Xanthomonas campestris project

• about project

• Sort ATCC33913 genes by localization

• Sort Local genes by GeneID against ATCC33913 genes

• Contig & Gene Map

• Compare virulence genes in RS

• Compare genes in XF and RS

• Genome Alignment

• Orthologs Comparison

• COG gene classification

• RNAs(10X)

• List all contigs (10X)

• Orf - sort by Size(10X)

• Orf Blast results - sort by Sequence Identity (10X)

• Xcc proteins in Genbank

• Genes from Dr.Yang's Lab

• 2X and 5X annotation

• Two-component system

• BLAST(contig)

• Get DNA sequence

• Search SubDatabase (10X)

• Tools online

• Domain Analysis - Interproscan

• Structure Alignment - SARST

• Sort ATCC33913 genes by size

• New target list

• Homology Modeling Base

• Target list (10x)

• Target list for X-ray: Chan lab.