| GeneCode | GeneLocation | Strand | Length | PID in Genbank | GeneName | Protein | COG | TargetDB |
| HP0907 | 958119..959024 | + | 301 | 15645523 | - | hook assembly protein, flagella (flgD) | COG1843 | Search TargetDB |
| HP1133 | 1195705..1196610 | - | 301 | 15645747 | - | ATP synthase F1, subunit gamma (atpG) | COG0224 | Search TargetDB |
| HP0517 | 544336..545244 | + | 302 | 15645144 | - | GTP-binding protein (era) | COG1159 | Search TargetDB |
| HP0929 | 991805..992716 | + | 303 | 15645545 | - | geranyltranstransferase (ispA) | COG0142 | Search TargetDB |
| HP0960 | 1018460..1019371 | - | 303 | 15645576 | - | glycyl-tRNA synthetase, alpha subunit (glyQ) | COG0752 | Search TargetDB |
| HP1141 | 1202071..1202982 | - | 303 | 15645755 | - | methionyl-tRNA formyltransferase (fmt) | COG0223 | Search TargetDB |
| HP1454 | 1524949..1525860 | - | 303 | 15646063 | - | hypothetical protein | - | Search TargetDB |
| HP1421 | 1490990..1491904 | - | 304 | 15646030 | - | conjugative transfer regulon protein (trbB) | COG0630 | Search TargetDB |
| HP0638 | 684774..685691 | + | 305 | 15645262 | - | outer membrane protein (omp13) | - | Search TargetDB |
| HP0726 | 781184..782101 | - | 305 | 15645346 | - | hypothetical protein | - | Search TargetDB |
| HP0107 | 114500..115420 | - | 306 | 15644737 | - | cysteine synthetase (cysK) | COG0031 | Search TargetDB |
| HP0160 | 168882..169802 | + | 306 | 15644789 | - | conserved hypothetical secreted protein
Cysteine-rich protein D | COG0790 | Search TargetDB |
| HP0237 | 246629..247549 | - | 306 | 15644865 | - | porphobilinogen deaminase (hemC) | COG0181 | Search TargetDB |
| HP0538 | 569868..570788 | + | 306 | 15645164 | - | cag pathogenicity island protein (cag17) | - | Search TargetDB |
| HP0176 | 182781..183704 | + | 307 | 15644805 | - | fructose-bisphosphate aldolase (tsr) | COG0191 | Search TargetDB |
| HP0240 | 250646..251569 | - | 307 | 15644868 | - | octaprenyl-diphosphate synthase (ispB) | COG0142 | Search TargetDB |
| HP1084 | 1143527..1144450 | - | 307 | 15645698 | - | aspartate transcarbamoylase (pyrB) | COG0540 | Search TargetDB |
| HP1583 | 1661400..1662323 | + | 307 | 15646190 | - | pyridoxal phosphate biosynthetic protein A (pdxA) | COG1995 | Search TargetDB |
| HP0117 | 126861..127787 | + | 308 | 15644747 | - | conserved hypothetical protein | COG0731 | Search TargetDB |
| HP0423 | 438242..439168 | - | 308 | 15645051 | - | hypothetical protein | - | Search TargetDB |
| HP0707 | 761272..762198 | + | 308 | 15645330 | - | conserved hypothetical protein | COG0275 | Search TargetDB |
| HP1412 | 1482975..1483901 | + | 308 | 15646022 | - | hypothetical protein | - | Search TargetDB |
| HP1544 | 1622888..1623814 | - | 308 | 15646151 | - | toxR-activated gene (tagE) | COG0739 | Search TargetDB |
| HP0090 | 95897..96826 | - | 309 | 15644720 | - | malonyl coenzyme A-acyl carrier protein transacylase (fabD) | COG0331 | Search TargetDB |
| HP0045 | 43243..44175 | + | 310 | 15644676 | - | nodulation protein (nolK)
GDP-fucose synthetase | COG0451 | Search TargetDB |
| HP0393 | 403014..403949 | - | 311 | 15645021 | - | chemotaxis protein (cheV) | COG0835 | Search TargetDB |
| HP0825 | 877212..878147 | + | 311 | 15645444 | - | thioredoxin reductase (trxB) | COG0492 | Search TargetDB |
| HP0328 | 343588..344526 | - | 312 | 15644956 | - | conserved hypothetical protein | COG1663 | Search TargetDB |
| HP0557 | 591530..592468 | - | 312 | 15645182 | - | acetyl-coenzyme A carboxylase (accA) | COG0825 | Search TargetDB |
| HP0961 | 1019385..1020323 | - | 312 | 15645577 | - | glycerol-3-phosphate dehydrogenase, NAD(P)+ dependent | COG0240 | Search TargetDB |
| HP1121 | 1187005..1187943 | - | 312 | 15645735 | - | cytosine specific DNA methyltransferase (BSP6IM) | COG0270 | Search TargetDB |
| HP1543 | 1621941..1622879 | - | 312 | 15646150 | - | toxR-activated gene (tagE) | COG0739 | Search TargetDB |
| HP0616 | 661117..662058 | + | 313 | 15645241 | - | chemotaxis protein (cheV) | COG0784 | Search TargetDB |
| HP0852 | 903788..904729 | - | 313 | 15645471 | - | hypothetical protein | COG2958 | Search TargetDB |
| HP0096 | 100542..101486 | + | 314 | 15644726 | - | phosphoglycerate dehydrogenase | COG1052 | Search TargetDB |
| HP0485 | 508122..509066 | - | 314 | 15645112 | - | catalase-like protein | COG0753 | Search TargetDB |
| HP1055 | 1117255..1118199 | - | 314 | 15645669 | - | hypothetical protein | - | Search TargetDB |
| HP1111 | 1172352..1173296 | + | 314 | 15645725 | - | pyruvate ferredoxin oxidoreductase, beta subunit | COG1013 | Search TargetDB |
| HP1353 | 1413719..1414666 | - | 315 | 15646203 | - | hypothetical protein
Predicted adenine-specific DNA methylase
| - | Search TargetDB |
| HP1571 | 1651704..1652651 | - | 315 | 15646178 | - | rare lipoprotein A (rlpA) | COG0797 | Search TargetDB |
| HP1495 | 1568504..1569454 | + | 316 | 15646104 | - | transaldolase (tal) | COG0176 | Search TargetDB |
| HP0158 | 166660..167616 | + | 318 | 15644787 | - | hypothetical protein | - | Search TargetDB |
| HP0742 | 796774..797730 | + | 318 | 15645362 | - | phosphoribosylpyrophosphate synthetase (prsA) | COG0462 | Search TargetDB |
| HP1344 | 1403903..1404859 | - | 318 | 15645957 | - | magnesium and cobalt transport protein (corA) | COG0598 | Search TargetDB |
| HP0019 | 18380..19345 | + | 321 | 15644652 | - | chemotaxis protein (cheV) | COG0784 | Search TargetDB |
| HP0312 | 327976..328941 | + | 321 | 15644940 | - | conserved hypothetical ATP-binding protein | COG0523 | Search TargetDB |
| HP0554 | 588768..589733 | + | 321 | 15645179 | - | hypothetical protein | - | Search TargetDB |
| HP0768 | 820477..821442 | - | 321 | 15645387 | - | molybdenum cofactor biosynthesis protein A (moaA) | COG2896 | Search TargetDB |
| HP1399 | 1459926..1460894 | + | 322 | 15646009 | - | arginase (rocF) | COG0010 | Search TargetDB |
| HP0163 | 171427..172398 | - | 323 | 15644792 | - | delta-aminolevulinic acid dehydratase (hemB) | COG0113 | Search TargetDB |
| HP1549 | 1628275..1629246 | - | 323 | 15646156 | - | protein-export membrane protein (secF) | COG0341 | Search TargetDB |
| HP0582 | 613020..613994 | - | 324 | 15645207 | - | hypothetical protein | COG0810 | Search TargetDB |
| HP1164 | 1228455..1229429 | + | 324 | 15645778 | - | thioredoxin reductase (trxB) | COG0492 | Search TargetDB |
| HP0039m | 38472..39453 | + | 326 | 15646206 | - | Component of conjugal plasmid transfer system | COG3504 | Search TargetDB |
| HP0221 | 229524..230504 | + | 326 | 15644849 | - | nifU-like protein | COG0694 | Search TargetDB |
| HP0889 | 943114..944094 | - | 326 | 15645507 | - | iron(III) dicitrate ABC transporter, permease protein (fecD) | COG0609 | Search TargetDB |
| HP0927 | 990266..991246 | + | 326 | 15645543 | - | heat shock protein (htpX) | COG0501 | Search TargetDB |
| HP0271 | 280644..281627 | + | 327 | 15644899 | - | hypothetical protein | - | Search TargetDB |
| HP0745 | 800330..801313 | + | 327 | 15645364 | - | conserved hypothetical protein
Predicted ribosomal large subunit pseudouridine synthase D
| COG0564 | Search TargetDB |
| HP0854 | 906519..907502 | + | 327 | 15645473 | - | GMP reductase (guaC) | COG0516 | Search TargetDB |
| HP1576 | 1655611..1656594 | + | 327 | 15646183 | - | ABC transporter, ATP-binding protein (abc) | COG1135 | Search TargetDB |
| HP0142 | 153727..154713 | - | 328 | 15644772 | - | A/G-specific adenine glycosylase (mutY) | COG1194 | Search TargetDB |
| HP0280 | 287766..288752 | + | 328 | 15644908 | - | heat shock protein B (ibpB) | COG1560 | Search TargetDB |
| HP0403 | 415635..416621 | - | 328 | 15645031 | - | phenylalanyl-tRNA synthetase, alpha subunit (pheS) | COG0016 | Search TargetDB |
| HP0727 | 782071..783057 | - | 328 | 15645347 | - | transcriptional regulator, putative | COG0042 | Search TargetDB |
| HP1265 | 1336951..1337937 | + | 328 | 15645879 | - | hypothetical protein | - | Search TargetDB |
| HP0304 | 321928..322917 | + | 329 | 15644932 | - | hypothetical protein | - | Search TargetDB |
| HP0587 | 619045..620034 | + | 329 | 15645212 | - | aminodeoxychorismate lyase (pabC) | COG1559 | Search TargetDB |
| HP1193 | 1263775..1264764 | + | 329 | 15645807 | - | aldo-keto reductase, putative | COG0667 | Search TargetDB |
| HP1208 | 1285193..1286182 | - | 329 | 15645822 | - | ulcer associated adenine specific DNA methyltransferase | COG3392 | Search TargetDB |
| HP1267 | 1340465..1341454 | + | 329 | 15645881 | - | NADH-ubiquinone oxidoreductase, NQO8 subunit (NQO8) | COG1005 | Search TargetDB |
| HP1429 | 1498437..1499426 | - | 329 | 15646038 | - | polysialic acid capsule expression protein (kpsF) | COG0517 | Search TargetDB |
| HP1488 | 1560538..1561527 | - | 329 | 15646097 | - | conserved hypothetical secreted protein | COG0845 | Search TargetDB |
| HP0049 | 48291..49283 | - | 330 | 15644680 | - | hypothetical protein
Non-functional type II restriction endonuclease | COG2957 | Search TargetDB |
| HP0052 | 51272..52264 | - | 330 | 15644683 | - | hypothetical protein | - | Search TargetDB |
| HP0330 | 345554..346546 | + | 330 | 15644958 | - | ketol-acid reductoisomerase (ilvC) | COG0059 | Search TargetDB |
| HP0518 | 545241..546233 | + | 330 | 15645145 | - | conserved hypothetical secreted protein | COG3034 | Search TargetDB |
| HP0525 | 552472..553464 | - | 330 | 15645151 | - | virB11 homolog | COG0630 | Search TargetDB |
| HP0723 | 776481..777473 | - | 330 | 15645344 | - | L-asparaginase II (ansB) | COG0252 | Search TargetDB |
| HP0859 | 912291..913283 | - | 330 | 15645478 | - | ADP-L-glycero-D-mannoheptose-6-epimerase (rfaD) | COG0451 | Search TargetDB |
| HP1346 | 1406099..1407091 | - | 330 | 15645959 | - | glyceraldehyde-3-phosphate dehydrogenase (gap) | COG0057 | Search TargetDB |
| HP0202 | 206915..207910 | + | 331 | 15644831 | - | beta-ketoacyl-acyl carrier protein synthase III (fabH) | COG0332 | Search TargetDB |
| HP1077 | 1135905..1136900 | - | 331 | 15645691 | - | nickel transport protein (nixA) | COG3376 | Search TargetDB |
| HP1124 | 1189154..1190149 | - | 331 | 15645738 | - | hypothetical protein | - | Search TargetDB |
| HP0047 | 45041..46039 | - | 332 | 15644678 | - | hydrogenase expression/formation protein (hypE) | COG0309 | Search TargetDB |
| HP0921 | 978353..979351 | + | 332 | 15645537 | - | glyceraldehyde-3-phosphate dehydrogenase (gap) | COG0057 | Search TargetDB |
| HP0840 | 891482..892483 | + | 333 | 15645459 | - | flaA1 protein
UDP-GlcNAc C6 dehydratase/C4 reductase (previously annotated as putative sugar nucleotide biosynthesis)
| COG1086 | Search TargetDB |
| HP1068 | 1126643..1127644 | + | 333 | 15645682 | - | ribosomal protein L11 methyltransferase (prmA) | COG2264 | Search TargetDB |
| HP1562 | 1643982..1644983 | - | 333 | 15646169 | - | iron(III) ABC transporter, periplasmic iron-binding protein (ceuE) | COG0614 | Search TargetDB |
| HP0036 | 35544..36548 | + | 334 | 15644669 | - | hypothetical protein | - | Search TargetDB |
| HP0299 | 317245..318249 | + | 334 | 15644927 | - | dipeptide ABC transporter, permease protein (dppB) | COG0601 | Search TargetDB |
| HP0376 | 384259..385263 | + | 334 | 15645004 | - | ferrochelatase (hemH) | COG0276 | Search TargetDB |
| HP1238 | 1312156..1313160 | + | 334 | 15645852 | - | aliphatic amidase (aimE)
Formamidase (previously annotated as a aliphatic amidase)
| COG0388 | Search TargetDB |
| HP0418 | 432852..433859 | + | 335 | 15645046 | - | hypothetical protein | - | Search TargetDB |
| HP1280 | 1355682..1356689 | - | 335 | 15646202 | trpD | anthranilate synthase component II | COG0547 | Search TargetDB |
| HP1561 | 1642774..1643781 | - | 335 | 15646168 | - | iron(III) ABC transporter, periplasmic iron-binding protein (ceuE) | COG0614 | Search TargetDB |
| HP0196 | 202543..203553 | + | 336 | 15644825 | - | UDP-3-0-(3-hydroxymyristoyl) glucosamine N-acyltransferase (lpxD) | COG1044 | Search TargetDB |
| HP0728 | 783151..784161 | - | 336 | 15645348 | - | conserved hypothetical protein | COG0037 | Search TargetDB |
| HP0812 | 865837..866847 | - | 336 | 15645431 | - | hypothetical protein | COG1565 | Search TargetDB |
| HP1059 | 1120723..1121733 | + | 336 | 15645673 | - | Holliday junction DNA helicase (ruvB) | COG2255 | Search TargetDB |
| HP1103 | 1164156..1165166 | + | 336 | 15645717 | - | glucokinase (glk) | COG0837 | Search TargetDB |
| HP1356 | 1417889..1418899 | - | 336 | 15645968 | - | quinolinate synthetase A (nadA) | COG0379 | Search TargetDB |
| HP1581 | 1659473..1660483 | - | 336 | 15646188 | - | methicillin resistance protein (llm) | COG0472 | Search TargetDB |
| HP0948 | 1009199..1010212 | - | 337 | 15645564 | - | hypothetical protein | - | Search TargetDB |
| HP0201 | 205874..206890 | + | 338 | 15644830 | - | fatty acid/phospholipid synthesis protein (plsX) | COG0416 | Search TargetDB |
| HP0251 | 260361..261377 | - | 338 | 15644879 | - | oligopeptide ABC transporter, permease protein (oppC) | COG1173 | Search TargetDB |
| HP0660 | 708530..709546 | + | 338 | 15645284 | - | hypothetical protein | - | Search TargetDB |
| HP1328 | 1387400..1388416 | + | 338 | 15645941 | - | cation efflux system protein (czcA) | COG0845 | Search TargetDB |
| HP1438 | 1509160..1510176 | + | 338 | 15646047 | - | conserved hypothetical lipoprotein | - | Search TargetDB |
| HP0294 | 311023..312042 | + | 339 | 15644922 | - | aliphatic amidase (aimE) | COG0388 | Search TargetDB |
| HP0581 | 611997..613016 | - | 339 | 15645206 | - | dihydroorotase (pyrC) | COG0418 | Search TargetDB |
| HP1253 | 1328909..1329928 | - | 339 | 15645867 | - | tryptophanyl-tRNA synthetase (trpS) | COG0180 | Search TargetDB |
| HP0178 | 184798..185820 | - | 340 | 15644807 | - | spore coat polysaccharide biosynthesis protein E | COG2089 | Search TargetDB |
| HP0279 | 286747..287769 | + | 340 | 15644907 | - | lipopolysaccharide heptosyltransferase-1 (rfaC) | COG0859 | Search TargetDB |
| HP0604 | 640268..641290 | + | 340 | 15645229 | - | uroporphyrinogen decarboxylase (hemE) | COG0407 | Search TargetDB |
| HP1247 | 1321749..1322771 | - | 340 | 15645861 | - | hypothetical protein
DNA polymerase III delta subunit
| COG1466 | Search TargetDB |
| HP1468 | 1538762..1539784 | - | 340 | 15646077 | - | branched-chain-amino-acid aminotransferase (ilvE) | COG0115 | Search TargetDB |
| HP1584 | 1662388..1663410 | + | 340 | 15646191 | - | sialoglycoprotease (gcp) | COG0533 | Search TargetDB |
| HP0364 | 373604..374629 | - | 341 | 15644992 | - | ribonucleoside diphosphate reductase, beta subunit (nrdB) | COG0208 | Search TargetDB |
| HP0246 | 254368..255396 | - | 342 | 15644874 | - | flagellar basal-body P-ring protein (flgI) | COG1706 | Search TargetDB |
| HP0699 | 751085..752113 | + | 342 | 15645322 | - | hypothetical protein | - | Search TargetDB |
| HP0283 | 291465..292496 | + | 343 | 15644911 | - | 3-dehydroquinate synthase (aroB) | COG0337 | Search TargetDB |
| HP0352 | 360759..361790 | + | 343 | 15644980 | - | flagellar motor switch protein (fliG) | COG1536 | Search TargetDB |
| HP0360 | 370160..371194 | + | 344 | 15644988 | - | UDP-glucose 4-epimerase | COG1087 | Search TargetDB |
| HP0804 | 858216..859250 | - | 344 | 15645423 | - | GTP cyclohydrolase II/3,4-dihydroxy-2-butanone 4-phosphate synthase (ribA, ribB) | COG0807 | Search TargetDB |
| HP1293 | 1367722..1368756 | - | 344 | 15645906 | - | DNA-directed RNA polymerase, alpha subunit (rpoA) | COG0202 | Search TargetDB |
| HP1505 | 1577937..1578971 | - | 344 | 15646114 | - | riboflavin biosynthesis protein (ribG) | COG0117 | Search TargetDB |
| HP0362 | 371917..372954 | - | 345 | 15644990 | - | conserved hypothetical integral membrane protein | COG0795 | Search TargetDB |
| HP1062 | 1123038..1124075 | + | 345 | 15645676 | - | S-adenosylmethionine:tRNA ribosyltransferase-isomerase (queA) | COG0809 | Search TargetDB |
| HP1189 | 1259619..1260659 | - | 346 | 15645803 | - | aspartate-semialdehyde dehydrogenase (asd) | COG0136 | Search TargetDB |
| HP1284 | 1360547..1361587 | - | 346 | 15645897 | - | conserved hypothetical protein | COG0859 | Search TargetDB |
| HP0153 | 162928..163971 | + | 347 | 15644782 | - | recombinase (recA) | COG0468 | Search TargetDB |
| HP0738 | 792978..794021 | + | 347 | 15645358 | - | D-alanine:D-alanine ligase A (ddlA) | COG1181 | Search TargetDB |
| HP1373 | 1437001..1438044 | - | 347 | 15645983 | - | rod shape-determining protein (mreB) | COG1077 | Search TargetDB |
| HP0258 | 267021..268067 | + | 348 | 15644886 | - | conserved hypothetical integral membrane protein | COG0750 | Search TargetDB |
| HP0567 | 598984..600030 | + | 348 | 15645192 | - | membrane protein | COG0628 | Search TargetDB |
| HP1042 | 1103156..1104202 | + | 348 | 15645656 | - | hypothetical protein | COG2404 | Search TargetDB |
| HP1104 | 1165328..1166374 | + | 348 | 15645718 | - | cinnamyl-alcohol dehydrogenase ELI3-2 (cad) | COG1064 | Search TargetDB |
| HP1251 | 1326081..1327127 | - | 348 | 15645865 | - | oligopeptide ABC transporter, permease protein (oppB) | COG0601 | Search TargetDB |
| HP1191 | 1262036..1263085 | + | 349 | 15645805 | - | ADP-heptose-lps heptosyltransferase II (rfaF) | COG0859 | Search TargetDB |
| HP0013 | 11587..12639 | + | 350 | 15644646 | - | hypothetical protein | COG0482 | Search TargetDB |
| HP1387 | 1448622..1449674 | + | 350 | 15645997 | - | DNA polymerase III epsilon subunit (dnaQ) | COG0847 | Search TargetDB |
| HP1461 | 1532694..1533746 | + | 350 | 15646070 | - | cytochrome c551 peroxidase | COG1858 | Search TargetDB |