Pasteurella multocida]
sp|Q9L6B5|YE66_PASMU Hypothetical protein PM1466
gb|AAF68409.1|AF237923_1 (AF237923) conserved hypothetical protein [Pasteurella multocida]
gb|AAK03550.1| (AE006183) unknown [Pasteurella multocida]
Length = 129
Score = 120 bits (301), Expect = 3e-27
Identities = 63/129 (48%), Positives = 91/129 (69%), Gaps = 5/129 (3%)
Query: 1 MKEVIHSTLAPKAIGPYSQAIATNDLVFVSGQLGIDVSTGEFKGADIHSQTTQSMENIKA 60
M +VIH+ AP AIGPY QA+ +++ SGQ+ ++ TGE ADI +Q QS+EN+KA
Sbjct: 1 MTKVIHTDNAPAAIGPYVQAVDLGNMLLTSGQIPVNPKTGEVP-ADIVAQARQSLENVKA 59
Query: 61 ILKEAGLGMDSVVKTTILLKSLDDFAVVNGIYGSYFTE----PYPARATFQVAKLPKDAL 116
I+++AGL + ++VKTT+ +K L+DFA VN Y +F E +PAR+ +VA+LPKD
Sbjct: 60 IVEQAGLQVANIVKTTVFVKDLNDFAAVNAEYERFFKENNHPSFPARSCVEVARLPKDVG 119
Query: 117 VEIEAIAIK 125
+EIEAIA+K
Sbjct: 120 IEIEAIAVK 128
>ref|NP_282534.1| (NC_002163) hypothetical protein Cj1388 [Campylobacter jejuni]
pir||A81284 hypothetical protein Cj1388 [imported] - Campylobacter jejuni
(strain NCTC 11168)
emb|CAB73815.1| (AL139078) hypothetical protein Cj1388 [Campylobacter jejuni]
Length = 120
Score = 120 bits (300), Expect = 4e-27
Identities = 61/115 (53%), Positives = 77/115 (66%)
Query: 11 PKAIGPYSQAIATNDLVFVSGQLGIDVSTGEFKGADIHSQTTQSMENIKAILKEAGLGMD 70
PKAIGPYS N L+F+SGQL I+ ++GE + +DI QT QS++NI AIL+E G+ D
Sbjct: 5 PKAIGPYSAYREVNGLLFISGQLPINPASGEIESSDIKEQTKQSLKNIGAILEENGISYD 64
Query: 71 SVVKTTILLKSLDDFAVVNGIYGSYFTEPYPARATFQVAKLPKDALVEIEAIAIK 125
V+KTT L ++DF N IY +F PYPAR+ F V LPK A VEIE IA K
Sbjct: 65 KVIKTTCFLADINDFVAFNEIYAEFFKAPYPARSAFAVKDLPKKAKVEIEIIAQK 119
>ref|NP_344513.1| (NC_002754) Protein synthesis inhibitor, putative [Sulfolobus
solfataricus]
sp|Q97U19|YW06_SULSO Hypothetical protein SSO3206
gb|AAK43303.1| (AE006909) Protein synthesis inhibitor, putative [Sulfolobus
solfataricus]
Length = 126
Score = 120 bits (300), Expect = 4e-27
Identities = 58/125 (46%), Positives = 82/125 (65%)
Query: 1 MKEVIHSTLAPKAIGPYSQAIATNDLVFVSGQLGIDVSTGEFKGADIHSQTTQSMENIKA 60
MKE+I + APK IGPYSQ + D+++VSGQ+ +D T E G +I QT + +ENIKA
Sbjct: 1 MKEIIFTEKAPKPIGPYSQGVKVGDILYVSGQIPVDPKTNEVVGKNIEEQTIRVIENIKA 60
Query: 61 ILKEAGLGMDSVVKTTILLKSLDDFAVVNGIYGSYFTEPYPARATFQVAKLPKDALVEIE 120
+L+ AG +D VV + + LK + DF N +Y YF+ PAR T +V++LP+D L+EI
Sbjct: 61 VLEAAGYMLDDVVMSFVYLKDIKDFQRFNEVYSKYFSNKPPARVTVEVSRLPRDVLIEIT 120
Query: 121 AIAIK 125
IA K
Sbjct: 121 VIAQK 125
>ref|NP_407045.1| (NC_003143) conserved hypothetical protein [Yersinia pestis]
emb|CAC92818.1| (AJ414157) conserved hypothetical protein [Yersinia pestis]
Length = 128
Score = 120 bits (300), Expect = 4e-27
Identities = 61/128 (47%), Positives = 87/128 (67%), Gaps = 4/128 (3%)
Query: 1 MKEVIHSTLAPKAIGPYSQAIATNDLVFVSGQLGIDVSTGEFKGADIHSQTTQSMENIKA 60
M I + LAP AIGPY Q + ++ SGQ+ ID TG DI +Q QS+EN+KA
Sbjct: 1 MLRAIKTKLAPAAIGPYVQGVDLGSMIMTSGQIPIDPKTG-LVADDIAAQARQSLENVKA 59
Query: 61 ILKEAGLGMDSVVKTTILLKSLDDFAVVNGIYGSYFTE---PYPARATFQVAKLPKDALV 117
I++ AGL + +VKTT+ +K L+DF++VN Y ++FTE P+PAR+ +VA+LPKD +
Sbjct: 60 IVEAAGLKVADIVKTTVFVKDLNDFSIVNATYEAFFTEHSAPFPARSCVEVARLPKDVKI 119
Query: 118 EIEAIAIK 125
EIEAIA++
Sbjct: 120 EIEAIAVR 127
>ref|NP_387929.1| (NC_000964) similar to hypothetical proteins [Bacillus subtilis]
sp|P37552|YABJ_BACSU Putative regulator of purine biosynthesis
pir||S66077 conserved hypothetical protein yabJ - Bacillus subtilis
dbj|BAA05283.1| (D26185) unknown [Bacillus subtilis]
emb|CAB11824.1| (Z99104) similar to hypothetical proteins [Bacillus subtilis]
Length = 125
Score = 119 bits (299), Expect = 5e-27
Identities = 60/124 (48%), Positives = 82/124 (65%), Gaps = 1/124 (0%)
Query: 1 MKEVIHSTLAPKAIGPYSQAIATNDLVFVSGQLGIDVSTGEFKGADIHSQTTQSMENIKA 60
M + +H+ AP AIGPYSQ I N++ + SGQ+ + S GE DI QT Q N+KA
Sbjct: 1 MTKAVHTKHAPAAIGPYSQGIIVNNMFYSSGQIPLTPS-GEMVNGDIKEQTHQVFSNLKA 59
Query: 61 ILKEAGLGMDSVVKTTILLKSLDDFAVVNGIYGSYFTEPYPARATFQVAKLPKDALVEIE 120
+L+EAG ++VVK T+ + ++ FA VN +YG YF PAR+ +VA+LPKDALVEIE
Sbjct: 60 VLEEAGASFETVVKATVFIADMEQFAEVNEVYGQYFDTHKPARSCVEVARLPKDALVEIE 119
Query: 121 AIAI 124
IA+
Sbjct: 120 VIAL 123
>ref|NP_005827.1| (NM_005836) translational inhibitor protein p14.5 [Homo sapiens]
sp|P52758|UK14_HUMAN 14.5 kDa translational inhibitor protein (p14.5) (UK114 antigen
homolog)
emb|CAA64670.1| (X95384) 14.5 kDa translational inhibitor protein, p14.5 [Homo
sapiens]
gb|AAK01939.1| (AY026764) perchloric-acid-soluble translational inhibitor p14.5
[Homo sapiens]
gb|AAH08418.1|AAH08418 (BC008418) translational inhibitor protein p14.5 [Homo sapiens]
gb|AAH12592.1|AAH12592 (BC012592) Similar to translational inhibitor protein p14.5 [Homo
sapiens]
gb|AAH10280.1|AAH10280 (BC010280) translational inhibitor protein p14.5 [Homo sapiens]
Length = 137
Score = 119 bits (299), Expect = 5e-27
Identities = 57/125 (45%), Positives = 85/125 (67%)
Query: 1 MKEVIHSTLAPKAIGPYSQAIATNDLVFVSGQLGIDVSTGEFKGADIHSQTTQSMENIKA 60
++ VI + AP AIGPYSQA+ + +++SGQ+G+D S+G+ + + Q+++N+
Sbjct: 5 IRRVISTAKAPGAIGPYSQAVLVDRTIYISGQIGMDPSSGQLVSGGVAEEAKQALKNMGE 64
Query: 61 ILKEAGLGMDSVVKTTILLKSLDDFAVVNGIYGSYFTEPYPARATFQVAKLPKDALVEIE 120
ILK AG +VVKTT+LL ++DF VN IY YF +PARA +QVA LPK + +EIE
Sbjct: 65 ILKAAGCDFTNVVKTTVLLADINDFNTVNEIYKQYFKSNFPARAAYQVAALPKGSRIEIE 124
Query: 121 AIAIK 125
A+AI+
Sbjct: 125 AVAIQ 129
>ref|NP_240929.1| (NC_002570) translation initiation inhibitor [Bacillus halodurans]
dbj|BAB03782.1| (AP001507) translation initiation inhibitor [Bacillus halodurans]
Length = 124
Score = 119 bits (299), Expect = 5e-27
Identities = 57/122 (46%), Positives = 83/122 (67%), Gaps = 1/122 (0%)
Query: 3 EVIHSTLAPKAIGPYSQAIATNDLVFVSGQLGIDVSTGEFKGADIHSQTTQSMENIKAIL 62
+V+H+ AP AIGPYSQ I N++ + SGQ+ + + GE + QT Q +N++A+L
Sbjct: 2 KVVHTNQAPDAIGPYSQGIVVNNMFYSSGQIPL-TAEGELVQGTVEEQTHQVFKNLQAVL 60
Query: 63 KEAGLGMDSVVKTTILLKSLDDFAVVNGIYGSYFTEPYPARATFQVAKLPKDALVEIEAI 122
KEAG +D+VVK T+ +K ++DF +N +YG YF PAR+ +VA+LPKD LVEIE I
Sbjct: 61 KEAGASLDTVVKATVFIKDMNDFPRINEVYGEYFQTHKPARSCVEVARLPKDVLVEIEVI 120
Query: 123 AI 124
A+
Sbjct: 121 AL 122
>ref|NP_438877.1| (NC_000907) conserved hypothetical protein [Haemophilus influenzae
Rd]
sp|P44839|YJGF_HAEIN Protein HI0719
pir||C64157 hypothetical protein HI0719 - Haemophilus influenzae (strain Rd
KW20)
gb|AAC22376.1| (U32754) conserved hypothetical protein [Haemophilus influenzae Rd]
Length = 130
Score = 119 bits (299), Expect = 5e-27
Identities = 63/129 (48%), Positives = 90/129 (68%), Gaps = 5/129 (3%)
Query: 1 MKEVIHSTLAPKAIGPYSQAIATNDLVFVSGQLGIDVSTGEFKGADIHSQTTQSMENIKA 60
M ++IH+ AP AIGPY QA+ +LV SGQ+ ++ +TGE ADI +Q QS+EN+KA
Sbjct: 2 MTQIIHTEKAPAAIGPYVQAVDLGNLVLTSGQIPVNPATGEVP-ADIVAQARQSLENVKA 60
Query: 61 ILKEAGLGMDSVVKTTILLKSLDDFAVVNGIYGSYFTE----PYPARATFQVAKLPKDAL 116
I+++AGL +VKTT+ +K L+DFA VN Y +F E +PAR+ +VA+LPKD
Sbjct: 61 IIEKAGLTAADIVKTTVFVKDLNDFAAVNAEYERFFKENNHPNFPARSCVEVARLPKDVG 120
Query: 117 VEIEAIAIK 125
+EIEAIA++
Sbjct: 121 LEIEAIAVR 129
>ref|NP_232141.1| (NC_002505) conserved hypothetical protein [Vibrio cholerae]
pir||B82067 conserved hypothetical protein VC2512 [imported] - Vibrio cholerae
(group O1 strain N16961)
gb|AAF95654.1| (AE004321) conserved hypothetical protein [Vibrio cholerae]
Length = 129
Score = 119 bits (297), Expect = 8e-27
Identities = 58/129 (44%), Positives = 90/129 (68%), Gaps = 5/129 (3%)
Query: 1 MKEVIHSTLAPKAIGPYSQAIATNDLVFVSGQLGIDVSTGEFKGADIHSQTTQSMENIKA 60
M +V+H+ AP AIGPY Q + ++V SGQ+ ++ +TGE ADI +Q QS++N+KA
Sbjct: 1 MTKVLHTDAAPAAIGPYIQGVDLGNMVLTSGQIPVNPATGEIP-ADIAAQARQSLDNVKA 59
Query: 61 ILKEAGLGMDSVVKTTILLKSLDDFAVVNGIYGSYFTE----PYPARATFQVAKLPKDAL 116
+++ +GL + +VK T+ +K L+DF VN +YG++F E YPAR+ +VA+LPKD
Sbjct: 60 VVEASGLTVGDIVKMTVFVKDLNDFGTVNQVYGAFFDEHKVAHYPARSCVEVARLPKDVG 119
Query: 117 VEIEAIAIK 125
+EIEAIA++
Sbjct: 120 IEIEAIAVR 128
>ref|NP_371021.1| (NC_002758) translation initiation inhibitor homologue
[Staphylococcus aureus subsp. aureus Mu50]
ref|NP_373707.1| (NC_002745) translation initiation inhibitor homologue
[Staphylococcus aureus subsp. aureus N315]
dbj|BAB41685.1| (AP003130) ORFID:SA0455~translation initiation inhibitor homologue
[Staphylococcus aureus subsp. aureus N315]
dbj|BAB56659.1| (AP003359) translation initiation inhibitor homologue
[Staphylococcus aureus subsp. aureus Mu50]
Length = 126
Score = 119 bits (297), Expect = 8e-27
Identities = 55/121 (45%), Positives = 85/121 (69%), Gaps = 1/121 (0%)
Query: 3 EVIHSTLAPKAIGPYSQAIATNDLVFVSGQLGIDVSTGEFKGADIHSQTTQSMENIKAIL 62
++I++T P+A+GPYS A N +V+ SGQ+ ++V G+ AD+ +QT Q +EN+K +L
Sbjct: 2 KIINTTRLPEALGPYSHATVVNGMVYTSGQIPLNVD-GKIVSADVQAQTKQVLENLKVVL 60
Query: 63 KEAGLGMDSVVKTTILLKSLDDFAVVNGIYGSYFTEPYPARATFQVAKLPKDALVEIEAI 122
+EAG ++SV K TI +K ++DF +N +YG YF E PAR+ +VA+LPKD VEIE +
Sbjct: 61 EEAGSDLNSVAKATIFIKDMNDFQKINEVYGQYFNEHKPARSCVEVARLPKDVKVEIELV 120
Query: 123 A 123
+
Sbjct: 121 S 121
>gb|AAG43443.1|AF186181_3 (AF186181) slr0709 [Synechococcus sp. PCC 7002]
Length = 121
Score = 118 bits (296), Expect = 1e-26
Identities = 60/117 (51%), Positives = 83/117 (70%), Gaps = 2/117 (1%)
Query: 10 APKAIGPYSQAIATND-LVFVSGQLGIDVSTGEFKGADIHSQTTQSMENIKAILKEAGLG 68
AP +GPY+QAIA + ++F SGQ+ +D +TG+ D+ +QT Q M N+ A+LKEAG
Sbjct: 4 APAPVGPYNQAIAASGKMLFCSGQIALDPATGQIIEGDVQAQTKQVMANLAAVLKEAGAT 63
Query: 69 MDSVVKTTILLKSLDDFAVVNGIYGSYFTE-PYPARATFQVAKLPKDALVEIEAIAI 124
++VVKT + LK ++DFA VN +Y +YF E PARA +VA+LPKD LVEIE IA+
Sbjct: 64 WENVVKTGVFLKDMNDFAAVNAVYATYFDEATAPARACVEVARLPKDVLVEIECIAV 120
>gb|AAC72281.1| (AF000167) 14.3 kDa perchloric acid soluble protein [Capra hircus]
Length = 137
Score = 118 bits (295), Expect = 1e-26
Identities = 56/125 (44%), Positives = 83/125 (65%)
Query: 1 MKEVIHSTLAPKAIGPYSQAIATNDLVFVSGQLGIDVSTGEFKGADIHSQTTQSMENIKA 60
++ +I + AP AIGPYSQA+ + +++SGQLG+D ++G+ + + Q++ NI
Sbjct: 5 VRRIISTAKAPAAIGPYSQAVLVDRTIYISGQLGMDPASGQLVPGGVVEEAKQALTNIGE 64
Query: 61 ILKEAGLGMDSVVKTTILLKSLDDFAVVNGIYGSYFTEPYPARATFQVAKLPKDALVEIE 120
ILK AG +VVK T+LL ++DF+ VN +Y YF +PARA +QVA LPK VEIE
Sbjct: 65 ILKAAGCDFTNVVKATVLLADINDFSAVNDVYKQYFQSSFPARAAYQVAALPKGGRVEIE 124
Query: 121 AIAIK 125
AIA++
Sbjct: 125 AIAVQ 129
>ref|NP_296232.1| (NC_001263) protein translation inhibitor, putative [Deinococcus
radiodurans]
pir||G75265 probable protein translation inhibitor - Deinococcus radiodurans
(strain R1)
gb|AAF12053.1|AE002080_7 (AE002080) protein translation inhibitor, putative [Deinococcus
radiodurans]
Length = 125
Score = 118 bits (295), Expect = 1e-26
Identities = 57/123 (46%), Positives = 83/123 (67%), Gaps = 1/123 (0%)
Query: 1 MKEVIHSTLAPKAIGPYSQAIATNDLVFVSGQLGIDVSTGEFKGADIHSQTTQSMENIKA 60
MK+++ + AP AIGPYSQA+ +LV SGQ+ + + GE I QT Q ++N++A
Sbjct: 1 MKDIVQTADAPAAIGPYSQAVTFGNLVVTSGQIPL-TAQGELVTGGIAEQTEQVIQNLRA 59
Query: 61 ILKEAGLGMDSVVKTTILLKSLDDFAVVNGIYGSYFTEPYPARATFQVAKLPKDALVEIE 120
+L AG +D VVKTT+ L +++F +N +Y +FT PYPAR+T QVA+LP+D VEIE
Sbjct: 60 VLAAAGTDLDRVVKTTVFLADMNEFTAMNAVYEQHFTAPYPARSTVQVARLPRDVRVEIE 119
Query: 121 AIA 123
+A
Sbjct: 120 VLA 122
>pdb|1QD9|A Chain A, Bacillus Subtilis Yabj
pdb|1QD9|B Chain B, Bacillus Subtilis Yabj
pdb|1QD9|C Chain C, Bacillus Subtilis Yabj
Length = 124
Score = 118 bits (295), Expect = 1e-26
Identities = 59/122 (48%), Positives = 81/122 (66%), Gaps = 1/122 (0%)
Query: 3 EVIHSTLAPKAIGPYSQAIATNDLVFVSGQLGIDVSTGEFKGADIHSQTTQSMENIKAIL 62
+ +H+ AP AIGPYSQ I N++ + SGQ+ + S GE DI QT Q N+KA+L
Sbjct: 2 KAVHTKHAPAAIGPYSQGIIVNNMFYSSGQIPLTPS-GEMVNGDIKEQTHQVFSNLKAVL 60
Query: 63 KEAGLGMDSVVKTTILLKSLDDFAVVNGIYGSYFTEPYPARATFQVAKLPKDALVEIEAI 122
+EAG ++VVK T+ + ++ FA VN +YG YF PAR+ +VA+LPKDALVEIE I
Sbjct: 61 EEAGASFETVVKATVFIADMEQFAEVNEVYGQYFDTHKPARSCVEVARLPKDALVEIEVI 120
Query: 123 AI 124
A+
Sbjct: 121 AL 122
>ref|NP_442684.1| (NC_000911) hypothetical protein [Synechocystis sp. PCC 6803]
sp|P52761|Y709_SYNY3 Hypothetical protein slr0709
pir||S56682 hypothetical protein 2 - Synechocystis sp. (strain PCC 6803)
dbj|BAA10755.1| (D64005) ORF_ID:slr0709~hypothetical protein [Synechocystis sp. PCC
6803]
emb|CAA54600.1| (X77454) ORF2 [Synechocystis sp.]
Length = 130
Score = 117 bits (294), Expect = 2e-26
Identities = 58/124 (46%), Positives = 84/124 (66%), Gaps = 2/124 (1%)
Query: 3 EVIHSTLAPKAIGPYSQAIATNDLVFVSGQLGIDVSTGEFKG-ADIHSQTTQSMENIKAI 61
++I + AP +GPY+QAIA N +F +GQ+ +D T G ++ Q Q + N+ A+
Sbjct: 4 KIIQTAQAPAPVGPYNQAIAANGFLFTAGQIALDPQTMTIMGEGNVEVQAKQVLTNLGAV 63
Query: 62 LKEAGLGMDSVVKTTILLKSLDDFAVVNGIYGSYFTE-PYPARATFQVAKLPKDALVEIE 120
L+EAG G ++VVKTT+ LK ++DFA VN IYG YF E PAR+ +VA+LPKD LVEI+
Sbjct: 64 LQEAGCGWENVVKTTVFLKDMNDFAAVNAIYGQYFDEATAPARSCVEVARLPKDVLVEID 123
Query: 121 AIAI 124
+A+
Sbjct: 124 CVAV 127
>sp|O52178|DFRA_MYXXA DFRA PROTEIN
gb|AAB97678.1| (AF025847) DfrA [Myxococcus xanthus]
Length = 131
Score = 117 bits (293), Expect = 2e-26
Identities = 62/125 (49%), Positives = 84/125 (66%), Gaps = 2/125 (1%)
Query: 2 KEVIHSTLAPKAIGPYSQAIATN--DLVFVSGQLGIDVSTGEFKGADIHSQTTQSMENIK 59
++ IHS APKAIGPYSQA+ + + F+SGQ+ +D +T E D+ +Q + MEN+K
Sbjct: 6 RKAIHSDQAPKAIGPYSQAVQVDAGKMTFLSGQIPLDPATMEMVQGDVVAQAERVMENLK 65
Query: 60 AILKEAGLGMDSVVKTTILLKSLDDFAVVNGIYGSYFTEPYPARATFQVAKLPKDALVEI 119
A+L +GL VV+ TI L L DFA VN +YG YFT PARAT QV+ LP+ + VEI
Sbjct: 66 AVLAASGLDFSHVVRCTIFLTDLGDFARVNEVYGRYFTGAPPARATVQVSALPRGSKVEI 125
Query: 120 EAIAI 124
+AIA+
Sbjct: 126 DAIAV 130
>ref|NP_113902.1| (NM_031714) heat-responsive protein 12 [Rattus norvegicus]
gb|AAB70815.1| (AF015949) perchloric acid soluble protein [Rattus norvegicus]
Length = 137
Score = 117 bits (292), Expect = 3e-26
Identities = 57/125 (45%), Positives = 86/125 (68%)
Query: 1 MKEVIHSTLAPKAIGPYSQAIATNDLVFVSGQLGIDVSTGEFKGADIHSQTTQSMENIKA 60
+++VI ++ AP AIG YSQA+ + ++VSGQ+G+D S+G+ + + Q+++N+
Sbjct: 5 IRKVISTSKAPAAIGAYSQAVLVDRTIYVSGQIGMDPSSGQLVPGGVAEEANQALKNLGE 64
Query: 61 ILKEAGLGMDSVVKTTILLKSLDDFAVVNGIYGSYFTEPYPARATFQVAKLPKDALVEIE 120
ILK AG +VVKTT+LL ++DF VN IY +YF PARA +QVA LPK + +EIE
Sbjct: 65 ILKAAGCDFTNVVKTTVLLADINDFGTVNEIYKTYFQGNLPARAAYQVAALPKGSRIEIE 124
Query: 121 AIAIK 125
AIA++
Sbjct: 125 AIAVQ 129
>ref|NP_346014.1| (NC_003028) endoribonuclease L-PSP [Streptococcus pneumoniae TIGR4]
ref|NP_359018.1| (NC_003098) Transcription regulator [Streptococcus pneumoniae R6]
gb|AAK75654.1| (AE007451) endoribonuclease L-PSP [Streptococcus pneumoniae TIGR4]
gb|AAL00229.1| (AE008512) Transcription regulator [Streptococcus pneumoniae R6]
Length = 126
Score = 117 bits (292), Expect = 3e-26
Identities = 60/123 (48%), Positives = 78/123 (62%)
Query: 1 MKEVIHSTLAPKAIGPYSQAIATNDLVFVSGQLGIDVSTGEFKGADIHSQTTQSMENIKA 60
M + IH+ APKAIGPY Q +L+F SGQ+ + TGE G +I QT Q ++NI A
Sbjct: 1 MAKTIHTDKAPKAIGPYVQGKIVGNLLFASGQVPLSPETGEIVGENIQEQTEQVLKNIGA 60
Query: 61 ILKEAGLGMDSVVKTTILLKSLDDFAVVNGIYGSYFTEPYPARATFQVAKLPKDALVEIE 120
IL EAG D VVKTT L ++DF N +Y + F E +PAR+ +VA+LP+D VEIE
Sbjct: 61 ILAEAGTDFDHVVKTTCFLSDMNDFVPFNEVYQTAFKEEFPARSAVEVARLPRDVKVEIE 120
Query: 121 AIA 123
IA
Sbjct: 121 VIA 123
>ref|NP_228030.1| (NC_000853) protein synthesis inhibitor, putative [Thermotoga
maritima]
pir||A72404 hypothetical protein TM0215 - Thermotoga maritima (strain MSB8)
gb|AAD35307.1|AE001706_6 (AE001706) protein synthesis inhibitor, putative [Thermotoga
maritima]
Length = 128
Score = 116 bits (291), Expect = 4e-26
Identities = 58/125 (46%), Positives = 81/125 (64%)
Query: 1 MKEVIHSTLAPKAIGPYSQAIATNDLVFVSGQLGIDVSTGEFKGADIHSQTTQSMENIKA 60
MK + + APKAIGPYSQA+ +++FVSGQ+ ID TGE I +T + +EN+KA
Sbjct: 1 MKRFVETDKAPKAIGPYSQAVVVGNMMFVSGQIPIDPETGELVQGTIEEKTERVLENLKA 60
Query: 61 ILKEAGLGMDSVVKTTILLKSLDDFAVVNGIYGSYFTEPYPARATFQVAKLPKDALVEIE 120
IL+ G + VVK T+ S+D F VN +Y YF + PAR+ VA+LP++ +EIE
Sbjct: 61 ILEAGGFSLKDVVKVTVFTTSMDYFQRVNEVYSRYFGDHRPARSFVAVAQLPRNVEIEIE 120
Query: 121 AIAIK 125
AIA+K
Sbjct: 121 AIAVK 125
>sp|P52759|UK14_RAT 14.5 kDa translational inhibitor protein (Perchrolic acid soluble
protein)
dbj|BAA08359.1| (D49363) perchrolic acid soluble protein [Rattus sp.]
Length = 137
Score = 116 bits (291), Expect = 4e-26
Identities = 57/125 (45%), Positives = 86/125 (68%)
Query: 1 MKEVIHSTLAPKAIGPYSQAIATNDLVFVSGQLGIDVSTGEFKGADIHSQTTQSMENIKA 60
+++VI ++ AP AIG YSQA+ + ++VSGQ+G+D S+G+ + + Q+++N+
Sbjct: 5 IRKVISTSKAPAAIGAYSQAVLVDRTIYVSGQIGMDPSSGQLVPGGVAEEAKQALKNLGE 64
Query: 61 ILKEAGLGMDSVVKTTILLKSLDDFAVVNGIYGSYFTEPYPARATFQVAKLPKDALVEIE 120
ILK AG +VVKTT+LL ++DF VN IY +YF PARA +QVA LPK + +EIE
Sbjct: 65 ILKAAGCDFTNVVKTTVLLADINDFGTVNEIYKTYFQGNLPARAAYQVAALPKGSRIEIE 124
Query: 121 AIAIK 125
AIA++
Sbjct: 125 AIAVQ 129
>ref|NP_290875.1| (NC_002655) orf, hypothetical protein [Escherichia coli O157:H7
EDL933]
gb|AAG59441.1|AE005657_1 (AE005657) orf, hypothetical protein [Escherichia coli O157:H7
EDL933]
Length = 141
Score = 116 bits (291), Expect = 4e-26
Identities = 58/128 (45%), Positives = 88/128 (68%), Gaps = 4/128 (3%)
Query: 1 MKEVIHSTLAPKAIGPYSQAIATNDLVFVSGQLGIDVSTGEFKGADIHSQTTQSMENIKA 60
M + I + AP AIGPY Q + +++ SGQ+ ++ TGE AD+ +Q QS++N+KA
Sbjct: 14 MSKTIATENAPAAIGPYVQGVDXGNMIITSGQIPVNPKTGEVP-ADVAAQARQSLDNVKA 72
Query: 61 ILKEAGLGMDSVVKTTILLKSLDDFAVVNGIYGSYFTE---PYPARATFQVAKLPKDALV 117
I++ AGL + +VKTT+ +K L+DFA VN Y ++FTE +PAR+ +VA+LPKD +
Sbjct: 73 IVEAAGLKVGDIVKTTVFVKDLNDFATVNATYEAFFTEHNATFPARSCVEVARLPKDVKI 132
Query: 118 EIEAIAIK 125
EIEAIA++
Sbjct: 133 EIEAIAVR 140
>pdb|1QU9|A Chain A, 1.2 A Crystal Structure Of Yjgf Gene Product From E. Coli
pdb|1QU9|B Chain B, 1.2 A Crystal Structure Of Yjgf Gene Product From E. Coli
pdb|1QU9|C Chain C, 1.2 A Crystal Structure Of Yjgf Gene Product From E. Coli
Length = 128
Score = 116 bits (291), Expect = 4e-26
Identities = 58/128 (45%), Positives = 88/128 (68%), Gaps = 4/128 (3%)
Query: 1 MKEVIHSTLAPKAIGPYSQAIATNDLVFVSGQLGIDVSTGEFKGADIHSQTTQSMENIKA 60
M + I + AP AIGPY Q + +++ SGQ+ ++ TGE AD+ +Q QS++N+KA
Sbjct: 1 MSKTIATENAPAAIGPYVQGVDLGNMIITSGQIPVNPKTGEVP-ADVAAQARQSLDNVKA 59
Query: 61 ILKEAGLGMDSVVKTTILLKSLDDFAVVNGIYGSYFTE---PYPARATFQVAKLPKDALV 117
I++ AGL + +VKTT+ +K L+DFA VN Y ++FTE +PAR+ +VA+LPKD +
Sbjct: 60 IVEAAGLKVGDIVKTTVFVKDLNDFATVNATYEAFFTEHNATFPARSXVEVARLPKDVKI 119
Query: 118 EIEAIAIK 125
EIEAIA++
Sbjct: 120 EIEAIAVR 127
>sp|P39330|YJGF_ECOLI Protein yjgF
Length = 128
Score = 116 bits (290), Expect = 5e-26
Identities = 58/128 (45%), Positives = 88/128 (68%), Gaps = 4/128 (3%)
Query: 1 MKEVIHSTLAPKAIGPYSQAIATNDLVFVSGQLGIDVSTGEFKGADIHSQTTQSMENIKA 60
M + I + AP AIGPY Q + +++ SGQ+ ++ TGE AD+ +Q QS++N+KA
Sbjct: 1 MSKTIATENAPAAIGPYVQGVDLGNMIITSGQIPVNPKTGEVP-ADVAAQARQSLDNVKA 59
Query: 61 ILKEAGLGMDSVVKTTILLKSLDDFAVVNGIYGSYFTE---PYPARATFQVAKLPKDALV 117
I++ AGL + +VKTT+ +K L+DFA VN Y ++FTE +PAR+ +VA+LPKD +
Sbjct: 60 IVEAAGLKVGDIVKTTVFVKDLNDFATVNATYEAFFTEHNATFPARSCVEVARLPKDVKI 119
Query: 118 EIEAIAIK 125
EIEAIA++
Sbjct: 120 EIEAIAVR 127
>pir||S74181 tumor antigen UK114 - goat
Length = 137
Score = 116 bits (290), Expect = 5e-26
Identities = 56/124 (45%), Positives = 81/124 (65%)
Query: 2 KEVIHSTLAPKAIGPYSQAIATNDLVFVSGQLGIDVSTGEFKGADIHSQTTQSMENIKAI 61
+E + AP AIGPYSQA+ + +++SGQLG+D ++G+ + + Q++ NI I
Sbjct: 6 EEPVGEAKAPAAIGPYSQAVLVDRTIYISGQLGMDPASGQLVPGGVVEEAKQALTNIGEI 65
Query: 62 LKEAGLGMDSVVKTTILLKSLDDFAVVNGIYGSYFTEPYPARATFQVAKLPKDALVEIEA 121
LK AG +VVK T+LL ++DF+ VN +Y YF +PARA +QVA LPK VEIEA
Sbjct: 66 LKAAGCDFTNVVKATVLLADINDFSAVNDVYKQYFQSSFPARAAYQVAALPKGGRVEIEA 125
Query: 122 IAIK 125
IA++
Sbjct: 126 IAVQ 129
>ref|NP_313247.1| (NC_002695) hypothetical protein [Escherichia coli O157:H7]
ref|NP_418664.1| (NC_000913) orf, hypothetical protein [Escherichia coli K12]
pir||S56469 hypothetical 13.5K protein (mgtA-pyrI intergenic region) -
Escherichia coli
gb|AAA97140.1| (U14003) ORF_f141 [Escherichia coli]
gb|AAC77200.1| (AE000495) orf, hypothetical protein [Escherichia coli K12]
dbj|BAB38643.1| (AP002568) hypothetical protein [Escherichia coli O157:H7]
Length = 141
Score = 116 bits (290), Expect = 5e-26
Identities = 58/128 (45%), Positives = 88/128 (68%), Gaps = 4/128 (3%)
Query: 1 MKEVIHSTLAPKAIGPYSQAIATNDLVFVSGQLGIDVSTGEFKGADIHSQTTQSMENIKA 60
M + I + AP AIGPY Q + +++ SGQ+ ++ TGE AD+ +Q QS++N+KA
Sbjct: 14 MSKTIATENAPAAIGPYVQGVDLGNMIITSGQIPVNPKTGEVP-ADVAAQARQSLDNVKA 72
Query: 61 ILKEAGLGMDSVVKTTILLKSLDDFAVVNGIYGSYFTE---PYPARATFQVAKLPKDALV 117
I++ AGL + +VKTT+ +K L+DFA VN Y ++FTE +PAR+ +VA+LPKD +
Sbjct: 73 IVEAAGLKVGDIVKTTVFVKDLNDFATVNATYEAFFTEHNATFPARSCVEVARLPKDVKI 132
Query: 118 EIEAIAIK 125
EIEAIA++
Sbjct: 133 EIEAIAVR 140
>ref|NP_458876.1| (NC_003198) conserved hypothetical protein [Salmonella enterica
subsp. enterica serovar Typhi]
ref|NP_463318.1| (NC_003197) putative translation initiation inhibitor [Salmonella
typhimurium LT2]
gb|AAD22768.1|AF095578_1 (AF095578) YjgF [Salmonella typhimurium]
gb|AAL23277.1| (AE008909) putative translation initiation inhibitor [Salmonella
typhimurium LT2]
emb|CAD06919.1| (AL627283) conserved hypothetical protein [Salmonella enterica
subsp. enterica serovar Typhi]
Length = 128
Score = 115 bits (289), Expect = 7e-26
Identities = 59/128 (46%), Positives = 85/128 (66%), Gaps = 4/128 (3%)
Query: 1 MKEVIHSTLAPKAIGPYSQAIATNDLVFVSGQLGIDVSTGEFKGADIHSQTTQSMENIKA 60
M + I + AP AIGPY Q + +V SGQ+ +D TG D+ +Q QS+EN+KA
Sbjct: 1 MSKTIATENAPAAIGPYVQGVDLGSMVITSGQIPVDPKTGAV-AEDVSAQARQSLENVKA 59
Query: 61 ILKEAGLGMDSVVKTTILLKSLDDFAVVNGIYGSYFTE---PYPARATFQVAKLPKDALV 117
I++ AGL + +VKTT+ +K L+DFA VN Y ++FTE +PAR+ +VA+LPKD +
Sbjct: 60 IVEAAGLKVGDIVKTTVFVKDLNDFATVNATYEAFFTEHNATFPARSCVEVARLPKDVKI 119
Query: 118 EIEAIAIK 125
EIEAIA++
Sbjct: 120 EIEAIAVR 127
>sp|P97117|Y142_LEUMC HYPOTHETICAL 14.2 KD PROTEIN
gb|AAB48552.1| (U50749) unknown [Leuconostoc mesenteroides subsp. cremoris]
Length = 130
Score = 115 bits (288), Expect = 9e-26
Identities = 60/128 (46%), Positives = 81/128 (62%), Gaps = 4/128 (3%)
Query: 2 KEVIHSTLAPKAIGPYSQAIATNDLVFVSGQLGIDVSTGEFKGADIHSQTTQSMENIKAI 61
K+V+ +T APKA+GPYSQAI ++ +++SGQ+GID T EF GA Q Q +NI I
Sbjct: 3 KKVVSTTTAPKALGPYSQAILNDNTLYISGQIGIDPETDEFAGATTAEQAHQIFDNIDNI 62
Query: 62 LKEAGLGMDSVVKTTILLKSLDDFAVVNGIYGSYF----TEPYPARATFQVAKLPKDALV 117
L EA + +VK + + DFA+VN IY YF E +PAR+ QVA LPK+A +
Sbjct: 63 LHEAEFSRNDIVKAALFFDDIADFALVNDIYAQYFDTTSVEEFPARSAVQVAALPKNAKL 122
Query: 118 EIEAIAIK 125
EIE A+K
Sbjct: 123 EIEITAMK 130
>ref|NP_404266.1| (NC_003143) putative translational inhibitor protein [Yersinia
pestis]
emb|CAC89481.1| (AJ414143) putative translational inhibitor protein [Yersinia
pestis]
Length = 126
Score = 115 bits (287), Expect = 1e-25
Identities = 61/124 (49%), Positives = 83/124 (66%), Gaps = 1/124 (0%)
Query: 1 MKEVIHSTLAPKAIGPYSQAIATNDLVFVSGQLGIDVSTGEFKGADIHSQTTQSMENIKA 60
MK VI + AP AIGPYSQAI N +++ SGQ+ I+ TG+ DI QT Q ++NI A
Sbjct: 1 MKSVIETKNAPSAIGPYSQAICFNGILYASGQIPINPDTGDLVENDIEKQTRQVLKNIDA 60
Query: 61 ILKEAGLGMDSVVKTTILLKSLDDFAVVNGIYGSYFTEP-YPARATFQVAKLPKDALVEI 119
+L +AG D +VKTTI + ++++ + VN IY YF +PAR+T +V+ LPK ALVEI
Sbjct: 61 VLLQAGTTKDKIVKTTIFITNINNSSQVNDIYADYFKGTIFPARSTVEVSALPKGALVEI 120
Query: 120 EAIA 123
E IA
Sbjct: 121 EVIA 124
>sp|P42631|TDCF_ECOLI TdcF protein
Length = 129
Score = 113 bits (282), Expect = 4e-25
Identities = 57/128 (44%), Positives = 82/128 (63%), Gaps = 4/128 (3%)
Query: 1 MKEVIHSTLAPKAIGPYSQAIATNDLVFVSGQLGIDVSTGEFKGADIHSQTTQSMENIKA 60
MK++I + AP AIGPY Q + +VF SGQ+ + TGE AD+ Q S+EN+KA
Sbjct: 1 MKKIIETQRAPGAIGPYVQGVDLGSMVFTSGQIPVCPQTGEIP-ADVQDQARLSLENVKA 59
Query: 61 ILKEAGLGMDSVVKTTILLKSLDDFAVVNGIYGSYFTE---PYPARATFQVAKLPKDALV 117
I+ AGL + ++K T+ + L+DFA +N +Y +F E YP R+ QVA+LPKD +
Sbjct: 60 IVVAAGLSVGDIIKMTVFITDLNDFATINEVYKQFFDEHQATYPTRSCVQVARLPKDVKL 119
Query: 118 EIEAIAIK 125
EIEAIA++
Sbjct: 120 EIEAIAVR 127
>ref|NP_417583.1| (NC_000913) orf, hypothetical protein [Escherichia coli K12]
pir||F65100 hypothetical 16.3 kD protein in exuR-tdcC intergenic region -
Escherichia coli (strain K-12)
gb|AAA57917.1| (U18997) ORF_f150 [Escherichia coli]
gb|AAC76148.1| (AE000393) orf, hypothetical protein [Escherichia coli K12]
Length = 150
Score = 113 bits (282), Expect = 4e-25
Identities = 57/128 (44%), Positives = 82/128 (63%), Gaps = 4/128 (3%)
Query: 1 MKEVIHSTLAPKAIGPYSQAIATNDLVFVSGQLGIDVSTGEFKGADIHSQTTQSMENIKA 60
MK++I + AP AIGPY Q + +VF SGQ+ + TGE AD+ Q S+EN+KA
Sbjct: 22 MKKIIETQRAPGAIGPYVQGVDLGSMVFTSGQIPVCPQTGEIP-ADVQDQARLSLENVKA 80
Query: 61 ILKEAGLGMDSVVKTTILLKSLDDFAVVNGIYGSYFTE---PYPARATFQVAKLPKDALV 117
I+ AGL + ++K T+ + L+DFA +N +Y +F E YP R+ QVA+LPKD +
Sbjct: 81 IVVAAGLSVGDIIKMTVFITDLNDFATINEVYKQFFDEHQATYPTRSCVQVARLPKDVKL 140
Query: 118 EIEAIAIK 125
EIEAIA++
Sbjct: 141 EIEAIAVR 148
>sp|P80601|UK14_CAPHI 14.5 kDa translational inhibitor protein (UK114 antigen)
Length = 137
Score = 113 bits (282), Expect = 4e-25
Identities = 55/124 (44%), Positives = 80/124 (64%)
Query: 2 KEVIHSTLAPKAIGPYSQAIATNDLVFVSGQLGIDVSTGEFKGADIHSQTTQSMENIKAI 61
+E + AP AIG YSQA+ + +++SGQLG+D ++G+ + + Q++ NI I
Sbjct: 6 EEPVGEAKAPAAIGTYSQAVLVDRTIYISGQLGMDPASGQLVPGGVVEEAKQALTNIGEI 65
Query: 62 LKEAGLGMDSVVKTTILLKSLDDFAVVNGIYGSYFTEPYPARATFQVAKLPKDALVEIEA 121
LK AG +VVK T+LL ++DF+ VN +Y YF +PARA +QVA LPK VEIEA
Sbjct: 66 LKAAGCDFTNVVKATVLLADINDFSAVNDVYKQYFQSSFPARAAYQVAALPKGGRVEIEA 125
Query: 122 IAIK 125
IA++
Sbjct: 126 IAVQ 129
>ref|NP_289685.1| (NC_002655) orf, hypothetical protein [Escherichia coli O157:H7
EDL933]
ref|NP_312020.1| (NC_002695) hypothetical protein [Escherichia coli O157:H7]
gb|AAG58244.1|AE005540_9 (AE005540) orf, hypothetical protein [Escherichia coli O157:H7
EDL933]
dbj|BAB37416.1| (AP002564) hypothetical protein [Escherichia coli O157:H7]
Length = 150
Score = 113 bits (282), Expect = 4e-25
Identities = 57/128 (44%), Positives = 82/128 (63%), Gaps = 4/128 (3%)
Query: 1 MKEVIHSTLAPKAIGPYSQAIATNDLVFVSGQLGIDVSTGEFKGADIHSQTTQSMENIKA 60
MK++I + AP AIGPY Q + +VF SGQ+ + TGE AD+ Q S+EN+KA
Sbjct: 22 MKKIIETQRAPGAIGPYVQGVDLGSMVFTSGQIPVCPQTGEIP-ADVQDQARLSLENVKA 80
Query: 61 ILKEAGLGMDSVVKTTILLKSLDDFAVVNGIYGSYFTE---PYPARATFQVAKLPKDALV 117
I+ AGL + ++K T+ + L+DFA +N +Y +F E YP R+ QVA+LPKD +
Sbjct: 81 IVVAAGLSVGDIIKMTVFITDLNDFATINEVYKQFFDEHQATYPTRSCVQVARLPKDVKL 140
Query: 118 EIEAIAIK 125
EIEAIA++
Sbjct: 141 EIEAIAVR 148
>ref|NP_609747.1| (NM_135903) BG:DS07851.3 gene product [Drosophila melanogaster]
gb|AAF44934.1|AE003406_139 (AE003416) symbol=BG:DS07851.3; cDNA=method:''sim4'',
score:''1000.0'', desc:''GM01181 GM Drosophila
melanogaster ovary BlueScript Drosophila melanogaster
cDNA clone, full length mRNA sequence from BDGP'';
match=method:''BLASTX'', version:''2.0a19MP-Wa>
gb|AAF53452.1| (AE003647) BG:DS07851.3 gene product [Drosophila melanogaster]
gb|AAM50212.1| (AY119558) GM01181p [Drosophila melanogaster]
Length = 138
Score = 112 bits (280), Expect = 7e-25
Identities = 55/124 (44%), Positives = 82/124 (65%)
Query: 1 MKEVIHSTLAPKAIGPYSQAIATNDLVFVSGQLGIDVSTGEFKGADIHSQTTQSMENIKA 60
++++I + A K + PY+QA+ + V+VSG LG+D T + Q +++EN++A
Sbjct: 5 VRKLISTANAAKPVAPYNQAVVADRTVYVSGCLGLDKDTMKLVPGGPTEQAQKALENLEA 64
Query: 61 ILKEAGLGMDSVVKTTILLKSLDDFAVVNGIYGSYFTEPYPARATFQVAKLPKDALVEIE 120
+LK A G+D V+K T+ LK L+DF VN +Y F + +PAR+ FQVAKLP DALVEIE
Sbjct: 65 VLKAADSGVDKVIKNTVFLKDLNDFGAVNEVYKRVFNKDFPARSCFQVAKLPMDALVEIE 124
Query: 121 AIAI 124
IA+
Sbjct: 125 CIAL 128
>ref|NP_458332.1| (NC_003198) putative regulatory protein [Salmonella enterica subsp.
enterica serovar Typhi]
emb|CAD08040.1| (AL627281) putative regulatory protein [Salmonella enterica subsp.
enterica serovar Typhi]
Length = 126
Score = 111 bits (277), Expect = 2e-24
Identities = 59/125 (47%), Positives = 79/125 (63%)
Query: 1 MKEVIHSTLAPKAIGPYSQAIATNDLVFVSGQLGIDVSTGEFKGADIHSQTTQSMENIKA 60
MKE+I + AP AIG YSQ A +L+F SGQL I+ +G+ + DI QT QS+ N+ A
Sbjct: 1 MKEIIFTETAPAAIGSYSQGNAMGNLIFTSGQLPINADSGKIETDDIQEQTRQSLLNLLA 60
Query: 61 ILKEAGLGMDSVVKTTILLKSLDDFAVVNGIYGSYFTEPYPARATFQVAKLPKDALVEIE 120
++K AG D+V+KTT L + DFA N +Y S+F PAR+ F V LP A VEIE
Sbjct: 61 VVKMAGGDTDTVLKTTCFLSDMADFAAFNDVYASFFKINPPARSCFAVKTLPMGARVEIE 120
Query: 121 AIAIK 125
A+A +
Sbjct: 121 AVAFR 125
>ref|NP_638585.1| (NC_003902) translation initiation inhibitor [Xanthomonas
campestris pv. campestris str. ATCC 33913]
gb|AAM42509.1| (AE012441) translation initiation inhibitor [Xanthomonas campestris
pv. campestris str. ATCC 33913]
Length = 126
Score = 111 bits (277), Expect = 2e-24
Identities = 51/124 (41%), Positives = 80/124 (64%)
Query: 1 MKEVIHSTLAPKAIGPYSQAIATNDLVFVSGQLGIDVSTGEFKGADIHSQTTQSMENIKA 60
M ++IH+ AP AIGPYSQA+ + V+ SGQ+ +D +TGE DI +Q ++ +N+KA
Sbjct: 1 MSQIIHTDQAPAAIGPYSQAVRAGNTVYFSGQIPLDPATGEIVPGDIGAQARRAFDNLKA 60
Query: 61 ILKEAGLGMDSVVKTTILLKSLDDFAVVNGIYGSYFTEPYPARATFQVAKLPKDALVEIE 120
+ + AG +D +V+ + L L FA VN + YF P+PAR+T +V+ LPK A E++
Sbjct: 61 VAEAAGGSLDKIVRLGLYLTDLGQFAAVNAVMQEYFQAPFPARSTIEVSGLPKGAGFEVD 120
Query: 121 AIAI 124
A+ +
Sbjct: 121 AVMV 124
>ref|NP_487909.1| (NC_003272) hypothetical protein [Nostoc sp. PCC 7120]
dbj|BAB75568.1| (AP003594) ORF_ID:all3869~hypothetical protein [Nostoc sp. PCC
7120]
Length = 376
Score = 110 bits (276), Expect = 2e-24
Identities = 61/125 (48%), Positives = 83/125 (65%), Gaps = 3/125 (2%)
Query: 3 EVIHSTLAPKAIGPYSQAIATND-LVFVSGQLGIDVSTGEFKGAD-IHSQTTQSMENIKA 60
+VI + AP +GPY+QAIA + L+FV+GQ+ ID G+ D + QT Q NI+A
Sbjct: 248 QVIRTDKAPAPVGPYNQAIAASGKLLFVAGQIAIDPRLGDVVYTDDVKKQTEQVFANIQA 307
Query: 61 ILKEAGLGMDSVVKTTILLKSLDDFAVVNGIYGSYFTE-PYPARATFQVAKLPKDALVEI 119
IL+ AG+ +VVKTT+ L ++DFA VN +Y YF E PARA +V++LPKD LVEI
Sbjct: 308 ILQAAGIKFSNVVKTTVFLADMNDFAAVNAVYAKYFEEATAPARACVEVSRLPKDVLVEI 367
Query: 120 EAIAI 124
E IA+
Sbjct: 368 ECIAV 372
>ref|NP_267385.1| (NC_002662) regulatory protein AldR [Lactococcus lactis subsp.
lactis]
sp|O34133|ALDR_LACLA Putative regulator aldR
gb|AAK05327.1|AE006355_2 (AE006355) regulatory protein AldR [Lactococcus lactis subsp.
lactis]
Length = 126
Score = 110 bits (275), Expect = 3e-24
Identities = 57/121 (47%), Positives = 78/121 (64%)
Query: 3 EVIHSTLAPKAIGPYSQAIATNDLVFVSGQLGIDVSTGEFKGADIHSQTTQSMENIKAIL 62
++I + AP AIGPY Q N L++ SGQ+ ++ GE G I +QT Q M+NI AIL
Sbjct: 2 KIIATLDAPAAIGPYVQGKIVNGLLYASGQIPLNPLNGEIVGDSIETQTEQVMKNISAIL 61
Query: 63 KEAGLGMDSVVKTTILLKSLDDFAVVNGIYGSYFTEPYPARATFQVAKLPKDALVEIEAI 122
KEA D V+KTT LK+++DF+ N IY +F + +PAR+ VA LPK+ L+EIE I
Sbjct: 62 KEAHSDFDLVIKTTCFLKNIEDFSRFNAIYSKFFDKEFPARSAVGVAGLPKNVLIEIEVI 121
Query: 123 A 123
A
Sbjct: 122 A 122
>ref|NP_643699.1| (NC_003919) translation initiation inhibitor [Xanthomonas
axonopodis pv. citri str. 306]
gb|AAM38235.1| (AE011985) translation initiation inhibitor [Xanthomonas axonopodis
pv. citri str. 306]
Length = 126
Score = 110 bits (275), Expect = 3e-24
Identities = 50/124 (40%), Positives = 80/124 (64%)
Query: 1 MKEVIHSTLAPKAIGPYSQAIATNDLVFVSGQLGIDVSTGEFKGADIHSQTTQSMENIKA 60
M ++IH+ AP AIGPYSQA+ + V+ SGQ+ +D +TGE DI +Q ++ +N+KA
Sbjct: 1 MSQIIHTDQAPAAIGPYSQAVRAGNTVYFSGQIPLDPATGEIVPGDIGAQARRAFDNLKA 60
Query: 61 ILKEAGLGMDSVVKTTILLKSLDDFAVVNGIYGSYFTEPYPARATFQVAKLPKDALVEIE 120
+ + AG +D +V+ + + L FA VN + YF P+PAR+T +V+ LPK A E++
Sbjct: 61 VAEAAGGSLDKIVRLGLYITDLGQFAAVNAVMQEYFQAPFPARSTIEVSGLPKGAGFEVD 120
Query: 121 AIAI 124
A+ +
Sbjct: 121 AVMV 124
>gb|AAL11406.1| (AY056454) YabJ [Staphylococcus epidermidis]
Length = 126
Score = 108 bits (270), Expect = 1e-23
Identities = 54/120 (45%), Positives = 77/120 (64%), Gaps = 1/120 (0%)
Query: 3 EVIHSTLAPKAIGPYSQAIATNDLVFVSGQLGIDVSTGEFKGADIHSQTTQSMENIKAIL 62
++I+S P+A+GPYS A N VF SGQ+ + + G D+ QT Q +EN+ +L
Sbjct: 2 KIINSDKVPEALGPYSHATVINGFVFTSGQIPLTLD-GTIVSDDVQEQTKQVLENLTVVL 60
Query: 63 KEAGLGMDSVVKTTILLKSLDDFAVVNGIYGSYFTEPYPARATFQVAKLPKDALVEIEAI 122
KEA ++SVVK TI + ++DF +N IYG+YF E PAR+ +V++LPKD VEIE I
Sbjct: 61 KEADSDLNSVVKATIYISDMNDFQQINQIYGNYFVEHQPARSCVEVSRLPKDVKVEIELI 120
>gb|EAA01942.1| (AAAB01001370) agCP7554 [Anopheles gambiae str. PEST]
Length = 126
Score = 108 bits (270), Expect = 1e-23
Identities = 64/126 (50%), Positives = 85/126 (66%), Gaps = 3/126 (2%)
Query: 1 MKEVIHSTLAPKAIGPYSQAIATNDLVFVSGQLGIDVSTGEFKGADIHSQTTQSMENIKA 60
MKE+I + AP AIGPYSQA N ++++SGQ+ +D +TG+ I +T Q M+N++A
Sbjct: 2 MKEIISTDNAPAAIGPYSQANMINGVLYISGQIPMDPATGKILDG-IEKETHQVMKNLQA 60
Query: 61 ILKEAGLGMDSVVKTTILLKSLDDFAVVNGIYGSYF-TEPYPARATFQVAKLPKDALVEI 119
IL AGL VVK+TI LK++DDF V+N IY SY + YPAR T QV+ LPK+ VEI
Sbjct: 61 ILDAAGLTFRDVVKSTIFLKNMDDF-VMNDIYASYLDSSCYPARETVQVSCLPKNVNVEI 119
Query: 120 EAIAIK 125
IA K
Sbjct: 120 SMIAHK 125
>ref|NP_376715.1| (NC_003106) 125aa long hypothetical translational inhibitor protein
[Sulfolobus tokodaii]
sp|Q973T6|Y811_SULTO Hypothetical protein ST0811
dbj|BAB65824.1| (AP000983) 125aa long hypothetical translational inhibitor protein
[Sulfolobus tokodaii]
Length = 125
Score = 108 bits (269), Expect = 1e-23
Identities = 54/123 (43%), Positives = 74/123 (59%)
Query: 3 EVIHSTLAPKAIGPYSQAIATNDLVFVSGQLGIDVSTGEFKGADIHSQTTQSMENIKAIL 62
E + + APK +GPYSQAI + ++VSGQ+ ID T E DI QT Q ++NIK I+
Sbjct: 2 ETVFTEKAPKPVGPYSQAIKVGNTLYVSGQIPIDPRTNEIVKGDIKVQTRQVLDNIKEIV 61
Query: 63 KEAGLGMDSVVKTTILLKSLDDFAVVNGIYGSYFTEPYPARATFQVAKLPKDALVEIEAI 122
K AG + V + LK ++ F N +Y YF + PAR T +V++LPKDAL+EI I
Sbjct: 62 KAAGFSLSDVAMAFVFLKDMNMFNDFNSVYAEYFKDKPPARVTVEVSRLPKDALIEIAVI 121
Query: 123 AIK 125
K
Sbjct: 122 CSK 124
>ref|NP_254026.1| (NC_002516) conserved hypothetical protein [Pseudomonas aeruginosa]
pir||A82979 conserved hypothetical protein PA5339 [imported] - Pseudomonas
aeruginosa (strain PAO1)
gb|AAG08724.1|AE004946_8 (AE004946) conserved hypothetical protein [Pseudomonas aeruginosa]
Length = 126
Score = 107 bits (268), Expect = 2e-23
Identities = 60/123 (48%), Positives = 75/123 (60%), Gaps = 1/123 (0%)
Query: 2 KEVIHSTLAPKAIGPYSQAIATNDLVFVSGQLGIDVSTGEFKGADIHSQTTQSMENIKAI 61
K VIH+ AP AIG YSQAI + V+VSGQ+ +D T E QT Q EN+KA+
Sbjct: 3 KTVIHTDNAPAAIGTYSQAIKAGNTVYVSGQIPLDPKTMELVEG-FEEQTVQVFENLKAV 61
Query: 62 LKEAGLGMDSVVKTTILLKSLDDFAVVNGIYGSYFTEPYPARATFQVAKLPKDALVEIEA 121
++ +G + V K I L L FA VN I G YFT+PYPARA VA LPK A VE++A
Sbjct: 62 IEASGGYLHDVAKLNIFLTDLSHFAKVNEIMGRYFTQPYPARAAIGVAALPKGAQVEMDA 121
Query: 122 IAI 124
I +
Sbjct: 122 IVV 124
>gb|AAB81924.1| (U92974) aldR [Lactococcus lactis]
Length = 126
Score = 107 bits (267), Expect = 2e-23
Identities = 56/121 (46%), Positives = 77/121 (63%)
Query: 3 EVIHSTLAPKAIGPYSQAIATNDLVFVSGQLGIDVSTGEFKGADIHSQTTQSMENIKAIL 62
++I + AP AIGPY Q N L++ SGQ+ ++ GE G I +QT Q M+NI AIL
Sbjct: 2 KIIATLDAPAAIGPYVQGKIVNGLLYASGQIPLNPLNGEIVGDSIETQTEQVMKNISAIL 61
Query: 63 KEAGLGMDSVVKTTILLKSLDDFAVVNGIYGSYFTEPYPARATFQVAKLPKDALVEIEAI 122
KEA D V+KTT LK+++DF+ N IY +F + + AR+ VA LPK+ L+EIE I
Sbjct: 62 KEAHSDFDLVIKTTCFLKNIEDFSRFNAIYSKFFDKEFAARSAVGVAGLPKNVLIEIEVI 121
Query: 123 A 123
A
Sbjct: 122 A 122
>pir||B44514 hypothetical protein 1 (vnfA 5' region) - Azotobacter vinelandii
Length = 127
Score = 107 bits (266), Expect = 3e-23
Identities = 55/123 (44%), Positives = 74/123 (59%)
Query: 2 KEVIHSTLAPKAIGPYSQAIATNDLVFVSGQLGIDVSTGEFKGADIHSQTTQSMENIKAI 61
K VI++ AP AIG YSQAI D V++SGQ+ +D T E D +QT + EN+KA+
Sbjct: 3 KSVINTDKAPAAIGTYSQAIRAGDTVYLSGQIPLDPGTMELVEGDFEAQTVRVFENLKAV 62
Query: 62 LKEAGLGMDSVVKTTILLKSLDDFAVVNGIYGSYFTEPYPARATFQVAKLPKDALVEIEA 121
++ AG +VK I L L FA VN + G YF +PYPARA A LP+ A VE++
Sbjct: 63 VEAAGGSFADIVKLNIFLTDLAHFAKVNEVMGRYFAQPYPARAAIACASLPRGAQVEMDG 122
Query: 122 IAI 124
I +
Sbjct: 123 ILV 125
>ref|NP_405246.1| (NC_003143) YjgF-family lipoprotein [Yersinia pestis]
emb|CAC90491.1| (AJ414149) YjgF-family lipoprotein [Yersinia pestis]
Length = 125
Score = 104 bits (259), Expect = 2e-22
Identities = 53/120 (44%), Positives = 76/120 (63%), Gaps = 1/120 (0%)
Query: 4 VIHSTLAPKAIGPYSQAIATNDLVFVSGQLGIDVSTGEFKGADIHSQTTQSMENIKAILK 63
+I + AP AIGPYSQ + +L+F+SG G G DI QT Q+M+N+KAI++
Sbjct: 2 IIKTQNAPAAIGPYSQGVVAGNLLFISGCCPFSEKDGSVVGIDITEQTIQAMKNLKAIVE 61
Query: 64 EAGLGMDSVVKTTILLKSLDDFAVVNGIYGSYF-TEPYPARATFQVAKLPKDALVEIEAI 122
G M+ VVKTT + +++F N IY YF + +PAR+ +VA+LPKD L+E+EAI
Sbjct: 62 ATGSYMNDVVKTTCFISDMNNFQSFNTIYAGYFPSGTFPARSCVEVARLPKDVLIEVEAI 121
>sp|P40431|YVN1_AZOVI HYPOTHETICAL 13.5 KD PROTEIN IN VNFA 5'REGION (ORF1)
gb|AAA82514.1| (M26752) ORF 1; putative [Azotobacter vinelandii]
Length = 127
Score = 102 bits (254), Expect = 8e-22
Identities = 54/123 (43%), Positives = 72/123 (57%)
Query: 2 KEVIHSTLAPKAIGPYSQAIATNDLVFVSGQLGIDVSTGEFKGADIHSQTTQSMENIKAI 61
K VI++ AP AIG YSQAI D V++SGQ+ +D T E D +QT + EN+KA+
Sbjct: 3 KSVINTDKAPAAIGTYSQAIRAGDTVYLSGQIPLDPGTMELVEGDFEAQTVRVFENLKAV 62
Query: 62 LKEAGLGMDSVVKTTILLKSLDDFAVVNGIYGSYFTEPYPARATFQVAKLPKDALVEIEA 121
++ AG +VK I L L FA N G YF +PYPARA A LP+ A VE++
Sbjct: 63 VEAAGGSFADIVKLNIFLTDLAHFANGNECMGRYFAQPYPARAAIACASLPRGAQVEMDG 122
Query: 122 IAI 124
I +
Sbjct: 123 ILV 125
>gb|EAA11312.1| (AAAB01008960) agCP5758 [Anopheles gambiae str. PEST]
Length = 152
Score = 102 bits (253), Expect = 1e-21
Identities = 52/124 (41%), Positives = 79/124 (62%)
Query: 1 MKEVIHSTLAPKAIGPYSQAIATNDLVFVSGQLGIDVSTGEFKGADIHSQTTQSMENIKA 60
+++VI + PKA+ PY+QAI + V+ SG LG+++ T + +QT +++E++
Sbjct: 20 VRKVISTKKCPKALAPYNQAIVADRTVYCSGVLGMELDTLKLVPGGAAAQTAKALEHLTN 79
Query: 61 ILKEAGLGMDSVVKTTILLKSLDDFAVVNGIYGSYFTEPYPARATFQVAKLPKDALVEIE 120
+L EAG G+D VVKTT+LL ++D+A VN Y F +PAR + KLP A VEIE
Sbjct: 80 LLSEAGSGIDKVVKTTVLLGDMNDYATVNEEYKKVFNSSFPARTCYGGVKLPLGAAVEIE 139
Query: 121 AIAI 124
AIA+
Sbjct: 140 AIAL 143
>ref|NP_297643.1| (NC_002488) translation initiation inhibitor [Xylella fastidiosa
9a5c]
pir||B82817 translation initiation inhibitor XF0353 [imported] - Xylella
fastidiosa (strain 9a5c)
gb|AAF83163.1|AE003887_6 (AE003887) translation initiation inhibitor [Xylella fastidiosa
9a5c]
Length = 127
Score = 101 bits (252), Expect = 1e-21
Identities = 47/122 (38%), Positives = 76/122 (61%)
Query: 3 EVIHSTLAPKAIGPYSQAIATNDLVFVSGQLGIDVSTGEFKGADIHSQTTQSMENIKAIL 62
+ IH+ AP AIGPYSQA+ + V+ SGQ+ +D +TG D+ Q ++ +N++A+
Sbjct: 4 QTIHTEKAPAAIGPYSQAVRVGNTVYFSGQIPLDPATGTIVVGDLAVQARRAFDNLRAVA 63
Query: 63 KEAGLGMDSVVKTTILLKSLDDFAVVNGIYGSYFTEPYPARATFQVAKLPKDALVEIEAI 122
+ A + +V+ + L L+ FAVVN + YF P+PAR+T QV+ LPK A E++A+
Sbjct: 64 EAANGSLSKIVRLGLYLTDLEQFAVVNAVMQEYFQAPFPARSTIQVSGLPKGADFEVDAV 123
Query: 123 AI 124
+
Sbjct: 124 MV 125
>ref|NP_147983.1| (NC_000854) hypothetical protein [Aeropyrum pernix]
pir||F72630 hypothetical protein APE1501 - Aeropyrum pernix (strain K1)
dbj|BAA80500.1| (AP000061) 123aa long hypothetical protein [Aeropyrum pernix]
Length = 123
Score = 100 bits (250), Expect = 2e-21
Identities = 47/113 (41%), Positives = 70/113 (61%)
Query: 10 APKAIGPYSQAIATNDLVFVSGQLGIDVSTGEFKGADIHSQTTQSMENIKAILKEAGLGM 69
APK +GPYSQA+ + +FVSGQ+ I+ TG + ++++N+KAI++ AG M
Sbjct: 4 APKPVGPYSQAVESGCFMFVSGQIPINPETGALEEGGFKESAKRALDNLKAIVEGAGYSM 63
Query: 70 DSVVKTTILLKSLDDFAVVNGIYGSYFTEPYPARATFQVAKLPKDALVEIEAI 122
D +VK T+ + + F+ N +Y YF PYPARA VA LP A +E+EA+
Sbjct: 64 DDIVKVTVYITDISRFSEFNEVYREYFNRPYPARAVVGVAALPLGAPLEVEAV 116
>ref|NP_280763.1| (NC_002607) Vng2099c [Halobacterium sp. NRC-1]
gb|AAG20243.1| (AE005099) Vng2099c [Halobacterium sp. NRC-1]
Length = 127
Score = 100 bits (250), Expect = 2e-21
Identities = 54/123 (43%), Positives = 72/123 (57%)
Query: 1 MKEVIHSTLAPKAIGPYSQAIATNDLVFVSGQLGIDVSTGEFKGADIHSQTTQSMENIKA 60
MK I + AP A+G YSQA D+VF +GQ+ + I QT QS+EN+KA
Sbjct: 1 MKRPIETADAPAAVGAYSQAATDGDVVFTAGQIPMTPDGELIADEPIDVQTRQSLENVKA 60
Query: 61 ILKEAGLGMDSVVKTTILLKSLDDFAVVNGIYGSYFTEPYPARATFQVAKLPKDALVEIE 120
IL+ GL M V+K ++ + +DDF +N Y YF + PAR+ +VA LPK VEIE
Sbjct: 61 ILEAEGLNMQDVLKVSVFMDDMDDFDAMNAAYKEYFQDNPPARSAVEVAALPKGVGVEIE 120
Query: 121 AIA 123
AIA
Sbjct: 121 AIA 123
>ref|NP_273704.1| (NC_003112) ribonuclease, putative [Neisseria meningitidis MC58]
pir||F81174 ribonuclease, probable NMB0662 [imported] - Neisseria meningitidis
(group B strain MD58)
gb|AAF41080.1| (AE002420) ribonuclease, putative [Neisseria meningitidis MC58]
Length = 129
Score = 94.7 bits (234), Expect = 2e-19
Identities = 49/124 (39%), Positives = 72/124 (57%), Gaps = 1/124 (0%)
Query: 2 KEVIHSTLAPKAIGPYSQAIATNDLVFVSGQLGIDVSTGEFKG-ADIHSQTTQSMENIKA 60
K +IH+ AP AIG YSQA+ D V++SGQ+ +D +T G D ++ Q +N++A
Sbjct: 3 KTIIHTDKAPAAIGAYSQAVRAGDTVYMSGQIPLDPATMTVVGNGDFRAEARQVFQNLQA 62
Query: 61 ILKEAGLGMDSVVKTTILLKSLDDFAVVNGIYGSYFTEPYPARATFQVAKLPKDALVEIE 120
+ + AG + +VK L L +FAV N + + EP+PARA VA LPK VE E
Sbjct: 63 VAEAAGGTLADIVKLNAYLTDLGNFAVFNEVMAEFIAEPFPARAAVGVASLPKGVQVEAE 122
Query: 121 AIAI 124
A+ +
Sbjct: 123 AVLV 126
>ref|NP_283653.1| (NC_003116) hypothetical protein NMA0861 [Neisseria meningitidis
Z2491]
pir||A81932 hypothetical protein NMA0861 [imported] - Neisseria meningitidis
(group A strain Z2491)
emb|CAB84142.1| (AL162754) hypothetical protein NMA0861 [Neisseria meningitidis
Z2491]
Length = 129
Score = 94.0 bits (232), Expect = 3e-19
Identities = 49/124 (39%), Positives = 72/124 (57%), Gaps = 1/124 (0%)
Query: 2 KEVIHSTLAPKAIGPYSQAIATNDLVFVSGQLGIDVSTGEFKG-ADIHSQTTQSMENIKA 60
K +IH+ AP AIG YSQA+ D V++SGQ+ +D +T G D ++ Q +N++A
Sbjct: 3 KTIIHTDKAPAAIGAYSQAVRAGDTVYMSGQIPLDPATMTVVGNGDFRAEARQVFKNLQA 62
Query: 61 ILKEAGLGMDSVVKTTILLKSLDDFAVVNGIYGSYFTEPYPARATFQVAKLPKDALVEIE 120
+ + AG + +VK L L +FAV N + + EP+PARA VA LPK VE E
Sbjct: 63 VAEAAGGTLADIVKLNAYLTDLANFAVFNEVMAEFIAEPFPARAAVGVASLPKGVQVEAE 122
Query: 121 AIAI 124
A+ +
Sbjct: 123 AVLV 126
>ref|NP_213249.1| (NC_000918) hypothetical protein [Aquifex aeolicus]
sp|O66689|Y364_AQUAE Hypothetical protein AQ_364
pir||E70332 conserved hypothetical protein aq_364 - Aquifex aeolicus
gb|AAC06655.1| (AE000686) hypothetical protein [Aquifex aeolicus]
Length = 125
Score = 93.6 bits (231), Expect = 4e-19
Identities = 52/123 (42%), Positives = 74/123 (59%), Gaps = 3/123 (2%)
Query: 5 IHSTLAPKAIGPYSQAIATNDLVFVSGQLGIDVSTGEFKGADIHSQTTQSMENIKAILKE 64
I + AP +GPYSQA+ N +F+SGQ+GI+ TG+ Q Q +N+ AIL+E
Sbjct: 4 IKTPKAPVPVGPYSQAVEVNGFLFISGQIGINPETGKLV-EGFKEQVIQIFKNVDAILEE 62
Query: 65 AGLGMDSVVKTTILLKSLDDFAVVNGIYGSYFTE--PYPARATFQVAKLPKDALVEIEAI 122
AGL +++VK TI + + F +N IY YF + PAR T V +LP +A VEIE +
Sbjct: 63 AGLKRENIVKVTIYITDIKKFKELNEIYEDYFKDVSVKPARVTVGVKELPLNAEVEIEIV 122
Query: 123 AIK 125
A+K
Sbjct: 123 AVK 125
>gb|AAF24094.1| (AF118109) Brt1 [Schizophyllum commune]
Length = 128
Score = 92.0 bits (227), Expect = 1e-18
Identities = 49/123 (39%), Positives = 73/123 (58%), Gaps = 1/123 (0%)
Query: 2 KEVIHSTLAPKAI-GPYSQAIATNDLVFVSGQLGIDVSTGEFKGADIHSQTTQSMENIKA 60
KE + + AP + G YSQAI +V+ SG + +D TG+ D+ + T Q ++N+ A
Sbjct: 3 KEAVLTLNAPPPLPGIYSQAIKAGGMVYCSGAVPMDAKTGKLIDGDVKAHTHQCIKNLSA 62
Query: 61 ILKEAGLGMDSVVKTTILLKSLDDFAVVNGIYGSYFTEPYPARATFQVAKLPKDALVEIE 120
IL+EAG +++VVK + L ++DDFA VN +Y Y+ + P R V LP + VEIE
Sbjct: 63 ILEEAGTSLNNVVKVNVFLSNMDDFAAVNEVYKEYWGDVKPCRTCVAVKTLPLNTDVEIE 122
Query: 121 AIA 123
IA
Sbjct: 123 CIA 125
>ref|NP_240189.1| (NC_002528) hypothetical protein [Buchnera sp. APS]
sp|P57452|Y371_BUCAI Hypothetical protein BU371
dbj|BAB13075.1| (AP001119) hypothetical protein [Buchnera sp. APS]
Length = 128
Score = 90.1 bits (222), Expect = 4e-18
Identities = 49/128 (38%), Positives = 77/128 (59%), Gaps = 4/128 (3%)
Query: 1 MKEVIHSTLAPKAIGPYSQAIATNDLVFVSGQLGIDVSTGEFKGADIHSQTTQSMENIKA 60
M +I + APK IGPYSQA+ ++ + +SGQ+ IDV + + +I QT ++NIK
Sbjct: 1 MNHIIETKDAPKPIGPYSQALKIDNFIILSGQIPIDVISNQIP-ENIAEQTYLVLKNIKL 59
Query: 61 ILKEAGLGMDSVVKTTILLKSLDDFAVVNGIYGSYFTE---PYPARATFQVAKLPKDALV 117
IL A + +++KTT+ L ++N IY +F + +PAR+ +V KLPK+ +
Sbjct: 60 ILVHAKFQVHNIIKTTVFTTDLKKINIINEIYKKFFIDNKSNFPARSCVEVQKLPKNVKI 119
Query: 118 EIEAIAIK 125
EIEA+A K
Sbjct: 120 EIEAMAFK 127
>ref|NP_660701.1| (NC_004061) hypothetical protein [Buchnera aphidicola str. Sg
(Schizaphis graminum)]
gb|AAM67912.1| (AE014112) hypothetical protein [Buchnera aphidicola str. Sg
(Schizaphis graminum)]
Length = 128
Score = 88.6 bits (218), Expect = 1e-17
Identities = 45/128 (35%), Positives = 78/128 (60%), Gaps = 4/128 (3%)
Query: 1 MKEVIHSTLAPKAIGPYSQAIATNDLVFVSGQLGIDVSTGEFKGADIHSQTTQSMENIKA 60
M ++++ APK IGPYSQAI + + +SGQ+ IDV +G+ +I QT ++NIK+
Sbjct: 1 MNVIVNTENAPKPIGPYSQAIKNENFLIISGQIPIDVKSGKIPN-NISEQTYIVLKNIKS 59
Query: 61 ILKEAGLGMDSVVKTTILLKSLDDFAVVNGIYGSYFTE---PYPARATFQVAKLPKDALV 117
I+ + + ++K T+ +L+ ++N IY +F + +P R+ +V KLPK+ +
Sbjct: 60 IIIASKYTIQDIIKITVFTTNLEKIHIINEIYEKFFIDNKSSFPTRSCIEVQKLPKNVKI 119
Query: 118 EIEAIAIK 125
E+EA+A K
Sbjct: 120 EMEAMAFK 127
>ref|NP_541518.1| (NC_003318) PUTATIVE REGULATOR OF PURINE BIOSYNTHESIS [Brucella
melitensis]
gb|AAL53782.1| (AE009689) PUTATIVE REGULATOR OF PURINE BIOSYNTHESIS [Brucella
melitensis]
Length = 123
Score = 85.1 bits (209), Expect = 1e-16
Identities = 47/108 (43%), Positives = 68/108 (62%), Gaps = 2/108 (1%)
Query: 16 PYSQAIATNDLVFVSGQLGIDVSTGEFKGADIHSQTTQSMENIKAILKEAGLGMDSVVKT 75
P S A+ D+V+VSGQ+ + + G+ I +QT Q +ENIKA L AG M+ VVKT
Sbjct: 13 PLSPAVRVGDMVYVSGQVPVGPN-GQIVEGGIEAQTRQVLENIKAALALAGAAMEDVVKT 71
Query: 76 TILLKSLDDFAVVNGIYGSYFTEPYPARATFQVAKLPKDALVEIEAIA 123
T+ L+ DF +N +YG+YF + PAR T + ++L D +EIEA+A
Sbjct: 72 TVWLEDARDFGRMNAVYGTYFPKEPPARTTVE-SRLMIDIKIEIEAVA 118
>ref|NP_595001.1| (NC_003424) putative translation initiation inhibitor
[Schizosaccharomyces pombe]
pir||T50060 probable translation initiation inhibitor [imported] - fission
yeast (Schizosaccharomyces pombe)
emb|CAB63548.1| (AL133522) putative translation initiation inhibitor
[Schizosaccharomyces pombe]
emb|CAB63546.1| (AL133521) putative translation initiation inhibitor
[Schizosaccharomyces pombe]
Length = 126
Score = 83.2 bits (204), Expect = 5e-16
Identities = 44/112 (39%), Positives = 62/112 (55%), Gaps = 5/112 (4%)
Query: 15 GPYSQAIATNDLVFVSGQLGIDVSTGEFKGADIHSQTTQSMENIKAILKEAGLGMDSVVK 74
GPY+QA+ + L+F SGQ V G F I QT ++EN+ +L+ AG ++ +VK
Sbjct: 15 GPYNQAVKSGGLIFCSGQAA--VKDGNFVPGTIQEQTRLTIENLAEVLRVAGSSLEKLVK 72
Query: 75 TTILLKSLDDFAVVNGIYGSYFTEPYPARATFQVAKLP---KDALVEIEAIA 123
I L +DDFA +N +Y +P PAR T K+P K +EIE IA
Sbjct: 73 VNIFLTDIDDFAAMNEVYKEMLPDPMPARTTVAAGKIPLSSKGGKIEIECIA 124
>pir||S30349 perchloric acid-soluble protein, 23K - rat
emb|CAB36976.1| (X70825) perchloric acid soluble protein [Rattus norvegicus]
Length = 99
Score = 83.2 bits (204), Expect = 5e-16
Identities = 41/91 (45%), Positives = 60/91 (65%)
Query: 35 IDVSTGEFKGADIHSQTTQSMENIKAILKEAGLGMDSVVKTTILLKSLDDFAVVNGIYGS 94
+D S+G+ + + Q+++N+ ILK AG +VVKTT+LL ++DF VN IY +
Sbjct: 1 MDPSSGQLVPGGVAEEAKQALKNLGEILKAAGCDFTNVVKTTVLLADINDFGTVNEIYKT 60
Query: 95 YFTEPYPARATFQVAKLPKDALVEIEAIAIK 125
YF PARA +QVA LPK + +EIEAIA++
Sbjct: 61 YFQGNLPARAAYQVAALPKGSRIEIEAIAVQ 91
>gb|AAK73279.1| (AY039805) BRT1 [Coccidioides immitis]
Length = 128
Score = 82.8 bits (203), Expect = 6e-16
Identities = 43/123 (34%), Positives = 68/123 (54%), Gaps = 1/123 (0%)
Query: 2 KEVIHSTLAPKAIGPYSQAIATNDLVFVSGQLGIDVSTGEFKGADIHSQTTQSMENIKAI 61
K+V+ + AP + SQ I N +V+ SGQ+GID ++ + + +T Q N+ A+
Sbjct: 4 KQVVLTDKAPAPLPVLSQGIIHNGIVYCSGQVGIDPASKQMVEGTVQDRTAQIFRNLSAV 63
Query: 62 LKEAGLGMDSVVKTTILLKSLDDFAVVNGIYGSYFT-EPYPARATFQVAKLPKDALVEIE 120
L++AG ++ V+K + L ++DDF+ +N IY + EP P R V LP VEIE
Sbjct: 64 LEKAGSSLEKVIKVNVFLANMDDFSAMNEIYSQFLNQEPKPVRTCVAVKSLPLGTDVEIE 123
Query: 121 AIA 123
A
Sbjct: 124 CSA 126
>ref|NP_596433.1| (NC_003423) hypothetical protein [Schizosaccharomyces pombe]
sp|O43003|YB94_SCHPO Hypothetical protein C2G2.04c in chromosome II
pir||T40143 hypothetical protein SPBC2G2.04c - fission yeast
(Schizosaccharomyces pombe)
emb|CAA17884.1| (AL022103) hypothetical protein [Schizosaccharomyces pombe]
Length = 162
Score = 80.5 bits (197), Expect = 3e-15
Identities = 43/114 (37%), Positives = 66/114 (57%), Gaps = 5/114 (4%)
Query: 15 GPYSQAIATNDLVFVSGQLGIDVSTGEFKGADIHSQTTQSMENIKAILKEAGLGMDSVVK 74
GPY+QAI N +++ SGQ I V+ G+ + QT Q + N++ +L EAG ++ +VK
Sbjct: 51 GPYNQAIKANGVIYCSGQ--IPVANGKVIEGTVGDQTRQCLLNLQEVLTEAGSSLNKIVK 108
Query: 75 TTILLKSLDDFAVVNGIYGSYFTEPYPARATFQVAKLP---KDALVEIEAIAIK 125
I L +DDFA VN +Y +P PAR+ V +P + +EIE IA++
Sbjct: 109 VNIFLADMDDFAAVNKVYTEVLPDPKPARSCVAVKTVPLSTQGVKIEIECIALE 162
>ref|NP_436478.1| (NC_003037) hypothetical protein [Sinorhizobium meliloti]
gb|AAK65890.1| (AE007308) hypothetical protein [Sinorhizobium meliloti]
Length = 130
Score = 80.5 bits (197), Expect = 3e-15
Identities = 52/119 (43%), Positives = 70/119 (58%), Gaps = 7/119 (5%)
Query: 11 PKAIGPY--SQAIATNDLVFVSGQLGIDVSTGEFKG-ADIHSQTTQSMENIKAILKEAGL 67
P P+ SQAI N VFVSGQ I GE G D Q Q+ N+ LK AG
Sbjct: 10 PDPYAPFLLSQAIKANGFVFVSGQAAIG-DNGEIVGEGDFDRQAGQAFGNLDRALKAAGS 68
Query: 68 GMDSVVKTTILLKSLDDFAVVNGIYGSYFTEPYPARATFQVAKL--PKDALVEIEAIAI 124
G+D VVK TI L+S+++FA + + +F+ PYPA + +V+ L PK A++EIEAIA+
Sbjct: 69 GLDKVVKVTIFLRSMENFAKIVELRRKWFSAPYPADSIIEVSSLYSPK-AMIEIEAIAL 126
>ref|NP_012213.1| (NC_001141) Maintenance of Mitochondrial Function; Mmf1p
[Saccharomyces cerevisiae]
sp|P40185|MMF1_YEAST MMF1 protein, mitochondrial precursor (Maintenance of mitochondrial
function 1) (Isoleucine biosynthesis and maintenance of
intact mitochondria 1)
pir||S48428 hypothetical protein YIL051c - yeast (Saccharomyces cerevisiae)
emb|CAA86171.1| (Z38060) orf, len: 145, CAI: 0.33, similar to B44514 B44514
HYPOTHETICAL PROTEIN 1 (VNFA 5' REGION) [Saccharomyces
cerevisiae]
dbj|BAB20814.1| (AB050474) IBM1 [Saccharomyces cerevisiae]
Length = 145
Score = 79.3 bits (194), Expect = 7e-15
Identities = 42/121 (34%), Positives = 68/121 (55%), Gaps = 1/121 (0%)
Query: 5 IHSTLAPKAIGPYSQAIATNDLVFVSGQLGIDVSTGEFKGADIHSQTTQSMENIKAILKE 64
+ + LAP A YSQA+ N+ V+VSGQ+ +G+ I + Q +N+K IL E
Sbjct: 24 VSTKLAPPAAASYSQAMKANNFVYVSGQIPYTPDNKPVQGS-ISEKAEQVFQNVKNILAE 82
Query: 65 AGLGMDSVVKTTILLKSLDDFAVVNGIYGSYFTEPYPARATFQVAKLPKDALVEIEAIAI 124
+ +D++VK + L + +FA N +Y +F PAR+ VA LP + +E+E IA+
Sbjct: 83 SNSSLDNIVKVNVFLADMKNFAEFNSVYAKHFHTHKPARSCVGVASLPLNVDLEMEVIAV 142
Query: 125 K 125
+
Sbjct: 143 E 143
>ref|NP_010978.1| (NC_001137) Homologous Mmf1p factor; Hmf1p [Saccharomyces
cerevisiae]
sp|P40037|HMF1_YEAST HMF1 protein
pir||S50560 hypothetical protein YER057c - yeast (Saccharomyces cerevisiae)
pdb|1JD1|B Chain B, Crystal Structure Of Yeo7_yeast
pdb|1JD1|C Chain C, Crystal Structure Of Yeo7_yeast
pdb|1JD1|A Chain A, Crystal Structure Of Yeo7_yeast
pdb|1JD1|F Chain F, Crystal Structure Of Yeo7_yeast
pdb|1JD1|D Chain D, Crystal Structure Of Yeo7_yeast
pdb|1JD1|E Chain E, Crystal Structure Of Yeo7_yeast
gb|AAB64593.1| (U18813) Yer057cp [Saccharomyces cerevisiae]
dbj|BAB20815.1| (AB050475) highdosage growth inhibitor [Saccharomyces cerevisiae]
Length = 129
Score = 77.4 bits (189), Expect = 3e-14
Identities = 43/114 (37%), Positives = 64/114 (55%), Gaps = 1/114 (0%)
Query: 10 APKAIGPYSQAIATNDLVFVSGQLGIDVSTGEFKGADIHSQTTQSMENIKAILKEAGLGM 69
AP A YS A+ N+L+F+SGQ+ + +G+ I + Q ++NIK +L+ + +
Sbjct: 13 APAAAASYSHAMKVNNLIFLSGQIPVTPDNKLVEGS-IADKAEQVIQNIKNVLEASNSSL 71
Query: 70 DSVVKTTILLKSLDDFAVVNGIYGSYFTEPYPARATFQVAKLPKDALVEIEAIA 123
D VVK I L ++ FA N +Y YF PAR+ VA LP +E+EAIA
Sbjct: 72 DRVVKVNIFLADINHFAEFNSVYAKYFNTHKPARSCVAVAALPLGVDMEMEAIA 125
>ref|NP_631776.1| (NC_003888) conserved hypothetical protein [Streptomyces coelicolor
A3(2)]
emb|CAC22746.1| (AL512944) conserved hypothetical protein [Streptomyces coelicolor
A3(2)]
Length = 127
Score = 75.5 bits (184), Expect = 1e-13
Identities = 43/123 (34%), Positives = 64/123 (51%), Gaps = 1/123 (0%)
Query: 2 KEVIHSTLAPKAIGPYSQAIATNDLVFVSGQLGIDVSTGEFKGADIHSQTTQSMENIKAI 61
+ VI + AP P SQ I ++ +SGQL D TG G + QT Q + N+ A+
Sbjct: 3 RSVITTDNAPSLPAPLSQGIRKGPVLQISGQLPFDPYTGAVVGTTVAEQTAQVLRNVTAV 62
Query: 62 LKEAGLGMDSVVKTTILLKSLDDFAVVNGIYGSYFTEPYPARATFQVAKLPKDALVEIEA 121
L+ G G++ VV + L +N Y + EP+PAR T + +LP LVEI+A
Sbjct: 63 LEAGGAGLEDVVMLRVYLTDPAHLPELNDAYATAVGEPFPARTTVYM-QLPPGLLVEIDA 121
Query: 122 IAI 124
+A+
Sbjct: 122 LAV 124
>ref|NP_437258.1| (NC_003078) putative protein, similar to translation initiation
inhibitors [Sinorhizobium meliloti]
emb|CAC49118.1| (AL603644) putative protein, similar to translation initiation
inhibitors [Sinorhizobium meliloti]
Length = 127
Score = 75.1 bits (183), Expect = 1e-13
Identities = 40/110 (36%), Positives = 67/110 (60%), Gaps = 3/110 (2%)
Query: 16 PYSQAIATNDLVFVSGQLGIDVSTGEFKGADIHSQTTQSMENIKAILKEAGLGMDSVVKT 75
P+++A+ N ++VSGQ+ ++ GE G I +++ +++EN+ AIL EAG G++ VV+
Sbjct: 19 PFARAVEANGWLYVSGQVAMEA--GEIVGGGIVAESRKAIENMIAILHEAGYGLEDVVRV 76
Query: 76 TILLKSLDDFAVVNGIYGSYFTEPYPARATFQVAKLPKDALVEIEAIAIK 125
+ L DF NG+Y YF PARA Q +++ D VE++ +A K
Sbjct: 77 GVWLDDPRDFWTFNGVYAQYFGANPPARACVQ-SRMMVDCKVEVDCVAYK 125
>ref|NP_522881.1| (NC_003296) CONSERVED HYPOTHETICAL PROTEIN [Ralstonia solanacearum]
ref|NP_522912.1| (NC_003296) CONSERVED HYPOTHETICAL PROTEIN [Ralstonia solanacearum]
emb|CAD18473.1| (AL646084) CONSERVED HYPOTHETICAL PROTEIN [Ralstonia solanacearum]
emb|CAD18504.1| (AL646084) CONSERVED HYPOTHETICAL PROTEIN [Ralstonia solanacearum]
Length = 125
Score = 74.7 bits (182), Expect = 2e-13
Identities = 46/110 (41%), Positives = 61/110 (54%), Gaps = 2/110 (1%)
Query: 16 PYSQAIATNDLVFVSGQLGIDVSTGEFKGADIHSQTTQSMENIKAILKEAGLGMDSVVKT 75
P S A DLVFVSGQ+ G G I + T Q++EN+ +L AG + VVKT
Sbjct: 17 PRSLATKAGDLVFVSGQVARGEDGGIISGG-IEAHTRQTLENVAYVLALAGCTLADVVKT 75
Query: 76 TILLKSLDDFAVVNGIYGSYFTEPYPARATFQVAKLPKDALVEIEAIAIK 125
T+ L+ DF N +YG +F + P+R+T Q AK +EIEAIA K
Sbjct: 76 TVWLEDARDFEAFNRVYGEFFRDNKPSRSTLQ-AKNMVGTKIEIEAIAYK 124
>ref|NP_105319.1| (NC_002678) translation initiation inhibitor [Mesorhizobium loti]
dbj|BAB51105.1| (AP003004) translation initiation inhibitor [Mesorhizobium loti]
Length = 132
Score = 73.2 bits (178), Expect = 5e-13
Identities = 43/110 (39%), Positives = 61/110 (55%), Gaps = 2/110 (1%)
Query: 16 PYSQAIATNDLVFVSGQLGIDVSTGEFKGADIHSQTTQSMENIKAILKEAGLGMDSVVKT 75
P S A+ D V+VSGQ+ + KG I QT Q + N+KA L AG +D VVKT
Sbjct: 23 PLSPAVRAGDFVYVSGQVPVGSDGIVVKGG-ITEQTEQVLANVKAALALAGCTLDDVVKT 81
Query: 76 TILLKSLDDFAVVNGIYGSYFTEPYPARATFQVAKLPKDALVEIEAIAIK 125
T+ L DF N +Y +F + PAR T + ++L D +E+EA+A +
Sbjct: 82 TVWLGDARDFGAFNAVYARHFPKNPPARTTVE-SRLMIDIKIEVEAVAYR 130
>ref|NP_268529.1| (NC_002737) conserved hypothetical protein [Streptococcus pyogenes]
[Streptococcus pyogenes M1 GAS]
ref|NP_606451.1| (NC_003485) conserved hypothetical protein [Streptococcus pyogenes
MGAS8232]
gb|AAK33250.1| (AE006484) conserved hypothetical protein [Streptococcus pyogenes
M1 GAS]
gb|AAL96950.1| (AE009964) conserved hypothetical protein [Streptococcus pyogenes
MGAS8232]
Length = 121
Score = 72.4 bits (176), Expect = 8e-13
Identities = 36/113 (31%), Positives = 61/113 (53%), Gaps = 1/113 (0%)
Query: 11 PKAIGPYSQAIATNDLVFVSGQLGIDVSTGEFKGADIHSQTTQSMENIKAILKEAGLGMD 70
P+ +GPYS ++ +GQL ++ TG+ +Q Q N+++IL E L ++
Sbjct: 5 PEPMGPYSTYTIEGHFLYTAGQLPLNPVTGQLSDG-FEAQCRQVFVNLQSILAEQKLDLN 63
Query: 71 SVVKTTILLKSLDDFAVVNGIYGSYFTEPYPARATFQVAKLPKDALVEIEAIA 123
+ K + L + + ++N + F EPYP R QV+ LP AL+E+EA+A
Sbjct: 64 HIYKLNVYLTDVTNVEILNHVMTDLFEEPYPVRTAVQVSALPLQALIEVEAVA 116
>ref|NP_522807.1| (NC_003296) PROBABLE LIPOPROTEIN [Ralstonia solanacearum]
emb|CAD18397.1| (AL646083) PROBABLE LIPOPROTEIN [Ralstonia solanacearum]
Length = 158
Score = 72.4 bits (176), Expect = 8e-13
Identities = 45/109 (41%), Positives = 59/109 (53%), Gaps = 2/109 (1%)
Query: 16 PYSQAIATNDLVFVSGQLGIDVSTGEFKGADIHSQTTQSMENIKAILKEAGLGMDSVVKT 75
P + A+ +L+FVSG D G+ D +Q Q MENI ILK AG+G D VVK
Sbjct: 48 PLTPAVKVGNLLFVSGIPAFD-KHGKLAVNDFTAQMNQVMENITGILKAAGIGWDRVVKV 106
Query: 76 TILLKSLDDFAVVNGIYGSYF-TEPYPARATFQVAKLPKDALVEIEAIA 123
+ L +DF +N IY ++F YPAR T A D L+EIE +A
Sbjct: 107 NVFLARREDFKEMNRIYAAHFQAGRYPARTTAVTALPNPDFLLEIECVA 155
>ref|XP_088956.1| (XM_088956) similar to 14.5 kDa translational inhibitor protein
(p14.5) (UK114 antigen homolog) [Homo sapiens]
Length = 216
Score = 72.0 bits (175), Expect = 1e-12
Identities = 44/120 (36%), Positives = 56/120 (46%), Gaps = 28/120 (23%)
Query: 3 EVIHSTLAPKAIGPYSQAIATNDLVFVSGQLGIDVSTGEFKGADIHSQTTQSMENIKAIL 62
+ I +T AP AIGPYSQA+ L +N+ IL
Sbjct: 116 KAISTTKAPAAIGPYSQAVLQKKL----------------------------SKNMSKIL 147
Query: 63 KEAGLGMDSVVKTTILLKSLDDFAVVNGIYGSYFTEPYPARATFQVAKLPKDALVEIEAI 122
K AG + VKTT+LL ++DF VN IY YF +PA A + VA LPK EIE +
Sbjct: 148 KAAGCDFTNAVKTTVLLADINDFPTVNEIYKQYFKSSFPASAAYLVAALPKGGQAEIEEV 207
>ref|NP_103845.1| (NC_002678) probable translation initiation inhibitor
[Mesorhizobium loti]
dbj|BAB49631.1| (AP002999) probable translation initiation inhibitor [Mesorhizobium
loti]
Length = 130
Score = 71.6 bits (174), Expect = 1e-12
Identities = 44/123 (35%), Positives = 65/123 (52%), Gaps = 1/123 (0%)
Query: 3 EVIHSTLAPKAIG-PYSQAIATNDLVFVSGQLGIDVSTGEFKGADIHSQTTQSMENIKAI 61
EV + A +A+G P S LVFVSG +D+ TG+ DI QT S++ +K
Sbjct: 7 EVPVLSAAVRALGVPLSLVTRAAGLVFVSGMPPLDLLTGKLVKGDIEVQTEASLKALKHC 66
Query: 62 LKEAGLGMDSVVKTTILLKSLDDFAVVNGIYGSYFTEPYPARATFQVAKLPKDALVEIEA 121
L+ AG +D+VV I + +A +N +Y YF E P+R VA P + +EIE
Sbjct: 67 LEAAGTSLDNVVMVRIYAVNSGFYAAINRVYARYFPENAPSRTFVPVASWPMEFDIEIEC 126
Query: 122 IAI 124
+A+
Sbjct: 127 VAV 129
>ref|NP_103846.1| (NC_002678) probable translation initiation inhibitor
[Mesorhizobium loti]
dbj|BAB49632.1| (AP002999) probable translation initiation inhibitor [Mesorhizobium
loti]
Length = 130
Score = 70.1 bits (170), Expect = 4e-12
Identities = 37/109 (33%), Positives = 59/109 (53%)
Query: 16 PYSQAIATNDLVFVSGQLGIDVSTGEFKGADIHSQTTQSMENIKAILKEAGLGMDSVVKT 75
P S A+ N VF+S +D+ TGE DI +QT S++ +K L+ AG +D+VV
Sbjct: 21 PCSTAVKANGFVFISATPPVDMVTGEMVRGDIETQTEASLKALKHCLEAAGTSLDNVVMV 80
Query: 76 TILLKSLDDFAVVNGIYGSYFTEPYPARATFQVAKLPKDALVEIEAIAI 124
I + + +N +Y +F+ PAR+ VA P + +EIE +A+
Sbjct: 81 RIYAVNSGFYNAINRVYARFFSTNPPARSFVPVASWPMEFDIEIECVAV 129
>ref|NP_437363.1| (NC_003078) putative translation initiation inhibitor protein
[Sinorhizobium meliloti]
emb|CAC49223.1| (AL603645) putative translation initiation inhibitor protein
[Sinorhizobium meliloti]
Length = 129
Score = 68.9 bits (167), Expect = 9e-12
Identities = 42/110 (38%), Positives = 64/110 (58%), Gaps = 3/110 (2%)
Query: 16 PYSQAIATNDLVFVSGQLGIDVSTGEFKGADIHSQTTQSMENIKAILKEAGLGMDSVVKT 75
P+++A+ + VSGQ+ ++ GE G +I +QT +++ N+ AILKEAG G++ VV+
Sbjct: 19 PFARAVEAGGWLHVSGQVAME--NGEIIGGNIVAQTHKAIGNLLAILKEAGYGVEHVVRV 76
Query: 76 TILLKSLDDFAVVNGIYGSYFTEPYPARATFQVAKLPKDALVEIEAIAIK 125
+ L DF N IY YF PARA Q + + D VEI+ +A K
Sbjct: 77 GVWLDDPRDFWSFNRIYQDYFGAHPPARACVQ-SSMMVDCKVEIDCVAYK 125
>ref|NP_533169.1| (NC_003304) conserved hypothetical protein [Agrobacterium
tumefaciens str. C58 (U. Washington)]
gb|AAL43485.1| (AE009196) conserved hypothetical protein [Agrobacterium
tumefaciens str. C58 (U. Washington)]
Length = 128
Score = 68.2 bits (165), Expect = 2e-11
Identities = 39/122 (31%), Positives = 58/122 (46%)
Query: 2 KEVIHSTLAPKAIGPYSQAIATNDLVFVSGQLGIDVSTGEFKGADIHSQTTQSMENIKAI 61
K++I K I P+S + +V+VSG L D D +QT +E IK++
Sbjct: 3 KKIIVPVGTSKPIAPFSPGTLADGVVYVSGTLPFDKDNNVVHVGDASAQTRHVLETIKSV 62
Query: 62 LKEAGLGMDSVVKTTILLKSLDDFAVVNGIYGSYFTEPYPARATFQVAKLPKDALVEIEA 121
++ AG M+ V I + ++ VN +Y YF PAR Q + DALVEI
Sbjct: 63 IETAGGTMEDVTMNHIFITDWANYQAVNTVYAEYFPGDKPARYCIQCGLVKPDALVEIAT 122
Query: 122 IA 123
+A
Sbjct: 123 VA 124
>ref|NP_355445.1| (NC_003062) AGR_C_4539p [Agrobacterium tumefaciens] [Agrobacterium
tumefaciens str. C58 (Cereon)]
gb|AAK88230.1| (AE008162) AGR_C_4539p [Agrobacterium tumefaciens str. C58
(Cereon)]
Length = 138
Score = 68.2 bits (165), Expect = 2e-11
Identities = 39/122 (31%), Positives = 58/122 (46%)
Query: 2 KEVIHSTLAPKAIGPYSQAIATNDLVFVSGQLGIDVSTGEFKGADIHSQTTQSMENIKAI 61
K++I K I P+S + +V+VSG L D D +QT +E IK++
Sbjct: 13 KKIIVPVGTSKPIAPFSPGTLADGVVYVSGTLPFDKDNNVVHVGDASAQTRHVLETIKSV 72
Query: 62 LKEAGLGMDSVVKTTILLKSLDDFAVVNGIYGSYFTEPYPARATFQVAKLPKDALVEIEA 121
++ AG M+ V I + ++ VN +Y YF PAR Q + DALVEI
Sbjct: 73 IETAGGTMEDVTMNHIFITDWANYQAVNTVYAEYFPGDKPARYCIQCGLVKPDALVEIAT 132
Query: 122 IA 123
+A
Sbjct: 133 VA 134
>ref|NP_631614.1| (NC_003888) conserved hypothetical protein [Streptomyces coelicolor
A3(2)]
emb|CAC16451.1| (AL450165) conserved hypothetical protein [Streptomyces coelicolor
A3(2)]
Length = 137
Score = 67.8 bits (164), Expect = 2e-11
Identities = 45/125 (36%), Positives = 64/125 (51%), Gaps = 6/125 (4%)
Query: 2 KEVIHSTLAPKAIGPYSQAIATNDLVFVSGQLGIDVSTGEF-KGADIHSQTTQSMENIKA 60
K+ +H+ AP+ G YSQ + +F +G D TG KG + +QT Q + N+ A
Sbjct: 7 KQAVHTDGAPRPAGAYSQGVVAGGFLFTAGFGPQDPVTGAVPKG--VGAQTAQVLRNVGA 64
Query: 61 ILKEAGLGMDSVVKTTILLKSL-DDFAVVNGIYGSYFTEPYPARATFQVAKLPKDALVEI 119
+L GL VVK T L+ L DFA + Y +F EP+P R T V D LVEI
Sbjct: 65 VLAARGLSPRDVVKVTAHLQHLRRDFAAYDAAYREFFEEPHPVRTT--VGSDLMDILVEI 122
Query: 120 EAIAI 124
+ + +
Sbjct: 123 DVVVL 127
>ref|NP_534418.1| (NC_003305) translation initiation inhibitor [Agrobacterium
tumefaciens str. C58 (U. Washington)]
gb|AAL44734.1| (AE009323) translation initiation inhibitor [Agrobacterium
tumefaciens str. C58 (U. Washington)]
Length = 135
Score = 67.8 bits (164), Expect = 2e-11
Identities = 41/110 (37%), Positives = 61/110 (55%), Gaps = 3/110 (2%)
Query: 16 PYSQAIATNDLVFVSGQLGIDVSTGEFKGADIHSQTTQSMENIKAILKEAGLGMDSVVKT 75
P+++A+ D V+VSGQ + GE I +QT Q + NI+ +L AG + VVK
Sbjct: 26 PFAKAVRAGDFVYVSGQ--VPTVDGEVVTGGIVAQTEQVVANIRDVLALAGCTLADVVKV 83
Query: 76 TILLKSLDDFAVVNGIYGSYFTEPYPARATFQVAKLPKDALVEIEAIAIK 125
+ L DF+ N ++ YF + PAR+T Q + L DA VE++ IA K
Sbjct: 84 NVWLDDARDFSSFNAVFQKYFIDHPPARSTVQ-SPLMVDAKVEMDVIAYK 132
>ref|NP_356709.1| (NC_003063) AGR_L_1839p [Agrobacterium tumefaciens] [Agrobacterium
tumefaciens str. C58 (Cereon)]
gb|AAK89494.1| (AE008291) AGR_L_1839p [Agrobacterium tumefaciens str. C58
(Cereon)]
Length = 178
Score = 67.8 bits (164), Expect = 2e-11
Identities = 41/110 (37%), Positives = 61/110 (55%), Gaps = 3/110 (2%)
Query: 16 PYSQAIATNDLVFVSGQLGIDVSTGEFKGADIHSQTTQSMENIKAILKEAGLGMDSVVKT 75
P+++A+ D V+VSGQ + GE I +QT Q + NI+ +L AG + VVK
Sbjct: 69 PFAKAVRAGDFVYVSGQ--VPTVDGEVVTGGIVAQTEQVVANIRDVLALAGCTLADVVKV 126
Query: 76 TILLKSLDDFAVVNGIYGSYFTEPYPARATFQVAKLPKDALVEIEAIAIK 125
+ L DF+ N ++ YF + PAR+T Q + L DA VE++ IA K
Sbjct: 127 NVWLDDARDFSSFNAVFQKYFIDHPPARSTVQ-SPLMVDAKVEMDVIAYK 175
>ref|NP_629142.1| (NC_003888) conserved hypothetical protein [Streptomyces coelicolor
A3(2)]
emb|CAC40603.1| (AL591857) conserved hypothetical protein [Streptomyces coelicolor
A3(2)]
Length = 136
Score = 66.2 bits (160), Expect = 6e-11
Identities = 40/117 (34%), Positives = 63/117 (53%), Gaps = 10/117 (8%)
Query: 17 YSQAIATNDLVFVSGQLGI----DVSTGEFKGADIHSQTTQSMENIKAILKEAGLGMDSV 72
+S + +++ V+GQ+G + G + QT Q++ N+KAIL+E G D V
Sbjct: 19 FSHGVKKGNILQVAGQVGFLPHEEGKAPTPAGPTLREQTLQTLANVKAILEEGGASWDDV 78
Query: 73 VKTTILLKSLDDFAVVNGIYGSYF-----TEPYPARATFQVAKLPKDALVEIEAIAI 124
+ + L +D FA +N IY +YF T+P AR T V LP L+EI+A+A+
Sbjct: 79 MMLRVYLTDVDHFAEMNEIYNAYFAEQGLTQPPAARTTVYVG-LPAGLLIEIDALAV 134
>ref|NP_421592.1| (NC_002696) conserved hypothetical protein [Caulobacter crescentus
CB15]
gb|AAK24760.1| (AE005945) conserved hypothetical protein [Caulobacter crescentus
CB15]
Length = 129
Score = 62.0 bits (149), Expect = 1e-09
Identities = 38/122 (31%), Positives = 56/122 (45%)
Query: 2 KEVIHSTLAPKAIGPYSQAIATNDLVFVSGQLGIDVSTGEFKGADIHSQTTQSMENIKAI 61
K VI I P+S + +V+VSG L D D +QT Q +E IK++
Sbjct: 3 KTVITPPGTQTPIAPFSPGTLADGIVYVSGTLAFDKDNNVAFPGDAEAQTRQVLETIKSV 62
Query: 62 LKEAGLGMDSVVKTTILLKSLDDFAVVNGIYGSYFTEPYPARATFQVAKLPKDALVEIEA 121
++ AG M+ V I L +A +N +Y YF PAR Q + +VEI +
Sbjct: 63 IETAGGTMEDVTMNHIFLTDWVHYAPMNKVYAEYFPGDKPARYCIQCGLVKPGFVVEIAS 122
Query: 122 IA 123
+A
Sbjct: 123 VA 124
>ref|NP_656570.1| (NC_003995) UPF0076, YjgF family [Bacillus anthracis A2012]
[Bacillus anthracis str. A2012]
Length = 131
Score = 61.2 bits (147), Expect = 2e-09
Identities = 45/129 (34%), Positives = 67/129 (51%), Gaps = 8/129 (6%)
Query: 2 KEVIHSTLAPKAIGPYSQAIATNDL---VFVSGQLGIDVSTGEFKGA-DIHSQTTQSMEN 57
K+ I+ P G YS + ++ +++SGQ+ I+ G+ G D+ +QT Q EN
Sbjct: 3 KKFINPKTMPPTFG-YSHVVEASNAKRTIYISGQVAINTD-GQIVGINDLATQTRQVFEN 60
Query: 58 IKAILKEAGLGMDSVVKTTILLKSLDDFAVVNGIYGSYF-TEPYPARATFQVAKLPKD-A 115
IK L+ + L + VVK T L + A+V I Y T PA + +V KL D
Sbjct: 61 IKIALETSDLNFNDVVKLTFFLTDISQMAIVRDIRDQYIDTNNPPASSAVEVRKLINDNL 120
Query: 116 LVEIEAIAI 124
L+EIEAIA+
Sbjct: 121 LIEIEAIAV 129
>ref|NP_415530.1| (NC_000913) orf, hypothetical protein [Escherichia coli K12]
sp|P75896|YCDK_ECOLI Hypothetical protein ycdK
pir||H64842 probable translation initiation regulator b1010 - Escherichia coli
gb|AAC74095.1| (AE000202) orf, hypothetical protein [Escherichia coli K12]
dbj|BAA35777.1| (D90737) Hypothetical protein 1 (vnfA 5' region) [Escherichia coli]
dbj|BAA35787.1| (D90738) Hypothetical protein 1 (vnfA 5' region) [Escherichia coli]
Length = 128
Score = 60.8 bits (146), Expect = 3e-09
Identities = 37/122 (30%), Positives = 56/122 (45%)
Query: 2 KEVIHSTLAPKAIGPYSQAIATNDLVFVSGQLGIDVSTGEFKGADIHSQTTQSMENIKAI 61
K VI + + P+ + +V+VSG L D D +QT +E I+ +
Sbjct: 3 KSVIIPAGSSAPLAPFVPGTLADGVVYVSGTLAFDQHNNVLFADDPKAQTRHVLETIRKV 62
Query: 62 LKEAGLGMDSVVKTTILLKSLDDFAVVNGIYGSYFTEPYPARATFQVAKLPKDALVEIEA 121
++ AG M V +I + ++A +N IY +F PAR Q + DALVEI
Sbjct: 63 IETAGGTMADVTFNSIFITDWKNYAAINEIYAEFFPGDKPARFCIQCGLVKPDALVEIAT 122
Query: 122 IA 123
IA
Sbjct: 123 IA 124
>dbj|BAB97545.1| (AP005274) Putative translation initiation inhibitor
[Corynebacterium glutamicum ATCC 13032]
Length = 135
Score = 60.5 bits (145), Expect = 3e-09
Identities = 37/109 (33%), Positives = 55/109 (49%), Gaps = 2/109 (1%)
Query: 17 YSQAIATNDLVFVSGQLGIDVSTGEFKGADIHSQTTQSMENIKAILKEAGLGMDSVVKTT 76
YS + D + +SG + D DI +Q Q +N++A+++EAG ++++V TT
Sbjct: 19 YSYGVRAGDQLHISGMVAFDSDANIVGEGDIEAQAEQVFKNLQAVVEEAGGTINNIVSTT 78
Query: 77 ILLKSLDDFAVVNGIYGSYFT-EPYPARATFQVAKLPK-DALVEIEAIA 123
L + D VVN YFT E P VA L + LVEI A+A
Sbjct: 79 TYLADVTDAPVVNAARSRYFTGEVLPTHTVIGVAALARPQFLVEISAVA 127
>ref|NP_599404.1| (NC_003450) COG0251:Putative translation initiation inhibitor
[Corynebacterium glutamicum]
Length = 131
Score = 60.5 bits (145), Expect = 3e-09
Identities = 37/109 (33%), Positives = 55/109 (49%), Gaps = 2/109 (1%)
Query: 17 YSQAIATNDLVFVSGQLGIDVSTGEFKGADIHSQTTQSMENIKAILKEAGLGMDSVVKTT 76
YS + D + +SG + D DI +Q Q +N++A+++EAG ++++V TT
Sbjct: 15 YSYGVRAGDQLHISGMVAFDSDANIVGEGDIEAQAEQVFKNLQAVVEEAGGTINNIVSTT 74
Query: 77 ILLKSLDDFAVVNGIYGSYFT-EPYPARATFQVAKLPK-DALVEIEAIA 123
L + D VVN YFT E P VA L + LVEI A+A
Sbjct: 75 TYLADVTDAPVVNAARSRYFTGEVLPTHTVIGVAALARPQFLVEISAVA 123
>ref|NP_436903.1| (NC_003078) putative translation initiation inhibitor protein
[Sinorhizobium meliloti]
emb|CAC48763.1| (AL603643) putative translation initiation inhibitor protein
[Sinorhizobium meliloti]
Length = 127
Score = 60.5 bits (145), Expect = 3e-09
Identities = 43/125 (34%), Positives = 66/125 (52%), Gaps = 3/125 (2%)
Query: 1 MKEVIHSTLAPKAIGPYSQAIATNDLVFVSGQLGIDVSTGEFKGADIHSQTTQSMENIKA 60
M EVI + P + P S+A+ L F S + D TGE DI +Q ++++N++
Sbjct: 1 MFEVIDTGADPSDV-PVSEAVHAGGL-FWSVHVSEDPVTGEPVFGDIETQARRTLQNLEI 58
Query: 61 ILKEAGLGMDSVVKTTILLKSLDDFAVVNGIYGSYFTEPYPARATFQVAKLPKDAL-VEI 119
+K AG + +VV+ + L D +N IY +F EPYP RAT V +L L +E+
Sbjct: 59 AIKAAGGSLANVVQMQVFLTERADAPGMNRIYTEFFREPYPVRATVVVKELITPGLRIEV 118
Query: 120 EAIAI 124
A A+
Sbjct: 119 LAHAV 123
>ref|NP_522749.1| (NC_003296) CONSERVED HYPOTHETICAL PROTEIN [Ralstonia solanacearum]
emb|CAD18339.1| (AL646083) CONSERVED HYPOTHETICAL PROTEIN [Ralstonia solanacearum]
Length = 128
Score = 60.1 bits (144), Expect = 4e-09
Identities = 38/110 (34%), Positives = 60/110 (54%), Gaps = 3/110 (2%)
Query: 16 PYSQAIATNDLVFVSGQLGIDVSTGEFKGADIHSQTTQSMENIKAILKEAGLGMDSVVKT 75
P+++A + +FVSGQ + GE G I QT Q+++N+ AIL EAG G + VV+
Sbjct: 20 PFARAAGADGWLFVSGQT--PMVGGEVVGHGIVEQTHQTLKNLLAILAEAGYGPEHVVRC 77
Query: 76 TILLKSLDDFAVVNGIYGSYFTEPYPARATFQVAKLPKDALVEIEAIAIK 125
+ L DF N ++ YF PAR+ V+ + D VE++ +A +
Sbjct: 78 GVWLDDPRDFPSFNRVFKEYFGANPPARSCV-VSSMVIDCKVEVDCVAYR 126
>gb|AAF03490.1| (U93363) YjgF-like protein [Pseudomonas pseudoalcaligenes]
Length = 142
Score = 60.1 bits (144), Expect = 4e-09
Identities = 36/117 (30%), Positives = 56/117 (47%), Gaps = 1/117 (0%)
Query: 5 IHSTLAPKAIGPYSQAIATNDLVFVSGQLGIDVSTGEFKGADIHSQTTQSMENIKAILKE 64
I S P Y+ + VFVSG + +D G + +QT Q + N + + E
Sbjct: 16 IRSQSLPAPHFSYTPVVRAGGCVFVSGLVALDPVLGTLINGGMEAQTRQILNNFERLSAE 75
Query: 65 AGLGMDSVVKTTILLKSLDDFAVVNGIYGSYFTEPY-PARATFQVAKLPKDALVEIE 120
LG+D ++ I F+ +N ++ +F+E PAR + V+ LP ALVEIE
Sbjct: 76 LELGLDQLMLARIYCADFAQFSAINQVWEEFFSERIPPARTSVGVSALPLGALVEIE 132
>gb|AAK26518.1|AF319593_2 (AF319593) putative ferredoxin [Pseudomonas putida]
Length = 142
Score = 59.3 bits (142), Expect = 7e-09
Identities = 36/117 (30%), Positives = 56/117 (47%), Gaps = 1/117 (0%)
Query: 5 IHSTLAPKAIGPYSQAIATNDLVFVSGQLGIDVSTGEFKGADIHSQTTQSMENIKAILKE 64
I S P Y+ + VFVSG + +D G + +QT Q + N + + E
Sbjct: 16 IRSQSLPAPHFSYTPVVRAGGCVFVSGLVALDPVLGTLIDEGMEAQTRQILNNFERLSAE 75
Query: 65 AGLGMDSVVKTTILLKSLDDFAVVNGIYGSYFTEPY-PARATFQVAKLPKDALVEIE 120
LG+D ++ I F+ +N ++ +F+E PAR + V+ LP ALVEIE
Sbjct: 76 LELGLDQLMLARIYCADFAQFSAINQVWEEFFSERIPPARTSVGVSALPLGALVEIE 132
>gb|AAK26524.1|AF319593_8 (AF319593) 2-aminomuconate deaminase [Pseudomonas putida]
Length = 143
Score = 59.3 bits (142), Expect = 7e-09
Identities = 40/123 (32%), Positives = 63/123 (50%), Gaps = 12/123 (9%)
Query: 14 IGPYSQAIATNDLVFVSGQ---------LGIDV-STGEFKGADIHSQTTQSMENIKAILK 63
+G + D ++VSG G ++ STG + DI QT + ++NI+ IL+
Sbjct: 19 LGSFPHVKRAGDFLYVSGTSSRRPDNTIAGAELDSTGRVR-PDIEVQTREVLKNIRDILR 77
Query: 64 EAGLGMDSVVKTTILLKSLDDFAVVNGIYGSYFTEPYPARATFQVAKLPKDALV-EIEAI 122
G +D VV+ L +++DF+ N +Y +F P R T V +LP LV EI+A+
Sbjct: 78 SVGAELDDVVEICSYLTNMNDFSQYNQVYAEFFDSSGPTRTTVAVHQLPHPHLVIEIKAV 137
Query: 123 AIK 125
A K
Sbjct: 138 AYK 140
>ref|NP_287015.1| (NC_002655) orf, hypothetical protein [Escherichia coli O157:H7
EDL933]
ref|NP_309283.1| (NC_002695) hypothetical protein [Escherichia coli O157:H7]
gb|AAG55626.1|AE005300_10 (AE005300) orf, hypothetical protein [Escherichia coli O157:H7
EDL933]
dbj|BAB34679.1| (AP002554) hypothetical protein [Escherichia coli O157:H7]
Length = 128
Score = 58.9 bits (141), Expect = 1e-08
Identities = 36/122 (29%), Positives = 55/122 (44%)
Query: 2 KEVIHSTLAPKAIGPYSQAIATNDLVFVSGQLGIDVSTGEFKGADIHSQTTQSMENIKAI 61
K VI + + P+ + +V+VSG L D D +QT +E I+ +
Sbjct: 3 KSVIIPAGSSAPLAPFVPGTLADGVVYVSGTLAFDQHNNVLFADDPKAQTRHVLETIRKV 62
Query: 62 LKEAGLGMDSVVKTTILLKSLDDFAVVNGIYGSYFTEPYPARATFQVAKLPKDALVEIEA 121
++ AG M V +I + ++A +N Y +F PAR Q + DALVEI
Sbjct: 63 IETAGGTMADVTFNSIFITDWKNYAAINETYAEFFPGDKPARFCIQCGLVKPDALVEIAT 122
Query: 122 IA 123
IA
Sbjct: 123 IA 124
>gb|AAL99341.1|AC116306_18 (AC116306) 2-AMINOMUCONATE DEAMINASE [Dictyostelium discoideum]
Length = 141
Score = 57.0 bits (136), Expect = 4e-08
Identities = 39/124 (31%), Positives = 59/124 (47%), Gaps = 11/124 (8%)
Query: 12 KAIGPYSQAIATNDLVFVSG---------QLGIDVSTGEFKGADIHSQTTQSMENIKAIL 62
+A+ Y D +FVSG G+ V +I QT +ENI+ IL
Sbjct: 15 RALANYPHMRKAGDFLFVSGISSRRPDNTYEGVHVDENGKVTLNIEQQTRAVIENIRTIL 74
Query: 63 KEAGLGMDSVVKTTILLKSLDDFAVVNGIYGSYF-TEPYPARATFQVAKLPK-DALVEIE 120
K AG +++++ T+ L + D+ N Y YF E P R T V +LP + L+EI+
Sbjct: 75 KSAGADLENIIDLTVFLVDMKDYNGFNLAYNDYFKIETGPTRTTVAVHQLPNPNLLIEIK 134
Query: 121 AIAI 124
A A+
Sbjct: 135 ATAL 138
>dbj|BAB03536.1| (AB020521) AmnE [Pseudomonas sp.]
Length = 142
Score = 56.6 bits (135), Expect = 5e-08
Identities = 38/124 (30%), Positives = 58/124 (46%), Gaps = 10/124 (8%)
Query: 12 KAIGPYSQAIATNDLVFVSGQ---------LGIDVSTGEFKGADIHSQTTQSMENIKAIL 62
K +G + D +FVSG +G + +I QT + + NI+ IL
Sbjct: 17 KPMGSFPHVKRAGDFLFVSGTSSRRPDNTFVGAEPDDTGRPRPNIELQTREVISNIRDIL 76
Query: 63 KEAGLGMDSVVKTTILLKSLDDFAVVNGIYGSYFTEPYPARATFQVAKLPKDALV-EIEA 121
+ G + VV+ L +++DFA N +Y +F PAR T V +LP LV EI+
Sbjct: 77 QSVGADLGDVVEVCSYLVNMNDFAAYNKVYAEFFDATGPARTTVAVHQLPHPQLVIEIKV 136
Query: 122 IAIK 125
+A K
Sbjct: 137 VAYK 140
>ref|NP_253990.1| (NC_002516) conserved hypothetical protein [Pseudomonas aeruginosa]
pir||G82982 conserved hypothetical protein PA5303 [imported] - Pseudomonas
aeruginosa (strain PAO1)
gb|AAG08688.1|AE004943_4 (AE004943) conserved hypothetical protein [Pseudomonas aeruginosa]
Length = 117
Score = 56.2 bits (134), Expect = 6e-08
Identities = 34/108 (31%), Positives = 58/108 (53%), Gaps = 8/108 (7%)
Query: 18 SQAIATNDLVFVSGQLGIDVSTGEFKGADIHSQTTQSMENIKAILKEAGLGMDSVVKTTI 77
SQ + N V+++GQ+G D+S G + QT +++ I+ +L+EAG ++ TI
Sbjct: 13 SQIVVHNGTVYLAGQVGEDMSAG------VEQQTRETLAAIERLLEEAGTDKTRILSVTI 66
Query: 78 LLKSLD-DFAVVNGIYGSYFTEPY-PARATFQVAKLPKDALVEIEAIA 123
LK +D DF +N ++ + PARAT + + LVE+ +A
Sbjct: 67 YLKDIDADFEGMNRVWDQWLPRGVAPARATVEAKLCEPEILVEMSVVA 114
>ref|NP_396162.1| (NC_003064) AGR_pAT_326p [Agrobacterium tumefaciens] [Agrobacterium
tumefaciens str. C58 (Cereon)]
ref|NP_535605.1| (NC_003306) translation initiation inhibitor [Agrobacterium
tumefaciens str. C58 (Dupont)] [Agrobacterium
tumefaciens str. C58 (U. Washington)]
gb|AAK90603.1| (AE007893) AGR_pAT_326p [Agrobacterium tumefaciens str. C58
(Cereon)]
gb|AAL45921.1| (AE008945) translation initiation inhibitor [Agrobacterium
tumefaciens str. C58 (U. Washington)]
Length = 130
Score = 56.2 bits (134), Expect = 6e-08
Identities = 36/110 (32%), Positives = 58/110 (52%), Gaps = 3/110 (2%)
Query: 16 PYSQAIATNDLVFVSGQLGIDVSTGEFKGADIHSQTTQSMENIKAILKEAGLGMDSVVKT 75
P+++A+ D V+VSGQ + GE +I +QT + + NI +L A + VVK
Sbjct: 22 PFAKAVRAGDFVYVSGQ--VPTFDGEIIVGNIVAQTERVIANIIEVLALAECTLADVVKV 79
Query: 76 TILLKSLDDFAVVNGIYGSYFTEPYPARATFQVAKLPKDALVEIEAIAIK 125
L DF+ N ++ +F + PAR+T Q + + D VE++ IA K
Sbjct: 80 NAWLDDARDFSSFNAVFQKHFIDHPPARSTVQ-SPMMVDVKVEMDVIAYK 128
>ref|NP_251813.1| (NC_002516) conserved hypothetical protein [Pseudomonas aeruginosa]
pir||A83256 conserved hypothetical protein PA3123 [imported] - Pseudomonas
aeruginosa (strain PAO1)
gb|AAG06511.1|AE004736_8 (AE004736) conserved hypothetical protein [Pseudomonas aeruginosa]
Length = 125
Score = 54.7 bits (130), Expect = 2e-07
Identities = 35/107 (32%), Positives = 52/107 (47%), Gaps = 2/107 (1%)
Query: 16 PYSQAIATNDLVFVSGQLGIDVSTGEFKGADIHSQTTQSMENIKAILKEAGLGMDSVVKT 75
P+S+A+ +F+SGQ+ + S GE DI +QT M I L+ G D +VK
Sbjct: 15 PFSRAVRAGGFLFLSGQVPMSPS-GEVVRGDIQTQTEAVMARIGETLESCGARFDQLVKV 73
Query: 76 TILLKSLDDFAVVNGIYGSYFTEPYPARATFQVA-KLPKDALVEIEA 121
T+ L + FA N +Y + P R+T L D VE++A
Sbjct: 74 TVWLSDMAHFAGFNEVYQRHVQGALPVRSTVTAGLALGVDVEVEVQA 120
>ref|NP_253770.1| (NC_002516) conserved hypothetical protein [Pseudomonas aeruginosa]
pir||E83010 conserved hypothetical protein PA5083 [imported] - Pseudomonas
aeruginosa (strain PAO1)
gb|AAG08468.1|AE004921_5 (AE004921) conserved hypothetical protein [Pseudomonas aeruginosa]
Length = 116
Score = 54.3 bits (129), Expect = 2e-07
Identities = 37/110 (33%), Positives = 56/110 (50%), Gaps = 9/110 (8%)
Query: 18 SQAIATNDLVFVSGQLGIDVSTGEFKGADIHSQTTQSMENIKAILKEAGLGMDSVVKTTI 77
S A+ + LVF+SGQ+ + DIH QT + + I A+L EAG + ++ TI
Sbjct: 13 SAAVCFDALVFLSGQV-------PGQAEDIHGQTREVLAKIDALLAEAGSRKERILSATI 65
Query: 78 LLKSL-DDFAVVNGIYGSYF-TEPYPARATFQVAKLPKDALVEIEAIAIK 125
LK + DFA +N ++ + T P+R T Q LVEI +A +
Sbjct: 66 YLKDIARDFAALNEVWTQWLPTGQAPSRTTVQAELARPSVLVEITVVAAR 115
>dbj|BAC00795.1| (AB070454) orf5 [Rhodococcus sp. YK2]
Length = 133
Score = 53.9 bits (128), Expect = 3e-07
Identities = 38/110 (34%), Positives = 49/110 (44%), Gaps = 2/110 (1%)
Query: 16 PYSQAIATNDLVFVSGQLGIDVSTGEFKGADIHSQTTQSMENIKAILKEAGLGMDSVVKT 75
PYS A FVSG L +D + G +M ++ L G + VVKT
Sbjct: 12 PYSPAFEVAGFTFVSGALSVDENGVAVAGR--REALAAAMARLEERLATVGGRLTDVVKT 69
Query: 76 TILLKSLDDFAVVNGIYGSYFTEPYPARATFQVAKLPKDALVEIEAIAIK 125
T + + N Y + F EP PAR+ V LP A VEIEAIA +
Sbjct: 70 TYFVTDVTLRDEANTHYSAVFAEPRPARSFIGVDSLPYGATVEIEAIAYR 119
>ref|NP_630561.1| (NC_003888) conserved hypothetical protein [Streptomyces coelicolor
A3(2)]
pir||T35965 conserved hypothetical protein SC9C7.14c - Streptomyces coelicolor
emb|CAA22726.1| (AL035161) conserved hypothetical protein [Streptomyces coelicolor
A3(2)]
Length = 132
Score = 53.5 bits (127), Expect = 4e-07
Identities = 37/121 (30%), Positives = 56/121 (45%), Gaps = 6/121 (4%)
Query: 10 APKAIGPYSQ----AIATNDLVFVSGQLGIDVSTGEFKGADIHSQTTQSMENIKAILKEA 65
AP+ + P +Q + T V VSGQL +D D +Q Q EN++ L A
Sbjct: 9 APEGVAPAAQYTHVVLGTGRFVAVSGQLALDEDGKVVGEGDPAAQARQVFENLRRCLASA 68
Query: 66 GLGMDSVVKTTILLKSLDDFAVVNGIYGSYFTEP-YPARATFQVAKLPK-DALVEIEAIA 123
G D VVK T + + + + + + PA + QVA L + + L+EIEA A
Sbjct: 69 GAAFDDVVKLTFFVTDMANMGAIRAARAEHIPDDRLPAASAVQVAALVRPEFLMEIEAFA 128
Query: 124 I 124
+
Sbjct: 129 V 129
>ref|NP_437808.1| (NC_003078) putative translation initiation inhibitor protein
[Sinorhizobium meliloti]
emb|CAC49668.1| (AL603646) putative translation initiation inhibitor protein
[Sinorhizobium meliloti]
Length = 130
Score = 53.1 bits (126), Expect = 5e-07
Identities = 38/126 (30%), Positives = 60/126 (47%), Gaps = 7/126 (5%)
Query: 3 EVIHSTLAPKAI----GPYSQAIATNDLVFVSGQLGIDVSTGEFKGADIHSQTTQSMENI 58
E+I + +AI P S ++ G ID+ TGE D+ +Q M+ +
Sbjct: 4 EIIEIPVISEAIRRLGAPTSALTRVGGFLYTCGMPPIDLKTGEIVRGDMTTQARACMDAL 63
Query: 59 KAILKEAGLGMDSVVKTTILLKSLDDFAVVNGIYGSYFTEPYPARATFQVAKLPKDAL-V 117
L+ AG +D+V K+ + + D A +N +Y +YF +PAR+ VA P +
Sbjct: 64 SFTLRHAGSSLDNVFKSLVFITDNDLAAEMNAVYRAYFPGGFPARSC--VAIKPWTYFDI 121
Query: 118 EIEAIA 123
EIE IA
Sbjct: 122 EIECIA 127
>ref|NP_541281.1| (NC_003318) TRANSLATION INITIATION INHIBITOR [Brucella melitensis]
gb|AAL53545.1| (AE009669) TRANSLATION INITIATION INHIBITOR [Brucella melitensis]
Length = 139
Score = 52.8 bits (125), Expect = 7e-07
Identities = 34/107 (31%), Positives = 52/107 (47%), Gaps = 7/107 (6%)
Query: 18 SQAIATNDLVFVSGQLGIDVSTGEFKGADIHSQTTQSMENIKAILKEAGLGMDSVVKTTI 77
SQA++ LV ++GQ+ D G I QT + I +LKEAG ++ +
Sbjct: 37 SQAVSYGGLVHIAGQVANDRKAG------IEEQTRDVLGKIDVLLKEAGTDRSKLLAVNV 90
Query: 78 LLKSLDDFAVVNGIYGSYF-TEPYPARATFQVAKLPKDALVEIEAIA 123
L ++ DF +N +Y ++ E PARA + D VE+ AIA
Sbjct: 91 FLPAIVDFDAMNAVYDAWIDAENPPARACVEARLADPDLRVEMTAIA 137
>ref|NP_523074.1| (NC_003296) CONSERVED HYPOTHETICAL PROTEIN [Ralstonia solanacearum]
emb|CAD18666.1| (AL646085) CONSERVED HYPOTHETICAL PROTEIN [Ralstonia solanacearum]
Length = 130
Score = 52.8 bits (125), Expect = 7e-07
Identities = 32/111 (28%), Positives = 52/111 (46%), Gaps = 1/111 (0%)
Query: 15 GPYSQAIATNDLVFVSGQLGIDVSTGEFKGADIHSQTTQSMENIKAILKEAGLGMDSVVK 74
G YS A N VFV+GQ+ + + A +Q Q ++N+ A+L G +V+
Sbjct: 17 GHYSHAACANGFVFVAGQIPVTPDGRKLVDAPFEAQVRQVLDNLDAVLAACGTDRTRLVQ 76
Query: 75 TTILLKSLD-DFAVVNGIYGSYFTEPYPARATFQVAKLPKDALVEIEAIAI 124
+ + ++ + + +Y + E PARA V L VEIEA A+
Sbjct: 77 VRVYVTDMETHWPAFDALYREWIGEVRPARAVVPVPTLHYGLAVEIEATAL 127
>ref|NP_384842.1| (NC_003047) CONSERVED HYPOTHETICAL PROTEIN [Sinorhizobium meliloti]
emb|CAC45308.1| (AL591784) CONSERVED HYPOTHETICAL PROTEIN [Sinorhizobium meliloti]
Length = 114
Score = 52.0 bits (123), Expect = 1e-06
Identities = 30/103 (29%), Positives = 56/103 (54%), Gaps = 8/103 (7%)
Query: 18 SQAIATNDLVFVSGQLGIDVSTGEFKGADIHSQTTQSMENIKAILKEAGLGMDSVVKTTI 77
SQA+ N+ V+++GQ+G G D+ +QT Q++ + +L AG ++ T+
Sbjct: 13 SQAVVYNNTVYLAGQVGN-------AGDDVVTQTKQALAEVDRLLALAGTDKTRILSATV 65
Query: 78 LLKSLDDFAVVNGIYGSYFTEPY-PARATFQVAKLPKDALVEI 119
L + DFA +N ++ ++ + + PARAT + + LVE+
Sbjct: 66 WLADMADFAKMNSVWDAWVPQGHAPARATGEAKLATPEYLVEV 108
>ref|NP_628558.1| (NC_003888) putative acetyltransferase [Streptomyces coelicolor
A3(2)]
emb|CAB95900.1| (AL359988) putative acetyltransferase [Streptomyces coelicolor
A3(2)]
Length = 291
Score = 50.8 bits (120), Expect = 3e-06
Identities = 40/123 (32%), Positives = 58/123 (46%), Gaps = 4/123 (3%)
Query: 2 KEVIHSTLAPKAIGPYSQAIATNDLVFVSGQLGIDVSTGEFKGADIHSQTTQSMENIKAI 61
+ V+ + + IG Y++A+ D V VSG G D +T G D+ Q Q + NI
Sbjct: 12 RAVVSGSTFEERIG-YARAVVDGDWVHVSGTTGFDYATMTISG-DVVEQAEQCLHNIATA 69
Query: 62 LKEAGLGMDSVVKTTILLKSLDDFAVVNGIYGSYFTEPYPARATFQVAKLPKDAL-VEIE 120
L EAG VV+ LL + +DF + F + PA AT V L + + +EIE
Sbjct: 70 LAEAGCTFADVVRVRYLLPAREDFEPCWPVLRRAFGQVRPA-ATMMVCGLADERMRIEIE 128
Query: 121 AIA 123
A
Sbjct: 129 VYA 131
>ref|NP_387285.1| (NC_003047) CONSERVED HYPOTHETICAL PROTEIN [Sinorhizobium meliloti]
emb|CAC47758.1| (AL591793) CONSERVED HYPOTHETICAL PROTEIN [Sinorhizobium meliloti]
Length = 126
Score = 49.3 bits (116), Expect = 8e-06
Identities = 33/109 (30%), Positives = 48/109 (43%), Gaps = 1/109 (0%)
Query: 17 YSQAIATNDLVFVSGQLGIDVSTGEFKGADIHSQTTQSMENIKAILKEAGLGMDSVVKTT 76
YS+A+A D FVSG G D +T + Q ++ I+ LKEAG + VV+
Sbjct: 18 YSRAVAKGDWCFVSGTTGYDYATMTMP-ETVEEQARNCLKTIEGALKEAGFSLSDVVRNH 76
Query: 77 ILLKSLDDFAVVNGIYGSYFTEPYPARATFQVAKLPKDALVEIEAIAIK 125
+ V I+G F E PA + + L+EIE A +
Sbjct: 77 YYVTDASFADRVFPIFGETFGEIRPAATMIVCDLIRPEMLIEIEVTAFR 125
>ref|NP_436902.1| (NC_003078) CONSERVED HYPOTHETICAL PROTEIN [Sinorhizobium meliloti]
emb|CAC48762.1| (AL603643) CONSERVED HYPOTHETICAL PROTEIN [Sinorhizobium meliloti]
Length = 126
Score = 48.9 bits (115), Expect = 1e-05
Identities = 29/86 (33%), Positives = 41/86 (46%)
Query: 39 TGEFKGADIHSQTTQSMENIKAILKEAGLGMDSVVKTTILLKSLDDFAVVNGIYGSYFTE 98
TGE DI Q Q N++ L+ AG + +VV+ + L D +N IY +F
Sbjct: 37 TGELVTGDIECQARQVFSNLRQALEAAGSTLAAVVQIQVYLIDRADAPGMNKIYREFFAP 96
Query: 99 PYPARATFQVAKLPKDALVEIEAIAI 124
P+P RAT L +EI A A+
Sbjct: 97 PFPVRATVVTELLSPGIRLEILATAV 122
>ref|NP_601422.1| (NC_003450) COG0251:Putative translation initiation inhibitor
[Corynebacterium glutamicum]
dbj|BAB99612.1| (AP005281) Putative translation initiation inhibitor
[Corynebacterium glutamicum ATCC 13032]
Length = 131
Score = 48.5 bits (114), Expect = 1e-05
Identities = 34/109 (31%), Positives = 50/109 (45%), Gaps = 2/109 (1%)
Query: 16 PYSQAIATNDLVFVSGQLGIDVSTGEFKGADIHSQTTQSMENIKAILKEAGLGMDSVVKT 75
PYS A + +FVSG L +D G ++E ++ L AG + VVK
Sbjct: 22 PYSPAKRVGNFIFVSGALSVDKDYQPVVGRK--EAVDAALERMRERLATAGGELKDVVKL 79
Query: 76 TILLKSLDDFAVVNGIYGSYFTEPYPARATFQVAKLPKDALVEIEAIAI 124
T + + N + +F E PAR+ + LP A VEI+AIA+
Sbjct: 80 TYFVTDISLREECNEQFREHFLEGRPARSFVGASSLPYGATVEIDAIAM 128
>ref|NP_254079.1| (NC_002516) conserved hypothetical protein [Pseudomonas aeruginosa]
pir||D82973 conserved hypothetical protein PA5392 [imported] - Pseudomonas
aeruginosa (strain PAO1)
gb|AAG08777.1|AE004951_11 (AE004951) conserved hypothetical protein [Pseudomonas aeruginosa]
Length = 140
Score = 48.5 bits (114), Expect = 1e-05
Identities = 33/107 (30%), Positives = 52/107 (47%), Gaps = 1/107 (0%)
Query: 19 QAIATNDLVFVSGQLGIDVSTGEFKGADIHSQTTQSMENIKAILKEAGLGMDSVVKTTIL 78
QA+ + V+V GQ+G D D +Q Q+M+N+K +L+EAG + +VKTT
Sbjct: 27 QAVRAGNTVYVRGQVGTDFDGNLVGLGDPRAQAEQAMKNVKQLLEEAGSDLSHIVKTTTY 86
Query: 79 LKSLDDFAVVNGIYGSYFTEPYPARATFQVAKLPKDA-LVEIEAIAI 124
L V G + +P V+ L + L+EI+ IA+
Sbjct: 87 LIDPRYREPVYREVGKWLKGVFPISTGLVVSALGQPQWLMEIDVIAV 133
>ref|NP_106096.1| (NC_002678) hypothetical protein [Mesorhizobium loti]
dbj|BAB51882.1| (AP003006) hypothetical protein [Mesorhizobium loti]
Length = 137
Score = 47.8 bits (112), Expect = 2e-05
Identities = 40/129 (31%), Positives = 61/129 (47%), Gaps = 6/129 (4%)
Query: 1 MKEVIHSTLAPKAIGPYSQAIATNDLVFVSGQLGIDVSTGEFKGADIHSQTTQSMENIKA 60
M E++ K +G + A L+FV GQ+G + +F+ D Q Q+++NI A
Sbjct: 1 MHEILQPEGWAKPVGYANGVAARGRLIFVGGQVGWNGQC-QFETDDFVGQVRQTLQNIVA 59
Query: 61 ILKEAGLGMDSVVKTTILLKSLDDF-AVVNGI---YGSYFTEPYPARATFQVAKLPKD-A 115
+L EAG + T ++ A + GI Y +PA A QV L +D A
Sbjct: 60 VLAEAGAEPRHITSMTWYFTDKAEYLANLRGIGEAYREVIGRHFPAMAAMQVMALVEDRA 119
Query: 116 LVEIEAIAI 124
VEI+A A+
Sbjct: 120 KVEIQATAV 128
>ref|NP_638622.1| (NC_003902) TdcF protein [Xanthomonas campestris pv. campestris
str. ATCC 33913]
gb|AAM42546.1| (AE012444) TdcF protein [Xanthomonas campestris pv. campestris str.
ATCC 33913]
Length = 167
Score = 47.4 bits (111), Expect = 3e-05
Identities = 48/142 (33%), Positives = 69/142 (47%), Gaps = 20/142 (14%)
Query: 3 EVIHSTLAPKAIGPYSQAI---ATNDLVFVSGQLGIDVSTGEFKGA-----DIHSQTTQS 54
EVI + P + P + A+ A V+VSG++ V T KG+ D ++QT
Sbjct: 26 EVIRHKI-PNSDFPIAAAVEVPAGKATVYVSGKVPAVVDTTAPKGSAAAYGDTNAQTISV 84
Query: 55 MENIKAILKEAGLGMDSVVKTTILL---KSLDDFAVVNGI---YGSYF---TEP-YPARA 104
+ IK L+ GLGM VVK + L ++D NG Y YF +P PAR+
Sbjct: 85 LAQIKQQLESLGLGMGDVVKMQVFLVGDPAMDGKMDFNGFMEGYRQYFGTKEQPNLPARS 144
Query: 105 TFQVAKLPKDAL-VEIEAIAIK 125
FQ+A L VEIE +A++
Sbjct: 145 AFQIAALGNPLYRVEIEVVAVR 166
>ref|NP_541256.1| (NC_003318) TRANSLATION INITIATION INHIBITOR [Brucella melitensis]
gb|AAL53520.1| (AE009666) TRANSLATION INITIATION INHIBITOR [Brucella melitensis]
Length = 128
Score = 46.6 bits (109), Expect = 5e-05
Identities = 29/103 (28%), Positives = 51/103 (49%), Gaps = 8/103 (7%)
Query: 18 SQAIATNDLVFVSGQLGIDVSTGEFKGADIHSQTTQSMENIKAILKEAGLGMDSVVKTTI 77
SQA+ + +++GQ+G GA + QT + ++ +LKE G +++ I
Sbjct: 27 SQAVIHGNTAYLAGQVGNP-------GASVTEQTKAVLAEVERLLKEVGSDKTKILQAII 79
Query: 78 LLKSLDDFAVVNGIYGSYFTEPY-PARATFQVAKLPKDALVEI 119
L + DFA +N ++ ++ + PARAT + D VEI
Sbjct: 80 WLADMKDFAEMNAVWDAWVDPAHTPARATGEAKLATPDYKVEI 122
>ref|NP_437242.1| (NC_003078) hypothetical membrane-anchored protein, similar to
putative translation initiation inhibitor [Sinorhizobium
meliloti]
emb|CAC49102.1| (AL603644) hypothetical membrane-anchored protein, similar to
putative translation initiation inhibitor [Sinorhizobium
meliloti]
Length = 127
Score = 46.2 bits (108), Expect = 7e-05
Identities = 36/125 (28%), Positives = 55/125 (43%), Gaps = 5/125 (4%)
Query: 2 KEVIHSTLAPKAIGPYSQAIATND---LVFVSGQLGIDVSTGEFKGADIHSQTTQSMENI 58
++ I++ AP+ G YSQA++ D ++FVSGQ I V++ + +Q Q N+
Sbjct: 3 RDNINALNAPQPRGGYSQAVSIEDFRRVLFVSGQ--IPVTSDDVVPEGFEAQARQVWLNV 60
Query: 59 KAILKEAGLGMDSVVKTTILLKSLDDFAVVNGIYGSYFTEPYPARATFQVAKLPKDALVE 118
A LK AG+ +VK T L I Y PA L+E
Sbjct: 61 DAQLKAAGMSKTDIVKVTTYLADRQHVMENREIRNDYLGSLAPAMTVVITGIFDSAWLME 120
Query: 119 IEAIA 123
+E +A
Sbjct: 121 VEVVA 125
>ref|NP_284187.1| (NC_003116) hypothetical protein NMA1463 [Neisseria meningitidis
Z2491]
pir||C81837 hypothetical protein NMA1463 [imported] - Neisseria meningitidis
(group A strain Z2491)
emb|CAB84697.1| (AL162756) hypothetical protein NMA1463 [Neisseria meningitidis
Z2491]
Length = 120
Score = 46.2 bits (108), Expect = 7e-05
Identities = 32/110 (29%), Positives = 54/110 (49%), Gaps = 8/110 (7%)
Query: 17 YSQAIATNDLVFVSGQLGIDVSTGEFKGADIHSQTTQSMENIKAILKEAGLGMDSVVKTT 76
YS+A+ N L+F+SG + + T + AD+ +Q I L E G V+
Sbjct: 12 YSEAVGANGLIFLSGMVPENGETAAEQTADVLAQ-------IDRWLAECGSDKAHVLDAV 64
Query: 77 ILLKSLDDFAVVNGIYGSYFTE-PYPARATFQVAKLPKDALVEIEAIAIK 125
I L+ + D+A +NG++ ++ PARA + + VEI+ A+K
Sbjct: 65 IYLRDMGDYAEMNGVWDAWVAAGRTPARACVEARLARPEWRVEIKITAVK 114
>ref|NP_274059.1| (NC_003112) conserved hypothetical protein [Neisseria meningitidis
MC58]
pir||H81129 conserved hypothetical protein NMB1025 [imported] - Neisseria
meningitidis (group B strain MD58)
gb|AAF41425.1| (AE002453) conserved hypothetical protein [Neisseria meningitidis
MC58]
Length = 120
Score = 46.2 bits (108), Expect = 7e-05
Identities = 32/110 (29%), Positives = 54/110 (49%), Gaps = 8/110 (7%)
Query: 17 YSQAIATNDLVFVSGQLGIDVSTGEFKGADIHSQTTQSMENIKAILKEAGLGMDSVVKTT 76
YS+A+ N L+F+SG + + T + AD+ +Q I L E G V+
Sbjct: 12 YSEAVGANGLIFLSGMVPENGETAAEQTADVLAQ-------IDRWLAECGSDKAHVLDAV 64
Query: 77 ILLKSLDDFAVVNGIYGSYFTE-PYPARATFQVAKLPKDALVEIEAIAIK 125
I L+ + D+A +NG++ ++ PARA + + VEI+ A+K
Sbjct: 65 IYLRDMGDYAEMNGVWDAWVAAGRTPARACVEARLARPEWRVEIKITAVK 114
>ref|NP_059745.1| (NC_002377) yja [Agrobacterium tumefaciens]
gb|AAF77148.1| (AF242881) yja [Agrobacterium tumefaciens]
Length = 140
Score = 45.4 bits (106), Expect = 1e-04
Identities = 32/109 (29%), Positives = 47/109 (42%), Gaps = 1/109 (0%)
Query: 17 YSQAIATNDLVFVSGQLGIDVSTGEFKGADIHSQTTQSMENIKAILKEAGLGMDSVVKTT 76
YS+ +A ++ ++VS G + T E D Q TQ NI+ L G + V+ +T
Sbjct: 19 YSRIVAVDNWIYVSNTAGRNYKTREMS-TDPVEQATQCFNNIERALASVGASLKDVINST 77
Query: 77 ILLKSLDDFAVVNGIYGSYFTEPYPARATFQVAKLPKDALVEIEAIAIK 125
I + ++ D V G F PAR + VEIE A K
Sbjct: 78 IYIPNVADAPTVMAYVGERFRGIDPARTVLCTPLGNDEFKVEIEVQAYK 126
>ref|NP_217220.1| (NC_000962) hypothetical protein Rv2704 [Mycobacterium tuberculosis
H37Rv]
ref|NP_337279.1| (NC_002755) conserved hypothetical protein [Mycobacterium
tuberculosis CDC1551]
pir||C70531 hypothetical protein Rv2704 - Mycobacterium tuberculosis (strain
H37RV)
emb|CAB09464.1| (Z96072) hypothetical protein Rv2704 [Mycobacterium tuberculosis
H37Rv]
gb|AAK47093.1| (AE007107) conserved hypothetical protein [Mycobacterium
tuberculosis CDC1551]
Length = 142
Score = 45.1 bits (105), Expect = 1e-04
Identities = 35/112 (31%), Positives = 55/112 (48%), Gaps = 10/112 (8%)
Query: 13 AIGPYSQAIATNDLVFVSGQLGIDVSTGEFKGADIHSQTTQSMENIKAILKEAGLGMDSV 72
A+G YS+A+ LV V+G G G DI +QT ++ I+ L +AG + V
Sbjct: 17 AVG-YSRAVRIGPLVVVAGTTG--------SGDDIAAQTRDALRRIEIALGQAGATLADV 67
Query: 73 VKTTILLKSLDDFAVVNGIYGSYFTEPYPARATFQV-AKLPKDALVEIEAIA 123
V+T I + + + V ++ F + P + +V A + LVEIEA A
Sbjct: 68 VRTRIYVTDISRWREVGEVHAQAFGKIRPVTSMVEVTALIAPGLLVEIEADA 119
>ref|NP_252862.1| (NC_002516) conserved hypothetical protein [Pseudomonas aeruginosa]
pir||F83125 conserved hypothetical protein PA4173 [imported] - Pseudomonas
aeruginosa (strain PAO1)
gb|AAG07560.1|AE004833_11 (AE004833) conserved hypothetical protein [Pseudomonas aeruginosa]
Length = 132
Score = 45.1 bits (105), Expect = 1e-04
Identities = 29/88 (32%), Positives = 50/88 (55%), Gaps = 6/88 (6%)
Query: 17 YSQAIATNDLVFVSGQLGI-DVSTGEFKGADIHSQTTQSMENIKAILKEAGLGMDSVVKT 75
YS A+ ++ L+FVSGQ+G D + E ++ +Q ++ +N+ A+L AG G D V+
Sbjct: 21 YSPAVRSDGLLFVSGQVGSRDDGSPE---PELETQVRRAFDNLNAVLAAAGCGFDDVLDV 77
Query: 76 TILLKSLD-DFAVVNGIYGSYFTE-PYP 101
T+ + + +F + I Y+ E PYP
Sbjct: 78 TVFMVDAEANFERIWKIVPEYWGEAPYP 105
>gb|AAL02075.1|AF320254_5 (AF320254) hypothetical protein [Azoarcus evansii]
Length = 132
Score = 45.1 bits (105), Expect = 1e-04
Identities = 37/130 (28%), Positives = 59/130 (44%), Gaps = 10/130 (7%)
Query: 4 VIHSTLAPK---AIGPYSQAI-ATNDLVFVSGQLGIDVSTGEFKGADIHSQTTQSMENIK 59
++H + P+ A YS I A +FV GQ+G D F D+ Q +++N
Sbjct: 1 MVHKVIQPEGWAAPKGYSNGIEARGRQIFVGGQIGWDAQC-RFPSDDLVQQVFLALKNAI 59
Query: 60 AILKEAGLGMDSVVKTTILLKSLDDFAV----VNGIYGSYFTEPYPARATFQVAKLPKDA 115
+++ AG G + V + T L ++ + +Y +PA QVA L +DA
Sbjct: 60 DVVRSAGGGPEHVTRMTWYLVDKKEYVARLKEIGQVYREVMGRNFPAMTAVQVADLVEDA 119
Query: 116 L-VEIEAIAI 124
VEIE A+
Sbjct: 120 AKVEIEVTAV 129
>ref|NP_522874.1| (NC_003296) CONSERVED HYPOTHETICAL PROTEIN [Ralstonia solanacearum]
ref|NP_522905.1| (NC_003296) PUTATIVE TRANSMEMBRANE PROTEIN [Ralstonia solanacearum]
emb|CAD18466.1| (AL646084) CONSERVED HYPOTHETICAL PROTEIN [Ralstonia solanacearum]
emb|CAD18497.1| (AL646084) PUTATIVE TRANSMEMBRANE PROTEIN [Ralstonia solanacearum]
Length = 145
Score = 44.7 bits (104), Expect = 2e-04
Identities = 33/109 (30%), Positives = 52/109 (47%), Gaps = 4/109 (3%)
Query: 17 YSQAIATNDLVFVSGQLGIDVSTGEFKGADIHSQTTQSMENIKAILKEAGLGMDSVVKTT 76
Y+ A+A L+F++GQ+GI A + Q + + + AIL+ AGLG + +V+
Sbjct: 34 YAPAVAAGGLLFIAGQIGI--RADGTVPASVEEQIDLAFQRLGAILQAAGLGFEDLVELV 91
Query: 77 ILLKSLD-DFAVVNGIYGSYFTEPYPARATFQVAKLPKDA-LVEIEAIA 123
+D A Y E PA VA L + L+EI+A+A
Sbjct: 92 SYHVDVDRQLAAFRETKDRYIKEGAPAWTILGVAALARPTLLIEIKAVA 140
>ref|NP_628331.1| (NC_003888) hypothetical protein SCD84.21 [Streptomyces coelicolor
A3(2)]
emb|CAB88487.1| (AL353816) hypothetical protein SCD84.21 [Streptomyces coelicolor
A3(2)]
Length = 133
Score = 44.7 bits (104), Expect = 2e-04
Identities = 35/98 (35%), Positives = 48/98 (48%), Gaps = 5/98 (5%)
Query: 17 YSQAIATNDLVFVSGQLGIDVSTGEF-KGADIHSQTTQSMENIKAILKEAGLGMDSVVKT 75
YSQAI + +LV VSGQL D GEF G D +Q ++ N+ +L+ G + +V
Sbjct: 19 YSQAIGSGELVHVSGQLAFD-EAGEFPDGGDFAAQLRRTHANMDRVLEHYGATRNQIVSQ 77
Query: 76 TILLKSLDDF--AVVNGIYGSYFTEPYPARATFQVAKL 111
T + L AV G +YF E PA V +L
Sbjct: 78 TQYVVDLRQHAAAVARGNL-AYFGEHRPASTVLGVTEL 114
>ref|NP_293759.1| (NC_001263) conserved hypothetical protein [Deinococcus
radiodurans]
pir||A75567 conserved hypothetical protein - Deinococcus radiodurans (strain
R1)
gb|AAF09626.1|AE001867_1 (AE001867) conserved hypothetical protein [Deinococcus radiodurans]
Length = 157
Score = 44.3 bits (103), Expect = 2e-04
Identities = 36/111 (32%), Positives = 57/111 (50%), Gaps = 6/111 (5%)
Query: 17 YSQAIATNDLVFVSGQLGIDVSTGEFKGA-DIHSQTTQSMENIKAILKEAGLGMDSVVKT 75
YS+A+ ++V V+G GE G D + QT ++ I+ L++AG ++ VV+T
Sbjct: 45 YSRAVRVGNIVQVAGTTA--TVDGEVVGVGDAYWQTKVALGLIRQALEQAGARLEDVVRT 102
Query: 76 TILLKSLDDFAVVNGIYGSYFTEPYPARATFQVAKL--PKDALVEIEAIAI 124
+ + + + V +G F PA QVA L P+ LVEIEA A+
Sbjct: 103 RMYVPDISRWEQVGRAHGEVFGAIRPAATMVQVAALIDPRH-LVEIEAEAV 152
>ref|NP_595310.1| (NC_003423) conserved hypothetical protein [Schizosaccharomyces
pombe]
pir||T40556 hypothetical protein SPAC577.12 - fission yeast
(Schizosaccharomyces pombe)
emb|CAB54820.1| (AL110506) conserved hypothetical protein [Schizosaccharomyces
pombe]
Length = 606
Score = 43.9 bits (102), Expect = 3e-04
Identities = 35/112 (31%), Positives = 53/112 (47%), Gaps = 6/112 (5%)
Query: 10 APKAIGPYSQAIATNDLVFVSGQLGIDVSTGEFKGADIHSQTTQSMENIKAILKEAGLGM 69
AP IGPYSQ+I N +VF+SGQ+G+ S E K D + ++++ + K +G
Sbjct: 417 APANIGPYSQSICANGVVFISGQIGLIPSVMELKLHDKIFEMVLALQHANRVAKAMRVG- 475
Query: 70 DSVVKTTILLKSLDDFAVVNGIYGSYFT---EPYPARATFQVAKLPKDALVE 118
S++ + D V I+ Y E P V LP++A VE
Sbjct: 476 -SLIACLAYVCDSRDADCVVKIWSEYTKNTGESSPVLVAL-VDALPRNASVE 525
>ref|NP_049176.1| (NC_002033) unknown [Novosphingobium aromaticivorans]
pir||T31248 hypothetical protein 942 - Sphingomonas aromaticivorans plasmid
pNL1
gb|AAD03972.1| (AF079317) unknown [Novosphingobium aromaticivorans]
Length = 130
Score = 43.5 bits (101), Expect = 4e-04
Identities = 32/110 (29%), Positives = 47/110 (42%), Gaps = 3/110 (2%)
Query: 16 PYSQAIATNDLVFVSGQLGIDVSTGEFKGADIHSQTTQSMENIKAILKEAGLGMDSVVKT 75
P A LV G G+D TG Q + + IL++AG D V K
Sbjct: 16 PIPAASRVGSLVATGGVYGLDPETG-IVAETAEDQVRLTFWQLGRILEKAGGSFDDVAKM 74
Query: 76 TILLKSLDDFAVVNGIYGSYFTEPY--PARATFQVAKLPKDALVEIEAIA 123
T + S D ++N + FT+ PAR T LP D +++ +A+A
Sbjct: 75 TFYVASADLKPLINKYWLMEFTDEQSRPARHTLMYNSLPGDIVIQCDALA 124
>ref|NP_288245.1| (NC_002655) orf, hypothetical protein [Escherichia coli O157:H7
EDL933]
ref|NP_310545.1| (NC_002695) hypothetical protein [Escherichia coli O157:H7]
gb|AAG56798.1|AE005404_1 (AE005404) orf, hypothetical protein [Escherichia coli O157:H7
EDL933]
dbj|BAB35941.1| (AP002558) hypothetical protein [Escherichia coli O157:H7]
Length = 130
Score = 43.1 bits (100), Expect = 6e-04
Identities = 28/108 (25%), Positives = 50/108 (45%), Gaps = 8/108 (7%)
Query: 17 YSQAIATNDLVFVSGQLGIDVSTGEFKGADIHSQTTQSMENIKAILKEAGLGMDSVVKTT 76
+S + N+ ++ +G E AD QT ++ I A+L++ G S++ T
Sbjct: 28 WSDVVIHNNTLYYTG-------VPENLDADAFEQTANTLAQIDAVLEKQGSNKSSILDAT 80
Query: 77 ILLKSLDDFAVVNGIYGSYFTEPY-PARATFQVAKLPKDALVEIEAIA 123
I L +DFA +N + ++ + P R T Q + VEI+ +A
Sbjct: 81 IFLADKNDFAAMNKAWDAWVVAGHAPVRCTVQAGLMNPKYKVEIKIVA 128
>ref|NP_187098.1| (NM_111319) unknown protein [Arabidopsis thaliana]
gb|AAF63779.1| (AC022287) unknown protein [Arabidopsis thaliana]
Length = 715
Score = 43.1 bits (100), Expect = 6e-04
Identities = 36/139 (25%), Positives = 63/139 (44%), Gaps = 18/139 (12%)
Query: 2 KEVIH----STLAPKAIGPYSQAIATNDLVFVSGQLGIDVSTGEFKGADIHSQTTQSMEN 57
K V+H S AP IGPYSQA ++ ++GQLG+D T + ++ Q++ N
Sbjct: 409 KRVLHVQSISCWAPSCIGPYSQATLHQSVLHMAGQLGLDPPTMNLQTEGAIAELNQALTN 468
Query: 58 IKAILKEAGLGM-DSVVKTTILLKSLDDFAVVNGIYGSYFTEPYPARATFQVAK------ 110
+AI + + S + + + + N ++ + T A+++ +V
Sbjct: 469 SEAIAESFNCSISSSAILFVVFCSARTKQSERNQLHEKFVTFLGLAKSSRRVQNVLDPMF 528
Query: 111 -------LPKDALVEIEAI 122
LPK ALVE++ I
Sbjct: 529 LYILVPDLPKRALVEVKPI 547
>ref|NP_250259.1| (NC_002516) conserved hypothetical protein [Pseudomonas
aeruginosa]
pir||F83449 conserved hypothetical protein PA1568 [imported] - Pseudomonas
aeruginosa (strain PAO1)
gb|AAG04957.1|AE004585_5 (AE004585) conserved hypothetical protein [Pseudomonas
aeruginosa]
Length = 117
Score = 43.1 bits (100), Expect = 6e-04
Identities = 24/72 (33%), Positives = 37/72 (51%), Gaps = 6/72 (8%)
Query: 27 VFVSGQLGIDVSTGEFKGADIHSQTTQSMENIKAILKEAGLGMDSVVKTTILLKSLDDFA 86
V++ GQ+ D S DI QT Q +ENI +L+ G V+ ILL +D+A
Sbjct: 22 VYIGGQVADDPS------GDIQDQTRQILENIDRLLQSVGSDRGQVLSVRILLAHREDYA 75
Query: 87 VVNGIYGSYFTE 98
+N ++ +F E
Sbjct: 76 GLNQVWDQWFPE 87
>sp|P76258|YOAB_ECOLI Hypothetical protein yoaB
Length = 114
Score = 43.1 bits (100), Expect = 6e-04
Identities = 28/108 (25%), Positives = 50/108 (45%), Gaps = 8/108 (7%)
Query: 17 YSQAIATNDLVFVSGQLGIDVSTGEFKGADIHSQTTQSMENIKAILKEAGLGMDSVVKTT 76
+S + N+ ++ +G E AD QT ++ I A+L++ G S++ T
Sbjct: 12 WSDVVIHNNTLYYTG-------VPENLDADAFEQTANTLAQIDAVLEKQGSNKSSILDAT 64
Query: 77 ILLKSLDDFAVVNGIYGSYFTEPY-PARATFQVAKLPKDALVEIEAIA 123
I L +DFA +N + ++ + P R T Q + VEI+ +A
Sbjct: 65 IFLADKNDFAAMNKAWDAWVVAGHAPVRCTVQAGLMNPKYKVEIKIVA 112
>dbj|BAA15618.1| (D90825) ORF_ID:o334#2; similar to [SwissProt Accession Number
P52761] [Escherichia coli]
Length = 115
Score = 43.1 bits (100), Expect = 6e-04
Identities = 28/108 (25%), Positives = 50/108 (45%), Gaps = 8/108 (7%)
Query: 17 YSQAIATNDLVFVSGQLGIDVSTGEFKGADIHSQTTQSMENIKAILKEAGLGMDSVVKTT 76
+S + N+ ++ +G E AD QT ++ I A+L++ G S++ T
Sbjct: 13 WSDVVIHNNTLYYTG-------VPENLDADAFEQTANTLAQIDAVLEKQGSNKSSILDAT 65
Query: 77 ILLKSLDDFAVVNGIYGSYFTEPY-PARATFQVAKLPKDALVEIEAIA 123
I L +DFA +N + ++ + P R T Q + VEI+ +A
Sbjct: 66 IFLADKNDFAAMNKAWDAWVVAGHAPVRCTVQAGLMNPKYKVEIKIVA 113
>ref|NP_108436.1| (NC_002678) hypothetical protein [Mesorhizobium loti]
dbj|BAB53897.1| (AP003013) hypothetical protein [Mesorhizobium loti]
Length = 114
Score = 43.1 bits (100), Expect = 6e-04
Identities = 31/108 (28%), Positives = 53/108 (48%), Gaps = 9/108 (8%)
Query: 14 IGP-YSQAIATNDLVFVSGQLGIDVSTGEFKGADIHSQTTQSMENIKAILKEAGLGMDSV 72
+GP SQ + + V+++GQ+G G ++ SQT + I +L +AG +
Sbjct: 8 VGPRMSQIVIHGNTVYLAGQVGEP-------GGNVASQTRDILATIDELLAKAGTDKSKI 60
Query: 73 VKTTILLKSLDDFAVVNGIYGSYFTEPY-PARATFQVAKLPKDALVEI 119
V+ I L + FA +N + + + + PARAT + + LVEI
Sbjct: 61 VQAIIWLADMGTFAEMNSEWDKWVPQGHTPARATGEAKLAGPEYLVEI 108
>ref|NP_416323.1| (NC_000913) orf, hypothetical protein [Escherichia coli K12]
pir||A64942 hypothetical protein b1809 - Escherichia coli (strain K-12)
gb|AAC74879.1| (AE000275) orf, hypothetical protein [Escherichia coli K12]
Length = 130
Score = 43.1 bits (100), Expect = 6e-04
Identities = 28/108 (25%), Positives = 50/108 (45%), Gaps = 8/108 (7%)
Query: 17 YSQAIATNDLVFVSGQLGIDVSTGEFKGADIHSQTTQSMENIKAILKEAGLGMDSVVKTT 76
+S + N+ ++ +G E AD QT ++ I A+L++ G S++ T
Sbjct: 28 WSDVVIHNNTLYYTG-------VPENLDADAFEQTANTLAQIDAVLEKQGSNKSSILDAT 80
Query: 77 ILLKSLDDFAVVNGIYGSYFTEPY-PARATFQVAKLPKDALVEIEAIA 123
I L +DFA +N + ++ + P R T Q + VEI+ +A
Sbjct: 81 IFLADKNDFAAMNKAWDAWVVAGHAPVRCTVQAGLMNPKYKVEIKIVA 128
>ref|NP_435291.1| (NC_003037) conserved hypothetical protein [Sinorhizobium meliloti]
gb|AAK64703.1| (AE007199) conserved hypothetical protein [Sinorhizobium meliloti]
Length = 138
Score = 42.7 bits (99), Expect = 7e-04
Identities = 32/90 (35%), Positives = 44/90 (48%), Gaps = 10/90 (11%)
Query: 17 YSQAIATNDLVFVSGQLGIDVSTGEFKGADIHSQTTQSMENIKAILKEAGLGMDSVVKTT 76
YS AI + DL+FVSGQ+G S G D Q + +N++A L AG D +V T
Sbjct: 27 YSAAIRSGDLLFVSGQVG-SRSDGS-PEPDFGRQVQLAFDNLRATLNAAGCTFDDIVDVT 84
Query: 77 ILLKSLDD-----FAVVNGIYGSYFTEPYP 101
++ AV N ++G T PYP
Sbjct: 85 TFHTDPENQFETIMAVKNQVFG---TPPYP 111
>ref|NP_354480.1| (NC_003062) AGR_C_2721p [Agrobacterium tumefaciens] [Agrobacterium
tumefaciens str. C58 (Cereon)]
ref|NP_532165.1| (NC_003304) conserved hypothetical protein [Agrobacterium
tumefaciens str. C58 (U. Washington)]
gb|AAK87265.1| (AE008072) AGR_C_2721p [Agrobacterium tumefaciens str. C58
(Cereon)]
gb|AAL42481.1| (AE009107) conserved hypothetical protein [Agrobacterium
tumefaciens str. C58 (U. Washington)]
Length = 129
Score = 42.7 bits (99), Expect = 7e-04
Identities = 32/88 (36%), Positives = 43/88 (48%), Gaps = 6/88 (6%)
Query: 17 YSQAIATNDLVFVSGQLGIDV-STGEFKGADIHSQTTQSMENIKAILKEAGLGMDSVVK- 74
YS AI + DL+FVSGQ+G T E D Q + EN+KA L AG D +V
Sbjct: 21 YSAAIRSGDLLFVSGQVGSRADGTPE---PDFEQQVRLAFENLKATLAAAGCTFDDIVDV 77
Query: 75 TTILLKSLDDFAVVNGIYGSYFTE-PYP 101
TT + F + + F++ PYP
Sbjct: 78 TTFHTDPENQFGTIMTVKQEIFSKSPYP 105
>ref|NP_436434.1| (NC_003037) hypothetical protein [Sinorhizobium meliloti]
gb|AAK65846.1| (AE007304) hypothetical protein [Sinorhizobium meliloti]
Length = 126
Score = 42.4 bits (98), Expect = 0.001
Identities = 33/124 (26%), Positives = 58/124 (46%), Gaps = 3/124 (2%)
Query: 1 MKEVIHSTLAPKAIGPYSQAIATNDLVFVSGQLGIDVSTGEFKGADIHSQTTQSMENIKA 60
MK I + + + + Y++A+ V+VSG G D TG F + Q ++ +I
Sbjct: 1 MKNRIFAGVPSEEMAGYAKAVIVGTTVYVSGTTGRDPDTGNFPD-NAAQQARNALASIDK 59
Query: 61 ILKEAGLGMDSVVKTTILLKSLDDFAVVNGIYGSYFTEPYPARATFQVAKLP-KDALVEI 119
L++AG + + V + + + A V + G F + P +T + ++P A VEI
Sbjct: 60 ALRQAGGSLANAVVSRVYVVDQACAADVTAVLGEVFRDIRPT-STMLICEIPAPGAKVEI 118
Query: 120 EAIA 123
E A
Sbjct: 119 EITA 122
>ref|NP_405622.1| (NC_003143) conserved hypothetical protein [Yersinia pestis]
emb|CAC90882.1| (AJ414151) conserved hypothetical protein [Yersinia pestis]
Length = 114
Score = 42.4 bits (98), Expect = 0.001
Identities = 31/108 (28%), Positives = 50/108 (45%), Gaps = 8/108 (7%)
Query: 17 YSQAIATNDLVFVSGQLGIDVSTGEFKGADIHSQTTQSMENIKAILKEAGLGMDSVVKTT 76
+S A+ ND ++ + S E ADI +QT ++ I +L + G V+ T
Sbjct: 12 WSDAVIHNDTIYYT-------SVPENLDADITAQTANTLAAIDMMLHQLGSDKSRVLDAT 64
Query: 77 ILLKSLDDFAVVNGIYGSYFTE-PYPARATFQVAKLPKDALVEIEAIA 123
I L DFA +N + ++ + P R T + + D VEI+ IA
Sbjct: 65 IFLADKADFAGMNAAWDAWVVDGNAPVRCTVEAKLMNPDYKVEIKIIA 112
>ref|NP_102918.1| (NC_002678) hypothetical protein [Mesorhizobium loti]
dbj|BAB48704.1| (AP002997) hypothetical protein [Mesorhizobium loti]
Length = 127
Score = 42.4 bits (98), Expect = 0.001
Identities = 38/123 (30%), Positives = 55/123 (43%), Gaps = 10/123 (8%)
Query: 9 LAPKAIGP----YSQAI---ATNDLVFVSGQLGIDVSTGEFKGADIHSQTTQSMENIKAI 61
L PK+I P YS + A LV SGQ+ I + + D +Q NI+AI
Sbjct: 5 LTPKSIKPPFARYSHGVEVPAGKRLVLCSGQVAI--TADDQIPEDAGAQAELCFRNIEAI 62
Query: 62 LKEAGLGMDSVVKTTILLKSLDDFAVVNGIYGSYFTEPYPARATFQVAKLPK-DALVEIE 120
L EAGLG+ +V+ + + F+ P PA V+ + + VE+E
Sbjct: 63 LGEAGLGLADIVRINAYVTDRAHLRPYMDVRDRLFSSPAPASTLMIVSGFARAEFKVEVE 122
Query: 121 AIA 123
AIA
Sbjct: 123 AIA 125
>ref|NP_460509.1| (NC_003197) putative translation initiation inhibitor [Salmonella
typhimurium LT2]
gb|AAL20468.1| (AE008767) putative translation initiation inhibitor [Salmonella
typhimurium LT2]
Length = 129
Score = 42.0 bits (97), Expect = 0.001
Identities = 25/60 (41%), Positives = 31/60 (51%), Gaps = 2/60 (3%)
Query: 17 YSQAIATNDLVFVSGQLGIDVSTGEFKGADIHSQTTQSMENIKAILKEAGLGMDSVVKTT 76
YS AI + DL+FVSGQ+G T D Q + EN+KA L AG D +V T
Sbjct: 21 YSAAIRSGDLLFVSGQVG--SHTDGTPEPDFQKQVRLAFENLKATLTAAGCTFDDIVDVT 78
>ref|NP_662064.1| (NC_002932) conserved hypothetical protein [Chlorobium tepidum TLS]
gb|AAM72406.1| (AE012878) conserved hypothetical protein [Chlorobium tepidum TLS]
Length = 159
Score = 42.0 bits (97), Expect = 0.001
Identities = 41/134 (30%), Positives = 55/134 (40%), Gaps = 21/134 (15%)
Query: 11 PKAIGPYSQAIATNDLVFVSGQLGI-------DVSTGEFKGADIHSQTTQSME---NIKA 60
P A G Y A+ DL++ SGQL + G A+ T + N A
Sbjct: 19 PSAAGLYQPAVRIGDLIYTSGQLPLVGGKLMEPGGRGRVSEANEQEATKAARVAALNAVA 78
Query: 61 ILKEAGLGMDSV---VKTTILLKSLDDFA----VVNG----IYGSYFTEPYPARATFQVA 109
+L+ +D+V VK TI + S D F V NG +Y + R V
Sbjct: 79 VLRSVTGNLDTVARIVKLTIYVSSADGFTNQHKVANGASELVYKIFGESGRHVRVAVGVL 138
Query: 110 KLPKDALVEIEAIA 123
LP DA VE+E IA
Sbjct: 139 ALPLDASVEVEMIA 152
>ref|NP_102732.1| (NC_002678) hypothetical protein [Mesorhizobium loti]
dbj|BAB48518.1| (AP002996) hypothetical protein [Mesorhizobium loti]
Length = 148
Score = 41.6 bits (96), Expect = 0.002
Identities = 32/113 (28%), Positives = 52/113 (45%), Gaps = 5/113 (4%)
Query: 17 YSQAIAT--NDLVFVSGQLGIDVSTGEFKGADIHSQTTQSMENIKAILKEAGLGMDSVVK 74
Y+Q + + LVFVSGQ D++ D +Q + N+ L+ AG + V K
Sbjct: 29 YTQVVVATGSKLVFVSGQQPEDINGKLVGHGDFAAQARLAFGNLGRALRAAGARPEQVCK 88
Query: 75 TTILL---KSLDDFAVVNGIYGSYFTEPYPARATFQVAKLPKDALVEIEAIAI 124
TI + K + ++ S F + PA VA + L+E++AIA+
Sbjct: 89 ITIYIVDYKRDEHVPIIEEAQISLFGDHKPANVVVGVAIMSPGYLIEVDAIAV 141
>ref|NP_105279.1| (NC_002678) hypothetical protein, putative acetyltransferase
[Mesorhizobium loti]
dbj|BAB51065.1| (AP003004) hypothetical protein [Mesorhizobium loti]
Length = 130
Score = 41.2 bits (95), Expect = 0.002
Identities = 36/126 (28%), Positives = 57/126 (44%), Gaps = 3/126 (2%)
Query: 1 MKEVIHSTLAPKAIGPYSQAIATNDLVFVSGQLGIDVSTGEFKGADIHSQTTQSMENIKA 60
M+++I + + YS+A+ D FVSG G D +T + +QT + I
Sbjct: 1 MRKLISTGSPFEKTAGYSRAVVQGDWCFVSGTTGYDYATMTMP-ETVEAQTRNCLATIGK 59
Query: 61 ILKEAGLGMDSVVKTTILLKSLDDFAVVNGIYGSYFTEPYPARATFQVAKLPKDAL-VEI 119
L + G + VV+ + VV I G F + PA AT V +L K + +EI
Sbjct: 60 ALADGGFEVADVVRAHYYITDQAFVDVVFPILGETFGDIRPA-ATMIVCQLNKPEMKIEI 118
Query: 120 EAIAIK 125
E A++
Sbjct: 119 EVTALR 124
>ref|NP_643731.1| (NC_003919) TdcF protein [Xanthomonas axonopodis pv. citri str.
306]
gb|AAM38267.1| (AE011988) TdcF protein [Xanthomonas axonopodis pv. citri str. 306]
Length = 167
Score = 40.8 bits (94), Expect = 0.003
Identities = 42/142 (29%), Positives = 63/142 (43%), Gaps = 20/142 (14%)
Query: 3 EVIHSTLAPKAIGPYSQAI---ATNDLVFVSGQLGIDVSTGEFKGA-----DIHSQTTQS 54
EVI + P + P + A+ A V+VSG++ + T K + D +QT
Sbjct: 26 EVIRHKI-PNSDFPIAAAVEIPAGKATVYVSGKVPAVIDTNAPKDSAAAYGDTKAQTVSV 84
Query: 55 MENIKAILKEAGLGMDSVVKTTILL-------KSLDDFAVVNG---IYGSYFTEPYPARA 104
+ IK L GLGM VVK + L +D + G +G+ PAR+
Sbjct: 85 LNQIKQQLTTLGLGMGDVVKMQVFLVGDPAMGGKMDFNGFMEGYRQFFGTKEQPNLPARS 144
Query: 105 TFQVAKLPKDAL-VEIEAIAIK 125
FQ+A L VEIE +A++
Sbjct: 145 AFQIAALGNPLYRVEIEVVAVR 166
>ref|NP_599534.1| (NC_003450) COG0251:Putative translation initiation inhibitor
[Corynebacterium glutamicum]
dbj|BAB97675.1| (AP005274) Putative translation initiation inhibitor
[Corynebacterium glutamicum ATCC 13032]
Length = 153
Score = 40.8 bits (94), Expect = 0.003
Identities = 45/135 (33%), Positives = 67/135 (49%), Gaps = 22/135 (16%)
Query: 7 STLAPKAIGPYSQAIATNDLVFVSGQL----GIDVSTGEFKGADIHSQTTQSMENIKAIL 62
S AP + Y AI T + V+ SGQL G +TG+ GA++ ++ + + A+
Sbjct: 17 SVAAP--VAAYVPAIQTGNQVWTSGQLPFVDGQLPATGKV-GAEVSAEDAEKLARAAALN 73
Query: 63 KEAGL----GMDSV---VKTTILLKSLDDF----AVVNG---IYGSYFTEPYP-ARATFQ 107
A + G+D V +K + S DDF AVVNG + G F E AR+
Sbjct: 74 ALAAIDALVGIDKVTRVLKIVGFVASADDFSGQPAVVNGASNLMGEVFGEAGAHARSAVG 133
Query: 108 VAKLPKDALVEIEAI 122
VA+LP ++ VE+E I
Sbjct: 134 VAELPLNSPVEVEVI 148
>ref|NP_243951.1| (NC_002570) BH3085~unknown conserved protein in others [Bacillus
halodurans]
dbj|BAB06804.1| (AP001517) BH3085~unknown conserved protein in others [Bacillus
halodurans]
Length = 128
Score = 40.8 bits (94), Expect = 0.003
Identities = 35/105 (33%), Positives = 50/105 (47%), Gaps = 9/105 (8%)
Query: 25 DLVFVSGQLGIDVSTGEFKGADIHSQTTQSMENIKAILKEAGLGMDSVVKTTILLKSLDD 84
+LV +SGQ+G D G+ DI SQ ++ENI+AIL G+ + ++ K + L D
Sbjct: 29 ELVVLSGQIGND-KNGDLP-TDIESQFVNALENIRAILHSEGVDLKNLFKINLWLTEDLD 86
Query: 85 FAVV----NGIYGSYFTEPYPARATFQVAKLPKDALVEIEAIAIK 125
A N +G Y P F A + +EIEA A K
Sbjct: 87 KAFFSERWNEFHGGY---PPTTTKAFVSALARPEIKIEIEAWAAK 128
>ref|NP_105360.1| (NC_002678) hypothetical protein [Mesorhizobium loti]
dbj|BAB51146.1| (AP003004) hypothetical protein [Mesorhizobium loti]
Length = 132
Score = 40.4 bits (93), Expect = 0.004
Identities = 32/113 (28%), Positives = 53/113 (46%), Gaps = 6/113 (5%)
Query: 17 YSQAIA---TNDLVFVSGQLGIDVSTGEFKGADIHSQTTQSMENIKAILKEAGLGMDSVV 73
YSQ +A + +V + GQ GID DI +QT Q++ N+ +L G + +V
Sbjct: 17 YSQGVALPASARIVLIGGQNGIDADGRIVGKGDIAAQTRQALANLAMVLDAGGARPEDLV 76
Query: 74 KTTILLKSLDDFAVVNGIYGSYFTE--PYPARATFQVAKLPK-DALVEIEAIA 123
+ +I + D G + +++ + P P +V L D L+EIE A
Sbjct: 77 RLSIYIVGDADIRPAFGAWMAFWADRGPPPVVTGIRVLGLANPDFLIEIEGQA 129
>ref|NP_456329.1| (NC_003198) conserved hypothetical protein [Salmonella enterica
subsp. enterica serovar Typhi]
emb|CAD05505.1| (AL627272) conserved hypothetical protein [Salmonella enterica
subsp. enterica serovar Typhi]
Length = 114
Score = 40.0 bits (92), Expect = 0.005
Identities = 23/80 (28%), Positives = 38/80 (46%), Gaps = 1/80 (1%)
Query: 45 ADIHSQTTQSMENIKAILKEAGLGMDSVVKTTILLKSLDDFAVVNGIYGSYFTEPY-PAR 103
AD QT ++ I A+L++ G ++ TI L DFA +N + ++ + P R
Sbjct: 33 ADAFEQTANTLAQIDAVLEKQGSSKSRILDATIFLSDKADFAAMNKAWDAWVVAGHAPVR 92
Query: 104 ATFQVAKLPKDALVEIEAIA 123
T Q + VEI+ +A
Sbjct: 93 CTVQAGLMNPKYKVEIKIVA 112
>ref|NP_419905.1| (NC_002696) transcriptional regulator, putative [Caulobacter
crescentus CB15]
gb|AAK23073.1| (AE005786) transcriptional regulator, putative [Caulobacter
crescentus CB15]
Length = 160
Score = 40.0 bits (92), Expect = 0.005
Identities = 39/115 (33%), Positives = 56/115 (47%), Gaps = 14/115 (12%)
Query: 25 DLVFVSGQLGI---DVSTGEFKGADIHSQTTQSMENIKAILKEAGLGMDSVVKTTILL-- 79
D+++VSG + D + G + D +QT + I+A LK G M VV +LL
Sbjct: 44 DMIYVSGMVPPVIDDKAVGVARFGDTKTQTLGVLARIEAALKSQGATMADVVMMRVLLVG 103
Query: 80 ----KSLDDFAVVNGIYGSYF---TEP-YPARATFQVAKLPKDA-LVEIEAIAIK 125
+ DFA + Y ++F +P PAR T Q++ L D LVEIE A K
Sbjct: 104 DPAKEGKMDFAGMMEGYRTHFGTAAQPNKPARITSQISGLVADGMLVEIEVQAAK 158
>ref|NP_460778.1| (NC_003197) putative translation initiation inhibitor [Salmonella
typhimurium LT2]
gb|AAL20737.1| (AE008781) putative translation initiation inhibitor [Salmonella
typhimurium LT2]
Length = 114
Score = 40.0 bits (92), Expect = 0.005
Identities = 23/80 (28%), Positives = 38/80 (46%), Gaps = 1/80 (1%)
Query: 45 ADIHSQTTQSMENIKAILKEAGLGMDSVVKTTILLKSLDDFAVVNGIYGSYFTEPY-PAR 103
AD QT ++ I A+L++ G ++ TI L DFA +N + ++ + P R
Sbjct: 33 ADAFEQTANTLAQIDAVLEKQGSSKSRILDATIFLSDKADFAAMNKAWDAWVVAGHAPVR 92
Query: 104 ATFQVAKLPKDALVEIEAIA 123
T Q + VEI+ +A
Sbjct: 93 CTVQAGLMNPKYKVEIKIVA 112
>ref|NP_347711.1| (NC_003030) Putative translation initiation inhibitor [Clostridium
acetobutylicum]
gb|AAK79051.1|AE007623_2 (AE007623) Putative translation initiation inhibitor [Clostridium
acetobutylicum]
Length = 118
Score = 39.7 bits (91), Expect = 0.006
Identities = 27/125 (21%), Positives = 58/125 (45%), Gaps = 9/125 (7%)
Query: 1 MKEVIHSTLAPKAIGPYSQAIATNDLVFVSGQLGIDVSTGEFKGADIHSQTTQSMENIKA 60
M+E+I + + + +S + D V++S + + +G I +Q + + +
Sbjct: 1 MREIIRTEIDKE--WAHSAIVEAGDYVYISYCM-------KNEGQSIENQINGAFDVLSE 51
Query: 61 ILKEAGLGMDSVVKTTILLKSLDDFAVVNGIYGSYFTEPYPARATFQVAKLPKDALVEIE 120
L++ GL + SVV+ L + + D + + I F YPAR ++ + +++
Sbjct: 52 RLEKIGLTLKSVVQMDCLFRDIKDLSFLGEIIKERFEGKYPARKAYETKFIRDGIAFQVD 111
Query: 121 AIAIK 125
AIA +
Sbjct: 112 AIAFR 116
>ref|NP_521600.1| (NC_003296) CONSERVED HYPOTHETICAL PROTEIN [Ralstonia solanacearum]
emb|CAD17190.1| (AL646076) CONSERVED HYPOTHETICAL PROTEIN [Ralstonia solanacearum]
Length = 130
Score = 39.7 bits (91), Expect = 0.006
Identities = 33/119 (27%), Positives = 52/119 (42%), Gaps = 6/119 (5%)
Query: 11 PKAIGPYSQAIATNDLVFVSGQLGIDVSTGEFKGADIHSQTTQSMENIKAILKEAGLGMD 70
P+ G + A ++FV+G +G D G F D+ Q Q+++NI +L E G
Sbjct: 10 PRPKGYANGVSARGRMIFVAGMIGWDAQ-GVFHTDDLAGQVRQALQNIVEVLAEGGAEPG 68
Query: 71 SVVKTTILLKSLDDFAVVNGIYGSYFTEPYP----ARATFQVAKLPKD-ALVEIEAIAI 124
+V+ T + + G F E A +V+ L +D A VEIE A+
Sbjct: 69 HIVRMTWYVTDKQAYIAAYTEIGQVFRELIGSFSIAMTAVEVSALVEDRAKVEIEVTAV 127
>ref|NP_404267.1| (NC_003143) putative translational inhibitor protein [Yersinia
pestis]
emb|CAC89482.1| (AJ414143) putative translational inhibitor protein [Yersinia
pestis]
Length = 134
Score = 39.7 bits (91), Expect = 0.006
Identities = 34/123 (27%), Positives = 61/123 (48%), Gaps = 8/123 (6%)
Query: 8 TLAPKAIGPYSQAIA--TNDLVFVSGQLGIDVSTGEFKGADIHSQTTQSMENIKAILKEA 65
T+ P +S A+ + + ++GQ+ + + G D+ +QT Q + N+K +L+ A
Sbjct: 10 TMYPSVPFGFSHAVEQLSGRTLHIAGQVAWNANGELVGGQDLLAQTQQVLANLKEVLRYA 69
Query: 66 GLGMDSVV--KTTILLKSLDDFAVVNGIYGSYFTEPYPARATF---QVAKLPKDALVEIE 120
G VV +T ++ S + A + G+++ PA +F Q LP + L+EIE
Sbjct: 70 GATPADVVRLRTYVVNHSPANLAAICAQIGAFYEGADPAANSFIGVQALALP-ELLIEIE 128
Query: 121 AIA 123
A A
Sbjct: 129 ATA 131
>ref|NP_302499.1| (NC_002677) conserved hypothetical protein [Mycobacterium leprae]
emb|CAC31820.1| (AL583925) conserved hypothetical protein [Mycobacterium leprae]
Length = 174
Score = 39.7 bits (91), Expect = 0.006
Identities = 47/135 (34%), Positives = 65/135 (47%), Gaps = 25/135 (18%)
Query: 11 PKAIGP---YSQAIATNDLVFVSGQLGID----VSTGEFKGADIHSQTTQSMENIKAILK 63
P+A P Y A+ T +LV+ SGQL I+ TG+ GAD+ +++ I A+
Sbjct: 38 PQAAPPLASYVSAVRTGNLVYTSGQLPIEDGRLPQTGKV-GADVSLGEGKALARICALNA 96
Query: 64 EAG----LGMDS---VVKTTILLKSLDDF----AVVNGIYGSYFTEPY-----PARATFQ 107
A +G+DS VVK + S F +VVNG F E + AR+
Sbjct: 97 LAAVDSLVGLDSVTGVVKVVGFVASSSGFNGQPSVVNGA-SDLFAEVFGDRGRHARSAVG 155
Query: 108 VAKLPKDALVEIEAI 122
VA+LP A VEIE I
Sbjct: 156 VAELPLGAPVEIELI 170
Database: /home/scwang/download_20020708_db/nr
Posted date: Aug 7, 2002 12:55 PM
Number of letters in database: 324,149,939
Number of sequences in database: 1,026,957
Lambda K H
0.316 0.133 0.359
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 70,102,647
Number of Sequences: 1026957
Number of extensions: 2453543
Number of successful extensions: 6447
Number of sequences better than 1.0e-02: 172
Number of HSP's better than 0.0 without gapping: 121
Number of HSP's successfully gapped in prelim test: 51
Number of HSP's that attempted gapping in prelim test: 6223
Number of HSP's gapped (non-prelim): 173
length of query: 125
length of database: 324,149,939
effective HSP length: 101
effective length of query: 24
effective length of database: 220,427,282
effective search space: 5290254768
effective search space used: 5290254768
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 90 (39.3 bits)